FLGI - ECOLI - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

FLGI - Flagellar P-ring protein

UniProt:	P0A6S3	Sequences: MIKFLSALILLLVTTAAQAERIRDLTSVQGVRQNSLIGYGLVVGLDGTGDQTTQTPFTTQTLNNMLSQLGITVPTGTNMQLKNVAAVMVTASLPPFGRQGQTIDVVVSSMGNAKSLRGGTLLMTPLKGVDSQVYALAQGNILVGGAGASAGGSSVQVNQLNGGRITNGAVIERELPSQFGVGNTLNLQLNDEDFSMAQQIADTINRVRGYGSATALDARTIQVRVPSGNSSQVRFLADIQNMQVNVTPQDAKVVINSRTGSVVMNREVTLDSCAVAQGNLSVTVNRQANVSQPDTPFGGGQTVVTPQTQIDLRQSGGSLQSVRSSASLNNVVRALNALGATPMDLMSILQSMQSAGCLRAKLEII	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG20265
Length:	365 (356)
Sequences:	1254 (763)
Seq/√Len:	40.5

ECOLI - FLGI

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
82_K	114_K	5.314	1.00
89_V	124_T	5.022	1.00
26_T	200_I	3.885	1.00
33_Q	92_S	3.634	1.00
294_D	298_G	3.358	1.00
99_Q	174_E	3.315	1.00
203_T	242_M	3.240	1.00
275_V	282_V	3.051	1.00
290_V	305_T	3.008	1.00
150_A	286_R	2.965	1.00
27_S	190_N	2.925	1.00
51_Q	80_Q	2.811	1.00
208_R	235_F	2.744	1.00
286_R	308_T	2.730	1.00
223_V	239_I	2.724	1.00
273_C	352_M	2.698	1.00
22_I	200_I	2.678	1.00
23_R	193_D	2.624	1.00
253_V	358_L	2.602	1.00
319_L	335_L	2.592	1.00
289_N	305_T	2.568	1.00
200_I	221_I	2.543	1.00
189_L	197_A	2.486	1.00
22_I	239_I	2.390	1.00
83_N	109_S	2.281	1.00
292_Q	302_T	2.223	1.00
207_V	238_D	2.220	1.00
151_G	286_R	2.216	1.00
288_A	307_Q	2.201	0.99
332_V	349_L	2.179	0.99
195_S	199_Q	2.162	0.99
271_D	359_R	2.160	0.99
199_Q	246_V	2.148	0.99
31_V	194_F	2.142	0.99
51_Q	112_N	2.141	0.99
291_S	305_T	2.138	0.99
23_R	240_Q	2.112	0.99
155_V	312_L	2.060	0.99
105_V	137_A	2.057	0.99
314_Q	343_M	2.017	0.99
276_A	319_L	2.009	0.99
217_D	220_T	1.986	0.99
151_G	308_T	1.981	0.99
98_R	217_D	1.980	0.99
294_D	297_F	1.971	0.99
157_V	314_Q	1.955	0.99
28_V	187_L	1.928	0.99
192_E	219_R	1.903	0.99
19_A	243_Q	1.900	0.98
141_I	163_G	1.884	0.98
129_V	136_L	1.882	0.98
292_Q	300_G	1.881	0.98
93_L	171_I	1.848	0.98
26_T	187_L	1.821	0.98
329_N	333_R	1.815	0.98
21_R	193_D	1.798	0.98
51_Q	54_Q	1.786	0.98
56_P	112_N	1.747	0.97
92_S	102_T	1.741	0.97
46_D	160_L	1.731	0.97
21_R	24_D	1.703	0.97
32_R	172_E	1.690	0.97
205_N	213_A	1.681	0.97
23_R	248_P	1.675	0.97
319_L	331_V	1.646	0.96
291_S	303_V	1.643	0.96
62_L	69_L	1.643	0.96
