HEM1 - ECOLI - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

HEM1 - Glutamyl-tRNA reductase

UniProt:	P0A6X1	Sequences: MTLLALGINHKTAPVSLRERVSFSPDKLDQALDSLLAQPMVQGGVVLSTCNRTELYLSVEEQDNLQEALIRWLCDYHNLNEEDLRKSLYWHQDNDAVSHLMRVASGLDSLVLGEPQILGQVKKAFADSQKGHMKASELERMFQKSFSVAKRVRTETDIGASAVSVAFAACTLARQIFESLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQILADEVGAEVIALSDIDERLREADIIISSTASPLPIIGKGMVERALKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRKAAAVEAETIVAQETSEFMAWLRAQSASETIREYRSQAEQVRDELTAKALAALEQGGDAQAIMQDLAWKLTNRLIHAPTKSLQQAARDGDNERLNILRDSLGLE	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG10427
Length:	418 (408)
Sequences:	2586 (1734)
Seq/√Len:	85.8

ECOLI - HEM1
BACSU - HEM1
HALSA - HEM1
SULSO - HEM1

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
102_R	322_E	6.754	1.00
276_L	285_V	6.532	1.00
151_R	155_E	4.706	1.00
280_A	284_D	4.368	1.00
152_V	321_A	3.953	1.00
248_S	284_D	3.755	1.00
43_G	135_A	3.741	1.00
45_V	142_F	3.694	1.00
184_T	210_I	3.584	1.00
208_K	229_E	3.277	1.00
184_T	208_K	3.092	1.00
98_S	326_A	3.048	1.00
248_S	285_V	3.021	1.00
317_A	320_E	2.975	1.00
7_G	89_Y	2.965	1.00
235_D	238_E	2.909	1.00
356_R	381_A	2.800	1.00
188_V	257_I	2.687	1.00
353_E	356_R	2.675	1.00
151_R	328_E	2.589	1.00
212_A	231_I	2.587	1.00
262_V	276_L	2.356	1.00
14_P	87_S	2.351	1.00
100_L	121_V	2.335	1.00
174_R	204_H	2.327	1.00
185_V	206_V	2.254	1.00
259_K	288_E	2.241	1.00
186_L	212_A	2.224	1.00
151_R	327_Q	2.206	1.00
141_M	332_F	2.154	1.00
216_R	230_V	2.122	1.00
239_R	242_E	2.107	1.00
259_K	263_E	2.100	1.00
19_E	283_R	2.097	1.00
276_L	295_A	2.070	1.00
216_R	232_A	2.068	1.00
352_A	388_L	2.066	1.00
14_P	17_L	2.060	1.00
216_R	220_Q	2.055	1.00
248_S	280_A	2.045	1.00
328_E	331_E	2.041	1.00
255_P	286_E	2.034	1.00
359_L	362_K	2.028	1.00
102_R	108_D	2.008	1.00
116_Q	196_L	1.968	1.00
94_N	333_M	1.927	1.00
258_G	261_M	1.920	1.00
312_A	315_K	1.918	1.00
129_Q	139_E	1.901	1.00
220_Q	224_D	1.894	1.00
199_R	225_E	1.881	1.00
57_L	69_L	1.873	1.00
349_R	393_T	1.853	1.00
285_V	289_V	1.846	1.00
157_D	160_A	1.823	1.00
349_R	386_N	1.793	1.00
17_L	87_S	1.789	1.00
231_I	239_R	1.785	1.00
353_E	357_D	1.742	1.00
250_T	284_D	1.727	1.00
95_D	98_S	1.719	1.00
56_Y	142_F	1.705	1.00
190_A	213_N	1.695	1.00
105_S	152_V	1.689	1.00
262_V	265_A	1.688	1.00
359_L	383_K	1.659	1.00
260_G	263_E	1.638	1.00
23_F	31_A	1.633	1.00
32_L	133_M	1.615	1.00
128_S	133_M	1.607	1.00
43_G	58_S	1.596	1.00
210_I	231_I	1.594	1.00
125_F	139_E	1.591	1.00
281_V	300_V	1.576	1.00
148_V	325_V	1.570	1.00
363_A	376_I	1.542	1.00
