GREMLIN Database
ARAB - Ribulokinase
UniProt: P08204 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
EcoGene: EG10053
Length: 566 (479)
Sequences: 11865 (8046)
Seq/√Len: 367.6

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
220_A236_S4.3571.00
127_E165_R3.9141.00
20_D25_E3.6341.00
16_A64_A3.3301.00
130_E165_R3.2661.00
20_D23_T3.1921.00
439_R536_Y2.9401.00
479_P523_Q2.9271.00
211_H214_W2.8701.00
146_Y219_P2.8621.00
102_L170_V2.8541.00
439_R443_E2.8151.00
506_D509_S2.7721.00
470_Q474_D2.7511.00
414_I426_L2.7461.00
446_T478_R2.7461.00
32_E63_A2.7271.00
32_E67_T2.7251.00
210_W242_T2.6721.00
37_W115_M2.6701.00
505_A509_S2.6261.00
30_S67_T2.6211.00
466_Q520_K2.6201.00
454_N481_Q2.6131.00
96_D173_S2.5411.00
244_T247_I2.5041.00
18_A68_V2.5021.00
216_G236_S2.4711.00
55_R187_L2.4621.00
58_I187_L2.3921.00
211_H219_P2.3801.00
439_R533_E2.3701.00
223_F236_S2.3581.00
114_A167_D2.3281.00
97_A175_A2.3271.00
385_N425_L2.2961.00
185_P271_G2.2411.00
75_E78_A2.2221.00
191_T241_D2.2221.00
220_A224_D2.1921.00
272_A277_M2.1261.00
390_H425_L2.1211.00
13_S31_V2.0941.00
7_L61_M2.0891.00
341_I430_L2.0801.00
130_E134_L2.0541.00
55_R100_N2.0441.00
17_L490_A2.0131.00
394_V414_I2.0071.00
525_C528_Q1.9741.00
67_T71_E1.9681.00
297_T338_F1.9651.00
46_P49_Q1.9521.00
393_V538_R1.9511.00
253_C256_W1.9411.00
142_D145_R1.9361.00
477_N529_A1.9251.00
35_P56_D1.8871.00
4_A498_A1.8751.00
446_T451_A1.8571.00
161_L165_R1.8441.00
5_I65_L1.8431.00
189_S268_I1.8351.00
9_F14_V1.8341.00
474_D525_C1.8161.00
536_Y540_Q1.8031.00
254_P264_E1.7921.00
457_A469_M1.7871.00
176_S192_T1.7801.00
481_Q521_T1.7801.00
5_I16_A1.7611.00
3_I27_I1.7531.00
269_S500_A1.7521.00
93_A181_C1.7411.00
146_Y221_S1.7401.00
422_D425_L1.7291.00
198_R243_W1.7211.00
142_D146_Y1.7051.00
345_F430_L1.7021.00
94_P163_V1.6901.00
99_G186_A1.6871.00
474_D528_Q1.6561.00
129_E133_R1.6521.00
479_P521_T1.6491.00
248_P251_T1.6401.00
243_W247_I1.6391.00
436_F535_L1.6321.00
142_D221_S1.6291.00
132_T140_N1.6191.00
374_L377_A1.6001.00
96_D100_N1.5921.00
94_P238_L1.5681.00
288_A454_N1.5561.00
443_E540_Q1.5411.00
126_E130_E1.5401.00
3_I18_A1.5341.00
529_A533_E1.5331.00
248_P269_S1.5321.00
4_A503_V1.5291.00
541_Q545_S1.5251.00
380_E384_K1.5241.00
343_A347_R1.5121.00
411_K418_N1.5061.00
443_E446_T1.5011.00
527_E530_Q1.5011.00
37_W56_D1.4971.00
382_W385_N1.4821.00
53_H56_D1.4611.00
141_V145_R1.4571.00
467_V471_A1.4441.00
286_P304_D1.4431.00
82_G497_A1.4401.00
189_S250_G1.4401.00
30_S68_V1.4381.00
377_A380_E1.4351.00
