DER - ECOLI - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

DER - GTPase Der

UniProt:	P0A6P5	Sequences: MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREKPTFLVANKTDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLLPWMEDLAPQEEVDEDAEYWAQFEAEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMGSPIRIQFKEGENPYANKRNTLTPTQMRKRKRLMKHIKKNK	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG14207
Length:	490 (431)
Sequences:	2871 (1481)
Seq/√Len:	71.3

ECOLI - DER
BACSU - DER

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
289_M	319_V	4.454	1.00
252_Y	369_R	3.841	1.00
157_H	160_L	3.761	1.00
86_L	116_V	3.585	1.00
250_R	369_R	3.438	1.00
208_V	309_I	3.315	1.00
246_E	251_E	3.183	1.00
206_A	285_A	3.128	1.00
441_Y	444_K	3.032	1.00
221_R	358_G	2.992	1.00
207_I	219_T	2.932	1.00
335_K	339_D	2.863	1.00
260_V	278_T	2.829	1.00
285_A	288_V	2.806	1.00
246_E	249_G	2.806	1.00
100_E	134_S	2.727	1.00
91_A	120_T	2.724	1.00
91_A	117_A	2.686	1.00
388_M	410_A	2.672	1.00
86_L	158_V	2.636	1.00
21_R	148_G	2.560	1.00
67_V	71_M	2.493	1.00
219_T	228_V	2.493	1.00
419_I	456_Q	2.448	1.00
365_F	368_V	2.437	1.00
23_T	27_D	2.434	1.00
23_T	43_G	2.432	1.00
202_P	253_V	2.399	1.00
427_V	459_E	2.377	1.00
317_V	371_A	2.353	1.00
6_A	82_A	2.347	1.00
254_L	368_V	2.302	1.00
255_I	284_D	2.211	1.00
435_K	457_F	2.187	1.00
309_I	316_L	2.176	1.00
205_L	368_V	2.151	1.00
419_I	454_R	2.105	1.00
303_L	341_R	2.102	1.00
430_L	457_F	2.078	1.00
204_K	255_I	2.063	1.00
315_S	371_A	2.052	1.00
260_V	275_V	2.035	1.00
115_L	140_I	2.026	1.00
336_E	340_F	2.007	1.00
5_V	158_V	1.993	1.00
89_V	115_L	1.987	1.00
242_Y	284_D	1.971	1.00
46_E	49_G	1.967	1.00
319_V	351_H	1.958	1.00
320_V	352_F	1.957	1.00
374_S	447_D	1.944	1.00
40_R	74_Q	1.939	1.00
332_E	336_E	1.928	1.00
387_I	446_L	1.903	1.00
410_A	422_I	1.893	1.00
88_M	143_I	1.886	1.00
290_L	306_L	1.883	1.00
84_V	158_V	1.879	1.00
22_L	45_A	1.867	1.00
240_S	281_A	1.835	1.00
44_R	51_E	1.834	1.00
5_V	84_V	1.820	1.00
376_T	416_N	1.788	1.00
282_I	288_V	1.753	1.00
283_E	312_S	1.746	1.00
315_S	375_S	1.733	1.00
18_L	145_A	1.728	1.00
411_H	423_H	1.700	1.00
261_R	271_E	1.700	1.00
313_G	454_R	1.700	1.00
387_I	445_S	1.699	1.00
319_V	364_L	1.698	1.00
121_D	149_R	1.697	1.00
377_R	447_D	1.695	1.00
