USHA - ECOLI - GREMLIN Contacts

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USHA - Protein UshA

UniProt:	P07024	Sequences: MKLLQRGVALALLTTFTLASETALAYEQDKTYKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYDAMAIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQDPVCMAAENKKQVDYVPGTPCKPDQQNGIWIVQAHEWGKYVGRADFEFRNGEMKMVNYQLIPVNLKKKVTWEDGKSERVLYTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRDKVRFVQTNMGRLILAAQMDRTGADFAVMSGGGIRDSIEAGDISYKNVLKVQPFGNVVVYADMTGKEVIDYLTAVAQMKPDSGAYPQFANVSFVAKDGKLNDLKIKGEPVDPAKTYRMATLNFNATGGDGYPRLDNKPGYVNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSWQ	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG11060
Length:	550 (461)
Sequences:	5169 (3685)
Seq/√Len:	171.6

ECOLI - USHA CPDB
BACSU - YUND NTPES YHCR
HALSA - Q9HPZ0 Q9HPW1

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
444_I	487_P	3.748	1.00
441_K	445_D	3.455	1.00
437_D	490_T	3.449	1.00
363_K	417_D	3.254	1.00
39_T	109_Y	3.202	1.00
60_K	64_D	3.140	1.00
155_W	199_V	2.993	1.00
439_T	442_E	2.961	1.00
158_F	167_V	2.921	1.00
64_D	342_N	2.894	1.00
469_V	477_D	2.894	1.00
478_L	485_V	2.869	1.00
486_D	489_K	2.859	1.00
80_L	167_V	2.848	1.00
444_I	478_L	2.757	1.00
346_I	350_S	2.683	1.00
350_S	354_N	2.609	1.00
365_G	530_I	2.608	1.00
190_R	195_E	2.572	1.00
111_A	167_V	2.565	1.00
467_S	479_K	2.562	1.00
170_L	196_A	2.536	1.00
166_A	203_L	2.510	1.00
199_V	202_E	2.478	1.00
235_E	239_A	2.434	1.00
197_K	201_Q	2.364	1.00
35_T	297_R	2.332	1.00
237_A	248_I	2.301	1.00
33_K	301_E	2.291	1.00
166_A	209_P	2.288	1.00
341_E	346_I	2.261	1.00
80_L	215_A	2.198	1.00
63_V	79_L	2.197	1.00
437_D	492_R	2.114	1.00
366_E	417_D	2.080	1.00
36_V	213_I	2.079	1.00
79_L	109_Y	2.069	1.00
394_M	464_A	2.061	1.00
160_R	165_I	2.038	1.00
202_E	207_E	2.033	1.00
479_K	484_P	2.005	1.00
105_N	134_K	1.992	1.00
343_Q	347_S	1.989	1.00
204_Q	244_S	1.988	1.00
106_L	348_L	1.968	1.00
157_L	164_K	1.958	1.00
143_Y	190_R	1.956	1.00
241_P	244_S	1.923	1.00
62_L	295_V	1.916	1.00
200_I	240_L	1.915	1.00
139_S	171_T	1.902	1.00
35_T	299_D	1.892	1.00
441_K	487_P	1.874	1.00
79_L	107_V	1.865	1.00
33_K	299_D	1.855	1.00
391_A	464_A	1.850	1.00
247_M	298_A	1.850	1.00
438_M	493_M	1.822	1.00
144_Q	147_T	1.805	1.00
438_M	443_V	1.795	1.00
203_L	209_P	1.768	1.00
157_L	209_P	1.759	1.00
201_Q	205_Q	1.751	1.00
448_T	472_D	1.738	1.00
362_V	531_Q	1.734	1.00
105_N	135_F	1.709	1.00
204_Q	212_I	1.708	1.00
163_L	211_I	1.703	1.00
435_Y	492_R	1.689	1.00
101_F	105_N	1.687	1.00
