MURA - ECOLI - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

MURA - UDP-N-acetylglucosamine 1-carboxyvinyltransferase

UniProt:	P0A749	Sequences: MDKFRVQGPTKLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDVDTSMKLLSQLGAKVERNGSVHIDARDVNVFCAPYDLVKTMRASIWALGPLVARFGQGQVSLPGGCTIGARPVDLHISGLEQLGATIKLEEGYVKASVDGRLKGAHIVMDKVSVGATVTIMCAATLAEGTTIIENAAREPEIVDTANFLITLGAKISGQGTDRIVIEGVERLGGGVYRVLPDRIETGTFLVAAAISRGKIICRNAQPDTLDAVLAKLRDAGADIEVGEDWISLDMHGKRPKAVNVRTAPHPAFPTDMQAQFTLLNLVAEGTGFITETVFENRFMHVPELSRMGAHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYERIEDKLRALGANIERVKGE	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG11358
Length:	419 (399)
Sequences:	7935 (4907)
Seq/√Len:	245.7

ECOLI - MURA AROA
BACSU - MURA1 MURA2 AROA
HALSA - AROA
SULSO - AROA

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
248_K	281_S	4.051	1.00
15_E	252_R	3.963	1.00
344_H	355_H	3.714	1.00
42_Q	225_V	3.387	1.00
155_H	183_E	3.169	1.00
248_K	283_D	3.100	1.00
179_T	216_E	3.095	1.00
250_I	281_S	3.027	1.00
401_R	404_D	3.006	1.00
42_Q	227_R	2.845	1.00
36_E	220_R	2.803	1.00
204_K	216_E	2.782	1.00
17_T	252_R	2.739	1.00
150_R	177_E	2.731	1.00
366_M	390_D	2.712	1.00
38_P	73_D	2.629	1.00
243_A	271_A	2.594	1.00
399_Y	405_K	2.591	1.00
320_T	355_H	2.560	1.00
40_E	225_V	2.556	1.00
198_L	203_A	2.524	1.00
112_P	118_G	2.517	1.00
244_I	378_L	2.402	1.00
288_R	318_E	2.396	1.00
157_V	183_E	2.383	1.00
155_H	181_I	2.383	1.00
364_Q	390_D	2.361	1.00
46_K	51_D	2.360	1.00
337_E	340_R	2.326	1.00
42_Q	69_S	2.312	1.00
55_K	58_S	2.290	1.00
249_I	409_L	2.251	1.00
240_V	313_L	2.248	1.00
65_E	71_H	2.196	1.00
364_Q	388_V	2.168	1.00
276_G	279_W	2.145	1.00
40_E	69_S	2.114	1.00
40_E	71_H	2.109	1.00
348_E	351_T	2.080	1.00
38_P	71_H	2.070	1.00
162_S	165_A	2.063	1.00
128_G	169_I	2.037	1.00
272_D	283_D	2.000	1.00
316_V	382_I	1.987	1.00
380_G	387_T	1.987	1.00
13_Q	248_K	1.968	1.00
179_T	214_V	1.959	1.00
293_N	324_T	1.941	1.00
359_K	384_E	1.939	1.00
337_E	376_L	1.933	1.00
170_M	195_A	1.925	1.00
135_T	148_D	1.899	1.00
322_F	353_I	1.877	1.00
32_A	39_V	1.807	1.00
63_K	73_D	1.799	1.00
25_A	44_V	1.773	1.00
338_L	343_A	1.744	1.00
250_I	276_G	1.729	1.00
123_D	127_S	1.727	1.00
30_F	53_S	1.711	1.00
153_G	176_A	1.706	1.00
56_L	86_L	1.676	1.00
312_L	375_S	1.665	1.00
99_P	168_T	1.645	1.00
343_A	360_L	1.634	1.00
346_E	355_H	1.618	1.00
290_K	318_E	1.613	1.00
127_S	131_Q	1.607	1.00
181_I	214_V	1.605	1.00
46_K	66_R	1.603	1.00
274_E	281_S	1.591	1.00
341_M	387_T	1.590	1.00
337_E	368_T	1.584	1.00