306_L	345_I	1.695	1.00
208_V	282_I	1.690	1.00
358_G	361_V	1.682	1.00
413_G	421_V	1.672	1.00
364_L	368_V	1.654	1.00
351_H	367_S	1.645	0.99
422_I	457_F	1.640	0.99
79_I	109_R	1.638	0.99
408_K	460_G	1.633	0.99
28_A	41_K	1.631	0.99
349_R	371_A	1.630	0.99
157_H	161_P	1.626	0.99
244_P	253_V	1.622	0.99
84_V	114_F	1.596	0.99
47_I	155_L	1.591	0.99
333_Q	337_T	1.573	0.99
221_R	361_V	1.564	0.99
332_E	335_K	1.551	0.99
372_Y	376_T	1.531	0.99
387_I	391_A	1.531	0.99
381_T	385_T	1.524	0.99
79_I	85_V	1.519	0.99
279_L	308_F	1.503	0.99
410_A	420_V	1.500	0.99
18_L	88_M	1.483	0.99
31_A	36_L	1.479	0.99
260_V	305_L	1.463	0.99
73_E	226_E	1.458	0.99
137_L	140_I	1.447	0.99
319_V	353_I	1.446	0.99
205_L	254_L	1.444	0.99
316_L	345_I	1.437	0.99
204_K	253_V	1.436	0.99
50_R	163_M	1.436	0.99
70_R	73_E	1.434	0.99
141_Y	157_H	1.427	0.99
5_V	45_A	1.422	0.98
152_L	156_E	1.421	0.98
407_L	422_I	1.418	0.98
84_V	162_W	1.414	0.98
294_A	326_L	1.413	0.98
223_L	245_M	1.411	0.98
203_I	372_Y	1.400	0.98
290_L	309_I	1.396	0.98
289_M	368_V	1.394	0.98
391_A	441_Y	1.393	0.98
290_L	316_L	1.390	0.98
50_R	164_E	1.379	0.98
381_T	409_Y	1.375	0.98
218_L	361_V	1.375	0.98
367_S	370_E	1.371	0.98
203_I	252_Y	1.359	0.98
290_L	318_I	1.347	0.98
391_A	438_L	1.343	0.98
218_L	291_V	1.330	0.98
42_Y	81_E	1.329	0.98
370_E	447_D	1.324	0.98
40_R	78_A	1.309	0.97
328_Q	331_K	1.308	0.97
90_D	93_A	1.306	0.97
45_A	52_F	1.301	0.97
349_R	370_E	1.299	0.97
114_F	141_Y	1.283	0.97
384_L	410_A	1.282	0.97
353_I	364_L	1.278	0.97
289_M	364_L	1.278	0.97
244_P	251_E	1.273	0.97
47_I	156_E	1.270	0.97
317_V	351_H	1.261	0.97
5_V	52_F	1.251	0.97
148_G	151_V	1.247	0.97
23_T	54_C	1.239	0.96
405_V	424_G	1.218	0.96
67_V	70_R	1.215	0.96
379_V	448_V	1.215	0.96
27_D	43_G	1.212	0.96
248_D	366_E	1.208	0.96
202_P	244_P	1.203	0.96
84_V	161_P	1.202	0.96
92_R	125_P	1.197	0.96
397_P	434_Y	1.193	0.96
129_V	142_P	1.188	0.95
223_L	228_V	1.183	0.95
339_D	350_V	1.183	0.95
44_R	53_I	1.178	0.95
94_G	131_D	1.176	0.95
375_S	416_N	1.172	0.95
391_A	437_Y	1.172	0.95
5_V	159_L	1.172	0.95
74_Q	78_A	1.166	0.95
388_M	407_L	1.162	0.95
17_T	145_A	1.157	0.95
374_S	377_R	1.155	0.95
207_I	228_V	1.155	0.95
371_A	451_S	1.153	0.95
424_G	427_V	1.153	0.95
47_I	152_L	1.148	0.94
377_R	448_V	1.136	0.94
320_V	334_V	1.133	0.94