36_L	133_M	1.540	1.00
5_A	56_Y	1.532	1.00
356_R	378_Q	1.527	1.00
262_V	289_V	1.499	0.99
97_V	141_M	1.493	0.99
97_V	329_T	1.480	0.99
259_K	291_K	1.474	0.99
56_Y	103_V	1.463	0.99
364_L	374_Q	1.463	0.99
288_E	291_K	1.462	0.99
58_S	135_A	1.461	0.99
212_A	233_L	1.456	0.99
146_F	149_A	1.455	0.99
8_I	21_V	1.453	0.99
103_V	108_D	1.448	0.99
359_L	387_R	1.431	0.99
352_A	389_I	1.430	0.99
195_E	225_E	1.425	0.99
332_F	335_W	1.425	0.99
31_A	46_V	1.419	0.99
198_A	226_V	1.416	0.99
118_L	149_A	1.405	0.99
185_V	201_L	1.403	0.99
89_Y	108_D	1.391	0.99
125_F	129_Q	1.378	0.99
176_I	296_Y	1.376	0.99
319_V	322_E	1.374	0.99
70_I	88_L	1.368	0.99
47_L	121_V	1.361	0.99
344_T	412_R	1.356	0.99
356_R	382_W	1.350	0.99
240_L	246_I	1.346	0.99
304_Q	308_S	1.346	0.99
162_A	167_F	1.344	0.99
105_S	321_A	1.338	0.99
407_R	414_S	1.328	0.99
11_K	108_D	1.311	0.99
370_G	373_A	1.306	0.99
237_D	261_M	1.304	0.99
134_K	139_E	1.303	0.99
18_R	301_D	1.301	0.99
80_N	83_D	1.294	0.98
299_S	302_D	1.292	0.98
9_N	108_D	1.276	0.98
212_A	236_I	1.271	0.98
298_Y	302_D	1.267	0.98
186_L	243_A	1.266	0.98
351_Q	391_A	1.260	0.98
229_E	239_R	1.257	0.98
179_S	182_T	1.243	0.98
140_R	335_W	1.236	0.98
162_A	168_A	1.234	0.98
186_L	239_R	1.229	0.98
255_P	287_P	1.224	0.98
71_R	75_D	1.221	0.98
379_D	383_K	1.215	0.98
210_I	229_E	1.210	0.98
239_R	243_A	1.210	0.98
375_A	379_D	1.200	0.98
369_Q	373_A	1.197	0.97
256_I	284_D	1.195	0.97
71_R	81_E	1.193	0.97
165_V	193_T	1.188	0.97
385_T	388_L	1.185	0.97
246_I	276_L	1.184	0.97
169_A	277_V	1.176	0.97
165_V	279_I	1.171	0.97
42_Q	60_E	1.169	0.97
182_T	207_Q	1.167	0.97
101_M	329_T	1.154	0.97
368_E	374_Q	1.154	0.97
169_A	279_I	1.150	0.97
148_V	324_I	1.148	0.97
262_V	274_M	1.140	0.97
395_S	398_Q	1.139	0.97
177_F	245_I	1.135	0.97
53_T	106_G	1.128	0.96
260_G	288_E	1.127	0.96
149_A	161_S	1.125	0.96
4_L	57_L	1.122	0.96
261_M	286_E	1.122	0.96
210_I	243_A	1.120	0.96
139_E	143_Q	1.119	0.96
121_V	142_F	1.115	0.96
105_S	148_V	1.115	0.96
29_D	131_G	1.110	0.96
231_I	235_D	1.106	0.96
201_L	206_V	1.101	0.96
31_A	72_W	1.097	0.96
391_A	416_G	1.093	0.96
184_T	207_Q	1.093	0.96
21_V	84_L	1.092	0.96
144_K	148_V	1.088	0.96
184_T	242_E	1.087	0.96
74_C	79_L	1.075	0.95
27_K	77_H	1.073	0.95
172_L	298_Y	1.070	0.95
363_A	380_L	1.062	0.95
238_E	242_E	1.060	0.95
104_A	121_V	1.052	0.95
97_V	333_M	1.049	0.95
47_L	124_A	1.047	0.95
254_L	258_G	1.045	0.95
196_L	200_H	1.043	0.94
271_N	294_N	1.039	0.94
106_G	112_L	1.035	0.94
143_Q	146_F	1.033	0.94
286_E	290_G	1.031	0.94
363_A	381_A	1.029	0.94
348_Y	415_L	1.027	0.94
405_N	409_N	1.024	0.94
