UBIB - ECOLI - GREMLIN Contacts

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UBIB - Probable protein kinase UbiB

UniProt:	P0A6A0	Sequences: MTPGEVRRLYFIIRTFLSYGLDELIPKMRITLPLRLWRYSLFWMPNRHKDKLLGERLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDGKLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLARWVPRLLPDGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIFEKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLESWIKDQVGIPALVRAFKEKAPFWVEKMPELPELVYDSLRQGKYLQHSVDKIARELQSNHVRQGQSRYFLGIGATLVLSGTFLLVSRPEWGLMPGWLMAGGLIAWFVGWRKTR	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG11476
Length:	546 (447)
Sequences:	4633 (2904)
Seq/√Len:	137.4

ECOLI - UBIB
HALSA - Q9HP76
SULSO - Q97VL8

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
124_D	142_R	5.215	1.00
112_A	239_G	4.882	1.00
214_I	233_P	4.301	1.00
140_T	149_E	4.023	1.00
258_E	264_M	3.735	1.00
219_N	282_D	3.643	1.00
125_F	152_I	3.598	1.00
136_A	206_L	3.558	1.00
140_T	245_R	3.440	1.00
215_Q	316_S	3.348	1.00
266_L	270_R	3.133	1.00
148_K	232_Y	3.113	1.00
110_E	117_P	3.107	1.00
295_F	309_I	3.069	1.00
149_E	247_Y	3.022	1.00
106_K	119_E	2.938	1.00
112_A	237_S	2.935	1.00
100_F	105_A	2.932	1.00
125_F	141_A	2.891	1.00
106_K	110_E	2.885	1.00
246_I	307_I	2.860	1.00
148_K	230_E	2.856	1.00
54_G	86_I	2.844	1.00
123_D	144_K	2.825	1.00
142_R	149_E	2.810	1.00
210_S	233_P	2.793	1.00
297_S	305_K	2.777	1.00
297_S	307_I	2.739	1.00
171_Y	197_E	2.601	1.00
106_K	127_I	2.522	1.00
84_P	88_D	2.516	1.00
265_K	420_Y	2.487	1.00
164_K	201_I	2.484	1.00
213_A	231_V	2.470	1.00
116_L	120_A	2.456	1.00
151_V	245_R	2.455	1.00
253_D	256_A	2.455	1.00
123_D	142_R	2.426	1.00
227_Y	244_E	2.407	1.00
58_R	89_Q	2.349	1.00
160_L	238_E	2.335	1.00
110_E	118_V	2.238	1.00
101_D	104_L	2.219	1.00
130_L	151_V	2.216	1.00
249_I	260_N	2.207	1.00
126_E	140_T	2.135	1.00
152_I	240_M	2.117	1.00
277_T	281_R	2.113	1.00
336_D	339_K	2.101	1.00
231_V	243_M	2.095	1.00
277_T	282_D	2.094	1.00
225_M	270_R	2.053	1.00
55_E	89_Q	2.051	1.00
109_I	154_V	2.039	1.00
331_A	339_K	2.034	1.00
155_I	239_G	2.018	1.00
150_V	242_V	2.016	1.00
233_P	236_C	1.950	1.00
217_R	230_E	1.939	1.00
111_A	239_G	1.926	1.00
141_A	152_I	1.902	1.00
424_D	427_K	1.899	1.00
116_L	121_W	1.886	1.00
232_Y	244_E	1.867	1.00
143_L	146_N	1.857	1.00
107_Q	111_A	1.847	1.00
327_E	339_K	1.832	1.00
338_R	360_E	1.829	1.00
95_D	250_P	1.819	1.00