116_V	143_I	1.131	0.94
104_K	107_R	1.125	0.94
100_E	104_K	1.122	0.94
298_I	342_L	1.121	0.94
334_V	338_L	1.121	0.94
307_G	348_A	1.120	0.94
104_K	108_S	1.116	0.94
247_R	365_F	1.110	0.93
4_V	53_I	1.103	0.93
218_L	353_I	1.101	0.93
50_R	159_L	1.097	0.93
294_A	320_V	1.090	0.93
321_N	355_A	1.088	0.93
310_L	347_F	1.085	0.93
337_T	341_R	1.080	0.92
295_R	325_G	1.079	0.92
114_F	157_H	1.079	0.92
61_D	71_M	1.076	0.92
22_L	52_F	1.073	0.92
79_I	105_H	1.073	0.92
250_R	373_D	1.070	0.92
363_N	366_E	1.067	0.92
81_E	382_S	1.063	0.92
333_Q	336_E	1.059	0.92
405_V	430_L	1.058	0.92
300_D	304_S	1.057	0.92
440_N	444_K	1.057	0.92
379_V	446_L	1.054	0.92
252_Y	365_F	1.051	0.91
374_S	450_G	1.050	0.91
139_E	157_H	1.045	0.91
231_Y	236_T	1.039	0.91
208_V	305_L	1.036	0.91
370_E	374_S	1.029	0.90
91_A	128_A	1.029	0.90
77_L	80_E	1.026	0.90
378_R	411_H	1.020	0.90
378_R	415_Y	1.020	0.90
403_R	426_Q	1.020	0.90
71_M	75_S	1.016	0.90
407_L	430_L	1.015	0.90
395_H	437_Y	1.015	0.90
89_V	132_F	1.014	0.90
349_R	449_M	1.013	0.90
114_F	161_P	1.010	0.90
198_P	253_V	1.009	0.90
405_V	426_Q	1.007	0.90
286_N	416_N	0.996	0.89
266_I	275_V	0.995	0.89
18_L	151_V	0.993	0.89
296_E	299_S	0.991	0.89
114_F	158_V	0.983	0.88
36_L	270_V	0.979	0.88
116_V	154_L	0.978	0.88
248_D	369_R	0.977	0.88
359_S	363_N	0.976	0.88
245_M	365_F	0.972	0.88
61_D	68_E	0.970	0.88
307_G	311_N	0.964	0.87
307_G	344_F	0.962	0.87
222_I	365_F	0.950	0.87
399_L	402_G	0.949	0.87
45_A	54_C	0.948	0.86
68_E	71_M	0.946	0.86
122_G	125_P	0.942	0.86
150_G	303_L	0.935	0.86
394_D	441_Y	0.930	0.85
337_T	340_F	0.928	0.85
7_L	86_L	0.927	0.85
414_G	419_I	0.925	0.85
42_Y	74_Q	0.922	0.85
203_I	369_R	0.921	0.85
70_R	229_V	0.919	0.85
403_R	429_D	0.919	0.85
131_D	134_S	0.918	0.85
10_R	13_V	0.917	0.85
95_L	134_S	0.914	0.84
81_E	280_Q	0.912	0.84
247_R	252_Y	0.912	0.84
388_M	442_F	0.909	0.84
383_M	386_R	0.907	0.84
46_E	51_E	0.906	0.84
68_E	98_A	0.905	0.84
292_I	297_G	0.904	0.84
426_Q	429_D	0.899	0.83
313_G	417_P	0.897	0.83
275_V	278_T	0.890	0.83
377_R	383_M	0.888	0.83
273_F	277_K	0.886	0.83
432_D	435_K	0.885	0.82
113_T	137_L	0.885	0.82
398_P	402_G	0.881	0.82
421_V	456_Q	0.873	0.82
282_I	309_I	0.873	0.82
275_V	279_L	0.872	0.82
5_V	86_L	0.869	0.81
103_A	137_L	0.868	0.81
390_M	445_S	0.864	0.81