346_E	353_I	1.580	1.00
54_M	70_V	1.576	1.00
28_I	197_F	1.576	1.00
320_T	353_I	1.567	1.00
183_E	212_R	1.553	1.00
181_I	212_R	1.547	1.00
236_G	306_M	1.547	1.00
137_K	146_S	1.517	1.00
81_C	108_Q	1.500	1.00
54_M	64_V	1.493	1.00
341_M	363_A	1.491	1.00
203_A	221_L	1.486	1.00
106_Q	146_S	1.469	1.00
377_V	402_I	1.462	1.00
15_E	250_I	1.461	1.00
206_S	216_E	1.459	1.00
199_I	208_Q	1.446	1.00
29_L	57_L	1.445	1.00
293_N	322_F	1.436	1.00
239_L	263_L	1.435	1.00
250_I	279_W	1.432	1.00
152_K	177_E	1.430	1.00
335_V	345_A	1.429	1.00
37_E	223_G	1.421	1.00
406_L	411_A	1.408	1.00
365_V	376_L	1.405	1.00
333_M	347_I	1.401	1.00
229_L	258_T	1.390	1.00
335_V	347_I	1.375	1.00
264_A	267_R	1.367	1.00
208_Q	213_I	1.355	1.00
405_K	408_A	1.354	1.00
94_I	143_V	1.346	1.00
315_L	343_A	1.341	1.00
108_Q	144_K	1.334	1.00
58_S	64_V	1.332	1.00
326_T	330_N	1.318	1.00
116_T	119_A	1.317	1.00
333_M	336_P	1.305	1.00
126_I	138_L	1.304	1.00
341_M	379_A	1.304	1.00
314_N	321_G	1.291	1.00
62_A	72_I	1.290	1.00
85_D	110_S	1.274	1.00
241_A	381_C	1.269	1.00
239_L	251_C	1.266	1.00
29_L	54_M	1.257	1.00
319_G	356_G	1.256	1.00
28_I	228_V	1.255	1.00
193_D	226_Y	1.252	1.00
95_W	167_V	1.251	1.00
134_A	151_L	1.251	1.00
55_K	59_Q	1.251	1.00
201_L	224_G	1.249	1.00
291_A	321_G	1.249	1.00
41_I	228_V	1.244	1.00
311_T	323_I	1.241	1.00
65_E	73_D	1.240	1.00
366_M	391_R	1.239	1.00
199_I	204_K	1.235	1.00
18_I	251_C	1.233	1.00
274_E	283_D	1.227	1.00
330_N	333_M	1.226	1.00
108_Q	146_S	1.225	1.00
291_A	320_T	1.225	1.00
276_G	281_S	1.224	1.00
200_T	224_G	1.223	1.00
136_I	145_A	1.219	1.00
269_A	292_V	1.217	1.00
206_S	214_V	1.211	1.00
235_T	254_A	1.210	1.00
137_K	148_D	1.208	1.00
90_M	93_S	1.202	1.00
280_I	284_M	1.201	1.00
296_T	325_E	1.200	1.00
334_H	368_T	1.199	1.00
44_V	50_V	1.198	1.00
170_M	215_I	1.197	1.00
240_V	262_V	1.193	1.00
348_E	353_I	1.191	1.00
266_L	271_A	1.187	1.00
195_A	205_I	1.186	1.00
16_V	409_L	1.186	1.00
239_L	266_L	1.182	1.00
25_A	50_V	1.175	1.00
335_V	352_V	1.173	1.00
182_I	185_A	1.172	1.00
239_L	282_L	1.172	1.00
130_E	135_T	1.164	1.00
35_A	39_V	1.157	1.00
108_Q	148_D	1.155	1.00
177_E	219_E	1.140	1.00
373_S	395_I	1.136	1.00
17_T	253_N	1.129	1.00
238_F	399_Y	1.115	1.00
380_G	389_V	1.113	1.00
56_L	87_V	1.105	1.00
26_L	53_S	1.103	1.00
190_E	196_N	1.102	1.00
312_L	379_A	1.097	1.00
404_D	407_R	1.092	1.00
187_R	211_D	1.091	1.00
373_S	394_H	1.088	1.00
207_G	210_T	1.088	1.00
132_L	154_A	1.087	1.00
58_S	63_K	1.087	1.00
41_I	72_I	1.086	1.00
265_K	294_V	1.081	1.00
241_A	378_L	1.078	1.00