25_L	200_I	1.639	0.96
291_S	302_T	1.631	0.96
225_V	232_Q	1.630	0.96
146_A	312_L	1.625	0.96
289_N	307_Q	1.611	0.96
80_Q	112_N	1.605	0.96
21_R	251_A	1.604	0.96
270_L	331_V	1.602	0.96
41_L	84_V	1.598	0.96
153_S	308_T	1.583	0.95
20_E	359_R	1.577	0.95
28_V	236_L	1.569	0.95
98_R	220_T	1.551	0.95
270_L	357_C	1.543	0.95
253_V	362_L	1.533	0.94
135_A	169_A	1.533	0.94
200_I	244_V	1.523	0.94
25_L	246_V	1.515	0.94
320_Q	338_L	1.510	0.94
37_I	122_L	1.505	0.94
55_T	81_L	1.496	0.94
252_K	363_E	1.487	0.93
288_A	306_P	1.468	0.93
90_T	120_T	1.462	0.93
23_R	251_A	1.456	0.93
226_P	235_F	1.446	0.92
54_Q	81_L	1.433	0.92
197_A	201_A	1.412	0.91
186_N	220_T	1.405	0.91
26_T	240_Q	1.393	0.91
293_P	302_T	1.390	0.91
127_K	132_Q	1.378	0.90
215_A	233_V	1.368	0.90
256_N	259_T	1.339	0.89
147_G	343_M	1.334	0.89
257_S	346_M	1.330	0.89
51_Q	82_K	1.321	0.88
93_L	175_L	1.313	0.88
216_L	222_Q	1.310	0.88
207_V	242_M	1.308	0.88
328_L	345_L	1.307	0.88
54_Q	112_N	1.305	0.88
144_G	347_S	1.299	0.88
282_V	331_V	1.294	0.87
195_S	240_Q	1.288	0.87
141_I	313_R	1.288	0.87
184_T	222_Q	1.286	0.87
254_V	363_E	1.280	0.87
208_R	239_I	1.274	0.87
179_F	236_L	1.274	0.87
201_A	215_A	1.273	0.87
286_R	306_P	1.266	0.86
51_Q	56_P	1.265	0.86
115_S	143_V	1.226	0.84
298_G	302_T	1.224	0.84
54_Q	80_Q	1.212	0.84
255_I	346_M	1.193	0.83
257_S	343_M	1.190	0.83
195_S	241_N	1.183	0.82
39_Y	86_A	1.171	0.82
149_S	310_I	1.162	0.81
290_V	293_P	1.159	0.81
171_I	175_L	1.159	0.81
198_Q	202_D	1.159	0.81
123_M	331_V	1.156	0.81
288_A	305_T	1.155	0.81
88_M	122_L	1.152	0.80
22_I	26_T	1.151	0.80
193_D	240_Q	1.139	0.80
156_Q	160_L	1.139	0.80
201_A	221_I	1.134	0.79
142_L	364_I	1.127	0.79
107_V	141_I	1.123	0.79
150_A	308_T	1.119	0.78
303_V	307_Q	1.114	0.78
159_Q	286_R	1.091	0.77
81_L	112_N	1.091	0.77
11_L	19_A	1.086	0.76
156_Q	284_V	1.080	0.76
46_D	161_N	1.077	0.76
130_D	134_Y	1.076	0.76
293_P	300_G	1.064	0.75
197_A	221_I	1.057	0.74
35_S	170_V	1.055	0.74
300_G	339_G	1.047	0.74
290_V	303_V	1.043	0.73
164_R	350_Q	1.043	0.73
16_A	19_A	1.040	0.73
57_F	81_L	1.039	0.73
22_I	201_A	1.027	0.72
33_Q	102_T	1.026	0.72
61_T	65_M	1.023	0.72
159_Q	162_G	1.017	0.71
117_R	143_V	1.006	0.71
35_S	136_L	1.006	0.71
322_V	338_L	1.005	0.71
235_F	239_I	1.000	0.70
