ARAA - ECOLI - GREMLIN Contacts

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ARAA - L-arabinose isomerase

UniProt:	P08202	Sequences: MTIFDNYEVWFVIGSQHLYGPETLRQVTQHAEHVVNALNTEAKLPCKLVLKPLGTTPDEITAICRDANYDDRCAGLVVWLHTFSPAKMWINGLTMLNKPLLQFHTQFNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKQAHERIGSWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDVNALVDEYESCYTMTPATQIHGKKRQNVLEAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFEKGNDLVLGSHMLEVCPSIAAEEKPILDVQHLGIGGKDDPARLIFNTQTGPAIVASLIDLGDRYRLLVNCIDTVKTPHSLPKLPVANALWKAQPDLPTASEAWILAGGAHHTVFSHALNLNDMRQFAEMHDIEITVIDNDTRLPAFKDALRWNEVYYGFRR	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG10052
Length:	500 (452)
Sequences:	1680 (889)
Seq/√Len:	41.8

ECOLI - ARAA
BACSU - ARAA

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
264_K	299_Q	5.348	1.00
217_V	269_Q	4.386	1.00
231_D	235_S	3.919	1.00
218_V	285_L	3.909	1.00
227_N	254_L	3.903	1.00
32_E	36_N	3.853	1.00
411_D	430_K	3.628	1.00
8_E	47_K	3.559	1.00
434_D	437_T	3.466	1.00
28_T	32_E	3.271	1.00
459_L	475_V	3.229	1.00
162_S	461_D	3.225	1.00
179_C	272_F	3.039	1.00
21_P	25_R	2.981	1.00
155_Q	436_P	2.944	1.00
170_K	469_H	2.915	1.00
222_S	225_D	2.854	1.00
231_D	234_E	2.820	1.00
225_D	265_R	2.808	1.00
217_V	265_R	2.800	1.00
230_V	254_L	2.692	1.00
170_K	174_R	2.587	1.00
407_V	473_I	2.584	1.00
394_A	462_M	2.572	1.00
465_F	469_H	2.536	1.00
286_K	377_D	2.501	1.00
227_N	231_D	2.470	1.00
392_I	462_M	2.450	1.00
221_I	261_L	2.437	1.00
330_S	358_I	2.422	1.00
411_D	432_Q	2.381	1.00
170_K	468_M	2.374	1.00
178_V	274_A	2.317	1.00
402_R	472_E	2.312	1.00
176_L	273_H	2.253	1.00
345_L	430_K	2.253	1.00
290_G	351_M	2.228	1.00
409_C	459_L	2.219	1.00
318_M	462_M	2.218	1.00
314_L	394_A	2.214	1.00
35_V	39_N	2.206	1.00
145_A	464_Q	2.202	1.00
396_L	405_L	2.137	0.99
181_F	214_L	2.129	0.99
8_E	49_V	2.118	0.99
340_E	343_N	2.080	0.99
409_C	457_L	2.004	0.99
159_R	440_E	1.986	0.99
277_T	303_F	1.985	0.99
261_L	265_R	1.949	0.99
120_F	124_N	1.941	0.99
263_M	292_A	1.935	0.99
229_L	232_E	1.934	0.99
390_P	411_D	1.924	0.99
315_L	452_V	1.896	0.99
177_K	271_G	1.896	0.99
29_Q	33_H	1.896	0.99
179_C	209_W	1.895	0.99
176_L	317_I	1.893	0.99
101_L	160_I	1.888	0.99
51_K	66_D	1.875	0.99
435_L	439_S	1.868	0.98
65_R	69_Y	1.860	0.98
8_E	72_R	1.842	0.98
176_L	274_A	1.825	0.98
463_R	475_V	1.808	0.98
207_N	272_F	1.805	0.98
147_V	160_I	1.795	0.98
239_M	253_V	1.784	0.98