187_L	201_L	1.023	0.94
207_Q	229_E	1.022	0.94
348_Y	389_I	1.021	0.94
8_I	88_L	1.019	0.94
210_I	239_R	1.014	0.94
217_E	221_I	1.012	0.94
219_A	223_A	1.010	0.93
209_M	228_A	1.010	0.93
374_Q	378_Q	1.009	0.93
6_L	70_I	1.008	0.93
258_G	286_E	1.007	0.93
403_G	406_E	1.001	0.93
186_L	231_I	1.001	0.93
214_R	282_P	0.997	0.93
10_H	110_L	0.990	0.93
110_L	300_V	0.985	0.93
254_L	260_G	0.983	0.92
183_V	245_I	0.981	0.92
250_T	256_I	0.979	0.92
126_A	130_K	0.967	0.92
216_R	233_L	0.963	0.92
175_Q	309_H	0.963	0.92
46_V	55_L	0.961	0.92
56_Y	106_G	0.960	0.92
7_G	18_R	0.957	0.91
30_Q	33_D	0.956	0.91
144_K	147_S	0.953	0.91
347_E	412_R	0.948	0.91
257_I	276_L	0.948	0.91
162_A	171_T	0.940	0.91
171_T	204_H	0.936	0.91
188_V	285_V	0.934	0.90
36_L	44_G	0.929	0.90
221_I	224_D	0.929	0.90
231_I	236_I	0.927	0.90
360_T	378_Q	0.926	0.90
407_R	411_L	0.923	0.90
326_A	330_S	0.921	0.90
339_Q	342_S	0.921	0.90
45_V	134_K	0.921	0.90
260_G	264_R	0.919	0.90
187_L	198_A	0.918	0.90
372_D	375_A	0.917	0.90
232_A	235_D	0.914	0.89
259_K	286_E	0.913	0.89
177_F	296_Y	0.910	0.89
145_S	149_A	0.910	0.89
35_L	44_G	0.902	0.89
406_E	409_N	0.901	0.89
98_S	329_T	0.900	0.89
276_L	297_L	0.898	0.89
153_R	363_A	0.897	0.89
290_G	297_L	0.896	0.89
118_L	146_F	0.895	0.88
344_T	347_E	0.894	0.88
257_I	261_M	0.892	0.88
357_D	378_Q	0.889	0.88
359_L	379_D	0.888	0.88
258_G	288_E	0.888	0.88
122_K	146_F	0.886	0.88
111_V	168_A	0.885	0.88
136_S	339_Q	0.881	0.88
409_N	413_D	0.880	0.88
144_K	328_E	0.879	0.88
122_K	150_K	0.877	0.87
33_D	131_G	0.877	0.87
186_L	233_L	0.876	0.87
128_S	134_K	0.873	0.87
252_S	284_D	0.870	0.87
3_L	137_E	0.865	0.87
411_L	414_S	0.864	0.87
367_L	377_M	0.864	0.87
194_I	222_L	0.863	0.87
91_H	95_D	0.862	0.87
289_V	292_L	0.860	0.86
377_M	380_L	0.859	0.86
250_T	280_A	0.858	0.86
276_L	289_V	0.856	0.86
381_A	384_L	0.855	0.86
99_H	108_D	0.853	0.86
143_Q	147_S	0.849	0.86
44_G	55_L	0.846	0.86
198_A	228_A	0.841	0.85
150_K	154_T	0.840	0.85
217_E	220_Q	0.835	0.85
184_T	243_A	0.833	0.85
166_A	197_V	0.832	0.85
12_T	89_Y	0.832	0.85
286_E	289_V	0.831	0.84
240_L	265_A	0.830	0.84
244_D	272_Q	0.830	0.84
137_E	335_W	0.826	0.84
156_T	324_I	0.824	0.84
173_A	275_L	0.820	0.84
41_V	59_V	0.819	0.84
149_A	153_R	0.815	0.83
378_Q	382_W	0.812	0.83
18_R	281_V	0.811	0.83
356_R	384_L	0.811	0.83
178_E	182_T	0.809	0.83
15_V	281_V	0.804	0.82
165_V	300_V	0.803	0.82
404_D	407_R	0.800	0.82
20_R	83_D	0.800	0.82
115_P	153_R	0.797	0.82
9_N	89_Y	0.796	0.82
254_L	286_E	0.795	0.82
35_L	69_L	0.795	0.82
28_L	127_D	0.793	0.82
50_C	120_Q	0.792	0.82
125_F	143_Q	0.792	0.82
111_V	165_V	0.791	0.81