39_V	197_F	1.070	1.00
266_L	313_L	1.068	1.00
401_R	405_K	1.067	1.00
173_A	180_T	1.066	1.00
343_A	357_V	1.055	1.00
243_A	287_K	1.051	1.00
135_T	146_S	1.050	1.00
256_P	275_V	1.049	1.00
244_I	382_I	1.049	1.00
127_S	130_E	1.048	1.00
316_V	357_V	1.041	1.00
345_A	352_V	1.041	1.00
48_K	396_D	1.040	1.00
237_T	374_A	1.040	1.00
281_S	284_M	1.035	1.00
37_E	222_G	1.035	1.00
138_L	141_G	1.033	1.00
178_G	217_G	1.029	1.00
365_V	387_T	1.028	1.00
52_T	55_K	1.026	1.00
126_I	130_E	1.026	1.00
295_R	325_E	1.025	1.00
269_A	317_A	1.023	1.00
265_K	310_F	1.021	1.00
62_A	74_A	1.016	1.00
39_V	224_G	1.014	1.00
236_G	309_Q	1.013	1.00
52_T	88_K	1.001	1.00
332_F	352_V	1.001	1.00
267_R	275_V	0.999	1.00
12_L	241_A	0.994	1.00
361_S	384_E	0.986	1.00
167_V	194_T	0.984	1.00
195_A	208_Q	0.976	1.00
255_Q	258_T	0.972	1.00
32_A	72_I	0.972	1.00
153_G	177_E	0.966	1.00
240_V	266_L	0.964	1.00
265_K	268_D	0.959	1.00
363_A	387_T	0.956	1.00
147_V	150_R	0.954	1.00
106_Q	144_K	0.953	1.00
240_V	306_M	0.951	1.00
151_L	176_A	0.950	1.00
320_T	356_G	0.946	1.00
158_M	169_I	0.944	1.00
339_S	344_H	0.941	1.00
291_A	319_G	0.940	1.00
51_D	66_R	0.937	1.00
85_D	112_P	0.936	1.00
383_A	387_T	0.932	1.00
234_E	405_K	0.927	1.00
306_M	309_Q	0.922	1.00
314_N	323_I	0.919	1.00
14_G	409_L	0.919	1.00
391_R	394_H	0.918	1.00
124_L	160_K	0.908	1.00
110_S	146_S	0.903	1.00
232_R	262_V	0.902	1.00
246_R	284_M	0.899	1.00
44_V	70_V	0.893	1.00
340_R	363_A	0.893	1.00
226_Y	229_L	0.892	1.00
311_T	334_H	0.888	1.00
57_L	62_A	0.887	1.00
291_A	317_A	0.887	1.00
54_M	58_S	0.881	1.00
269_A	289_P	0.879	1.00
28_I	41_I	0.878	1.00
323_I	352_V	0.878	1.00
199_I	207_G	0.878	1.00
27_P	30_F	0.875	0.99
198_L	221_L	0.875	0.99
125_H	168_T	0.873	0.99
59_Q	83_P	0.873	0.99
336_P	368_T	0.872	0.99
381_C	411_A	0.868	0.99
315_L	357_V	0.866	0.99
156_I	159_D	0.861	0.99
35_A	223_G	0.848	0.99
311_T	352_V	0.847	0.99
227_R	253_N	0.847	0.99
267_R	272_D	0.846	0.99
115_C	370_L	0.846	0.99
315_L	338_L	0.845	0.99
190_E	232_R	0.844	0.99
360_L	363_A	0.842	0.99
317_A	321_G	0.842	0.99
37_E	74_A	0.839	0.99
43_N	227_R	0.837	0.99
332_F	347_I	0.833	0.99
241_A	411_A	0.833	0.99
261_A	264_A	0.832	0.99
174_T	203_A	0.832	0.99
289_P	317_A	0.832	0.99
367_A	373_S	0.832	0.99
284_M	289_P	0.830	0.99
245_S	284_M	0.828	0.99
135_T	149_G	0.821	0.99
18_I	238_F	0.821	0.99
284_M	287_K	0.820	0.99
196_N	200_T	0.818	0.99
197_F	201_L	0.816	0.99
30_F	100_L	0.815	0.99
38_P	74_A	0.813	0.99
159_D	265_K	0.813	0.99
99_P	171_C	0.813	0.99
101_V	134_A	0.812	0.99
58_S	66_R	0.810	0.99