263_P266_V1.4331.00
484_A519_E1.4301.00
30_S64_A1.4141.00
169_A172_Q1.3961.00
185_P249_V1.3921.00
55_R59_E1.3891.00
251_T265_S1.3791.00
466_Q482_I1.3781.00
498_A504_H1.3731.00
428_G432_A1.3701.00
466_Q522_L1.3651.00
381_A384_K1.3651.00
28_A71_E1.3541.00
28_A68_V1.3521.00
97_A177_W1.3521.00
353_L377_A1.3391.00
68_V72_L1.3371.00
293_I472_C1.3361.00
185_P198_R1.3351.00
183_W187_L1.3341.00
394_V398_F1.3321.00
125_V129_E1.3231.00
394_V430_L1.3111.00
243_W249_V1.3081.00
75_E79_A1.3011.00
435_A475_V1.2981.00
7_L65_L1.2931.00
14_V61_M1.2921.00
235_P238_L1.2911.00
162_H166_Q1.2901.00
22_A503_V1.2881.00
335_Q437_G1.2821.00
142_D225_E1.2721.00
89_G273_F1.2701.00
58_I62_E1.2661.00
454_N479_P1.2651.00
482_I522_L1.2641.00
289_L452_V1.2591.00
435_A471_A1.2571.00
378_L427_F1.2501.00
127_E161_L1.2391.00
18_A74_V1.2361.00
223_F239_F1.2351.00
14_V60_S1.2321.00
464_K486_D1.2301.00
287_N453_N1.2281.00
291_K472_C1.2271.00
435_A472_C1.2241.00
377_A381_A1.2241.00
471_A475_V1.2121.00
469_M522_L1.2111.00
384_K424_P1.2111.00
191_T198_R1.2071.00
382_W467_V1.2021.00
91_T116_F1.2001.00
443_E536_Y1.1991.00
530_Q534_Q1.1931.00
272_A496_F1.1881.00
285_Q511_Q1.1861.00
157_W226_L1.1841.00
128_A151_Y1.1781.00
413_V546_A1.1721.00
375_L378_L1.1681.00
164_T171_A1.1661.00
201_R215_G1.1621.00
69_L76_Q1.1601.00
381_A424_P1.1571.00
440_A540_Q1.1571.00
143_Y151_Y1.1531.00
19_V26_E1.1521.00
61_M184_V1.1411.00
392_P421_T1.1371.00
7_L16_A1.1361.00
385_N424_P1.1351.00
477_N533_E1.1321.00
337_A341_I1.1321.00
134_L225_E1.1291.00
59_E63_A1.1291.00
528_Q531_R1.1271.00
417_L421_T1.1261.00
248_P267_V1.1191.00
341_I394_V1.1181.00
51_R115_M1.1171.00
63_A67_T1.1171.00
221_S224_D1.1171.00
169_A173_S1.1151.00
248_P500_A1.1091.00
439_R476_L1.1061.00
285_Q288_A1.1061.00
349_L426_L1.1051.00
201_R242_T1.1031.00
312_A316_I1.1031.00
3_I74_V1.1021.00
28_A72_L1.0901.00
54_P93_A1.0861.00
415_T542_W1.0851.00
442_M476_L1.0831.00
171_A174_A1.0811.00
167_D170_V1.0771.00
288_A456_M1.0741.00
82_G501_A1.0741.00
533_E537_R1.0691.00
126_E129_E1.0671.00
34_Y60_S1.0661.00
18_A72_L1.0641.00
381_A423_A1.0631.00
30_S71_E1.0591.00
3_I79_A1.0581.00
95_I178_I1.0561.00
36_R52_H1.0501.00
434_T461_I1.0501.00
285_Q508_P1.0481.00
53_H115_M1.0411.00
174_A238_L1.0391.00
305_K326_P1.0341.00
50_F120_K1.0311.00
94_P174_A1.0291.00
337_A340_D1.0281.00
379_T465_N1.0251.00
210_W214_W1.0231.00
4_A501_A1.0231.00
456_M481_Q1.0231.00
127_E166_Q1.0221.00
421_T425_L1.0221.00
19_V494_A1.0211.00
99_G192_T1.0191.00
85_V185_P1.0191.00
