UHPB - ECOLI - GREMLIN Contacts

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UHPB - Sensor protein UhpB

UniProt:	P09835	Sequences: MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQRYV	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG11052
Length:	500 (412)
Sequences:	5836 (5360)
Seq/√Len:	264.1

ECOLI - UHPB BARA TORS RCSC RCSD
BACSU - DESK YDFH YVFT YFIJ COMP YXJM GLNK KINB

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
327_A	347_I	5.086	1.00
276_L	279_L	4.037	1.00
294_A	297_L	3.745	1.00
471_R	475_T	3.711	1.00
450_E	490_R	3.653	1.00
429_A	452_D	3.652	1.00
482_H	492_S	3.540	1.00
444_R	494_S	3.495	1.00
483_I	491_V	3.404	1.00
474_V	479_G	3.206	1.00
451_D	455_G	3.153	1.00
276_L	280_N	3.124	1.00
417_V	474_V	3.072	1.00
448_V	492_S	3.064	1.00
374_T	377_Q	3.064	1.00
470_M	481_L	3.060	1.00
437_Q	448_V	3.059	1.00
417_V	473_R	3.021	1.00
474_V	493_V	2.963	1.00
448_V	490_R	2.833	1.00
446_M	494_S	2.802	1.00
283_L	287_L	2.784	1.00
279_L	283_L	2.690	1.00
396_H	433_A	2.657	1.00
398_E	437_Q	2.651	1.00
331_Q	348_E	2.643	1.00
485_C	489_T	2.613	1.00
447_L	493_V	2.556	1.00
446_M	492_S	2.540	1.00
324_R	351_S	2.517	1.00
287_L	290_N	2.416	1.00
441_Q	446_M	2.368	1.00
451_D	488_G	2.327	1.00
373_L	409_N	2.324	1.00
280_N	283_L	2.323	1.00
425_I	434_V	2.268	1.00
439_W	446_M	2.242	1.00
409_N	477_L	2.225	1.00
330_V	344_G	2.216	1.00
437_Q	450_E	2.213	1.00
293_L	297_L	2.156	1.00
433_A	452_D	2.131	1.00
283_L	286_E	2.124	1.00
323_I	351_S	2.096	1.00
439_W	448_V	2.085	1.00
413_T	416_R	2.069	1.00
396_H	435_T	2.050	1.00
323_I	347_I	2.046	1.00
336_D	340_V	2.025	1.00
484_S	490_R	2.018	1.00
480_T	494_S	2.004	1.00
435_T	450_E	1.983	1.00
315_D	416_R	1.977	1.00
398_E	435_T	1.976	1.00
417_V	470_M	1.973	1.00
331_Q	345_Q	1.906	1.00
429_A	432_S	1.892	1.00
290_N	293_L	1.888	1.00
473_R	477_L	1.881	1.00
418_C	447_L	1.829	1.00
333_L	340_V	1.821	1.00
302_E	306_R	1.789	1.00
280_N	284_Q	1.734	1.00
429_A	434_V	1.711	1.00
286_E	290_N	1.701	1.00
316_I	354_V	1.691	1.00
381_S	415_F	1.673	1.00
371_D	411_R	1.639	1.00
423_N	427_K	1.620	1.00
416_R	419_Q	1.619	1.00
315_D	318_Q	1.600	1.00
315_D	319_T	1.586	1.00
303_S	307_D	1.584	1.00
291_Q	295_E	1.551	1.00
422_L	436_L	1.539	1.00
330_V	340_V	1.537	1.00
96_P	102_R	1.532	1.00
302_E	305_R	1.514	1.00
337_N	340_V	1.514	1.00
432_S	452_D	1.513	1.00
475_T	480_T	1.501	1.00
445_L	497_Q	1.497	1.00
407_S	410_Q	1.496	1.00
394_V	433_A	1.492	1.00
98_A	102_R	1.480	1.00
290_N	294_A	1.449	1.00
280_N	287_L	1.435	1.00
456_L	489_T	1.434	1.00
324_R	352_L	1.432	1.00
305_R	309_A	1.430	1.00