18_I	235_T	0.810	0.99
126_I	136_I	0.808	0.99
127_S	159_D	0.807	0.99
208_Q	212_R	0.805	0.99
199_I	205_I	0.801	0.99
316_V	358_E	0.798	0.99
393_Y	396_D	0.797	0.99
244_I	316_V	0.796	0.99
24_A	197_F	0.792	0.99
124_L	159_D	0.789	0.99
153_G	180_T	0.789	0.99
273_I	282_L	0.788	0.99
197_F	224_G	0.786	0.99
34_L	100_L	0.785	0.99
263_L	267_R	0.783	0.99
309_Q	378_L	0.781	0.99
269_A	314_N	0.778	0.99
242_A	245_S	0.778	0.99
12_L	247_G	0.776	0.99
87_V	117_I	0.772	0.99
33_L	57_L	0.772	0.99
256_P	280_I	0.772	0.99
196_N	199_I	0.766	0.99
239_L	242_A	0.764	0.99
275_V	280_I	0.764	0.99
117_I	329_E	0.762	0.99
200_T	226_Y	0.762	0.99
153_G	178_G	0.761	0.99
392_I	395_I	0.759	0.99
174_T	221_L	0.758	0.99
66_R	70_V	0.757	0.99
367_A	389_V	0.755	0.98
269_A	313_L	0.755	0.98
261_A	299_H	0.754	0.98
16_V	251_C	0.754	0.98
94_I	122_V	0.753	0.98
311_T	354_C	0.753	0.98
362_G	387_T	0.752	0.98
235_T	251_C	0.749	0.98
380_G	406_L	0.749	0.98
179_T	217_G	0.749	0.98
28_I	226_Y	0.746	0.98
243_A	266_L	0.745	0.98
244_I	312_L	0.742	0.98
271_A	289_P	0.742	0.98
324_T	348_E	0.742	0.98
238_F	405_K	0.741	0.98
347_I	351_T	0.740	0.98
80_F	104_F	0.739	0.98
24_A	193_D	0.738	0.98
377_V	395_I	0.737	0.98
43_N	253_N	0.735	0.98
29_L	72_I	0.733	0.98
115_C	119_A	0.730	0.98
25_A	228_V	0.728	0.98
29_L	70_V	0.727	0.98
284_M	288_R	0.727	0.98
396_D	403_E	0.725	0.98
98_G	147_V	0.724	0.98
176_A	180_T	0.722	0.98
102_A	134_A	0.722	0.98
242_A	249_I	0.721	0.98
48_K	52_T	0.721	0.98
62_A	75_R	0.718	0.98
173_A	182_I	0.718	0.98
204_K	218_V	0.716	0.98
363_A	385_G	0.715	0.98
19_S	234_E	0.712	0.98
239_L	243_A	0.712	0.98
36_E	222_G	0.711	0.98
17_T	43_N	0.711	0.98
132_L	156_I	0.710	0.98
262_V	306_M	0.708	0.98
19_S	405_K	0.706	0.98
124_L	161_V	0.706	0.98
32_A	74_A	0.705	0.98
54_M	72_I	0.705	0.98
199_I	206_S	0.703	0.98
85_D	118_G	0.703	0.98
242_A	284_M	0.703	0.98
169_I	182_I	0.703	0.98
324_T	351_T	0.701	0.98
87_V	111_L	0.700	0.98
31_A	197_F	0.698	0.97
58_S	65_E	0.696	0.97
111_L	143_V	0.692	0.97
21_A	25_A	0.692	0.97
296_T	307_Q	0.692	0.97
160_K	327_V	0.691	0.97
98_G	125_H	0.690	0.97
308_A	372_A	0.689	0.97
341_M	365_V	0.687	0.97
193_D	196_N	0.686	0.97
93_S	397_R	0.685	0.97
12_L	411_A	0.685	0.97
292_V	321_G	0.684	0.97
243_A	289_P	0.682	0.97
80_F	106_Q	0.680	0.97
158_M	161_V	0.680	0.97
158_M	182_I	0.679	0.97
241_A	406_L	0.675	0.97
151_L	178_G	0.669	0.97
321_G	354_C	0.667	0.97
20_G	228_V	0.666	0.97
164_G	191_I	0.665	0.97
263_L	275_V	0.664	0.97
57_L	97_L	0.663	0.97
295_R	324_T	0.662	0.97
341_M	360_L	0.661	0.97
117_I	143_V	0.660	0.96