223_D	258_R	1.769	0.98
332_M	354_V	1.760	0.98
305_G	351_M	1.717	0.97
39_N	47_K	1.716	0.97
171_Q	175_H	1.693	0.97
290_G	305_G	1.682	0.97
12_V	54_G	1.681	0.97
13_I	31_A	1.671	0.97
223_D	254_L	1.665	0.97
62_A	66_D	1.662	0.97
179_C	208_T	1.653	0.97
36_N	40_T	1.646	0.97
260_E	295_R	1.632	0.96
232_E	299_Q	1.626	0.96
198_A	313_A	1.614	0.96
75_G	167_A	1.603	0.96
395_S	448_A	1.599	0.96
173_T	317_I	1.581	0.96
391_A	412_T	1.577	0.96
102_Q	133_F	1.560	0.95
179_C	266_F	1.529	0.95
360_A	414_K	1.529	0.95
227_N	230_V	1.495	0.94
216_Q	220_S	1.495	0.94
154_K	158_E	1.488	0.94
86_A	133_F	1.485	0.94
225_D	228_A	1.481	0.94
109_A	340_E	1.479	0.94
367_D	383_I	1.466	0.94
387_Q	455_H	1.465	0.93
215_V	285_L	1.463	0.93
255_E	286_K	1.442	0.93
55_T	59_E	1.438	0.93
318_M	452_V	1.426	0.93
383_I	426_N	1.425	0.93
405_L	466_A	1.418	0.92
230_V	234_E	1.416	0.92
328_G	333_E	1.412	0.92
36_N	223_D	1.394	0.92
17_H	55_T	1.393	0.92
305_G	331_F	1.393	0.92
265_R	269_Q	1.389	0.92
217_V	220_S	1.387	0.91
28_T	31_A	1.386	0.91
158_E	162_S	1.386	0.91
9_V	46_C	1.383	0.91
274_A	452_V	1.383	0.91
256_A	380_A	1.374	0.91
322_S	457_L	1.374	0.91
386_T	427_A	1.368	0.91
459_L	473_I	1.362	0.91
202_F	403_Y	1.357	0.91
238_T	365_I	1.353	0.90
238_T	363_K	1.348	0.90
33_H	152_Q	1.332	0.90
46_C	74_A	1.331	0.90
211_V	281_D	1.330	0.90
330_S	355_C	1.323	0.89
29_Q	32_E	1.322	0.89
173_T	204_F	1.316	0.89
345_L	413_V	1.303	0.89
294_Q	382_L	1.301	0.89
33_H	37_A	1.287	0.88
463_R	473_I	1.284	0.88
251_Q	255_E	1.276	0.88
25_R	29_Q	1.274	0.88
224_G	228_A	1.274	0.88
208_T	278_T	1.272	0.87
76_L	100_L	1.269	0.87
30_H	34_V	1.264	0.87
233_Y	257_A	1.260	0.87
230_V	257_A	1.258	0.87
146_V	444_L	1.246	0.86
368_V	373_I	1.246	0.86
234_E	244_Q	1.241	0.86
104_H	439_S	1.237	0.86
256_A	291_L	1.236	0.86
35_V	48_L	1.227	0.85
110_A	340_E	1.226	0.85
264_K	268_E	1.225	0.85
161_G	165_R	1.220	0.85
91_N	199_Q	1.216	0.85
12_V	76_L	1.215	0.85
41_E	157_H	1.213	0.85
365_I	369_Q	1.208	0.85
9_V	164_M	1.205	0.84
444_L	467_E	1.204	0.84
159_R	436_P	1.200	0.84
409_C	432_Q	1.195	0.84
172_D	175_H	1.177	0.83
343_N	430_K	1.175	0.83
397_I	448_A	1.172	0.83
162_S	460_N	1.170	0.83
33_H	36_N	1.169	0.83
25_R	28_T	1.165	0.82
243_T	253_V	1.163	0.82
37_A	157_H	1.159	0.82
185_M	353_E	1.157	0.82
319_K	355_C	1.156	0.82
412_T	427_A	1.151	0.82
228_A	232_E	1.143	0.81
390_P	432_Q	1.143	0.81
90_I	133_F	1.140	0.81
368_V	371_L	1.135	0.81
253_V	368_V	1.134	0.81