314_R	375_S	0.864	0.81
400_V	429_D	0.863	0.81
318_I	342_L	0.861	0.81
240_S	255_I	0.860	0.81
95_L	115_L	0.859	0.81
126_D	149_R	0.855	0.80
329_E	332_E	0.855	0.80
200_S	251_E	0.854	0.80
289_M	353_I	0.853	0.80
247_R	250_R	0.852	0.80
291_V	319_V	0.851	0.80
25_T	43_G	0.851	0.80
245_M	254_L	0.851	0.80
373_D	377_R	0.851	0.80
420_V	442_F	0.850	0.80
390_M	393_E	0.850	0.80
213_V	296_E	0.847	0.80
387_I	442_F	0.844	0.79
42_Y	53_I	0.842	0.79
52_F	155_L	0.840	0.79
405_V	429_D	0.838	0.79
117_A	132_F	0.833	0.78
335_K	352_F	0.830	0.78
18_L	154_L	0.830	0.78
219_T	254_L	0.829	0.78
9_G	14_G	0.828	0.78
318_I	350_V	0.828	0.78
264_G	304_S	0.828	0.78
421_V	458_K	0.825	0.78
115_L	135_L	0.825	0.78
336_E	341_R	0.822	0.78
103_A	138_G	0.819	0.77
351_H	364_L	0.818	0.77
9_G	15_K	0.818	0.77
121_D	144_A	0.816	0.77
58_G	71_M	0.815	0.77
222_I	245_M	0.815	0.77
435_K	439_M	0.811	0.77
97_P	100_E	0.806	0.76
160_L	163_M	0.806	0.76
29_L	277_K	0.803	0.76
254_L	282_I	0.803	0.76
22_L	54_C	0.799	0.76
93_A	97_P	0.799	0.76
369_R	373_D	0.799	0.76
76_L	79_I	0.798	0.75
219_T	243_I	0.797	0.75
372_Y	375_S	0.795	0.75
117_A	138_G	0.794	0.75
210_R	299_S	0.794	0.75
66_G	233_M	0.790	0.75
392_V	397_P	0.790	0.75
158_V	161_P	0.788	0.75
215_K	256_D	0.788	0.75
49_G	104_K	0.787	0.74
33_F	270_V	0.786	0.74
252_Y	368_V	0.785	0.74
60_I	75_S	0.783	0.74
63_T	98_A	0.783	0.74
254_L	365_F	0.778	0.74
336_E	350_V	0.771	0.73
261_R	266_I	0.771	0.73
76_L	80_E	0.770	0.73
370_E	449_M	0.769	0.73
385_T	409_Y	0.767	0.73
295_R	320_V	0.763	0.72
63_T	66_G	0.762	0.72
434_Y	437_Y	0.760	0.72
348_A	451_S	0.759	0.72
378_R	458_K	0.758	0.72
117_A	140_I	0.758	0.72
263_R	279_L	0.755	0.71
8_V	85_V	0.752	0.71
380_G	383_M	0.752	0.71
40_R	81_E	0.747	0.71
6_A	55_I	0.747	0.71
287_V	315_S	0.746	0.70
245_M	345_I	0.743	0.70
106_L	113_T	0.743	0.70
402_G	405_V	0.741	0.70
219_T	223_L	0.741	0.70
242_Y	253_V	0.740	0.70
113_T	164_E	0.739	0.70
76_L	105_H	0.739	0.70
264_G	275_V	0.738	0.70
353_I	356_L	0.738	0.70
57_T	78_A	0.737	0.70
228_V	243_I	0.735	0.69
33_F	36_L	0.734	0.69
89_V	95_L	0.730	0.69
412_A	415_Y	0.730	0.69
121_D	126_D	0.730	0.69
205_L	245_M	0.730	0.69
201_L	251_E	0.727	0.68
261_R	301_Q	0.725	0.68
222_I	361_V	0.724	0.68
221_R	291_V	0.724	0.68
133_Y	320_V	0.722	0.68
371_A	374_S	0.722	0.68