140_R	339_Q	0.790	0.81
355_V	380_L	0.789	0.81
121_V	245_I	0.785	0.81
126_A	129_Q	0.784	0.81
176_I	245_I	0.781	0.81
344_T	348_Y	0.779	0.80
398_Q	402_D	0.779	0.80
156_T	321_A	0.778	0.80
61_E	67_E	0.776	0.80
348_Y	392_P	0.775	0.80
127_D	131_G	0.772	0.80
111_V	305_S	0.772	0.80
173_A	245_I	0.770	0.80
162_A	318_A	0.769	0.80
94_N	330_S	0.769	0.80
56_Y	121_V	0.767	0.79
407_R	410_I	0.765	0.79
240_L	257_I	0.763	0.79
362_K	390_H	0.762	0.79
380_L	384_L	0.758	0.79
27_K	30_Q	0.756	0.78
273_P	296_Y	0.751	0.78
366_A	371_G	0.751	0.78
389_I	415_L	0.749	0.78
190_A	218_R	0.748	0.78
400_A	404_D	0.748	0.78
248_S	289_V	0.747	0.78
158_I	352_A	0.745	0.77
105_S	324_I	0.745	0.77
171_T	279_I	0.743	0.77
200_H	321_A	0.743	0.77
253_P	280_A	0.742	0.77
166_A	170_C	0.742	0.77
32_L	44_G	0.741	0.77
183_V	244_D	0.740	0.77
247_I	279_I	0.738	0.77
360_T	364_L	0.738	0.77
152_V	324_I	0.736	0.77
350_S	354_Q	0.735	0.76
213_N	219_A	0.735	0.76
188_V	246_I	0.734	0.76
335_W	338_A	0.733	0.76
127_D	130_K	0.733	0.76
355_V	384_L	0.732	0.76
45_V	124_A	0.731	0.76
250_T	282_P	0.731	0.76
344_T	396_L	0.729	0.76
406_E	410_I	0.727	0.76
367_L	376_I	0.725	0.75
212_A	232_A	0.724	0.75
385_T	389_I	0.723	0.75
315_K	319_V	0.723	0.75
246_I	274_M	0.722	0.75
378_Q	381_A	0.721	0.75
249_S	279_I	0.720	0.75
23_F	77_H	0.719	0.75
155_E	324_I	0.719	0.75
362_K	383_K	0.718	0.75
163_V	314_R	0.714	0.74
100_L	142_F	0.714	0.74
21_V	79_L	0.714	0.74
156_T	317_A	0.713	0.74
140_R	146_F	0.708	0.74
236_I	243_A	0.707	0.74
156_T	173_A	0.706	0.74
41_V	44_G	0.706	0.74
124_A	128_S	0.705	0.73
116_Q	283_R	0.704	0.73
186_L	236_I	0.703	0.73
371_G	374_Q	0.702	0.73
7_G	150_K	0.701	0.73
335_W	342_S	0.701	0.73
360_T	377_M	0.699	0.73
206_V	209_M	0.695	0.72
162_A	310_N	0.692	0.72
395_S	413_D	0.691	0.72
313_Q	316_A	0.690	0.72
221_I	225_E	0.688	0.72
106_G	159_G	0.687	0.72
348_Y	411_L	0.685	0.71
70_I	85_R	0.685	0.71
237_D	254_L	0.685	0.71
99_H	103_V	0.684	0.71
253_P	284_D	0.684	0.71
123_K	246_I	0.682	0.71
325_V	329_T	0.682	0.71
393_T	397_Q	0.679	0.71
388_L	393_T	0.677	0.70
240_L	243_A	0.676	0.70
354_Q	357_D	0.675	0.70
21_V	77_H	0.675	0.70
325_V	351_Q	0.674	0.70
352_A	385_T	0.674	0.70
349_R	390_H	0.672	0.70
5_A	89_Y	0.671	0.70
198_A	251_A	0.668	0.69
136_S	139_E	0.664	0.69
351_Q	354_Q	0.663	0.69
215_T	219_A	0.662	0.69
323_T	326_A	0.661	0.69
67_E	85_R	0.659	0.68
3_L	96_A	0.658	0.68
215_T	218_R	0.657	0.68
358_E	361_A	0.657	0.68
308_S	312_A	0.656	0.68
190_A	211_I	0.655	0.68
16_S	19_E	0.652	0.68
233_L	236_I	0.652	0.68
354_Q	358_E	0.652	0.68
188_V	236_I	0.651	0.67
148_V	321_A	0.650	0.67