23_R	196_M	1.000	0.70
291_S	300_G	0.998	0.70
320_Q	335_L	0.996	0.70
31_V	96_F	0.994	0.70
106_V	162_G	0.990	0.69
69_L	335_L	0.990	0.69
152_G	341_T	0.989	0.69
250_D	361_K	0.988	0.69
104_D	193_D	0.985	0.69
304_V	307_Q	0.982	0.69
39_Y	61_T	0.973	0.68
61_T	86_A	0.967	0.68
214_T	222_Q	0.958	0.67
12_L	19_A	0.958	0.67
195_S	237_A	0.957	0.67
290_V	302_T	0.957	0.67
97_G	171_I	0.953	0.66
50_D	125_P	0.951	0.66
15_T	18_Q	0.947	0.66
122_L	133_V	0.939	0.65
21_R	248_P	0.937	0.65
281_S	364_I	0.935	0.65
98_R	174_E	0.934	0.65
21_R	240_Q	0.932	0.65
25_L	244_V	0.932	0.65
336_N	342_P	0.931	0.65
272_S	352_M	0.928	0.64
285_N	311_D	0.928	0.64
61_T	66_L	0.918	0.63
13_V	18_Q	0.916	0.63
54_Q	256_N	0.915	0.63
66_L	86_A	0.915	0.63
204_I	242_M	0.914	0.63
202_D	206_R	0.914	0.63
231_S	234_R	0.911	0.63
270_L	352_M	0.911	0.63
259_T	277_Q	0.909	0.63
127_K	241_N	0.902	0.62
88_M	124_T	0.901	0.62
123_M	136_L	0.892	0.61
103_I	171_I	0.891	0.61
354_S	363_E	0.887	0.61
91_A	103_I	0.886	0.61
188_Q	219_R	0.886	0.61
41_L	284_V	0.880	0.60
201_A	230_S	0.878	0.60
290_V	304_V	0.876	0.60
149_S	154_S	0.866	0.59
128_G	132_Q	0.857	0.58
37_I	71_I	0.856	0.58
12_L	15_T	0.853	0.58
197_A	233_V	0.852	0.58
142_L	257_S	0.851	0.58
96_F	199_Q	0.849	0.57
130_D	173_R	0.846	0.57
67_S	273_C	0.840	0.57
277_Q	347_S	0.840	0.57
215_A	340_A	0.838	0.56
129_V	199_Q	0.834	0.56
291_S	298_G	0.832	0.56
8_L	204_I	0.827	0.55
148_A	155_V	0.826	0.55
188_Q	220_T	0.825	0.55
21_R	217_D	0.822	0.55
225_V	229_N	0.822	0.55
117_R	257_S	0.822	0.55
322_V	335_L	0.819	0.55
339_G	342_P	0.816	0.54
98_R	219_R	0.815	0.54
192_E	197_A	0.815	0.54
212_S	235_F	0.812	0.54
193_D	251_A	0.811	0.54
215_A	226_P	0.809	0.54
113_A	185_L	0.807	0.54
93_L	162_G	0.799	0.53
10_L	17_A	0.796	0.53
330_N	333_R	0.787	0.52
157_V	257_S	0.785	0.52
179_F	194_F	0.783	0.51
285_N	289_N	0.782	0.51
148_A	310_I	0.782	0.51
79_M	363_E	0.778	0.51
39_Y	58_T	0.778	0.51
264_M	282_V	0.775	0.51
319_L	322_V	0.771	0.50
61_T	109_S	0.769	0.50
105_V	214_T	0.769	0.50
66_L	71_I	0.768	0.50
144_G	259_T	0.767	0.50
112_N	161_N	0.765	0.50
222_Q	252_K	0.764	0.50
159_Q	277_Q	0.763	0.50
65_M	342_P	0.762	0.49
50_D	360_A	0.760	0.49
58_T	109_S	0.758	0.49
361_K	364_I	0.757	0.49
136_L	170_V	0.756	0.49
192_E	265_N	0.755	0.49