325_T	329_I	1.425	1.00
484_S	492_S	1.407	1.00
360_R	413_T	1.401	1.00
99_L	102_R	1.398	1.00
327_A	344_G	1.394	1.00
315_D	357_A	1.389	1.00
421_G	491_V	1.388	1.00
327_A	351_S	1.379	1.00
421_G	470_M	1.378	1.00
326_Q	343_S	1.368	1.00
388_L	426_V	1.360	1.00
317_G	359_R	1.356	1.00
328_G	348_E	1.349	1.00
413_T	473_R	1.345	1.00
465_F	469_G	1.344	1.00
287_L	291_Q	1.326	1.00
455_G	489_T	1.324	1.00
301_E	305_R	1.319	1.00
97_V	102_R	1.316	1.00
291_Q	294_A	1.296	1.00
481_L	491_V	1.290	1.00
97_V	101_S	1.286	1.00
421_G	493_V	1.272	1.00
451_D	489_T	1.270	1.00
322_A	326_Q	1.268	1.00
474_V	481_L	1.252	1.00
313_H	319_T	1.251	1.00
166_T	169_P	1.249	1.00
254_D	258_S	1.243	1.00
379_I	418_C	1.242	1.00
94_L	100_I	1.236	1.00
164_N	169_P	1.233	1.00
372_D	408_E	1.232	1.00
258_S	262_Q	1.223	1.00
376_E	438_G	1.203	1.00
202_G	206_E	1.196	1.00
289_R	292_H	1.191	1.00
418_C	422_L	1.186	1.00
374_T	405_A	1.182	1.00
436_L	449_I	1.181	1.00
417_V	493_V	1.179	1.00
338_A	341_K	1.176	1.00
165_N	169_P	1.171	1.00
259_L	262_Q	1.168	1.00
269_L	273_I	1.165	1.00
456_L	485_C	1.159	1.00
383_M	397_L	1.157	1.00
376_E	380_R	1.155	1.00
386_M	426_V	1.153	1.00
322_A	350_L	1.149	1.00
416_R	469_G	1.143	1.00
94_L	102_R	1.139	1.00
299_E	302_E	1.137	1.00
355_Y	359_R	1.115	1.00
282_S	285_K	1.115	1.00
94_L	98_A	1.113	1.00
93_T	97_V	1.112	1.00
309_A	318_Q	1.107	1.00
317_G	362_L	1.105	1.00
324_R	328_G	1.104	1.00
276_L	283_L	1.101	1.00
422_L	434_V	1.099	1.00
416_R	473_R	1.099	1.00
294_A	299_E	1.091	1.00
386_M	419_Q	1.090	1.00
453_G	488_G	1.089	1.00
85_L	88_I	1.088	1.00
86_L	93_T	1.084	1.00
404_S	407_S	1.081	1.00
364_R	468_T	1.080	1.00
438_G	447_L	1.062	1.00
281_Q	285_K	1.061	1.00
316_I	357_A	1.060	1.00
97_V	100_I	1.051	1.00
310_R	315_D	1.046	1.00
91_L	102_R	1.044	1.00
482_H	494_S	1.044	1.00
280_N	286_E	1.039	1.00
317_G	354_V	1.034	1.00
329_I	343_S	1.033	1.00
342_Q	346_L	1.028	1.00
93_T	100_I	1.027	1.00
266_G	272_G	1.024	1.00
428_H	460_S	1.023	1.00
326_Q	346_L	1.021	1.00
259_L	270_G	1.021	1.00
483_I	489_T	1.018	1.00
95_L	100_I	1.015	1.00
327_A	348_E	1.010	1.00
405_A	409_N	1.008	1.00
262_Q	269_L	1.007	1.00
93_T	102_R	1.005	1.00
318_Q	322_A	1.003	1.00
456_L	483_I	1.002	1.00
391_R	426_V	1.000	1.00
479_G	495_L	0.999	1.00
349_Q	381_S	0.998	1.00
331_Q	341_K	0.993	1.00
312_L	361_L	0.988	1.00
472_E	475_T	0.986	1.00
440_Q	497_Q	0.986	1.00
366_R	463_Q	0.986	1.00
286_E	289_R	0.978	1.00
279_L	287_L	0.969	1.00
96_P	100_I	0.967	1.00
315_D	321_T	0.964	1.00
382_L	386_M	0.961	1.00
305_R	318_Q	0.961	1.00
288_A	291_Q	0.961	1.00
388_L	395_S	0.960	1.00