380_E383_A1.0151.00
198_R249_V1.0151.00
67_T70_A1.0151.00
201_R210_W1.0141.00
182_D199_R1.0121.00
499_V510_A1.0101.00
127_E130_E1.0051.00
412_G417_L1.0011.00
61_M65_L1.0011.00
538_R541_Q0.9961.00
379_T383_A0.9901.00
94_P160_I0.9881.00
518_V521_T0.9871.00
484_A515_A0.9861.00
56_D59_E0.9861.00
129_E132_T0.9811.00
285_Q512_Q0.9811.00
509_S512_Q0.9811.00
525_C529_A0.9751.00
82_G269_S0.9721.00
504_H510_A0.9711.00
289_L301_L0.9701.00
170_V173_S0.9661.00
376_P379_T0.9651.00
436_F475_V0.9641.00
428_G467_V0.9591.00
201_R323_S0.9571.00
69_L80_V0.9571.00
62_E66_K0.9571.00
74_V79_A0.9551.00
495_I510_A0.9551.00
16_A68_V0.9521.00
143_Y208_S0.9521.00
223_F234_L0.9491.00
157_W208_S0.9451.00
179_E182_D0.9441.00
269_S501_A0.9411.00
436_F536_Y0.9401.00
461_I468_I0.9401.00
69_L72_L0.9391.00
81_V501_A0.9341.00
66_K70_A0.9341.00
439_R475_V0.9321.00
394_V429_G0.9281.00
100_N187_L0.9271.00
454_N521_T0.9201.00
498_A503_V0.9141.00
477_N531_R0.9081.00
163_V170_V0.9031.00
251_T267_V0.9011.00
130_E133_R0.8941.00
417_L426_L0.8911.00
285_Q453_N0.8901.00
20_D27_I0.8891.00
83_I266_V0.8891.00
215_G244_T0.8891.00
130_E161_L0.8881.00
476_L479_P0.8871.00
32_E64_A0.8871.00
84_G269_S0.8851.00
39_K47_N0.8841.00
145_R311_R0.8841.00
299_D442_M0.8821.00
198_R241_D0.8711.00
136_H225_E0.8691.00
168_S172_Q0.8681.00
5_I18_A0.8671.00
86_D489_C0.8651.00
256_W260_L0.8641.00
495_I514_M0.8601.00
290_V458_L0.8591.00
92_P178_I0.8571.00
18_A80_V0.8561.00
145_R213_S0.8551.00
323_S327_G0.8531.00
526_S529_A0.8531.00
175_A237_P0.8471.00
252_L262_L0.8471.00
443_E447_D0.8461.00
202_C322_G0.8451.00
179_E207_K0.8431.00
9_F184_V0.8421.00
122_H152_S0.8421.00
157_W209_L0.8401.00
289_L455_V0.8391.00
382_W386_P0.8381.00
470_Q525_C0.8361.00
199_R204_A0.8361.00
90_S206_H0.8331.00
391_L535_L0.8301.00
407_N410_L0.8261.00
382_W427_F0.8231.00
297_T438_A0.8221.00
415_T546_A0.8191.00
216_G241_D0.8171.00
5_I80_V0.8121.00
57_Y180_L0.8101.00
414_I430_L0.8101.00
96_D102_L0.8101.00
302_I328_F0.8091.00
128_A158_A0.8071.00
114_A163_V0.8051.00
278_G458_L0.8041.00
455_V476_L0.8041.00
431_I471_A0.8021.00
251_T264_E0.8001.00
393_V415_T0.8001.00
161_L227_D0.7991.00
462_A486_D0.7991.00
526_S531_R0.7991.00
304_D328_F0.7981.00
102_L173_S0.7981.00
254_P265_S0.7981.00
19_V491_L0.7981.00
128_A153_S0.7971.00
216_G220_A0.7971.00
33_W343_A0.7961.00
190_G253_C0.7951.00
161_L164_T0.7941.00
526_S530_Q0.7931.00
499_V507_I0.7911.00
350_G423_A0.7911.00
210_W215_G0.7911.00
123_T162_H0.7901.00
94_P177_W0.7861.00