69_L	277_Q	0.754	0.49
196_M	248_P	0.753	0.49
99_Q	171_I	0.753	0.49
215_A	236_L	0.753	0.49
89_V	105_V	0.753	0.49
144_G	344_D	0.753	0.49
68_Q	101_Q	0.752	0.49
67_S	262_V	0.751	0.48
56_P	81_L	0.750	0.48
196_M	246_V	0.747	0.48
183_N	224_R	0.745	0.48
163_G	262_V	0.745	0.48
199_Q	248_P	0.744	0.48
51_Q	161_N	0.739	0.47
237_A	241_N	0.737	0.47
208_R	238_D	0.735	0.47
196_M	357_C	0.733	0.47
28_V	60_Q	0.732	0.47
288_A	304_V	0.727	0.46
328_L	336_N	0.726	0.46
92_S	170_V	0.726	0.46
35_S	92_S	0.725	0.46
185_L	220_T	0.724	0.46
261_S	265_N	0.723	0.46
58_T	84_V	0.722	0.46
29_Q	186_N	0.720	0.46
69_L	354_S	0.719	0.45
50_D	112_N	0.718	0.45
89_V	102_T	0.716	0.45
221_I	244_V	0.714	0.45
144_G	329_N	0.714	0.45
74_P	78_N	0.713	0.45
290_V	300_G	0.708	0.44
22_I	212_S	0.707	0.44
331_V	335_L	0.707	0.44
43_V	187_L	0.706	0.44
202_D	234_R	0.705	0.44
327_S	331_V	0.702	0.44
46_D	125_P	0.701	0.44
58_T	86_A	0.701	0.44
64_N	72_T	0.700	0.44
59_T	62_L	0.699	0.44
326_A	330_N	0.699	0.44
201_A	251_A	0.699	0.44
9_I	12_L	0.696	0.43
274_A	336_N	0.696	0.43
34_N	172_E	0.693	0.43
57_F	73_V	0.692	0.43
120_T	362_L	0.691	0.43
347_S	350_Q	0.689	0.43
224_R	239_I	0.686	0.42
202_D	311_D	0.686	0.42
29_Q	262_V	0.685	0.42
52_T	80_Q	0.685	0.42
232_Q	256_N	0.683	0.42
50_D	64_N	0.682	0.42
272_S	324_S	0.682	0.42
199_Q	240_Q	0.681	0.42
270_L	273_C	0.681	0.42
233_V	270_L	0.681	0.42
25_L	307_Q	0.680	0.42
66_L	285_N	0.679	0.42
120_T	132_Q	0.677	0.42
108_S	185_L	0.674	0.41
63_N	75_T	0.672	0.41
186_N	222_Q	0.671	0.41
33_Q	170_V	0.670	0.41
136_L	281_S	0.669	0.41
264_M	327_S	0.668	0.41
223_V	347_S	0.667	0.41
79_M	88_M	0.665	0.41
8_L	254_V	0.665	0.41
287_Q	309_Q	0.664	0.41
6_S	113_A	0.664	0.41
77_T	154_S	0.663	0.40
56_P	158_N	0.662	0.40
165_I	263_V	0.662	0.40
26_T	109_S	0.661	0.40
190_N	361_K	0.661	0.40
12_L	17_A	0.660	0.40
179_F	218_A	0.660	0.40
192_E	218_A	0.660	0.40
265_N	306_P	0.660	0.40
321_S	326_A	0.659	0.40
54_Q	59_T	0.658	0.40
8_L	12_L	0.657	0.40
135_A	189_L	0.657	0.40
152_G	286_R	0.656	0.40
9_I	13_V	0.655	0.40
107_V	355_A	0.654	0.40
219_R	261_S	0.654	0.40
185_L	239_I	0.654	0.40
186_N	275_V	0.654	0.40
279_N	315_S	0.653	0.40
215_A	232_Q	0.652	0.39
43_V	109_S	0.650	0.39
60_Q	235_F	0.649	0.39
94_P	103_I	0.649	0.39