95_L	131_D	0.722	0.68
22_L	43_G	0.721	0.68
367_S	371_A	0.721	0.68
132_F	135_L	0.717	0.67
293_D	296_E	0.712	0.67
152_L	155_L	0.711	0.67
26_R	30_V	0.710	0.67
287_V	375_S	0.710	0.67
214_G	256_D	0.710	0.67
219_T	260_V	0.709	0.67
298_I	338_L	0.707	0.66
49_G	155_L	0.707	0.66
418_P	451_S	0.701	0.66
264_G	342_L	0.700	0.66
313_G	375_S	0.699	0.65
10_R	96_M	0.698	0.65
275_V	301_Q	0.696	0.65
203_I	368_V	0.694	0.65
117_A	142_P	0.693	0.65
282_I	312_S	0.691	0.65
401_R	429_D	0.691	0.65
123_L	149_R	0.691	0.65
318_I	345_I	0.690	0.64
317_V	367_S	0.688	0.64
72_A	76_L	0.686	0.64
9_G	12_N	0.685	0.64
442_F	446_L	0.682	0.64
320_V	338_L	0.681	0.63
327_S	330_V	0.680	0.63
45_A	162_W	0.680	0.63
40_R	57_T	0.679	0.63
329_E	333_Q	0.679	0.63
6_A	78_A	0.676	0.63
92_R	122_G	0.673	0.62
238_R	270_V	0.673	0.62
223_L	243_I	0.672	0.62
153_S	156_E	0.672	0.62
52_F	156_E	0.672	0.62
291_V	355_A	0.669	0.62
104_K	134_S	0.668	0.62
382_S	386_R	0.668	0.62
120_T	128_A	0.667	0.62
221_R	357_H	0.667	0.62
308_F	311_N	0.666	0.62
75_S	231_Y	0.664	0.61
310_L	345_I	0.663	0.61
34_P	299_S	0.663	0.61
412_A	418_P	0.661	0.61
164_E	195_D	0.660	0.61
48_E	159_L	0.658	0.61
40_R	77_L	0.657	0.61
130_V	133_Y	0.657	0.61
30_V	282_I	0.657	0.61
142_P	263_R	0.656	0.61
40_R	55_I	0.656	0.61
398_P	431_P	0.655	0.60
75_S	79_I	0.654	0.60
247_R	369_R	0.652	0.60
26_R	283_E	0.651	0.60
329_E	360_G	0.650	0.60
228_V	241_I	0.649	0.60
61_D	72_A	0.648	0.60
203_I	250_R	0.648	0.60
144_A	149_R	0.647	0.59
9_G	16_S	0.645	0.59
431_P	440_N	0.642	0.59
221_R	355_A	0.641	0.59
141_Y	150_G	0.639	0.59
31_A	269_A	0.639	0.59
43_G	54_C	0.639	0.59
28_A	43_G	0.638	0.58
424_G	457_F	0.637	0.58
323_W	360_G	0.636	0.58
409_Y	423_H	0.636	0.58
334_V	352_F	0.636	0.58
422_I	430_L	0.635	0.58
216_S	220_N	0.634	0.58
342_L	345_I	0.633	0.58
391_A	445_S	0.631	0.58
204_K	286_N	0.631	0.58
266_I	301_Q	0.630	0.57
269_A	272_K	0.629	0.57
112_P	161_P	0.628	0.57
7_L	88_M	0.628	0.57
295_R	326_L	0.628	0.57
57_T	74_Q	0.628	0.57
328_Q	359_S	0.628	0.57
49_G	159_L	0.627	0.57
114_F	130_V	0.625	0.57
62_G	382_S	0.624	0.57
218_L	364_L	0.623	0.57
210_R	280_Q	0.622	0.56
360_G	386_R	0.622	0.56
216_S	237_T	0.621	0.56
418_P	452_P	0.620	0.56
68_E	72_A	0.617	0.56
60_I	82_A	0.617	0.56
7_L	19_F	0.615	0.56
198_P	201_L	0.611	0.55