353_L423_A0.7831.00
344_W347_R0.7801.00
388_L391_L0.7801.00
204_A218_P0.7791.00
252_L260_L0.7781.00
481_Q518_V0.7781.00
78_A263_P0.7761.00
132_T151_Y0.7761.00
199_R240_T0.7741.00
160_I209_L0.7721.00
89_G332_E0.7721.00
541_Q544_M0.7711.00
65_L69_L0.7701.00
178_I192_T0.7691.00
243_W270_G0.7691.00
54_P115_M0.7681.00
510_A514_M0.7681.00
126_E166_Q0.7671.00
136_H142_D0.7661.00
201_R244_T0.7651.00
275_C298_C0.7631.00
80_V266_V0.7631.00
186_A192_T0.7621.00
33_W346_G0.7621.00
178_I182_D0.7621.00
298_C334_G0.7601.00
89_G203_S0.7581.00
177_W238_L0.7581.00
342_Y379_T0.7571.00
345_F427_F0.7561.00
19_V485_S0.7551.00
146_Y211_H0.7551.00
23_T513_K0.7541.00
9_F61_M0.7511.00
81_V503_V0.7511.00
4_A82_G0.7491.00
442_M446_T0.7481.00
62_E256_W0.7481.00
376_P380_E0.7461.00
466_Q470_Q0.7441.00
435_A468_I0.7431.00
95_I99_G0.7431.00
85_V188_L0.7411.00
129_E409_R0.7391.00
410_L413_V0.7381.00
470_Q522_L0.7361.00
439_R540_Q0.7341.00
34_Y52_H0.7321.00
431_I465_N0.7301.00
282_A458_L0.7301.00
32_E60_S0.7281.00
56_D60_S0.7281.00
333_A441_I0.7271.00
465_N468_I0.7271.00
530_Q535_L0.7271.00
457_A472_C0.7231.00
457_A482_I0.7211.00
535_L538_R0.7211.00
440_A536_Y0.7211.00
85_V184_V0.7211.00
534_Q537_R0.7171.00
221_S225_E0.7171.00
291_K438_A0.7161.00
215_G323_S0.7161.00
534_Q538_R0.7151.00
6_G84_G0.7140.99
119_W296_S0.7130.99
401_R404_P0.7120.99
226_L234_L0.7110.99
312_A317_C0.7100.99
462_A469_M0.7090.99
291_K297_T0.7080.99
353_L374_L0.7060.99
252_L266_V0.7060.99
457_A480_L0.7060.99
346_G375_L0.7050.99
338_F434_T0.7050.99
301_L445_F0.7030.99
95_I183_W0.6990.99
199_R242_T0.6980.99
219_P222_F0.6980.99
379_T466_Q0.6960.99
126_E165_R0.6960.99
278_G489_C0.6940.99
381_A385_N0.6910.99
173_S176_S0.6910.99
224_D236_S0.6910.99
282_A290_V0.6890.99
55_R183_W0.6890.99
509_S513_K0.6860.99
11_S118_L0.6850.99
39_K49_Q0.6820.99
9_F60_S0.6810.99
172_Q176_S0.6810.99
528_Q533_E0.6800.99
211_H216_G0.6800.99
14_V34_Y0.6790.99
143_Y222_F0.6790.99
83_I252_L0.6790.99
114_A170_V0.6790.99
383_A467_V0.6780.99
262_L265_S0.6760.99
345_F349_L0.6760.99
161_L171_A0.6740.99
99_G175_A0.6740.99
498_A502_K0.6740.99
61_M64_A0.6710.99
540_Q544_M0.6700.99
453_N478_R0.6680.99
508_P511_Q0.6680.99
39_K46_P0.6670.99
479_P524_P0.6660.99
389_D393_V0.6660.99
59_E62_E0.6640.99
181_C203_S0.6620.99
55_R101_V0.6590.99
96_D175_A0.6590.99
248_P501_A0.6590.99
345_F426_L0.6580.99
314_K447_D0.6570.99
94_P102_L0.6570.99
264_E267_V0.6560.99
62_E187_L0.6560.99
4_A81_V0.6540.99
58_I256_W0.6530.99
97_A173_S0.6520.99
147_I222_F0.6520.99