137_G	142_Q	1.132	0.80
466_A	473_I	1.131	0.80
274_A	312_A	1.130	0.80
172_D	316_R	1.128	0.80
197_A	201_K	1.114	0.79
454_S	458_N	1.113	0.79
390_P	409_C	1.113	0.79
61_T	65_R	1.104	0.79
218_V	262_G	1.089	0.78
407_V	463_R	1.086	0.78
102_Q	134_G	1.079	0.77
255_E	259_I	1.070	0.77
232_E	236_C	1.070	0.77
229_L	261_L	1.064	0.76
340_E	344_D	1.061	0.76
220_S	231_D	1.059	0.76
172_D	317_I	1.055	0.76
366_L	371_L	1.055	0.76
166_Q	461_D	1.052	0.75
321_M	465_F	1.051	0.75
392_I	456_A	1.049	0.75
78_V	89_W	1.047	0.75
314_L	452_V	1.045	0.75
397_I	406_L	1.043	0.75
240_T	244_Q	1.043	0.75
321_M	461_D	1.042	0.75
73_C	76_L	1.040	0.74
194_D	197_A	1.040	0.74
410_I	451_T	1.036	0.74
9_V	256_A	1.035	0.74
39_N	42_A	1.031	0.74
331_F	334_D	1.031	0.74
199_Q	206_V	1.028	0.74
31_A	39_N	1.027	0.74
154_K	157_H	1.024	0.73
12_V	63_I	1.022	0.73
306_E	450_H	1.018	0.73
74_A	171_Q	1.015	0.73
134_G	443_I	1.012	0.72
393_V	451_T	1.011	0.72
175_H	178_V	1.010	0.72
188_V	279_F	1.009	0.72
409_C	475_V	1.008	0.72
253_V	256_A	1.007	0.72
370_H	373_I	1.005	0.72
369_Q	373_I	1.002	0.72
360_A	387_Q	1.001	0.72
222_S	228_A	0.995	0.71
200_I	400_G	0.994	0.71
322_S	458_N	0.993	0.71
169_S	465_F	0.988	0.71
17_H	56_T	0.987	0.71
268_E	301_Y	0.983	0.70
457_L	461_D	0.983	0.70
259_I	263_M	0.981	0.70
63_I	76_L	0.981	0.70
220_S	258_R	0.978	0.70
187_E	280_E	0.978	0.70
179_C	270_G	0.976	0.70
345_L	416_P	0.976	0.70
385_N	426_N	0.973	0.69
256_A	366_L	0.970	0.69
7_Y	171_Q	0.968	0.69
14_G	84_S	0.960	0.68
241_P	244_Q	0.956	0.68
44_L	161_G	0.950	0.68
78_V	133_F	0.949	0.67
39_N	48_L	0.946	0.67
221_I	226_V	0.946	0.67
158_E	161_G	0.945	0.67
128_H	449_H	0.944	0.67
215_V	286_K	0.943	0.67
330_S	333_E	0.941	0.67
228_A	231_D	0.940	0.67
261_L	394_A	0.938	0.67
332_M	348_G	0.937	0.66
66_D	71_D	0.935	0.66
440_E	444_L	0.928	0.66
68_N	97_N	0.922	0.65
202_F	396_L	0.922	0.65
36_N	39_N	0.920	0.65
346_V	431_A	0.919	0.65
26_Q	123_L	0.919	0.65
26_Q	34_V	0.914	0.65
138_A	474_T	0.913	0.64
37_A	40_T	0.911	0.64
233_Y	295_R	0.911	0.64
26_Q	29_Q	0.907	0.64
174_R	432_Q	0.905	0.64
30_H	126_T	0.904	0.64
61_T	91_N	0.899	0.63
368_V	380_A	0.899	0.63
36_N	231_D	0.898	0.63
174_R	258_R	0.897	0.63
224_G	227_N	0.896	0.63
344_D	436_P	0.895	0.63
57_P	187_E	0.893	0.63
94_T	200_I	0.892	0.63
28_T	52_P	0.889	0.62
167_A	468_M	0.886	0.62
204_F	313_A	0.885	0.62
267_L	301_Y	0.883	0.62
201_K	471_I	0.879	0.61
83_F	188_V	0.875	0.61
359_A	387_Q	0.874	0.61