237_T	259_G	0.611	0.55
374_S	449_M	0.611	0.55
155_L	158_V	0.609	0.55
148_G	152_L	0.609	0.55
16_S	20_N	0.608	0.55
378_R	382_S	0.607	0.55
289_M	317_V	0.607	0.55
101_A	205_L	0.606	0.55
384_L	420_V	0.606	0.55
432_D	440_N	0.605	0.54
422_I	455_I	0.604	0.54
443_R	452_P	0.603	0.54
6_A	57_T	0.603	0.54
396_Q	434_Y	0.602	0.54
393_E	432_D	0.602	0.54
288_V	314_R	0.601	0.54
217_T	353_I	0.601	0.54
61_D	234_P	0.601	0.54
330_V	360_G	0.601	0.54
115_L	138_G	0.601	0.54
60_I	230_V	0.600	0.54
438_L	457_F	0.600	0.54
19_F	43_G	0.599	0.54
21_R	147_H	0.599	0.54
213_V	338_L	0.599	0.54
27_D	41_K	0.598	0.54
10_R	99_D	0.598	0.54
381_T	411_H	0.597	0.53
143_I	151_V	0.597	0.53
328_Q	360_G	0.596	0.53
8_V	348_A	0.596	0.53
24_R	377_R	0.594	0.53
12_N	20_N	0.590	0.53
346_D	349_R	0.590	0.53
334_V	339_D	0.589	0.52
275_V	451_S	0.589	0.52
109_R	326_L	0.589	0.52
278_T	282_I	0.588	0.52
47_I	52_F	0.583	0.52
272_K	276_I	0.583	0.52
26_R	280_Q	0.581	0.51
116_V	129_V	0.581	0.51
219_T	404_R	0.580	0.51
47_I	153_S	0.579	0.51
269_A	273_F	0.578	0.51
120_T	149_R	0.578	0.51
87_F	106_L	0.577	0.51
97_P	101_A	0.576	0.51
410_A	438_L	0.576	0.51
419_I	424_G	0.575	0.51
270_V	274_S	0.575	0.51
362_G	366_E	0.572	0.50
344_F	375_S	0.571	0.50
392_V	437_Y	0.571	0.50
385_T	411_H	0.571	0.50
217_T	355_A	0.570	0.50
6_A	79_I	0.569	0.50
94_G	103_A	0.569	0.50
399_L	403_R	0.569	0.50
54_C	158_V	0.569	0.50
73_E	225_E	0.568	0.50
21_R	151_V	0.565	0.50
114_F	154_L	0.565	0.50
165_D	195_D	0.565	0.50
417_P	454_R	0.565	0.50
288_V	406_K	0.564	0.49
47_I	159_L	0.564	0.49
298_I	380_G	0.563	0.49
307_G	431_P	0.563	0.49
277_K	280_Q	0.562	0.49
6_A	40_R	0.559	0.49
393_E	458_K	0.558	0.49
118_N	321_N	0.557	0.49
45_A	158_V	0.556	0.48
286_N	385_T	0.556	0.48
264_G	308_F	0.555	0.48
292_I	299_S	0.555	0.48
297_G	365_F	0.554	0.48
42_Y	55_I	0.554	0.48
151_V	394_D	0.554	0.48
82_A	285_A	0.554	0.48
5_V	116_V	0.552	0.48
432_D	436_R	0.550	0.48
386_R	389_T	0.548	0.47
211_P	301_Q	0.547	0.47
219_T	269_A	0.547	0.47
422_I	438_L	0.547	0.47
396_Q	436_R	0.546	0.47
359_S	366_E	0.545	0.47
361_V	367_S	0.545	0.47
156_E	159_L	0.545	0.47
212_N	322_K	0.545	0.47
92_R	97_P	0.543	0.47
404_R	430_L	0.540	0.46
103_A	113_T	0.539	0.46
63_T	69_T	0.539	0.46
216_S	259_G	0.539	0.46
340_F	343_G	0.538	0.46
358_G	441_Y	0.538	0.46