82_A	87_V	0.660	0.96
275_V	279_W	0.658	0.96
237_T	309_Q	0.656	0.96
265_K	292_V	0.656	0.96
39_V	223_G	0.656	0.96
57_L	64_V	0.656	0.96
98_G	111_L	0.651	0.96
172_A	176_A	0.651	0.96
188_E	192_V	0.650	0.96
95_W	164_G	0.650	0.96
315_L	358_E	0.649	0.96
331_R	369_D	0.646	0.96
156_I	182_I	0.646	0.96
236_G	262_V	0.646	0.96
101_V	109_V	0.645	0.96
11_K	247_G	0.645	0.96
24_A	27_P	0.644	0.96
129_L	134_A	0.643	0.96
344_H	357_V	0.642	0.96
196_N	226_Y	0.641	0.96
84_Y	118_G	0.641	0.96
97_L	129_L	0.639	0.96
403_E	407_R	0.636	0.96
94_I	111_L	0.635	0.96
341_M	383_A	0.635	0.96
246_R	287_K	0.634	0.96
152_K	178_G	0.632	0.96
238_F	402_I	0.631	0.95
16_V	405_K	0.631	0.95
308_A	334_H	0.630	0.95
25_A	45_P	0.629	0.95
381_C	406_L	0.629	0.95
312_L	376_L	0.628	0.95
283_D	286_G	0.626	0.95
170_M	213_I	0.625	0.95
201_L	221_L	0.624	0.95
242_A	251_C	0.623	0.95
74_A	103_R	0.623	0.95
199_I	203_A	0.621	0.95
122_V	126_I	0.618	0.95
122_V	143_V	0.618	0.95
242_A	247_G	0.616	0.95
87_V	93_S	0.616	0.95
362_G	383_A	0.615	0.95
38_P	223_G	0.615	0.95
230_P	251_C	0.614	0.95
33_L	62_A	0.613	0.95
368_T	372_A	0.611	0.95
263_L	273_I	0.609	0.95
395_I	403_E	0.608	0.94
48_K	51_D	0.606	0.94
240_V	309_Q	0.605	0.94
120_R	331_R	0.605	0.94
87_V	94_I	0.603	0.94
27_P	95_W	0.602	0.94
311_T	335_V	0.602	0.94
139_E	144_K	0.602	0.94
138_L	145_A	0.599	0.94
120_R	371_R	0.598	0.94
36_E	74_A	0.597	0.94
124_L	127_S	0.597	0.94
158_M	188_E	0.596	0.94
332_F	351_T	0.596	0.94
340_R	366_M	0.595	0.94
291_A	318_E	0.595	0.94
170_M	182_I	0.591	0.94
150_R	176_A	0.590	0.94
268_D	298_P	0.588	0.93
101_V	129_L	0.588	0.93
339_S	345_A	0.587	0.93
130_E	136_I	0.587	0.93
101_V	111_L	0.587	0.93
35_A	74_A	0.586	0.93
318_E	358_E	0.586	0.93
322_F	348_E	0.586	0.93
66_R	69_S	0.585	0.93
267_R	273_I	0.585	0.93
377_V	403_E	0.583	0.93
197_F	226_Y	0.581	0.93
312_L	315_L	0.580	0.93
46_K	70_V	0.579	0.93
367_A	394_H	0.579	0.93
296_T	310_F	0.579	0.93
51_D	55_K	0.577	0.93
336_P	339_S	0.575	0.93
26_L	30_F	0.575	0.93
16_V	238_F	0.575	0.93
325_E	329_E	0.575	0.93
123_D	141_G	0.572	0.93
336_P	366_M	0.571	0.92
8_G	11_K	0.571	0.92
139_E	142_Y	0.570	0.92
334_H	372_A	0.568	0.92
238_F	406_L	0.568	0.92
35_A	201_L	0.567	0.92
244_I	313_L	0.566	0.92
373_S	403_E	0.566	0.92
192_V	195_A	0.565	0.92
130_E	137_K	0.565	0.92
56_L	97_L	0.565	0.92
26_L	93_S	0.565	0.92
207_G	211_D	0.564	0.92
362_G	380_G	0.564	0.92
315_L	360_L	0.563	0.92
132_L	180_T	0.563	0.92
271_A	282_L	0.563	0.92
245_S	381_C	0.563	0.92
37_E	73_D	0.562	0.92
60_L	101_V	0.561	0.92