89_G	97_V	0.957	1.00
314_D	420_E	0.953	1.00
308_V	313_H	0.951	1.00
309_A	313_H	0.951	1.00
393_I	426_V	0.950	1.00
270_G	273_I	0.950	1.00
423_N	428_H	0.950	1.00
94_L	97_V	0.950	1.00
93_T	96_P	0.948	1.00
289_R	293_L	0.948	1.00
96_P	101_S	0.948	1.00
368_R	413_T	0.947	1.00
261_V	265_T	0.946	1.00
266_G	269_L	0.946	1.00
318_Q	354_V	0.942	1.00
293_L	296_R	0.941	1.00
455_G	485_C	0.941	1.00
383_M	395_S	0.940	1.00
313_H	317_G	0.939	1.00
395_S	436_L	0.939	1.00
354_V	359_R	0.932	1.00
314_D	317_G	0.931	1.00
270_G	274_Q	0.930	1.00
351_S	355_Y	0.928	1.00
375_L	445_L	0.923	1.00
276_L	282_S	0.922	1.00
279_L	282_S	0.921	1.00
393_I	397_L	0.918	1.00
380_R	384_R	0.916	1.00
420_E	470_M	0.914	1.00
362_L	366_R	0.913	1.00
454_S	489_T	0.913	1.00
300_T	303_S	0.912	1.00
85_L	89_G	0.910	1.00
382_L	422_L	0.910	1.00
393_I	429_A	0.908	1.00
379_I	438_G	0.908	1.00
265_T	268_L	0.907	1.00
320_I	358_V	0.904	1.00
215_L	218_P	0.900	1.00
202_G	205_D	0.898	1.00
305_R	308_V	0.896	1.00
267_L	271_A	0.896	1.00
345_Q	349_Q	0.895	1.00
302_E	416_R	0.895	1.00
455_G	488_G	0.893	1.00
399_W	438_G	0.891	1.00
89_G	98_A	0.887	1.00
86_L	89_G	0.885	1.00
324_R	348_E	0.881	1.00
271_A	274_Q	0.881	1.00
318_Q	325_T	0.880	1.00
327_A	331_Q	0.880	1.00
279_L	286_E	0.876	1.00
89_G	102_R	0.876	1.00
425_I	429_A	0.875	1.00
245_S	248_W	0.874	1.00
321_T	350_L	0.874	1.00
406_L	409_N	0.874	1.00
305_R	321_T	0.873	1.00
388_L	391_R	0.872	1.00
233_I	237_M	0.859	1.00
262_Q	270_G	0.859	1.00
316_I	361_L	0.859	1.00
313_H	318_Q	0.858	1.00
309_A	428_H	0.857	1.00
279_L	284_Q	0.856	1.00
203_L	206_E	0.855	1.00
296_R	300_T	0.852	1.00
422_L	426_V	0.852	1.00
388_L	434_V	0.851	1.00
441_Q	494_S	0.850	1.00
281_Q	284_Q	0.849	1.00
378_A	381_S	0.846	1.00
288_A	292_H	0.846	1.00
305_R	427_K	0.846	1.00
305_R	313_H	0.839	0.99
95_L	102_R	0.838	0.99
234_A	238_N	0.837	0.99
253_V	258_S	0.837	0.99
269_L	272_G	0.832	0.99
96_P	99_L	0.830	0.99
313_H	420_E	0.829	0.99
325_T	350_L	0.827	0.99
311_E	317_G	0.826	0.99
315_D	420_E	0.826	0.99
93_T	98_A	0.824	0.99
479_G	496_P	0.824	0.99
261_V	270_G	0.819	0.99
470_M	473_R	0.818	0.99
111_T	114_L	0.814	0.99
382_L	419_Q	0.814	0.99
319_T	469_G	0.813	0.99
267_L	270_G	0.812	0.99
95_L	99_L	0.809	0.99
98_A	101_S	0.808	0.99
383_M	422_L	0.802	0.99
167_W	171_G	0.801	0.99
90_S	93_T	0.800	0.99
262_Q	266_G	0.798	0.99
417_V	477_L	0.795	0.99
469_G	473_R	0.795	0.99
278_E	281_Q	0.794	0.99
326_Q	350_L	0.793	0.99
197_L	200_Q	0.790	0.99
350_L	353_G	0.789	0.99
406_L	410_Q	0.787	0.99
89_G	101_S	0.785	0.99
258_S	271_A	0.782	0.99
324_R	355_Y	0.782	0.99