363_K	366_L	0.874	0.61
211_V	285_L	0.873	0.61
269_Q	390_P	0.872	0.61
172_D	274_A	0.870	0.61
119_D	124_N	0.870	0.61
33_H	107_F	0.868	0.60
388_T	414_K	0.865	0.60
260_E	264_K	0.865	0.60
355_C	358_I	0.862	0.60
223_D	227_N	0.859	0.60
56_T	59_E	0.858	0.60
154_K	235_S	0.854	0.59
395_S	405_L	0.852	0.59
120_F	123_L	0.851	0.59
169_S	317_I	0.849	0.59
375_G	379_P	0.847	0.59
387_Q	456_A	0.842	0.58
277_T	291_L	0.842	0.58
328_G	334_D	0.838	0.58
188_V	349_S	0.838	0.58
159_R	460_N	0.835	0.57
10_W	67_A	0.833	0.57
358_I	387_Q	0.831	0.57
365_I	368_V	0.831	0.57
78_V	100_L	0.828	0.57
172_D	320_V	0.827	0.57
226_V	230_V	0.827	0.57
298_Q	357_S	0.826	0.57
322_S	329_T	0.825	0.57
192_D	195_K	0.824	0.56
188_V	424_V	0.823	0.56
155_Q	158_E	0.823	0.56
458_N	461_D	0.823	0.56
209_W	213_D	0.822	0.56
74_A	168_V	0.821	0.56
165_R	461_D	0.820	0.56
126_T	293_V	0.818	0.56
394_A	407_V	0.817	0.56
83_F	190_V	0.816	0.56
396_L	471_I	0.815	0.56
367_D	373_I	0.812	0.55
243_T	380_A	0.809	0.55
277_T	293_V	0.809	0.55
28_T	39_N	0.809	0.55
175_H	273_H	0.807	0.55
54_G	59_E	0.804	0.55
142_Q	162_S	0.803	0.55
334_D	442_W	0.802	0.54
238_T	362_E	0.800	0.54
214_L	263_M	0.800	0.54
30_H	33_H	0.799	0.54
39_N	44_L	0.799	0.54
302_G	319_K	0.798	0.54
230_V	239_M	0.798	0.54
125_Q	335_Y	0.796	0.54
175_H	271_G	0.795	0.54
391_A	453_F	0.795	0.54
405_L	471_I	0.791	0.53
7_Y	168_V	0.791	0.53
173_T	313_A	0.788	0.53
97_N	174_R	0.787	0.53
311_T	395_S	0.787	0.53
362_E	385_N	0.785	0.53
133_F	137_G	0.783	0.53
54_G	76_L	0.782	0.53
153_D	436_P	0.781	0.52
464_Q	467_E	0.781	0.52
31_A	34_V	0.779	0.52
407_V	459_L	0.777	0.52
143_Q	440_E	0.776	0.52
28_T	38_L	0.776	0.52
214_L	462_M	0.774	0.52
446_G	449_H	0.774	0.52
405_L	462_M	0.773	0.52
350_H	446_G	0.771	0.52
94_T	217_V	0.769	0.51
90_I	140_M	0.766	0.51
223_D	226_V	0.766	0.51
253_V	380_A	0.762	0.51
388_T	412_T	0.761	0.51
103_F	156_A	0.761	0.51
65_R	95_M	0.761	0.51
143_Q	470_D	0.760	0.50
329_T	456_A	0.759	0.50
304_A	349_S	0.758	0.50
226_V	258_R	0.757	0.50
86_A	185_M	0.757	0.50
235_S	463_R	0.749	0.49
330_S	354_V	0.747	0.49
353_E	383_I	0.744	0.49
239_M	244_Q	0.744	0.49
9_V	74_A	0.744	0.49
229_L	264_K	0.742	0.49
58_D	62_A	0.742	0.49
169_S	172_D	0.742	0.49
180_R	309_W	0.741	0.49
99_P	389_G	0.739	0.49
158_E	224_G	0.736	0.48
172_D	176_L	0.736	0.48
206_V	304_A	0.736	0.48
412_T	455_H	0.735	0.48
268_E	299_Q	0.734	0.48
23_T	26_Q	0.734	0.48
359_A	384_F	0.733	0.48
278_T	448_A	0.732	0.48