171_Y	194_R	1.816	1.00
155_I	206_L	1.805	1.00
210_S	236_C	1.778	1.00
105_A	139_H	1.767	1.00
318_N	321_D	1.759	1.00
297_S	303_N	1.755	1.00
102_G	105_A	1.737	1.00
76_S	94_Q	1.726	1.00
227_Y	305_K	1.721	1.00
117_P	120_A	1.715	1.00
109_I	113_M	1.709	1.00
79_R	82_F	1.708	1.00
122_F	242_V	1.708	1.00
102_G	127_I	1.707	1.00
109_I	121_W	1.703	1.00
232_Y	235_Y	1.685	1.00
181_L	184_G	1.681	1.00
213_A	243_M	1.662	1.00
102_G	106_K	1.639	1.00
218_R	221_E	1.639	1.00
223_S	277_T	1.635	1.00
294_I	308_G	1.624	1.00
113_M	242_V	1.621	1.00
355_N	358_E	1.610	1.00
210_S	231_V	1.587	1.00
236_C	242_V	1.558	1.00
143_L	150_V	1.547	1.00
141_A	150_V	1.546	1.00
214_I	217_R	1.544	1.00
254_V	258_E	1.523	1.00
331_A	340_V	1.516	1.00
256_A	260_N	1.502	1.00
188_R	191_E	1.493	1.00
100_F	156_R	1.486	1.00
109_I	118_V	1.474	1.00
273_Q	428_T	1.462	1.00
283_S	322_K	1.458	1.00
287_A	313_I	1.449	1.00
217_R	227_Y	1.434	1.00
274_V	308_G	1.426	1.00
72_G	93_L	1.424	1.00
207_L	238_E	1.416	1.00
227_Y	297_S	1.404	1.00
57_L	90_L	1.402	1.00
205_N	238_E	1.397	1.00
210_S	241_M	1.397	1.00
121_W	235_Y	1.392	1.00
89_Q	92_L	1.390	1.00
178_P	188_R	1.384	1.00
104_L	107_Q	1.369	1.00
120_A	144_K	1.365	1.00
160_L	164_K	1.363	1.00
178_P	190_T	1.357	1.00
271_G	416_G	1.356	1.00
130_L	245_R	1.350	1.00
202_D	208_R	1.347	1.00
152_I	242_V	1.343	1.00
247_Y	302_E	1.337	1.00
58_R	62_Q	1.336	1.00
143_L	232_Y	1.334	1.00
109_I	125_F	1.303	1.00
123_D	146_N	1.296	1.00
284_F	314_V	1.296	1.00
256_A	259_K	1.294	1.00
257_L	261_G	1.293	1.00
285_F	315_G	1.289	1.00
257_L	264_M	1.289	1.00
254_V	264_M	1.285	1.00
118_V	125_F	1.282	1.00
106_K	125_F	1.281	1.00
167_L	197_E	1.265	1.00
197_E	201_I	1.260	1.00
227_Y	246_I	1.259	1.00
215_Q	284_F	1.253	1.00
122_F	141_A	1.252	1.00
106_K	118_V	1.245	1.00
246_I	297_S	1.239	1.00
270_R	306_Y	1.237	1.00
265_K	422_Q	1.236	1.00
122_F	125_F	1.236	1.00
102_G	125_F	1.228	1.00
132_S	156_R	1.227	1.00
376_A	422_Q	1.224	1.00
324_Y	346_D	1.223	1.00
174_A	190_T	1.222	1.00
423_L	428_T	1.218	1.00
225_M	273_Q	1.216	1.00
230_E	244_E	1.216	1.00
257_L	262_T	1.198	1.00
251_V	296_V	1.192	1.00
51_K	55_E	1.189	1.00
228_I	314_V	1.188	1.00
158_D	162_V	1.179	0.99
109_I	240_M	1.178	0.99
155_I	160_L	1.175	0.99
216_L	311_C	1.170	0.99
192_V	403_V	1.167	0.99
88_D	91_A	1.166	0.99
257_L	263_N	1.157	0.99
174_A	193_V	1.148	0.99
51_K	88_D	1.148	0.99
255_A	258_E	1.145	0.99
102_G	118_V	1.133	0.99