244_T323_S0.6520.99
391_L428_G0.6490.99
495_I513_K0.6480.99
185_P189_S0.6470.99
447_D540_Q0.6470.99
252_L263_P0.6460.99
51_R123_T0.6460.99
245_A271_G0.6450.99
499_V506_D0.6440.99
511_Q515_A0.6430.99
87_S180_L0.6420.99
69_L74_V0.6420.99
397_W401_R0.6400.99
101_V115_M0.6370.99
504_H513_K0.6360.99
192_T253_C0.6350.99
390_H421_T0.6340.99
284_A288_A0.6340.99
215_G327_G0.6340.99
455_V480_L0.6330.99
383_A386_P0.6320.99
227_D235_P0.6320.99
213_S311_R0.6310.99
249_V270_G0.6310.99
93_A116_F0.6300.99
410_L414_I0.6290.99
385_N390_H0.6280.99
533_E536_Y0.6280.99
29_T487_Q0.6250.99
29_T71_E0.6250.99
160_I238_L0.6240.99
234_L239_F0.6230.99
91_T118_L0.6230.99
283_G511_Q0.6220.99
385_N389_D0.6220.99
379_T382_W0.6210.99
22_A81_V0.6180.99
149_G155_W0.6170.99
510_A513_K0.6170.99
256_W265_S0.6160.99
395_L413_V0.6150.99
389_D425_L0.6120.98
65_L68_V0.6120.98
291_K455_V0.6100.98
343_A375_L0.6090.98
387_S428_G0.6080.98
387_S531_R0.6070.98
26_E29_T0.6060.98
88_T119_W0.6060.98
117_V123_T0.6040.98
455_V478_R0.6040.98
482_I519_E0.6040.98
499_V504_H0.6040.98
131_I226_L0.6020.98
432_A471_A0.6020.98
382_W424_P0.6020.98
83_I268_I0.6010.98
284_A290_V0.6010.98
262_L266_V0.6000.98
87_S203_S0.5990.98
241_D247_I0.5990.98
381_A427_F0.5990.98
62_E260_L0.5980.98
386_P390_H0.5970.98
518_V524_P0.5970.98
411_K414_I0.5960.98
274_D295_T0.5960.98
95_I176_S0.5950.98
335_Q441_I0.5950.98
19_V490_A0.5940.98
514_M518_V0.5920.98
288_A511_Q0.5910.98
378_L382_W0.5910.98
348_V422_D0.5910.98
82_G267_V0.5910.98
388_L425_L0.5910.98
95_I186_A0.5900.98
530_Q533_E0.5890.98
136_H141_V0.5890.98
92_P156_F0.5880.98
386_P389_D0.5880.98
315_G332_E0.5870.98
395_L401_R0.5850.98
209_L239_F0.5850.98
183_W186_A0.5840.98
511_Q514_M0.5840.98
50_F118_L0.5830.98
428_G471_A0.5830.98
523_Q526_S0.5830.98
390_H420_A0.5820.98
386_P425_L0.5810.98
273_F276_H0.5800.98
499_V502_K0.5800.98
65_L260_L0.5800.98
388_L428_G0.5800.98
394_V433_A0.5790.98
171_A227_D0.5790.98
161_L226_L0.5790.98
73_S76_Q0.5790.98
507_I511_Q0.5780.98
531_R535_L0.5780.98
281_G488_C0.5770.98
391_L425_L0.5770.98
141_V144_S0.5760.98
143_Y226_L0.5760.98
63_A66_K0.5740.98
477_N526_S0.5740.98
251_T254_P0.5730.98
444_C447_D0.5720.98
293_I457_A0.5720.98
297_T472_C0.5710.98
49_Q123_T0.5710.98
202_C272_A0.5710.98
405_N440_A0.5700.98
508_P512_Q0.5700.98
135_C222_F0.5680.98
283_G514_M0.5670.97
4_A504_H0.5660.97
405_N540_Q0.5650.97
454_N478_R0.5640.97
300_I330_G0.5630.97
303_A331_L0.5630.97
174_A177_W0.5600.97
351_W423_A0.5590.97
38_Q50_F0.5560.97