368_R	477_L	0.782	0.99
108_D	111_T	0.780	0.99
474_V	495_L	0.779	0.99
446_M	482_H	0.779	0.99
305_R	428_H	0.775	0.99
266_G	270_G	0.774	0.99
282_S	287_L	0.773	0.99
413_T	469_G	0.773	0.99
185_H	188_W	0.772	0.99
91_L	94_L	0.770	0.99
375_L	447_L	0.769	0.99
308_V	312_L	0.768	0.99
409_N	479_G	0.767	0.99
156_L	160_H	0.766	0.99
83_F	86_L	0.766	0.99
379_I	436_L	0.765	0.99
265_T	269_L	0.764	0.99
410_Q	413_T	0.764	0.99
168_L	172_P	0.759	0.99
316_I	358_V	0.758	0.99
368_R	410_Q	0.756	0.99
415_F	419_Q	0.747	0.99
454_S	485_C	0.747	0.99
163_A	166_T	0.742	0.99
421_G	449_I	0.742	0.99
258_S	270_G	0.741	0.99
315_D	469_G	0.739	0.99
303_S	306_R	0.739	0.99
315_D	419_Q	0.739	0.99
311_E	315_D	0.738	0.99
382_L	385_E	0.738	0.99
356_D	412_V	0.738	0.99
231_A	234_A	0.736	0.99
230_G	234_A	0.736	0.99
315_D	470_M	0.735	0.99
232_L	236_L	0.732	0.99
265_T	273_I	0.731	0.99
234_A	237_M	0.725	0.98
361_L	365_L	0.725	0.98
284_Q	288_A	0.724	0.98
420_E	469_G	0.724	0.98
383_M	387_E	0.723	0.98
292_H	296_R	0.722	0.98
438_G	445_L	0.720	0.98
152_A	160_H	0.719	0.98
310_R	316_I	0.718	0.98
282_S	286_E	0.718	0.98
300_T	304_V	0.717	0.98
89_G	92_L	0.716	0.98
167_W	170_L	0.716	0.98
286_E	291_Q	0.715	0.98
400_R	404_S	0.714	0.98
341_K	345_Q	0.714	0.98
436_L	447_L	0.714	0.98
378_A	415_F	0.714	0.98
117_A	120_T	0.713	0.98
253_V	257_L	0.708	0.98
155_C	159_W	0.708	0.98
94_L	101_S	0.704	0.98
268_L	271_A	0.704	0.98
358_V	416_R	0.703	0.98
362_L	463_Q	0.702	0.98
116_G	124_L	0.702	0.98
482_H	493_V	0.701	0.98
169_P	172_P	0.701	0.98
308_V	311_E	0.701	0.98
360_R	416_R	0.700	0.98
385_E	419_Q	0.698	0.98
444_R	480_T	0.695	0.98
376_E	399_W	0.695	0.98
311_E	318_Q	0.695	0.98
257_L	269_L	0.692	0.98
88_I	93_T	0.690	0.98
89_G	96_P	0.689	0.98
263_S	267_L	0.684	0.98
162_L	166_T	0.684	0.98
260_L	264_L	0.682	0.98
84_P	88_I	0.682	0.98
458_P	486_L	0.681	0.98
405_A	408_E	0.680	0.98
456_L	467_L	0.680	0.98
309_A	473_R	0.680	0.98
317_G	321_T	0.679	0.98
420_E	465_F	0.678	0.98
304_V	307_D	0.678	0.98
327_A	330_V	0.676	0.98
362_L	365_L	0.674	0.98
315_D	350_L	0.674	0.98
370_L	408_E	0.673	0.98
354_V	357_A	0.671	0.97
416_R	477_L	0.670	0.97
318_Q	463_Q	0.670	0.97
86_L	90_S	0.669	0.97
380_R	383_M	0.668	0.97
179_I	182_R	0.668	0.97
348_E	352_L	0.667	0.97
315_D	353_G	0.667	0.97
435_T	452_D	0.666	0.97
314_D	318_Q	0.666	0.97
353_G	357_A	0.665	0.97
312_L	324_R	0.664	0.97
292_H	295_E	0.663	0.97
154_I	160_H	0.662	0.97
184_R	187_V	0.661	0.97
277_R	281_Q	0.660	0.97
377_Q	411_R	0.658	0.97
270_G	275_R	0.657	0.97
485_C	492_S	0.657	0.97
204_P	208_S	0.656	0.97
191_L	194_V	0.656	0.97