175_R	190_T	1.132	0.99
105_A	154_V	1.130	0.99
328_N	340_V	1.124	0.99
227_Y	307_I	1.123	0.99
430_K	434_E	1.119	0.99
362_A	394_F	1.119	0.99
22_D	56_R	1.114	0.99
55_E	58_R	1.098	0.99
324_Y	343_L	1.097	0.99
255_A	259_K	1.096	0.99
108_Q	112_A	1.088	0.99
113_M	122_F	1.080	0.99
327_E	346_D	1.075	0.99
151_V	243_M	1.074	0.99
262_T	267_L	1.066	0.99
82_F	87_A	1.058	0.99
268_A	419_L	1.056	0.99
121_W	242_V	1.052	0.99
143_L	235_Y	1.046	0.99
225_M	305_K	1.046	0.99
435_S	439_D	1.040	0.99
207_L	236_C	1.039	0.99
120_A	123_D	1.039	0.99
15_T	60_A	1.038	0.99
331_A	343_L	1.037	0.99
119_E	127_I	1.037	0.99
274_V	278_Q	1.036	0.99
138_V	151_V	1.034	0.99
249_I	253_D	1.033	0.99
207_L	211_A	1.026	0.99
61_L	72_G	1.024	0.99
163_I	200_L	1.023	0.99
117_P	121_W	1.018	0.99
143_L	148_K	1.014	0.98
211_A	233_P	1.013	0.98
57_L	86_I	1.012	0.98
339_K	343_L	1.011	0.98
94_Q	250_P	1.010	0.98
246_I	295_F	1.008	0.98
53_L	86_I	1.003	0.98
95_D	295_F	0.996	0.98
267_L	296_V	0.996	0.98
279_V	405_L	0.993	0.98
453_K	466_E	0.993	0.98
126_E	130_L	0.992	0.98
62_Q	92_L	0.982	0.98
113_M	240_M	0.979	0.98
55_E	92_L	0.976	0.98
160_L	239_G	0.975	0.98
374_P	377_E	0.973	0.98
220_F	308_G	0.970	0.98
281_R	435_S	0.962	0.98
269_E	273_Q	0.959	0.98
249_I	256_A	0.956	0.98
59_L	62_Q	0.955	0.98
82_F	90_L	0.943	0.98
266_L	269_E	0.943	0.98
148_K	244_E	0.942	0.98
92_L	96_K	0.939	0.97
330_I	334_N	0.938	0.97
243_M	309_I	0.938	0.97
457_W	461_M	0.934	0.97
100_F	157_P	0.933	0.97
123_D	147_G	0.931	0.97
66_P	413_E	0.928	0.97
213_A	311_C	0.926	0.97
268_A	420_Y	0.926	0.97
83_P	86_I	0.922	0.97
65_G	68_W	0.921	0.97
100_F	108_Q	0.915	0.97
442_G	445_A	0.909	0.97
94_Q	292_G	0.909	0.97
210_S	214_I	0.908	0.97
219_N	284_F	0.906	0.97
212_N	314_V	0.906	0.97
338_R	342_E	0.904	0.97
460_K	465_P	0.903	0.97
215_Q	219_N	0.900	0.97
151_V	309_I	0.895	0.97
113_M	116_L	0.890	0.97
47_R	85_H	0.889	0.96
457_W	460_K	0.887	0.96
359_F	362_A	0.886	0.96
260_N	263_N	0.886	0.96
149_E	245_R	0.885	0.96
235_Y	242_V	0.878	0.96
342_E	356_V	0.876	0.96
212_N	284_F	0.875	0.96
317_L	405_L	0.874	0.96
231_V	236_C	0.874	0.96
339_K	342_E	0.867	0.96
274_V	306_Y	0.865	0.96
340_V	363_I	0.865	0.96
55_E	59_L	0.865	0.96
271_G	306_Y	0.864	0.96
265_K	269_E	0.856	0.96
194_R	197_E	0.849	0.95
287_A	404_L	0.848	0.95
167_L	201_I	0.848	0.95
458_V	462_P	0.847	0.95
323_R	327_E	0.842	0.95
118_V	121_W	0.839	0.95
140_T	151_V	0.834	0.95
281_R	432_F	0.833	0.95