111_A	156_A	1.683	1.00
80_L	111_A	1.682	1.00
159_K	162_D	1.681	1.00
240_L	244_S	1.670	1.00
422_N	425_K	1.651	1.00
214_A	245_L	1.648	1.00
36_V	247_M	1.630	1.00
66_I	297_R	1.626	1.00
448_T	474_K	1.619	1.00
133_A	137_L	1.607	1.00
439_T	490_T	1.592	1.00
447_L	478_L	1.590	1.00
247_M	284_W	1.590	1.00
145_K	186_D	1.583	1.00
111_A	138_L	1.579	1.00
111_A	136_P	1.573	1.00
284_W	312_Y	1.570	1.00
370_R	415_A	1.545	1.00
401_F	443_V	1.536	1.00
38_H	249_V	1.524	1.00
168_I	196_A	1.523	1.00
39_T	81_S	1.517	1.00
74_G	77_V	1.502	1.00
524_E	528_A	1.497	1.00
190_R	198_L	1.494	1.00
367_T	418_I	1.492	1.00
175_T	189_F	1.490	1.00
159_K	164_K	1.485	1.00
441_K	488_A	1.479	1.00
40_N	288_A	1.472	1.00
247_M	300_F	1.468	1.00
438_M	442_E	1.467	1.00
200_I	244_S	1.463	1.00
395_D	533_S	1.453	1.00
233_D	250_G	1.452	1.00
418_I	530_I	1.445	1.00
248_I	285_I	1.443	1.00
67_R	79_L	1.441	1.00
449_A	508_R	1.441	1.00
364_I	423_V	1.440	1.00
420_Y	527_K	1.437	1.00
483_E	489_K	1.436	1.00
195_E	199_V	1.426	1.00
443_V	485_V	1.421	1.00
436_A	500_A	1.416	1.00
82_G	249_V	1.412	1.00
191_K	194_D	1.404	1.00
78_L	158_F	1.403	1.00
37_L	77_V	1.386	1.00
368_N	537_D	1.382	1.00
200_I	212_I	1.378	1.00
106_L	344_Q	1.369	1.00
362_V	420_Y	1.359	1.00
395_D	532_K	1.357	1.00
389_I	409_I	1.354	1.00
112_M	135_F	1.342	1.00
155_W	202_E	1.332	1.00
446_Y	508_R	1.331	1.00
136_P	156_A	1.323	1.00
154_P	199_V	1.323	1.00
125_V	128_Q	1.302	1.00
277_P	280_Q	1.296	1.00
437_D	513_P	1.292	1.00
471_K	476_N	1.289	1.00
145_K	188_E	1.280	1.00
81_S	109_Y	1.280	1.00
451_A	470_A	1.279	1.00
393_Q	402_A	1.266	1.00
59_Q	295_V	1.261	1.00
414_E	422_N	1.252	1.00
400_D	489_K	1.250	1.00
253_S	287_Q	1.245	1.00
45_H	291_W	1.244	1.00
442_E	511_N	1.243	1.00
297_R	317_V	1.241	1.00
249_V	298_A	1.239	1.00
301_E	311_N	1.238	1.00
61_T	65_G	1.237	1.00
62_L	339_I	1.237	1.00
86_N	129_Q	1.232	1.00
62_L	65_G	1.232	1.00
403_V	443_V	1.228	1.00
173_D	192_P	1.227	1.00
469_V	476_N	1.227	1.00
143_Y	195_E	1.224	1.00
155_W	166_A	1.220	1.00
64_D	344_Q	1.219	1.00
357_K	361_E	1.218	1.00
197_K	241_P	1.209	1.00
211_I	302_F	1.208	1.00
382_Q	387_R	1.206	1.00
209_P	212_I	1.206	1.00
113_A	138_L	1.205	1.00
57_A	346_I	1.205	1.00
249_V	286_V	1.205	1.00
198_L	202_E	1.203	1.00
47_W	353_Q	1.196	1.00
38_H	296_G	1.195	1.00
42_H	56_L	1.190	1.00
303_R	310_V	1.188	1.00
153_K	156_A	1.184	1.00
300_F	309_M	1.181	1.00
217_H	252_H	1.180	1.00
197_K	239_A	1.179	1.00
34_I	165_I	1.173	1.00
101_F	133_A	1.170	1.00
395_D	529_Y	1.164	1.00