91_L	101_S	0.656	0.97
301_E	427_K	0.656	0.97
311_E	360_R	0.653	0.97
340_V	344_G	0.651	0.97
315_D	361_L	0.649	0.97
299_E	303_S	0.648	0.97
261_V	266_G	0.648	0.97
346_L	350_L	0.647	0.97
321_T	324_R	0.646	0.97
278_E	282_S	0.645	0.97
374_T	378_A	0.645	0.97
413_T	477_L	0.644	0.97
205_D	208_S	0.644	0.97
311_E	416_R	0.642	0.97
317_G	355_Y	0.641	0.97
305_R	429_A	0.637	0.97
323_I	327_A	0.635	0.96
89_G	93_T	0.635	0.96
84_P	101_S	0.634	0.96
163_A	169_P	0.634	0.96
420_E	463_Q	0.632	0.96
88_I	91_L	0.631	0.96
373_L	411_R	0.630	0.96
301_E	306_R	0.629	0.96
384_R	387_E	0.629	0.96
301_E	318_Q	0.629	0.96
272_G	275_R	0.628	0.96
137_S	140_A	0.628	0.96
84_P	97_V	0.626	0.96
342_Q	345_Q	0.624	0.96
321_T	326_Q	0.623	0.96
393_I	452_D	0.623	0.96
92_L	96_P	0.622	0.96
91_L	96_P	0.622	0.96
95_L	101_S	0.622	0.96
251_H	254_D	0.621	0.96
271_A	275_R	0.620	0.96
382_L	415_F	0.619	0.96
276_L	287_L	0.619	0.96
364_R	472_E	0.619	0.96
256_L	265_T	0.618	0.96
95_L	98_A	0.617	0.96
418_C	449_I	0.615	0.96
277_R	280_N	0.612	0.96
88_I	92_L	0.610	0.96
239_A	243_I	0.610	0.96
318_Q	419_Q	0.609	0.96
263_S	270_G	0.608	0.95
314_D	473_R	0.608	0.95
420_E	423_N	0.605	0.95
321_T	325_T	0.605	0.95
91_L	97_V	0.605	0.95
318_Q	355_Y	0.605	0.95
138_W	141_L	0.604	0.95
287_L	294_A	0.603	0.95
414_L	418_C	0.603	0.95
258_S	275_R	0.602	0.95
317_G	427_K	0.602	0.95
370_L	409_N	0.600	0.95
307_D	472_E	0.600	0.95
305_R	311_E	0.600	0.95
319_T	360_R	0.596	0.95
317_G	360_R	0.593	0.95
254_D	257_L	0.591	0.95
305_R	315_D	0.590	0.95
237_M	241_A	0.590	0.95
90_S	95_L	0.590	0.95
118_A	121_A	0.587	0.95
414_L	495_L	0.586	0.95
470_M	493_V	0.586	0.95
424_N	466_G	0.583	0.94
308_V	427_K	0.583	0.94
139_N	142_L	0.583	0.94
357_A	365_L	0.582	0.94
318_Q	423_N	0.582	0.94
200_Q	204_P	0.581	0.94
305_R	317_G	0.581	0.94
336_D	339_S	0.580	0.94
266_G	275_R	0.580	0.94
85_L	93_T	0.580	0.94
311_E	428_H	0.579	0.94
88_I	96_P	0.578	0.94
307_D	311_E	0.578	0.94
112_L	115_Q	0.578	0.94
424_N	451_D	0.576	0.94
109_W	113_L	0.576	0.94
322_A	346_L	0.576	0.94
254_D	266_G	0.576	0.94
94_L	99_L	0.574	0.94
213_F	221_A	0.574	0.94
318_Q	362_L	0.573	0.94
266_G	273_I	0.573	0.94
286_E	294_A	0.572	0.94
166_T	172_P	0.571	0.94
84_P	95_L	0.570	0.94
367_P	370_L	0.570	0.94
90_S	98_A	0.569	0.94
138_W	157_V	0.568	0.94
163_A	168_L	0.567	0.93
409_N	414_L	0.566	0.93
286_E	293_L	0.564	0.93
314_D	421_G	0.564	0.93
354_V	362_L	0.564	0.93
169_P	174_L	0.563	0.93
358_V	364_R	0.562	0.93
367_P	415_F	0.562	0.93
347_I	351_S	0.562	0.93
213_F	220_I	0.561	0.93
114_L	118_A	0.561	0.93
204_P	207_L	0.557	0.93