263_N	266_L	0.833	0.95
320_E	346_D	0.832	0.95
25_I	29_R	0.828	0.95
228_I	311_C	0.827	0.95
52_L	56_R	0.825	0.95
211_A	214_I	0.825	0.95
311_C	314_V	0.815	0.94
308_G	314_V	0.814	0.94
214_I	218_R	0.814	0.94
343_L	347_S	0.814	0.94
287_A	315_G	0.813	0.94
53_L	85_H	0.812	0.94
58_R	92_L	0.809	0.94
216_L	278_Q	0.808	0.94
345_V	356_V	0.804	0.94
113_M	121_W	0.802	0.94
216_L	220_F	0.799	0.94
133_A	203_E	0.799	0.94
220_F	278_Q	0.793	0.93
379_S	382_H	0.790	0.93
342_E	346_D	0.789	0.93
104_L	108_Q	0.786	0.93
388_F	391_A	0.784	0.93
226_L	308_G	0.782	0.93
334_N	430_K	0.781	0.93
264_M	267_L	0.780	0.93
321_D	401_Q	0.777	0.93
75_L	82_F	0.773	0.93
447_V	451_K	0.772	0.93
216_L	314_V	0.771	0.92
190_T	194_R	0.768	0.92
425_L	428_T	0.766	0.92
94_Q	291_P	0.765	0.92
462_P	465_P	0.765	0.92
57_L	61_L	0.765	0.92
355_N	363_I	0.764	0.92
407_K	411_Y	0.764	0.92
40_S	43_W	0.760	0.92
341_A	363_I	0.759	0.92
319_K	322_K	0.757	0.92
50_D	85_H	0.757	0.92
143_L	147_G	0.756	0.92
260_N	264_M	0.755	0.92
111_A	422_Q	0.755	0.92
130_L	139_H	0.754	0.92
122_F	152_I	0.752	0.92
370_I	386_N	0.749	0.91
220_F	274_V	0.747	0.91
103_K	127_I	0.745	0.91
454_A	458_V	0.745	0.91
219_N	277_T	0.744	0.91
78_R	413_E	0.742	0.91
22_D	52_L	0.742	0.91
214_I	230_E	0.741	0.91
83_P	87_A	0.740	0.91
121_W	143_L	0.738	0.91
12_I	68_W	0.737	0.91
9_L	169_L	0.737	0.91
155_I	238_E	0.737	0.91
275_F	412_V	0.736	0.91
69_I	97_V	0.735	0.91
254_V	418_Q	0.731	0.90
171_Y	190_T	0.724	0.90
143_L	242_V	0.724	0.90
52_L	55_E	0.724	0.90
348_G	396_M	0.723	0.90
450_F	454_A	0.722	0.90
381_G	384_L	0.722	0.90
434_E	438_K	0.721	0.90
457_W	465_P	0.719	0.90
374_P	422_Q	0.719	0.90
159_I	162_V	0.718	0.90
51_K	89_Q	0.717	0.89
341_A	360_E	0.716	0.89
226_L	274_V	0.715	0.89
456_F	465_P	0.714	0.89
121_W	240_M	0.711	0.89
62_Q	65_G	0.711	0.89
168_K	171_Y	0.709	0.89
76_S	250_P	0.707	0.89
322_K	432_F	0.707	0.89
124_D	149_E	0.705	0.89
102_G	139_H	0.705	0.89
70_K	73_Q	0.705	0.89
69_I	98_A	0.703	0.89
366_V	390_T	0.701	0.88
110_E	119_E	0.701	0.88
283_S	319_K	0.701	0.88
258_E	261_G	0.700	0.88
19_Y	23_E	0.696	0.88
243_M	311_C	0.695	0.88
146_N	149_E	0.695	0.88
208_R	212_N	0.694	0.88
338_R	341_A	0.691	0.88
205_N	208_R	0.691	0.88
100_F	104_L	0.690	0.88
59_L	89_Q	0.688	0.87
254_V	257_L	0.688	0.87
268_A	416_G	0.688	0.87
456_F	466_E	0.688	0.87
103_K	107_Q	0.686	0.87
196_Y	403_V	0.683	0.87
215_Q	218_R	0.683	0.87
451_K	454_A	0.682	0.87