39_K115_M0.5560.97
51_R114_A0.5530.97
131_I158_A0.5520.97
301_L452_V0.5520.97
434_T468_I0.5520.97
275_C292_V0.5520.97
99_G176_S0.5520.97
436_F538_R0.5510.97
473_C480_L0.5500.97
452_V478_R0.5500.97
260_L266_V0.5490.97
135_C140_N0.5490.97
537_R540_Q0.5480.97
178_I186_A0.5480.97
224_D227_D0.5480.97
280_V495_I0.5470.97
403_T406_A0.5470.97
495_I499_V0.5470.97
124_A158_A0.5460.97
55_R115_M0.5460.97
393_V436_F0.5450.97
405_N543_A0.5450.97
506_D512_Q0.5440.97
54_P116_F0.5440.97
485_S491_L0.5440.97
147_I208_S0.5440.97
62_E65_L0.5420.97
26_E485_S0.5420.97
202_C245_A0.5410.97
25_E484_A0.5410.97
313_V317_C0.5410.97
177_W186_A0.5400.97
202_C276_H0.5400.97
267_V501_A0.5400.97
279_A300_I0.5390.97
379_T431_I0.5380.97
395_L542_W0.5360.96
291_K299_D0.5350.96
246_D500_A0.5320.96
190_G255_E0.5320.96
11_S119_W0.5320.96
171_A175_A0.5320.96
17_L26_E0.5310.96
389_D428_G0.5300.96
191_T243_W0.5300.96
155_W206_H0.5290.96
313_V316_I0.5280.96
72_L76_Q0.5270.96
382_W428_G0.5270.96
378_L467_V0.5270.96
151_Y208_S0.5270.96
213_S306_Q0.5270.96
49_Q117_V0.5260.96
89_G206_H0.5260.96
91_T180_L0.5250.96
252_L256_W0.5250.96
299_D441_I0.5250.96
399_N419_L0.5240.96
55_R58_I0.5220.96
471_A535_L0.5220.96
52_H118_L0.5220.96
153_S408_Q0.5220.96
391_L538_R0.5220.96
297_T335_Q0.5200.96
490_A493_A0.5190.96
484_A518_V0.5180.96
469_M482_I0.5180.96
222_F226_L0.5180.96
185_P268_I0.5180.96
279_A321_D0.5180.96
392_P426_L0.5170.96
222_F225_E0.5170.96
401_R407_N0.5160.96
95_I175_A0.5160.96
245_A272_A0.5150.96
292_V458_L0.5150.96
95_I192_T0.5150.96
319_Q330_G0.5130.95
405_N410_L0.5120.95
134_L161_L0.5120.95
123_T166_Q0.5120.95
182_D240_T0.5110.95
100_N173_S0.5110.95
90_S119_W0.5100.95
60_S63_A0.5090.95
12_D15_R0.5090.95
533_E540_Q0.5080.95
392_P429_G0.5070.95
379_T467_V0.5060.95
125_V153_S0.5060.95
432_A436_F0.5030.95
472_C476_L0.5030.95
213_S216_G0.5020.95
295_T460_G0.5010.95
438_A472_C0.5010.95
76_Q80_V0.5010.95
132_T136_H0.5000.95
335_Q438_A0.5000.95
57_Y181_C0.5000.95
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
3ll3A 2 0.8657 100 0.166 Contact Map
3qdkA 2 0.9488 100 0.168 Contact Map
3hz6A 1 0.8516 100 0.186 Contact Map
3ifrA 2 0.8604 100 0.187 Contact Map
2itmA 2 0.8375 100 0.189 Contact Map
3wxlA 2 0.864 100 0.199 Contact Map
3l0qA 2 0.9011 100 0.201 Contact Map
3ezwA 3 0.8604 100 0.203 Contact Map
2d4wA 2 0.8622 100 0.21 Contact Map
3h3nX 3 0.864 100 0.21 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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