84_P	94_L	0.557	0.93
163_A	167_W	0.557	0.93
309_A	427_K	0.557	0.93
424_N	464_G	0.556	0.93
451_D	485_C	0.556	0.93
350_L	354_V	0.555	0.93
129_P	133_H	0.553	0.93
92_L	98_A	0.551	0.93
331_Q	344_G	0.551	0.93
301_E	304_V	0.551	0.93
379_I	397_L	0.550	0.92
88_I	98_A	0.549	0.92
269_L	275_R	0.549	0.92
404_S	440_Q	0.548	0.92
195_I	199_L	0.548	0.92
91_L	98_A	0.548	0.92
171_G	175_V	0.548	0.92
385_E	415_F	0.547	0.92
141_L	147_G	0.546	0.92
334_A	341_K	0.545	0.92
268_L	272_G	0.544	0.92
430_D	454_S	0.543	0.92
431_A	452_D	0.543	0.92
109_W	112_L	0.543	0.92
140_A	144_T	0.542	0.92
354_V	365_L	0.542	0.92
356_D	360_R	0.542	0.92
173_S	178_P	0.541	0.92
127_S	130_W	0.540	0.92
164_N	168_L	0.540	0.92
411_R	415_F	0.540	0.92
320_I	354_V	0.539	0.92
92_L	95_L	0.538	0.92
312_L	362_L	0.538	0.92
230_G	233_I	0.537	0.92
103_Y	106_Q	0.537	0.92
168_L	175_V	0.536	0.91
202_G	208_S	0.535	0.91
254_D	270_G	0.535	0.91
108_D	112_L	0.535	0.91
379_I	382_L	0.534	0.91
359_R	362_L	0.533	0.91
141_L	146_T	0.533	0.91
315_D	413_T	0.533	0.91
234_A	242_L	0.532	0.91
374_T	402_D	0.532	0.91
203_L	208_S	0.530	0.91
234_A	240_I	0.529	0.91
263_S	269_L	0.528	0.91
268_L	274_Q	0.527	0.91
122_A	125_L	0.527	0.91
90_S	102_R	0.526	0.91
141_L	144_T	0.526	0.91
255_L	259_L	0.525	0.91
357_A	362_L	0.525	0.91
92_L	100_I	0.523	0.90
128_L	132_W	0.520	0.90
85_L	100_I	0.520	0.90
169_P	173_S	0.520	0.90
314_D	462_Q	0.520	0.90
165_N	168_L	0.519	0.90
313_H	365_L	0.515	0.90
256_L	260_L	0.514	0.90
357_A	364_R	0.513	0.90
311_E	468_T	0.513	0.90
308_V	362_L	0.512	0.90
380_R	397_L	0.512	0.90
456_L	491_V	0.510	0.89
186_L	191_L	0.510	0.89
453_G	489_T	0.510	0.89
87_M	91_L	0.509	0.89
311_E	322_A	0.508	0.89
319_T	358_V	0.508	0.89
309_A	321_T	0.508	0.89
330_V	347_I	0.507	0.89
167_W	172_P	0.507	0.89
223_A	226_Y	0.507	0.89
362_L	427_K	0.507	0.89
146_T	157_V	0.507	0.89
393_I	431_A	0.506	0.89
468_T	472_E	0.506	0.89
102_R	106_Q	0.506	0.89
306_R	326_Q	0.504	0.89
227_G	232_L	0.504	0.89
453_G	485_C	0.503	0.89
264_L	272_G	0.501	0.89
321_T	429_A	0.500	0.88
267_L	275_R	0.500	0.88

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4i5sA	2	0.526	100	0.555	Contact Map
4r39A	1	0.394	100	0.56	Contact Map
3ehhA	2	0.386	100	0.564	Contact Map
4q20A	2	0.414	100	0.568	Contact Map
3d36A	2	0.404	100	0.579	Contact Map
4bixA	2	0.416	100	0.579	Contact Map
2c2aA	2	0.424	100	0.584	Contact Map
4ctiA	2	0.448	100	0.59	Contact Map
2q8gA	2	0.498	100	0.591	Contact Map
3jz3A	2	0.302	100	0.591	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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