440_G	491_Y	1.163	1.00
117_H	120_D	1.153	1.00
36_V	249_V	1.152	1.00
196_A	245_L	1.149	1.00
98_E	102_R	1.148	1.00
200_I	245_L	1.143	1.00
168_I	199_V	1.139	1.00
59_Q	63_V	1.136	1.00
397_T	435_Y	1.133	1.00
60_K	345_M	1.131	1.00
193_A	239_A	1.130	1.00
112_M	137_L	1.130	1.00
78_L	167_V	1.125	1.00
42_H	292_G	1.123	1.00
235_E	238_R	1.106	1.00
37_L	66_I	1.105	1.00
111_A	158_F	1.105	1.00
290_E	293_K	1.102	1.00
58_A	341_E	1.101	1.00
401_F	493_M	1.098	1.00
106_L	345_M	1.095	1.00
471_K	474_K	1.091	1.00
361_E	421_K	1.088	1.00
467_S	482_G	1.086	1.00
84_D	116_N	1.082	1.00
439_T	488_A	1.071	1.00
168_I	214_A	1.066	1.00
363_K	366_E	1.065	1.00
289_H	293_K	1.065	1.00
105_N	133_A	1.065	1.00
113_A	169_G	1.060	1.00
392_A	529_Y	1.060	1.00
347_S	350_S	1.059	1.00
205_Q	208_K	1.057	1.00
234_V	238_R	1.057	1.00
194_D	197_K	1.055	1.00
203_L	212_I	1.053	0.99
168_I	203_L	1.052	0.99
114_I	130_E	1.050	0.99
31_T	301_E	1.050	0.99
302_F	309_M	1.044	0.99
40_N	287_Q	1.044	0.99
155_W	207_E	1.043	0.99
367_T	370_R	1.042	0.99
433_V	494_A	1.041	0.99
390_L	402_A	1.038	0.99
480_I	491_Y	1.036	0.99
502_G	505_G	1.030	0.99
432_V	497_N	1.028	0.99
463_F	466_V	1.026	0.99
61_T	339_I	1.024	0.99
92_S	121_N	1.017	0.99
63_V	67_R	1.012	0.99
527_K	531_Q	1.012	0.99
437_D	514_G	1.008	0.99
195_E	198_L	1.006	0.99
394_M	399_A	1.006	0.99
219_G	253_S	1.002	0.99
450_V	461_P	1.001	0.99
247_M	312_Y	0.995	0.99
363_K	419_S	0.993	0.99
98_E	128_Q	0.992	0.99
139_S	142_I	0.989	0.99
35_T	77_V	0.988	0.99
110_D	160_R	0.988	0.99
163_L	210_D	0.985	0.99
232_G	235_E	0.984	0.99
401_F	480_I	0.982	0.99
104_M	135_F	0.982	0.99
407_G	410_R	0.980	0.99
156_A	167_V	0.979	0.99
303_R	306_E	0.975	0.99
218_M	236_M	0.975	0.99
240_L	245_L	0.973	0.99
448_T	475_L	0.973	0.99
369_G	384_N	0.968	0.99
78_L	160_R	0.968	0.99
182_E	185_T	0.968	0.99
44_G	92_S	0.967	0.99
370_R	414_E	0.966	0.99
38_H	82_G	0.965	0.99
486_D	491_Y	0.963	0.99
62_L	319_L	0.963	0.99
59_Q	292_G	0.963	0.99
521_I	524_E	0.961	0.99
289_H	294_Y	0.956	0.99
81_S	85_I	0.955	0.99
123_L	127_R	0.947	0.99
396_R	528_A	0.946	0.99
130_E	137_L	0.944	0.99
396_R	525_V	0.942	0.99
104_M	109_Y	0.940	0.99
56_L	103_G	0.936	0.99
211_I	300_F	0.935	0.99
359_Q	362_V	0.933	0.99
256_P	294_Y	0.930	0.99
451_A	468_F	0.930	0.99
190_R	194_D	0.928	0.99
167_V	215_A	0.928	0.99
196_A	236_M	0.928	0.99
196_A	214_A	0.924	0.99
116_N	252_H	0.919	0.99
353_Q	357_K	0.918	0.99
193_A	197_K	0.918	0.99
65_G	68_K	0.917	0.99
286_V	298_A	0.917	0.99
389_I	427_Q	0.916	0.99
466_V	480_I	0.910	0.99