154_K	223_D	0.732	0.48
65_R	68_N	0.731	0.48
338_H	345_L	0.729	0.48
364_P	371_L	0.726	0.47
358_I	391_A	0.724	0.47
412_T	453_F	0.721	0.47
304_A	312_A	0.720	0.47
153_D	156_A	0.718	0.47
59_E	62_A	0.716	0.46
300_G	350_H	0.714	0.46
173_T	461_D	0.709	0.46
351_M	424_V	0.709	0.46
226_V	254_L	0.708	0.46
16_Q	19_Y	0.705	0.45
68_N	95_M	0.704	0.45
54_G	63_I	0.703	0.45
204_F	256_A	0.702	0.45
44_L	47_K	0.700	0.45
180_R	208_T	0.699	0.45
77_V	101_L	0.695	0.44
362_E	387_Q	0.694	0.44
94_T	140_M	0.694	0.44
34_V	77_V	0.691	0.44
37_A	152_Q	0.687	0.44
138_A	168_V	0.686	0.44
161_G	224_G	0.686	0.44
327_G	456_A	0.686	0.44
217_V	221_I	0.683	0.43
162_S	166_Q	0.683	0.43
279_F	424_V	0.679	0.43
148_T	440_E	0.678	0.43
45_P	161_G	0.678	0.43
265_R	268_E	0.678	0.43
111_L	427_A	0.676	0.43
452_V	462_M	0.676	0.43
31_A	35_V	0.675	0.43
95_M	271_G	0.675	0.43
7_Y	74_A	0.674	0.42
108_N	124_N	0.672	0.42
176_L	452_V	0.672	0.42
193_G	309_W	0.672	0.42
29_Q	224_G	0.670	0.42
108_N	120_F	0.669	0.42
75_G	163_W	0.666	0.42
212_G	283_H	0.665	0.42
390_P	457_L	0.664	0.42
187_E	456_A	0.664	0.42
33_H	158_E	0.662	0.41
82_T	86_A	0.662	0.41
143_Q	174_R	0.662	0.41
219_N	231_D	0.662	0.41
318_M	394_A	0.662	0.41
291_L	366_L	0.660	0.41
36_N	41_E	0.660	0.41
76_L	302_G	0.659	0.41
352_L	425_A	0.656	0.41
392_I	409_C	0.654	0.41
43_K	161_G	0.652	0.40
36_N	42_A	0.651	0.40
263_M	299_Q	0.649	0.40
362_E	414_K	0.649	0.40
350_H	449_H	0.649	0.40
216_Q	284_G	0.649	0.40
153_D	158_E	0.648	0.40
157_H	161_G	0.648	0.40
71_D	239_M	0.647	0.40
26_Q	30_H	0.647	0.40
187_E	315_L	0.644	0.40
134_G	146_V	0.644	0.40
275_F	293_V	0.643	0.40
205_S	426_N	0.642	0.40
209_W	266_F	0.642	0.40
83_F	279_F	0.641	0.39
279_F	333_E	0.641	0.39
198_A	309_W	0.640	0.39
52_P	59_E	0.640	0.39
73_C	118_M	0.639	0.39
65_R	235_S	0.638	0.39
63_I	214_L	0.636	0.39
222_S	231_D	0.635	0.39
267_L	275_F	0.634	0.39
17_H	59_E	0.631	0.39
119_D	123_L	0.630	0.39
268_E	271_G	0.630	0.39
165_R	176_L	0.627	0.38
459_L	463_R	0.626	0.38
274_A	317_I	0.625	0.38
239_M	243_T	0.625	0.38
83_F	449_H	0.624	0.38
227_N	235_S	0.623	0.38
44_L	48_L	0.622	0.38
37_A	158_E	0.621	0.38
251_Q	254_L	0.621	0.38
224_G	342_G	0.621	0.38
31_A	42_A	0.620	0.38
404_R	445_A	0.619	0.38
344_D	434_D	0.618	0.37
314_L	395_S	0.618	0.37
169_S	462_M	0.618	0.37
293_V	303_F	0.617	0.37
61_T	97_N	0.615	0.37
48_L	161_G	0.614	0.37
47_K	158_E	0.612	0.37
279_F	349_S	0.612	0.37
238_T	268_E	0.612	0.37