341_A	345_V	0.682	0.87
295_F	307_I	0.681	0.87
279_V	408_T	0.680	0.87
321_D	347_S	0.680	0.87
446_L	451_K	0.679	0.87
454_A	465_P	0.679	0.87
386_N	389_N	0.677	0.87
266_L	304_P	0.675	0.86
211_A	215_Q	0.674	0.86
220_F	223_S	0.673	0.86
105_A	108_Q	0.672	0.86
108_Q	239_G	0.671	0.86
249_I	261_G	0.668	0.86
12_I	64_L	0.667	0.86
390_T	394_F	0.667	0.86
253_D	257_L	0.665	0.86
405_L	408_T	0.665	0.86
54_G	129_P	0.662	0.85
132_S	135_I	0.661	0.85
440_Q	443_I	0.661	0.85
84_P	87_A	0.660	0.85
199_T	404_L	0.660	0.85
22_D	26_P	0.659	0.85
355_N	362_A	0.656	0.85
355_N	359_F	0.655	0.85
112_A	238_E	0.654	0.85
451_K	455_P	0.652	0.85
445_A	449_A	0.651	0.84
449_A	453_K	0.650	0.84
78_R	156_R	0.649	0.84
173_L	177_V	0.646	0.84
344_H	363_I	0.645	0.84
217_R	221_E	0.645	0.84
449_A	454_A	0.645	0.84
249_I	262_T	0.645	0.84
13_I	16_F	0.645	0.84
51_K	59_L	0.645	0.84
59_L	63_E	0.643	0.84
210_S	213_A	0.642	0.84
342_E	345_V	0.641	0.84
260_N	302_E	0.639	0.83
269_E	428_T	0.638	0.83
213_A	217_R	0.635	0.83
429_A	433_L	0.633	0.83
267_L	270_R	0.633	0.83
163_I	204_L	0.630	0.83
119_E	123_D	0.629	0.82
453_K	461_M	0.629	0.82
100_F	139_H	0.629	0.82
42_F	45_P	0.628	0.82
249_I	263_N	0.626	0.82
456_F	460_K	0.625	0.82
286_H	290_H	0.624	0.82
323_R	445_A	0.624	0.82
39_Y	42_F	0.624	0.82
308_G	311_C	0.622	0.82
97_V	132_S	0.621	0.82
94_Q	252_S	0.621	0.82
286_H	404_L	0.620	0.81
132_S	208_R	0.620	0.81
91_A	94_Q	0.619	0.81
19_Y	22_D	0.619	0.81
54_G	85_H	0.619	0.81
134_S	203_E	0.617	0.81
10_Y	14_R	0.617	0.81
273_Q	431_P	0.617	0.81
80_D	413_E	0.617	0.81
57_L	60_A	0.617	0.81
21_L	25_I	0.617	0.81
258_E	263_N	0.617	0.81
427_K	430_K	0.615	0.81
296_V	308_G	0.615	0.81
79_R	87_A	0.614	0.81
453_K	460_K	0.613	0.81
107_Q	110_E	0.613	0.81
449_A	463_E	0.611	0.81
113_M	237_S	0.609	0.80
170_I	174_A	0.609	0.80
446_L	449_A	0.609	0.80
104_L	158_D	0.609	0.80
460_K	464_L	0.608	0.80
118_V	127_I	0.608	0.80
446_L	450_F	0.607	0.80
453_K	462_P	0.607	0.80
369_P	386_N	0.606	0.80
195_E	198_K	0.605	0.80
203_E	407_K	0.605	0.80
15_T	18_S	0.603	0.80
313_I	407_K	0.602	0.80
113_M	154_V	0.602	0.80
15_T	20_G	0.601	0.79
107_Q	116_L	0.601	0.79
355_N	361_F	0.601	0.79
407_K	436_W	0.601	0.79
19_Y	60_A	0.601	0.79
335_R	368_E	0.600	0.79
248_G	307_I	0.600	0.79
87_A	91_A	0.600	0.79
148_K	234_D	0.599	0.79
416_G	425_L	0.599	0.79
251_V	291_P	0.598	0.79
233_P	242_V	0.597	0.79
404_L	407_K	0.595	0.79
363_I	366_V	0.594	0.79