37_L	297_R	0.910	0.99
351_P	355_K	0.909	0.99
354_N	358_A	0.909	0.99
446_Y	509_L	0.907	0.98
410_R	429_F	0.906	0.98
125_V	129_Q	0.906	0.98
31_T	304_N	0.904	0.98
234_V	278_D	0.903	0.98
201_Q	241_P	0.900	0.98
101_F	129_Q	0.900	0.98
140_A	195_E	0.899	0.98
386_G	462_Q	0.899	0.98
297_R	315_I	0.899	0.98
57_A	345_M	0.894	0.98
503_G	506_Y	0.891	0.98
371_L	384_N	0.891	0.98
423_V	527_K	0.887	0.98
345_M	348_L	0.887	0.98
142_I	187_I	0.887	0.98
143_Y	150_R	0.886	0.98
123_L	187_I	0.885	0.98
114_I	152_F	0.885	0.98
530_I	536_L	0.882	0.98
62_L	66_I	0.881	0.98
447_L	468_F	0.881	0.98
423_V	523_A	0.881	0.98
442_E	445_D	0.879	0.98
411_D	425_K	0.877	0.98
61_T	340_A	0.877	0.98
159_K	165_I	0.873	0.98
508_R	511_N	0.872	0.98
404_M	408_G	0.867	0.98
120_D	179_G	0.867	0.98
57_A	341_E	0.867	0.98
217_H	254_Q	0.866	0.98
128_Q	131_K	0.865	0.98
405_S	408_G	0.864	0.98
366_E	535_P	0.863	0.98
390_L	404_M	0.861	0.98
367_T	371_L	0.861	0.98
84_D	217_H	0.861	0.98
520_F	528_A	0.859	0.98
103_G	345_M	0.856	0.98
441_K	444_I	0.854	0.98
447_L	475_L	0.853	0.98
102_R	348_L	0.853	0.98
65_G	340_A	0.852	0.98
212_I	244_S	0.848	0.98
65_G	339_I	0.848	0.98
34_I	300_F	0.845	0.98
113_A	139_S	0.844	0.98
116_N	217_H	0.843	0.98
399_A	494_A	0.842	0.98
35_T	66_I	0.842	0.98
385_M	426_V	0.841	0.98
528_A	531_Q	0.837	0.97
179_G	183_Y	0.836	0.97
43_H	254_Q	0.836	0.97
256_P	289_H	0.830	0.97
220_H	257_V	0.830	0.97
98_E	132_W	0.829	0.97
85_I	112_M	0.826	0.97
388_L	392_A	0.825	0.97
280_Q	285_I	0.822	0.97
39_T	59_Q	0.820	0.97
173_D	191_K	0.819	0.97
36_V	78_L	0.817	0.97
368_N	535_P	0.817	0.97
194_D	198_L	0.812	0.97
399_A	492_R	0.812	0.97
123_L	186_D	0.811	0.97
299_D	313_Q	0.811	0.97
176_A	189_F	0.811	0.97
192_P	236_M	0.810	0.97
444_I	485_V	0.807	0.97
43_H	88_G	0.805	0.97
369_G	538_V	0.801	0.97
67_R	108_G	0.801	0.97
143_Y	188_E	0.799	0.97
408_G	429_F	0.798	0.97
160_R	167_V	0.798	0.97
199_V	203_L	0.797	0.97
39_T	79_L	0.795	0.97
62_L	317_V	0.794	0.97
279_Q	282_G	0.794	0.97
34_I	302_F	0.793	0.96
43_H	252_H	0.792	0.96
73_E	76_S	0.790	0.96
387_R	464_A	0.789	0.96
461_P	506_Y	0.789	0.96
497_N	501_T	0.789	0.96
402_A	494_A	0.787	0.96
110_D	158_F	0.786	0.96
401_F	491_Y	0.786	0.96
41_D	254_Q	0.784	0.96
136_P	153_K	0.781	0.96
373_G	412_S	0.774	0.96
117_H	217_H	0.774	0.96
155_W	203_L	0.774	0.96
96_D	121_N	0.773	0.96
116_N	254_Q	0.771	0.96
392_A	525_V	0.770	0.96
394_M	402_A	0.769	0.96
60_K	107_V	0.768	0.96
461_P	468_F	0.768	0.96
406_G	458_G	0.768	0.96
368_N	538_V	0.766	0.96