105_G	150_R	0.558	0.92
340_R	376_L	0.558	0.92
404_D	408_A	0.556	0.91
130_E	140_E	0.555	0.91
265_K	299_H	0.554	0.91
193_D	229_L	0.554	0.91
315_L	382_I	0.552	0.91
59_Q	84_Y	0.551	0.91
254_A	258_T	0.551	0.91
312_L	338_L	0.550	0.91
339_S	346_E	0.549	0.91
130_E	138_L	0.549	0.91
168_T	172_A	0.548	0.91
392_I	403_E	0.546	0.91
92_A	96_A	0.546	0.91
89_T	114_G	0.545	0.91
45_P	234_E	0.545	0.91
307_Q	323_I	0.545	0.91
174_T	218_V	0.545	0.91
294_V	310_F	0.544	0.91
180_T	217_G	0.543	0.90
334_H	394_H	0.542	0.90
272_D	287_K	0.542	0.90
128_G	132_L	0.541	0.90
67_N	71_H	0.541	0.90
292_V	317_A	0.538	0.90
18_I	230_P	0.538	0.90
173_A	198_L	0.538	0.90
252_R	279_W	0.538	0.90
203_A	218_V	0.538	0.90
233_I	370_L	0.537	0.90
295_R	326_T	0.536	0.90
19_S	400_E	0.534	0.90
323_I	354_C	0.534	0.90
62_A	77_V	0.534	0.90
254_A	280_I	0.533	0.90
311_T	345_A	0.533	0.90
239_L	273_I	0.533	0.90
151_L	172_A	0.532	0.90
125_H	128_G	0.532	0.90
343_A	379_A	0.529	0.89
242_A	271_A	0.528	0.89
204_K	219_E	0.527	0.89
307_Q	332_F	0.527	0.89
21_A	229_L	0.526	0.89
56_L	96_A	0.525	0.89
374_A	402_I	0.525	0.89
12_L	249_I	0.525	0.89
272_D	275_V	0.524	0.89
124_L	162_S	0.524	0.89
64_V	70_V	0.524	0.89
95_W	328_F	0.522	0.89
269_A	321_G	0.522	0.89
98_G	168_T	0.521	0.89
247_G	284_M	0.521	0.89
22_K	120_R	0.520	0.89
126_I	145_A	0.519	0.88
216_E	219_E	0.519	0.88
242_A	246_R	0.519	0.88
192_V	213_I	0.518	0.88
131_Q	156_I	0.518	0.88
291_A	356_G	0.518	0.88
246_R	283_D	0.518	0.88
334_H	397_R	0.517	0.88
192_V	207_G	0.517	0.88
360_L	383_A	0.516	0.88
312_L	316_V	0.515	0.88
195_A	213_I	0.515	0.88
297_A	325_E	0.515	0.88
164_G	167_V	0.514	0.88
26_L	398_G	0.514	0.88
264_A	268_D	0.514	0.88
131_Q	157_V	0.512	0.88
198_L	201_L	0.510	0.88
39_V	201_L	0.510	0.88
37_E	224_G	0.509	0.87
332_F	335_V	0.508	0.87
263_L	280_I	0.508	0.87
75_R	79_V	0.508	0.87
314_N	354_C	0.505	0.87
207_G	213_I	0.504	0.87
30_F	57_L	0.504	0.87
203_A	219_E	0.503	0.87
138_L	142_Y	0.503	0.87
196_N	208_Q	0.503	0.87
117_I	328_F	0.501	0.87
18_I	254_A	0.500	0.87
322_F	351_T	0.500	0.87

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3rmtA	4	0.9809	100	0.129	Contact Map
2pqcA	1	0.9785	100	0.166	Contact Map
3slhA	4	0.9785	100	0.177	Contact Map
3zh4A	1	0.9761	100	0.184	Contact Map
3r38A	2	0.9905	100	0.185	Contact Map
1ejdA	4	0.9976	100	0.189	Contact Map
1rf6A	1	0.9618	100	0.201	Contact Map
5bq2A	4	0.9952	100	0.203	Contact Map
4fqdA	2	0.9761	100	0.204	Contact Map
2yvwA	1	0.9881	100	0.208	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0123 seconds.