362_A	366_V	0.594	0.79
100_F	132_S	0.592	0.78
335_R	371_F	0.592	0.78
460_K	466_E	0.591	0.78
10_Y	17_L	0.591	0.78
203_E	289_M	0.590	0.78
460_K	463_E	0.590	0.78
458_V	461_M	0.589	0.78
208_R	211_A	0.586	0.78
68_W	169_L	0.586	0.78
130_L	140_T	0.585	0.78
58_R	143_L	0.584	0.78
236_C	241_M	0.583	0.77
444_P	454_A	0.583	0.77
320_E	324_Y	0.582	0.77
87_A	90_L	0.581	0.77
415_V	418_Q	0.580	0.77
69_I	93_L	0.579	0.77
275_F	424_D	0.579	0.77
114_G	117_P	0.578	0.77
276_F	280_F	0.575	0.76
121_W	144_K	0.575	0.76
71_F	196_Y	0.575	0.76
111_A	161_P	0.574	0.76
7_R	10_Y	0.572	0.76
214_I	236_C	0.572	0.76
213_A	233_P	0.571	0.76
11_F	14_R	0.570	0.76
65_G	156_R	0.569	0.76
122_F	137_Q	0.568	0.76
162_V	177_V	0.567	0.75
271_G	294_I	0.567	0.75
7_R	11_F	0.566	0.75
321_D	324_Y	0.566	0.75
334_N	339_K	0.566	0.75
88_D	107_Q	0.565	0.75
155_I	399_Q	0.565	0.75
250_P	253_D	0.565	0.75
444_P	461_M	0.564	0.75
21_L	24_L	0.563	0.75
378_I	381_G	0.562	0.75
251_V	306_Y	0.562	0.75
68_W	165_A	0.562	0.75
444_P	448_R	0.561	0.75
450_F	457_W	0.560	0.75
65_G	286_H	0.560	0.75
158_D	161_P	0.560	0.75
278_Q	314_V	0.560	0.75
45_P	48_H	0.559	0.74
257_L	260_N	0.559	0.74
170_I	193_V	0.558	0.74
6_V	10_Y	0.558	0.74
344_H	396_M	0.558	0.74
319_K	452_E	0.558	0.74
337_Y	341_A	0.558	0.74
296_V	303_N	0.557	0.74
259_K	262_T	0.557	0.74
96_K	128_K	0.557	0.74
324_Y	347_S	0.557	0.74
461_M	465_P	0.555	0.74
15_T	19_Y	0.554	0.74
191_E	410_L	0.554	0.74
176_W	180_L	0.554	0.74
128_K	256_A	0.554	0.74
27_K	30_I	0.554	0.74
51_K	85_H	0.551	0.73
95_D	252_S	0.550	0.73
341_A	356_V	0.550	0.73
25_I	30_I	0.549	0.73
196_Y	416_G	0.549	0.73
77_T	414_G	0.549	0.73
253_D	262_T	0.548	0.73
194_R	198_K	0.547	0.73
14_R	18_S	0.547	0.73
12_I	19_Y	0.547	0.73
131_A	136_A	0.546	0.73
217_R	228_I	0.546	0.73
248_G	295_F	0.544	0.72
107_Q	125_F	0.543	0.72
318_N	401_Q	0.543	0.72
445_A	452_E	0.542	0.72
445_A	458_V	0.542	0.72
9_L	13_I	0.541	0.72
453_K	457_W	0.540	0.72
289_M	340_V	0.540	0.72
39_Y	44_M	0.539	0.72
141_A	242_V	0.539	0.72
207_L	214_I	0.538	0.72
341_A	350_V	0.538	0.72
205_N	211_A	0.538	0.72
99_P	128_K	0.537	0.71
323_R	440_Q	0.537	0.71
347_S	412_V	0.537	0.71
333_F	433_L	0.535	0.71
326_A	437_I	0.535	0.71
449_A	466_E	0.534	0.71
253_D	259_K	0.534	0.71
271_G	412_V	0.534	0.71
220_F	225_M	0.533	0.71
74_M	196_Y	0.533	0.71
135_I	395_N	0.532	0.71
445_A	448_R	0.532	0.71
452_E	456_F	0.532	0.71
13_I	198_K	0.532	0.71
276_F	432_F	0.531	0.71