34_I	163_L	0.765	0.96
84_D	254_Q	0.764	0.96
445_D	508_R	0.763	0.96
250_G	287_Q	0.761	0.96
484_P	487_P	0.760	0.96
142_I	189_F	0.759	0.95
79_L	295_V	0.758	0.95
397_T	494_A	0.756	0.95
429_F	498_F	0.755	0.95
232_G	236_M	0.750	0.95
157_L	207_E	0.750	0.95
84_D	117_H	0.749	0.95
391_A	395_D	0.748	0.95
102_R	352_F	0.746	0.95
303_R	308_K	0.742	0.95
447_L	466_V	0.741	0.95
157_L	166_A	0.740	0.95
216_T	233_D	0.738	0.95
495_T	500_A	0.738	0.95
442_E	512_K	0.737	0.95
138_L	156_A	0.735	0.95
166_A	212_I	0.734	0.95
142_I	171_T	0.733	0.95
219_G	252_H	0.731	0.94
48_R	341_E	0.731	0.94
445_D	511_N	0.730	0.94
165_I	213_I	0.727	0.94
64_D	68_K	0.727	0.94
447_L	463_F	0.726	0.94
216_T	250_G	0.726	0.94
174_D	177_K	0.726	0.94
403_V	493_M	0.726	0.94
234_V	285_I	0.724	0.94
401_F	466_V	0.723	0.94
201_Q	209_P	0.722	0.94
170_L	216_T	0.721	0.94
394_M	492_R	0.721	0.94
37_L	79_L	0.720	0.94
347_S	351_P	0.720	0.94
456_D	459_A	0.719	0.94
43_H	219_G	0.717	0.94
373_G	385_M	0.717	0.94
212_I	245_L	0.717	0.94
45_H	89_V	0.717	0.94
277_P	281_N	0.716	0.94
102_R	351_P	0.716	0.94
340_A	343_Q	0.716	0.94
436_A	495_T	0.716	0.94
158_F	165_I	0.715	0.94
348_L	352_F	0.715	0.94
48_R	54_Y	0.714	0.94
393_Q	496_L	0.709	0.94
84_D	252_H	0.708	0.93
129_Q	132_W	0.706	0.93
200_I	204_Q	0.705	0.93
438_M	512_K	0.700	0.93
280_Q	283_I	0.697	0.93
487_P	491_Y	0.697	0.93
184_F	189_F	0.697	0.93
399_A	435_Y	0.696	0.93
497_N	522_D	0.696	0.93
95_Q	352_F	0.696	0.93
529_Y	533_S	0.693	0.93
442_E	508_R	0.693	0.93
32_Y	161_Q	0.692	0.93
144_Q	148_G	0.692	0.93
483_E	486_D	0.692	0.93
146_S	188_E	0.692	0.93
431_N	496_L	0.692	0.93
32_Y	163_L	0.691	0.93
443_V	446_Y	0.691	0.93
216_T	248_I	0.691	0.93
237_A	285_I	0.690	0.93
168_I	200_I	0.690	0.93
66_I	295_V	0.688	0.93
232_G	237_A	0.688	0.93
432_V	517_N	0.687	0.92
203_L	208_K	0.686	0.92
396_R	520_F	0.686	0.92
35_T	74_G	0.686	0.92
288_A	296_G	0.684	0.92
256_P	316_P	0.681	0.92
44_G	100_D	0.681	0.92
393_Q	433_V	0.678	0.92
498_F	503_G	0.678	0.92
163_L	302_F	0.677	0.92
241_P	283_I	0.675	0.92
386_G	409_I	0.675	0.92
427_Q	526_L	0.675	0.92
164_K	210_D	0.673	0.92
150_R	199_V	0.672	0.92
140_A	154_P	0.671	0.92
82_G	113_A	0.671	0.92
449_A	452_Q	0.669	0.91
103_G	349_L	0.669	0.91
445_D	449_A	0.668	0.91
192_P	195_E	0.667	0.91
463_F	468_F	0.667	0.91
150_R	195_E	0.666	0.91
528_A	532_K	0.664	0.91
81_S	113_A	0.663	0.91
213_I	247_M	0.660	0.91
393_Q	427_Q	0.658	0.91
94_L	359_Q	0.658	0.91
402_A	464_A	0.657	0.91
423_V	530_I	0.657	0.91
60_K	342_N	0.657	0.91