81_L	84_V	0.649	0.39
177_S	256_N	0.645	0.39
226_P	277_Q	0.645	0.39
263_V	297_F	0.644	0.39
74_P	282_V	0.643	0.39
156_Q	159_Q	0.643	0.39
298_G	351_S	0.643	0.39
71_I	340_A	0.642	0.39
330_N	343_M	0.639	0.38
156_Q	281_S	0.637	0.38
353_Q	360_A	0.636	0.38
102_T	170_V	0.636	0.38
294_D	323_R	0.635	0.38
208_R	212_S	0.634	0.38
234_R	237_A	0.634	0.38
14_T	17_A	0.633	0.38
39_Y	57_F	0.632	0.38
41_L	57_F	0.632	0.38
14_T	18_Q	0.629	0.37
185_L	236_L	0.628	0.37
109_S	236_L	0.626	0.37
298_G	308_T	0.626	0.37
252_K	315_S	0.626	0.37
33_Q	296_P	0.624	0.37
57_F	86_A	0.622	0.37
62_L	78_N	0.622	0.37
55_T	80_Q	0.622	0.37
209_G	223_V	0.621	0.37
69_L	243_Q	0.620	0.37
275_V	315_S	0.618	0.36
287_Q	307_Q	0.614	0.36
152_G	306_P	0.613	0.36
270_L	285_N	0.611	0.36
48_T	225_V	0.611	0.36
264_M	276_A	0.610	0.36
55_T	59_T	0.610	0.36
48_T	141_I	0.609	0.36
103_I	316_G	0.609	0.36
226_P	233_V	0.606	0.35
57_F	71_I	0.606	0.35
214_T	227_S	0.605	0.35
146_A	308_T	0.605	0.35
340_A	345_L	0.604	0.35
43_V	122_L	0.603	0.35
51_Q	114_K	0.602	0.35
109_S	112_N	0.601	0.35
8_L	16_A	0.600	0.35
346_M	359_R	0.600	0.35
39_Y	66_L	0.600	0.35
208_R	231_S	0.598	0.35
18_Q	245_N	0.598	0.35
128_G	134_Y	0.598	0.35
294_D	299_G	0.597	0.35
258_R	351_S	0.596	0.35
149_S	153_S	0.595	0.35
10_L	214_T	0.594	0.34
232_Q	244_V	0.594	0.34
122_L	194_F	0.592	0.34
105_V	113_A	0.590	0.34
246_V	359_R	0.590	0.34
62_L	322_V	0.589	0.34
203_T	206_R	0.584	0.34
28_V	185_L	0.582	0.33
107_V	285_N	0.582	0.33
51_Q	64_N	0.582	0.33
13_V	17_A	0.581	0.33
187_L	200_I	0.578	0.33
232_Q	257_S	0.575	0.33
127_K	133_V	0.574	0.33
84_V	284_V	0.574	0.33
72_T	81_L	0.574	0.33
131_S	332_V	0.573	0.33
95_P	316_G	0.573	0.33
120_T	162_G	0.571	0.33
180_G	262_V	0.571	0.33
35_S	350_Q	0.570	0.32
153_S	286_R	0.569	0.32
282_V	347_S	0.569	0.32
195_S	322_V	0.568	0.32
28_V	179_F	0.568	0.32
136_L	262_V	0.567	0.32
7_A	16_A	0.567	0.32
96_F	217_D	0.566	0.32
20_E	362_L	0.566	0.32
130_D	217_D	0.566	0.32
23_R	195_S	0.565	0.32
64_N	74_P	0.565	0.32
352_M	357_C	0.564	0.32
145_G	258_R	0.563	0.32
255_I	362_L	0.562	0.32
92_S	361_K	0.560	0.32
88_M	329_N	0.560	0.32
330_N	361_K	0.559	0.32
31_V	39_Y	0.557	0.31
182_G	256_N	0.557	0.31
282_V	307_Q	0.555	0.31
277_Q	345_L	0.554	0.31
201_A	218_A	0.554	0.31