337_Y	364_R	0.531	0.71
278_Q	411_Y	0.531	0.71
454_A	462_P	0.531	0.71
199_T	202_D	0.530	0.70
110_E	116_L	0.530	0.70
311_C	407_K	0.529	0.70
25_I	40_S	0.529	0.70
446_L	452_E	0.529	0.70
333_F	430_K	0.528	0.70
26_P	29_R	0.528	0.70
220_F	228_I	0.527	0.70
18_S	22_D	0.527	0.70
172_R	176_W	0.527	0.70
375_L	416_G	0.526	0.70
16_F	60_A	0.525	0.70
6_V	107_Q	0.524	0.70
450_F	460_K	0.524	0.70
136_A	417_R	0.524	0.70
62_Q	98_A	0.524	0.70
426_W	430_K	0.523	0.69
141_A	151_V	0.522	0.69
388_F	392_R	0.522	0.69
24_L	27_K	0.521	0.69
288_D	293_N	0.521	0.69
199_T	313_I	0.520	0.69
445_A	451_K	0.520	0.69
18_S	43_W	0.520	0.69
259_K	263_N	0.519	0.69
8_R	12_I	0.519	0.69
369_P	382_H	0.518	0.69
357_E	360_E	0.518	0.69
66_P	326_A	0.518	0.69
204_L	317_L	0.517	0.69
449_A	462_P	0.517	0.69
274_V	280_F	0.517	0.69
16_F	19_Y	0.517	0.69
61_L	68_W	0.517	0.69
283_S	304_P	0.516	0.68
272_V	416_G	0.516	0.68
77_T	291_P	0.515	0.68
17_L	25_I	0.514	0.68
322_K	391_A	0.514	0.68
171_Y	175_R	0.514	0.68
331_A	336_D	0.513	0.68
417_R	424_D	0.513	0.68
66_P	156_R	0.512	0.68
456_F	461_M	0.512	0.68
146_N	232_Y	0.512	0.68
454_A	461_M	0.512	0.68
136_A	423_L	0.511	0.68
40_S	44_M	0.510	0.68
98_A	101_D	0.510	0.68
70_K	290_H	0.509	0.67
452_E	463_E	0.509	0.67
251_V	385_L	0.509	0.67
135_I	313_I	0.509	0.67
18_S	56_R	0.509	0.67
463_E	466_E	0.508	0.67
359_F	370_I	0.508	0.67
155_I	159_I	0.507	0.67
245_R	295_F	0.507	0.67
76_S	278_Q	0.507	0.67
278_Q	308_G	0.507	0.67
196_Y	419_L	0.506	0.67
433_L	437_I	0.506	0.67
195_E	312_G	0.505	0.67
226_L	316_S	0.505	0.67
230_E	382_H	0.504	0.67
90_L	93_L	0.504	0.67
109_I	119_E	0.503	0.67
272_V	425_L	0.503	0.67
74_M	313_I	0.503	0.67
77_T	94_Q	0.503	0.67
313_I	408_T	0.502	0.66
91_A	291_P	0.502	0.66
164_K	168_K	0.502	0.66
366_V	369_P	0.501	0.66
41_L	46_N	0.501	0.66
18_S	21_L	0.500	0.66
126_E	149_E	0.500	0.66
327_E	356_V	0.500	0.66

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4pedA	1	0.6923	100	0.461	Contact Map
2y7jA	3	0.4524	100	0.737	Contact Map
3byvA	1	0.5989	100	0.738	Contact Map
4yhjA	2	0.7875	100	0.754	Contact Map
3v5wA	1	0.7289	100	0.801	Contact Map
1u5qA	2	0.5366	99.9	0.824	Contact Map
1zarA	1	0.4524	99.9	0.83	Contact Map
4otpA	1	0.4158	99.9	0.849	Contact Map
3dzoA	1	0.5879	99.8	0.859	Contact Map
3fegA	2	0.5366	99.8	0.862	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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