222_S	226_V	0.612	0.37
318_M	322_S	0.612	0.37
344_D	430_K	0.610	0.37
39_N	225_D	0.609	0.37
160_I	232_E	0.608	0.37
363_K	372_G	0.608	0.37
364_P	368_V	0.607	0.36
36_N	365_I	0.607	0.36
335_Y	351_M	0.605	0.36
392_I	459_L	0.604	0.36
57_P	231_D	0.604	0.36
83_F	290_G	0.603	0.36
7_Y	164_M	0.603	0.36
267_L	303_F	0.603	0.36
461_D	465_F	0.603	0.36
262_G	272_F	0.603	0.36
132_E	190_V	0.601	0.36
33_H	468_M	0.600	0.36
25_R	37_A	0.600	0.36
120_F	126_T	0.599	0.36
399_L	404_R	0.597	0.36
9_V	465_F	0.595	0.35
296_L	303_F	0.593	0.35
416_P	421_K	0.593	0.35
333_E	352_L	0.591	0.35
32_E	39_N	0.591	0.35
29_Q	36_N	0.591	0.35
15_S	20_G	0.591	0.35
358_I	427_A	0.591	0.35
323_T	327_G	0.590	0.35
158_E	227_N	0.589	0.35
197_A	401_D	0.588	0.35
58_D	177_K	0.588	0.35
251_Q	411_D	0.585	0.35
407_V	462_M	0.585	0.35
7_Y	46_C	0.585	0.35
29_Q	43_K	0.583	0.34
158_E	228_A	0.582	0.34
235_S	342_G	0.582	0.34
229_L	260_E	0.577	0.34
126_T	428_L	0.577	0.34
69_Y	224_G	0.577	0.34
194_D	400_G	0.577	0.34
296_L	301_Y	0.576	0.34
35_V	44_L	0.576	0.34
9_V	253_V	0.576	0.34
395_S	451_T	0.576	0.34
278_T	281_D	0.575	0.34
125_Q	131_R	0.573	0.34
9_V	77_V	0.573	0.34
279_F	351_M	0.573	0.34
369_Q	372_G	0.573	0.34
469_H	473_I	0.572	0.34
129_G	308_D	0.571	0.33
118_M	122_N	0.571	0.33
173_T	178_V	0.570	0.33
431_A	438_A	0.566	0.33
408_N	438_A	0.565	0.33
209_W	214_L	0.564	0.33
318_M	454_S	0.564	0.33
65_R	72_R	0.564	0.33
12_V	264_K	0.563	0.33
38_L	46_C	0.563	0.33
50_L	66_D	0.562	0.33
86_A	191_T	0.560	0.33
58_D	65_R	0.559	0.32
42_A	160_I	0.558	0.32
427_A	430_K	0.558	0.32
204_F	274_A	0.558	0.32
172_D	273_H	0.558	0.32
215_V	219_N	0.558	0.32
62_A	223_D	0.558	0.32
81_H	139_R	0.558	0.32
61_T	152_Q	0.557	0.32
349_S	424_V	0.556	0.32
30_H	38_L	0.556	0.32
48_L	77_V	0.555	0.32
257_A	328_G	0.555	0.32
387_Q	475_V	0.554	0.32
128_H	279_F	0.554	0.32
36_N	62_A	0.554	0.32
128_H	351_M	0.553	0.32
54_G	60_I	0.553	0.32
205_S	272_F	0.553	0.32
125_Q	185_M	0.552	0.32
342_G	440_E	0.551	0.32
177_K	270_G	0.549	0.32
178_V	219_N	0.549	0.32
233_Y	260_E	0.547	0.31
213_D	270_G	0.546	0.31
143_Q	467_E	0.546	0.31
158_E	460_N	0.545	0.31
230_V	253_V	0.545	0.31
41_E	46_C	0.544	0.31
143_Q	175_H	0.543	0.31
9_V	204_F	0.543	0.31
345_L	428_L	0.542	0.31
125_Q	128_H	0.541	0.31
224_G	299_Q	0.541	0.31
251_Q	286_K	0.541	0.31
42_A	72_R	0.541	0.31
71_D	362_E	0.541	0.31
311_T	314_L	0.540	0.31
28_T	34_V	0.540	0.31
368_V	372_G	0.540	0.31
404_R	472_E	0.539	0.31