101_A	104_K	0.537	0.46
12_N	16_S	0.536	0.46
36_L	313_G	0.536	0.46
151_V	162_W	0.536	0.46
219_T	365_F	0.535	0.46
88_M	445_S	0.535	0.46
326_L	334_V	0.533	0.46
303_L	307_G	0.533	0.46
419_I	458_K	0.532	0.45
309_I	446_L	0.532	0.45
146_S	151_V	0.532	0.45
61_D	75_S	0.531	0.45
272_K	404_R	0.531	0.45
378_R	385_T	0.531	0.45
194_D	198_P	0.530	0.45
399_L	405_V	0.530	0.45
220_N	237_T	0.530	0.45
344_F	431_P	0.530	0.45
414_G	417_P	0.529	0.45
141_Y	158_V	0.527	0.45
446_L	450_G	0.526	0.45
230_V	277_K	0.525	0.45
270_V	273_F	0.524	0.45
121_D	140_I	0.524	0.45
303_L	343_G	0.524	0.45
43_G	150_G	0.523	0.44
93_A	96_M	0.522	0.44
47_I	148_G	0.522	0.44
160_L	165_D	0.522	0.44
379_V	420_V	0.521	0.44
94_G	132_F	0.520	0.44
103_A	139_E	0.520	0.44
209_G	214_G	0.520	0.44
6_A	75_S	0.519	0.44
214_G	237_T	0.519	0.44
9_G	13_V	0.519	0.44
83_D	207_I	0.517	0.44
269_A	277_K	0.517	0.44
121_D	304_S	0.517	0.44
42_Y	78_A	0.516	0.44
392_V	395_H	0.516	0.44
250_R	253_V	0.516	0.44
54_C	369_R	0.515	0.43
204_K	284_D	0.515	0.43
7_L	145_A	0.514	0.43
378_R	417_P	0.514	0.43
202_P	372_Y	0.513	0.43
7_L	54_C	0.512	0.43
25_T	276_I	0.512	0.43
26_R	146_S	0.512	0.43
22_L	151_V	0.511	0.43
58_G	236_T	0.511	0.43
62_G	303_L	0.511	0.43
313_G	371_A	0.510	0.43
374_S	448_V	0.509	0.43
286_N	372_Y	0.508	0.43
280_Q	289_M	0.508	0.43
310_L	315_S	0.508	0.43
6_A	74_Q	0.508	0.43
309_I	312_S	0.506	0.42
236_T	277_K	0.506	0.42
271_E	301_Q	0.506	0.42
56_D	59_G	0.506	0.42
216_S	256_D	0.505	0.42
224_G	358_G	0.505	0.42
14_G	20_N	0.504	0.42
111_K	228_V	0.504	0.42
288_V	395_H	0.504	0.42
418_P	443_R	0.503	0.42
240_S	397_P	0.503	0.42
44_R	129_V	0.503	0.42
266_I	305_L	0.502	0.42
228_V	245_M	0.502	0.42
418_P	436_R	0.501	0.42
291_V	353_I	0.501	0.42
114_F	160_L	0.501	0.42
124_D	134_S	0.501	0.42
412_A	420_V	0.500	0.42

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3j8gX	1	0.851	100	0.293	Contact Map
1mkyA	1	0.8184	100	0.306	Contact Map
4dcuA	1	0.8122	100	0.309	Contact Map
3j65o	1	0.6673	100	0.687	Contact Map
4fidA	1	0.5204	100	0.732	Contact Map
4xc8A	2	0.8592	100	0.748	Contact Map
1egaA	2	0.5551	100	0.756	Contact Map
3ec1A	1	0.5939	100	0.76	Contact Map
3zvrA	1	0.6163	100	0.772	Contact Map
3h2yA	1	0.5939	100	0.78	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0126 seconds.