140_A	196_A	0.655	0.91
43_H	84_D	0.653	0.90
193_A	240_L	0.652	0.90
350_S	353_Q	0.650	0.90
95_Q	99_P	0.650	0.90
220_H	234_V	0.648	0.90
81_S	112_M	0.646	0.90
43_H	217_H	0.645	0.90
56_L	349_L	0.645	0.90
178_I	252_H	0.642	0.90
461_P	499_N	0.642	0.90
470_A	475_L	0.640	0.90
165_I	211_I	0.639	0.89
394_M	400_D	0.638	0.89
203_L	207_E	0.637	0.89
164_K	208_K	0.636	0.89
168_I	245_L	0.636	0.89
348_L	351_P	0.630	0.89
444_I	473_G	0.629	0.89
367_T	413_I	0.629	0.89
344_Q	347_S	0.628	0.89
81_S	104_M	0.628	0.89
448_T	471_K	0.627	0.89
31_T	310_V	0.626	0.89
56_L	59_Q	0.624	0.88
419_S	422_N	0.622	0.88
404_M	496_L	0.622	0.88
35_T	75_G	0.621	0.88
78_L	165_I	0.620	0.88
67_R	110_D	0.619	0.88
66_I	73_E	0.616	0.88
496_L	499_N	0.615	0.88
431_N	497_N	0.614	0.88
449_A	459_A	0.613	0.87
196_A	240_L	0.613	0.87
394_M	465_N	0.611	0.87
43_H	287_Q	0.611	0.87
87_T	118_E	0.611	0.87
401_F	465_N	0.610	0.87
405_S	431_N	0.608	0.87
400_D	492_R	0.607	0.87
95_Q	355_K	0.607	0.87
443_V	493_M	0.605	0.87
85_I	109_Y	0.605	0.87
394_M	494_A	0.604	0.87
411_D	426_V	0.604	0.87
76_S	161_Q	0.604	0.87
355_K	358_A	0.604	0.87
520_F	525_V	0.603	0.87
116_N	120_D	0.603	0.87
364_I	527_K	0.602	0.87
114_I	126_L	0.602	0.87
438_M	446_Y	0.601	0.86
175_T	179_G	0.601	0.86
390_L	464_A	0.601	0.86
117_H	429_F	0.600	0.86
176_A	184_F	0.599	0.86
387_R	391_A	0.597	0.86
430_G	523_A	0.596	0.86
80_L	249_V	0.596	0.86
288_A	294_Y	0.596	0.86
406_G	462_Q	0.596	0.86
440_G	485_V	0.595	0.86
144_Q	149_E	0.593	0.86
200_I	241_P	0.591	0.86
34_I	211_I	0.591	0.86
114_I	137_L	0.590	0.85
485_V	491_Y	0.589	0.85
46_F	100_D	0.588	0.85
40_N	82_G	0.587	0.85
154_P	168_I	0.587	0.85
39_T	295_V	0.586	0.85
63_V	295_V	0.584	0.85
80_L	158_F	0.582	0.85
421_K	425_K	0.581	0.85
396_R	433_V	0.580	0.84
470_A	476_N	0.580	0.84
369_G	415_A	0.580	0.84
128_Q	132_W	0.579	0.84
366_E	534_S	0.579	0.84
249_V	296_G	0.579	0.84
124_T	128_Q	0.579	0.84
378_V	383_T	0.578	0.84
154_P	202_E	0.578	0.84
46_F	349_L	0.578	0.84
398_G	492_R	0.577	0.84
42_H	81_S	0.576	0.84
202_E	205_Q	0.575	0.84
42_H	85_I	0.574	0.84
201_Q	244_S	0.574	0.84
214_A	248_I	0.574	0.84
427_Q	522_D	0.574	0.84
109_Y	112_M	0.574	0.84
117_H	252_H	0.573	0.84
42_H	100_D	0.571	0.84
114_I	119_F	0.569	0.83
56_L	292_G	0.569	0.83
241_P	281_N	0.568	0.83
454_K	459_A	0.563	0.83
472_D	475_L	0.562	0.83
282_G	308_K	0.562	0.83
408_G	431_N	0.562	0.83
117_H	254_Q	0.561	0.82
38_H	250_G	0.559	0.82
393_Q	522_D	0.559	0.82
119_F	126_L	0.558	0.82
444_I	448_T	0.557	0.82
204_Q	246_A	0.556	0.82