23_F	46_V	0.647	0.67
166_A	335_W	0.646	0.67
188_V	197_V	0.645	0.67
51_N	301_D	0.644	0.67
252_S	280_A	0.643	0.66
3_L	58_S	0.642	0.66
396_L	411_L	0.642	0.66
19_E	43_G	0.641	0.66
323_T	327_Q	0.641	0.66
215_T	397_Q	0.639	0.66
141_M	335_W	0.639	0.66
110_L	114_E	0.637	0.66
190_A	222_L	0.636	0.66
241_R	265_A	0.636	0.66
129_Q	143_Q	0.634	0.65
172_L	303_L	0.634	0.65
372_D	410_I	0.633	0.65
219_A	230_V	0.633	0.65
26_D	29_D	0.632	0.65
259_K	292_L	0.630	0.65
33_D	37_A	0.630	0.65
395_S	414_S	0.628	0.65
275_L	296_Y	0.627	0.65
173_A	180_L	0.625	0.64
235_D	260_G	0.624	0.64
233_L	254_L	0.624	0.64
243_A	274_M	0.621	0.64
197_V	215_T	0.621	0.64
27_K	34_S	0.621	0.64
185_V	275_L	0.620	0.64
178_E	211_I	0.619	0.64
237_D	260_G	0.617	0.63
405_N	408_L	0.617	0.63
314_R	317_A	0.617	0.63
115_P	187_L	0.616	0.63
115_P	149_A	0.614	0.63
41_V	65_L	0.614	0.63
370_G	374_Q	0.613	0.63
42_Q	209_M	0.613	0.63
197_V	247_I	0.611	0.63
168_A	307_I	0.610	0.62
324_I	339_Q	0.610	0.62
9_N	344_T	0.610	0.62
337_R	400_A	0.609	0.62
155_E	328_E	0.607	0.62
231_I	257_I	0.607	0.62
206_V	245_I	0.603	0.62
66_Q	92_Q	0.603	0.62
5_A	96_A	0.602	0.61
101_M	343_E	0.600	0.61
105_S	118_L	0.597	0.61
213_N	218_R	0.597	0.61
182_T	185_V	0.597	0.61
283_R	301_D	0.596	0.61
104_A	134_K	0.594	0.60
309_H	313_Q	0.594	0.60
81_E	85_R	0.593	0.60
101_M	348_Y	0.593	0.60
165_V	324_I	0.593	0.60
18_R	166_A	0.590	0.60
23_F	53_T	0.588	0.60
101_M	118_L	0.588	0.60
374_Q	377_M	0.586	0.59
157_D	317_A	0.585	0.59
222_L	225_E	0.583	0.59
391_A	395_S	0.582	0.59
373_A	377_M	0.582	0.59
247_I	284_D	0.579	0.58
349_R	392_P	0.578	0.58
264_R	288_E	0.578	0.58
172_L	175_Q	0.577	0.58
50_C	114_E	0.577	0.58
341_A	397_Q	0.576	0.58
4_L	59_V	0.575	0.58
38_Q	75_D	0.575	0.58
356_R	386_N	0.572	0.58
410_I	414_S	0.572	0.58
95_D	326_A	0.571	0.57
320_E	323_T	0.570	0.57
344_T	351_Q	0.569	0.57
201_L	205_K	0.568	0.57
15_V	19_E	0.567	0.57
220_Q	230_V	0.566	0.57
203_E	306_I	0.565	0.57
247_I	277_V	0.565	0.57
329_T	332_F	0.564	0.56
195_E	199_R	0.562	0.56
28_L	36_L	0.561	0.56
104_A	145_S	0.561	0.56
194_I	299_S	0.561	0.56
351_Q	361_A	0.560	0.56
213_N	222_L	0.559	0.56
140_R	332_F	0.559	0.56
214_R	250_T	0.559	0.56
361_A	364_L	0.558	0.56
59_V	65_L	0.558	0.56
153_R	282_P	0.556	0.55
193_T	303_L	0.556	0.55
195_E	249_S	0.555	0.55
240_L	262_V	0.555	0.55
68_A	71_R	0.555	0.55
177_F	298_Y	0.554	0.55
74_C	81_E	0.554	0.55
45_V	121_V	0.554	0.55
170_C	303_L	0.554	0.55
256_I	280_A	0.553	0.55
153_R	396_L	0.553	0.55
172_L	306_I	0.552	0.55
229_E	242_E	0.551	0.55
186_L	246_I	0.551	0.55
149_A	152_V	0.550	0.55