297_F	308_T	0.552	0.31
265_N	327_S	0.552	0.31
8_L	227_S	0.551	0.31
41_L	129_V	0.551	0.31
284_V	310_I	0.551	0.31
288_A	310_I	0.551	0.31
8_L	11_L	0.550	0.31
293_P	304_V	0.549	0.31
22_I	242_M	0.549	0.31
262_V	265_N	0.548	0.31
273_C	284_V	0.548	0.31
309_Q	312_L	0.546	0.31
275_V	354_S	0.546	0.31
51_Q	81_L	0.545	0.31
117_R	343_M	0.545	0.31
114_K	154_S	0.543	0.30
93_L	284_V	0.543	0.30
123_M	221_I	0.543	0.30
74_P	77_T	0.542	0.30
343_M	346_M	0.541	0.30
27_S	241_N	0.541	0.30
318_S	326_A	0.540	0.30
186_N	284_V	0.540	0.30
64_N	112_N	0.540	0.30
200_I	242_M	0.539	0.30
17_A	95_P	0.537	0.30
72_T	288_A	0.536	0.30
242_M	250_D	0.535	0.30
92_S	95_P	0.533	0.30
327_S	357_C	0.532	0.29
225_V	228_G	0.532	0.29
101_Q	334_A	0.531	0.29
37_I	200_I	0.531	0.29
120_T	156_Q	0.531	0.29
101_Q	188_Q	0.530	0.29
10_L	14_T	0.529	0.29
105_V	169_A	0.528	0.29
140_N	162_G	0.528	0.29
275_V	340_A	0.526	0.29
88_M	110_M	0.526	0.29
13_V	224_R	0.525	0.29
261_S	363_E	0.524	0.29
31_V	93_L	0.522	0.29
163_G	227_S	0.522	0.29
6_S	10_L	0.521	0.29
179_F	232_Q	0.521	0.29
317_G	324_S	0.520	0.29
68_Q	331_V	0.520	0.29
353_Q	361_K	0.517	0.28
255_I	325_S	0.517	0.28
144_G	255_I	0.516	0.28
319_L	342_P	0.516	0.28
25_L	61_T	0.516	0.28
262_V	269_T	0.515	0.28
123_M	130_D	0.515	0.28
28_V	91_A	0.515	0.28
220_T	231_S	0.515	0.28
41_L	65_M	0.515	0.28
328_L	332_V	0.514	0.28
146_A	157_V	0.513	0.28
109_S	258_R	0.513	0.28
214_T	224_R	0.511	0.28
93_L	96_F	0.509	0.28
127_K	352_M	0.509	0.28
211_G	214_T	0.508	0.28
35_S	221_I	0.507	0.28
340_A	362_L	0.507	0.28
193_D	217_D	0.506	0.28
37_I	65_M	0.505	0.27
238_D	276_A	0.504	0.27
277_Q	333_R	0.502	0.27
296_P	322_V	0.502	0.27
64_N	331_V	0.502	0.27
140_N	327_S	0.501	0.27
193_D	241_N	0.501	0.27
37_I	175_L	0.500	0.27

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4p8nA	1	0.3589	30.5	0.977	Contact Map
3smaA	2	0.1315	24.6	0.978	Contact Map
2kueA	1	0.3507	13.1	0.981	Contact Map
1a62A	1	0.1397	8.7	0.982	Contact Map
1g6uA	3	0.1151	8.5	0.983	Contact Map
2pn6A	5	0.1397	7.6	0.983	Contact Map
4g08A	1	0.3726	7.1	0.983	Contact Map
2kufA	1	0.3397	7.1	0.983	Contact Map
2ma3A	1	0.2274	7	0.983	Contact Map
4un2B	1	0.1123	6.8	0.983	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0106 seconds.