389_I	426_V	0.556	0.82
459_A	462_Q	0.555	0.82
458_G	461_P	0.553	0.82
126_L	142_I	0.553	0.82
42_H	104_M	0.552	0.81
120_D	175_T	0.552	0.81
35_T	73_E	0.552	0.81
82_G	251_G	0.552	0.81
36_V	300_F	0.551	0.81
220_H	250_G	0.551	0.81
67_R	107_V	0.550	0.81
247_M	309_M	0.550	0.81
169_G	215_A	0.549	0.81
343_Q	346_I	0.549	0.81
143_Y	147_T	0.546	0.81
63_V	107_V	0.546	0.81
64_D	67_R	0.546	0.81
382_Q	460_Y	0.545	0.81
38_H	286_V	0.544	0.81
43_H	291_W	0.543	0.80
150_R	198_L	0.542	0.80
372_E	384_N	0.540	0.80
403_V	461_P	0.540	0.80
455_P	459_A	0.540	0.80
220_H	287_Q	0.539	0.80
404_M	522_D	0.539	0.80
143_Y	146_S	0.538	0.80
448_T	473_G	0.537	0.80
113_A	215_A	0.533	0.79
47_W	91_E	0.532	0.79
479_K	482_G	0.532	0.79
39_T	42_H	0.531	0.79
117_H	431_N	0.530	0.79
210_D	244_S	0.530	0.79
192_P	218_M	0.529	0.79
195_E	201_Q	0.529	0.79
438_M	509_L	0.529	0.79
487_P	490_T	0.528	0.79
388_L	530_I	0.528	0.79
477_D	484_P	0.527	0.78
84_D	115_G	0.527	0.78
389_I	404_M	0.527	0.78
42_H	109_Y	0.527	0.78
217_H	251_G	0.527	0.78
82_G	288_A	0.526	0.78
82_G	215_A	0.525	0.78
400_D	481_K	0.525	0.78
250_G	253_S	0.525	0.78
119_F	142_I	0.525	0.78
172_T	175_T	0.524	0.78
433_V	525_V	0.524	0.78
196_A	203_L	0.524	0.78
371_L	413_I	0.523	0.78
386_G	390_L	0.523	0.78
302_F	307_M	0.523	0.78
43_H	87_T	0.522	0.78
459_A	464_A	0.522	0.78
403_V	446_Y	0.521	0.78
355_K	359_Q	0.521	0.78
28_Q	31_T	0.519	0.77
67_R	77_V	0.518	0.77
140_A	199_V	0.518	0.77
373_G	384_N	0.517	0.77
443_V	463_F	0.515	0.77
31_T	303_R	0.515	0.77
468_F	477_D	0.514	0.77
166_A	208_K	0.513	0.77
405_S	499_N	0.513	0.77
220_H	255_D	0.511	0.76
364_I	530_I	0.509	0.76
113_A	171_T	0.509	0.76
391_A	394_M	0.509	0.76
392_A	526_L	0.506	0.76
360_L	421_K	0.504	0.75
167_V	213_I	0.504	0.75
408_G	496_L	0.504	0.75
48_R	58_A	0.503	0.75
385_M	413_I	0.503	0.75
197_K	240_L	0.503	0.75
139_S	150_R	0.503	0.75
413_I	426_V	0.503	0.75
164_K	207_E	0.502	0.75
354_N	357_K	0.502	0.75
172_T	287_Q	0.500	0.75
390_L	393_Q	0.500	0.75

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2z1aA	1	0.8764	100	0.245	Contact Map
1hp1A	1	0.9327	100	0.249	Contact Map
4h2gA	2	0.8727	100	0.263	Contact Map
3ztvA	2	0.9109	100	0.268	Contact Map
3iveA	1	0.8582	100	0.269	Contact Map
4q7fA	1	0.8491	100	0.292	Contact Map
2wdcA	1	0.8455	100	0.313	Contact Map
3c9fA	2	0.8636	100	0.452	Contact Map
3gveA	2	0.5545	100	0.571	Contact Map
3jyfA	2	0.5655	100	0.576	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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