252_S	256_I	0.550	0.55
67_E	364_L	0.549	0.54
101_M	148_V	0.547	0.54
283_R	297_L	0.547	0.54
201_L	247_I	0.547	0.54
132_H	316_A	0.546	0.54
94_N	388_L	0.546	0.54
125_F	146_F	0.546	0.54
380_L	383_K	0.545	0.54
49_T	52_R	0.544	0.54
3_L	97_V	0.543	0.54
152_V	156_T	0.543	0.54
270_R	350_S	0.542	0.54
121_V	126_A	0.542	0.54
255_P	289_V	0.541	0.53
357_D	361_A	0.541	0.53
8_I	13_A	0.540	0.53
25_P	123_K	0.539	0.53
18_R	335_W	0.539	0.53
7_G	12_T	0.538	0.53
34_S	75_D	0.537	0.53
349_R	388_L	0.537	0.53
58_S	137_E	0.537	0.53
356_R	363_A	0.534	0.52
18_R	48_S	0.534	0.52
55_L	69_L	0.533	0.52
107_L	322_E	0.533	0.52
15_V	283_R	0.532	0.52
114_E	120_Q	0.531	0.52
67_E	242_E	0.531	0.52
104_A	148_V	0.531	0.52
364_L	370_G	0.529	0.52
166_A	279_I	0.529	0.52
381_A	387_R	0.529	0.52
237_D	264_R	0.529	0.52
57_L	209_M	0.528	0.52
39_P	42_Q	0.526	0.51
34_S	295_A	0.524	0.51
41_V	57_L	0.524	0.51
115_P	119_G	0.523	0.51
45_V	100_L	0.523	0.51
31_A	76_Y	0.523	0.51
163_V	306_I	0.522	0.51
9_N	162_A	0.522	0.51
42_Q	58_S	0.522	0.51
363_A	367_L	0.521	0.51
265_A	274_M	0.521	0.51
104_A	118_L	0.520	0.51
178_E	183_V	0.520	0.51
178_E	251_A	0.520	0.51
193_T	197_V	0.518	0.50
362_K	387_R	0.517	0.50
220_Q	232_A	0.516	0.50
279_I	306_I	0.516	0.50
128_S	367_L	0.515	0.50
167_F	200_H	0.515	0.50
100_L	201_L	0.515	0.50
98_S	102_R	0.514	0.50
383_K	415_L	0.513	0.50
250_T	283_R	0.513	0.50
55_L	129_Q	0.513	0.50
183_V	294_N	0.512	0.50
48_S	281_V	0.511	0.49
148_V	328_E	0.511	0.49
275_L	298_Y	0.511	0.49
409_N	416_G	0.510	0.49
103_V	121_V	0.510	0.49
29_D	127_D	0.508	0.49
360_T	380_L	0.507	0.49
115_P	159_G	0.507	0.49
187_L	212_A	0.507	0.49
168_A	301_D	0.507	0.49
24_S	29_D	0.506	0.49
86_K	416_G	0.505	0.49
187_L	275_L	0.504	0.48
367_L	373_A	0.504	0.48
134_K	138_L	0.504	0.48
27_K	286_E	0.504	0.48
318_A	321_A	0.503	0.48
9_N	112_L	0.503	0.48
343_E	348_Y	0.503	0.48
167_F	171_T	0.503	0.48
40_M	65_L	0.503	0.48
241_R	262_V	0.502	0.48
32_L	36_L	0.502	0.48
200_H	300_V	0.502	0.48
44_G	57_L	0.501	0.48
248_S	276_L	0.501	0.48
59_V	62_Q	0.501	0.48
6_L	69_L	0.501	0.48
250_T	253_P	0.500	0.48

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4n7rA	2	0.9498	100	0.286	Contact Map
1gpjA	2	0.9426	100	0.396	Contact Map
4ppmA	2	0.0909	99.9	0.786	Contact Map
1edzA	2	0.6938	99.9	0.802	Contact Map
1p77A	1	0.61	99.9	0.816	Contact Map
3u62A	1	0.5574	99.9	0.817	Contact Map
1nytA	6	0.6172	99.8	0.83	Contact Map
3fbtA	2	0.6244	99.8	0.835	Contact Map
3oj0A	1	0.3301	99.8	0.836	Contact Map
2eggA	5	0.6268	99.8	0.838	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0112 seconds.