47_K	231_D	0.538	0.31
54_G	69_Y	0.538	0.31
169_S	321_M	0.538	0.31
13_I	53_L	0.538	0.31
230_V	436_P	0.537	0.31
38_L	161_G	0.537	0.31
297_M	353_E	0.537	0.31
178_V	273_H	0.537	0.31
86_A	179_C	0.537	0.31
74_A	133_F	0.536	0.31
54_G	235_S	0.535	0.30
339_F	344_D	0.534	0.30
107_F	126_T	0.533	0.30
214_L	221_I	0.533	0.30
128_H	188_V	0.532	0.30
317_I	321_M	0.532	0.30
393_V	408_N	0.532	0.30
62_A	174_R	0.532	0.30
455_H	473_I	0.531	0.30
371_L	379_P	0.531	0.30
172_D	178_V	0.529	0.30
125_Q	188_V	0.529	0.30
100_L	142_Q	0.529	0.30
372_G	375_G	0.528	0.30
226_V	261_L	0.527	0.30
65_R	97_N	0.526	0.30
36_N	228_A	0.526	0.30
83_F	351_M	0.526	0.30
43_K	141_R	0.526	0.30
44_L	160_I	0.524	0.30
27_V	31_A	0.524	0.30
9_V	427_A	0.523	0.30
169_S	177_K	0.523	0.30
192_D	349_S	0.523	0.30
83_F	424_V	0.523	0.30
25_R	228_A	0.523	0.30
330_S	334_D	0.522	0.29
181_F	275_F	0.522	0.29
391_A	410_I	0.521	0.29
36_N	224_G	0.521	0.29
47_K	225_D	0.520	0.29
238_T	390_P	0.520	0.29
97_N	231_D	0.520	0.29
58_D	271_G	0.519	0.29
331_F	358_I	0.519	0.29
176_L	258_R	0.519	0.29
177_K	205_S	0.518	0.29
228_A	412_T	0.518	0.29
185_M	188_V	0.518	0.29
320_V	410_I	0.518	0.29
224_G	241_P	0.518	0.29
69_Y	228_A	0.517	0.29
153_D	164_M	0.516	0.29
95_M	274_A	0.516	0.29
223_D	251_Q	0.516	0.29
162_S	169_S	0.515	0.29
33_H	40_T	0.514	0.29
188_V	290_G	0.514	0.29
62_A	460_N	0.514	0.29
438_A	441_A	0.513	0.29
170_K	465_F	0.512	0.29
30_H	39_N	0.512	0.29
236_C	414_K	0.511	0.29
231_D	238_T	0.511	0.29
266_F	272_F	0.509	0.28
271_G	411_D	0.509	0.28
251_Q	467_E	0.509	0.28
12_V	141_R	0.508	0.28
359_A	386_T	0.508	0.28
57_P	91_N	0.507	0.28
204_F	465_F	0.507	0.28
362_E	365_I	0.507	0.28
328_G	357_S	0.506	0.28
25_R	42_A	0.506	0.28
36_N	230_V	0.505	0.28
201_K	264_K	0.505	0.28
173_T	176_L	0.505	0.28
36_N	219_N	0.504	0.28
64_C	98_K	0.504	0.28
228_A	460_N	0.502	0.28
188_V	351_M	0.502	0.28
263_M	303_F	0.501	0.28
132_E	193_G	0.500	0.28

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4f2dA	5	0.992	100	0.258	Contact Map
4lqlA	5	0.942	100	0.318	Contact Map
1fuiA	5	0.952	100	0.389	Contact Map
3a9sA	5	0.952	100	0.4	Contact Map
3rotA	2	0.52	96.7	0.947	Contact Map
4rxmA	1	0.556	96.5	0.947	Contact Map
3hs3A	2	0.506	95.9	0.951	Contact Map
4rk1A	4	0.524	95.6	0.952	Contact Map
3gbvA	2	0.544	95.5	0.952	Contact Map
3l6uA	2	0.522	95.4	0.952	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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