GREMLIN Database
PNTA - NAD(P) transhydrogenase subunit alpha
UniProt: P07001 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
EcoGene: EG10744
Length: 510 (508)
Sequences: 892 (453)
Seq/√Len: 20.1

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
93_I112_V7.8761.00
142_I253_V5.6511.00
269_R293_E5.4911.00
262_P265_K5.2221.00
23_V55_A4.8851.00
92_F129_A4.2931.00
115_M327_Y4.2691.00
235_I238_E4.1461.00
296_V299_E4.0301.00
294_Y309_V4.0071.00
269_R273_D3.9971.00
300_I308_K3.9321.00
117_S368_W3.8111.00
350_F367_T3.7911.00
246_A252_I3.5741.00
148_E300_I3.3671.00
85_P109_N3.3391.00
71_K79_E3.3101.00
232_D236_K3.2751.00
300_I310_I3.2611.00
70_L335_L3.2601.00
236_K240_E3.0280.99
70_L331_L2.8580.99
272_V292_C2.8560.99
243_A274_S2.8550.99
237_A240_E2.8330.99
338_L355_I2.8310.99
148_E310_I2.7890.99
129_A327_Y2.7860.99
48_K51_V2.7720.99
235_I239_M2.7660.99
296_V301_F2.6950.98
212_L241_L2.6910.98
245_Q249_V2.6880.98
111_T348_V2.6650.98
202_E209_A2.5980.98
14_T317_G2.5690.98
257_L263_A2.5020.97
59_E62_S2.4590.97
9_R76_L2.4330.97
169_M212_L2.4190.97
490_S494_F2.3880.96
167_K248_E2.3480.96
31_F339_C2.3130.96
103_Q106_A2.2230.95
37_S57_I2.2200.95
235_I242_F2.2010.94
99_P103_Q2.1690.94
77_D104_K2.1670.94
22_T328_G2.1180.93
252_I267_I2.0270.91
6_P64_W1.9940.91
18_A22_T1.9860.91
272_V281_I1.9860.91
103_Q107_E1.9570.90
167_K249_V1.9340.89
63_V69_I1.9280.89
48_K52_Q1.8920.88
32_T56_E1.8800.88
115_M129_A1.8450.87
238_E242_F1.8450.87
232_D235_I1.8120.86
501_Q505_K1.7960.86
73_N287_Q1.7950.85
58_V63_V1.7480.84
268_T271_M1.7450.84
415_W419_V1.7320.83
273_D294_Y1.7260.83
5_I18_A1.7240.83
167_K245_Q1.7100.83
281_I309_V1.7000.82
126_S333_N1.6910.82
472_I479_S1.6900.82
84_N87_T1.6880.82
436_V440_Y1.6860.82
13_E73_N1.6840.82
243_A271_M1.6550.80
192_R245_Q1.6490.80
196_T238_E1.6460.80
243_A270_E1.6460.80
350_F362_R1.6390.80
202_E205_Q1.6300.79
8_E13_E1.6280.79
121_I124_A1.6180.79
271_M274_S1.6160.79
273_D305_N1.6090.78
230_M238_E1.6040.78
362_R365_E1.5960.78
464_I489_A1.5900.78
182_G207_M1.5860.77
281_I292_C1.5710.77
6_P209_A1.5660.76
427_H464_I1.5600.76
427_H430_V1.5510.76
300_I312_Y1.5460.75
68_I281_I1.5400.75
238_E241_L1.5340.75
38_G47_D1.5290.75
169_M249_V1.5160.74
462_G489_A1.5100.74
265_K293_E1.5090.74
405_L409_A1.5080.74
69_I87_T1.5080.74
72_V327_Y1.4970.73
212_L249_V1.4970.73
201_K213_E1.4930.73
179_A183_A1.4910.73
439_Y442_V1.4820.72
424_F431_F1.4720.72
325_Q328_G1.4650.71
239_M242_F1.4570.71
205_Q213_E1.4560.71
143_V187_L1.4490.71
425_L431_F1.4490.71
136_I152_F1.4480.70
214_L234_F1.4430.70
265_K268_T1.4350.70
437_V488_I1.4230.69
194_F234_F1.4090.68
194_F238_E1.4070.68
333_N337_L1.3860.67
389_V392_E1.3430.65
212_L245_Q1.3370.64
148_E308_K1.3350.64
192_R249_V1.3280.64
63_V66_S1.3120.63
126_S337_L1.3100.63
2_R66_S1.3040.62
292_C309_V1.2930.61
216_F229_V1.2920.61
257_L288_N1.2870.61
500_T504_L1.2810.61
61_N69_I1.2790.61
249_V252_I1.2620.60
267_I271_M1.2600.59
61_N82_L1.2600.59
245_Q248_E1.2570.59
472_I486_V1.2310.58
109_N361_I1.2290.57
430_V451_T1.2210.57
173_A427_H1.2170.57
443_W446_S1.2100.56
3_I68_I1.2090.56
333_N336_K1.2070.56
136_I323_S1.2070.56
78_D81_A1.1990.56
202_E211_F1.1980.55
67_E84_N1.1960.55
33_V320_P1.1960.55
416_M419_V1.1930.55
199_E359_T1.1910.55
87_T110_V1.1890.55
90_V335_L1.1890.55
21_K25_Q1.1860.55
424_F428_F1.1840.55
157_I182_G1.1780.54
122_S170_V1.1770.54
169_M238_E1.1740.54
51_V56_E1.1720.54
96_A114_A1.1720.54
20_P45_F1.1670.53
230_M241_L1.1670.53
194_F242_F1.1650.53
416_M432_A1.1630.53
118_V127_L1.1630.53
192_R248_E1.1610.53
235_I241_L1.1510.52
234_F239_M1.1450.52
127_L358_V1.1440.52
126_S440_Y1.1440.52
109_N366_I1.1440.52
273_D304_E1.1400.52
169_M242_F1.1400.52
488_I491_I1.1290.51
204_V284_L1.1210.51
190_I210_E1.1130.50
118_V354_V1.1110.50
46_D49_A1.1100.50
423_E431_F1.1090.50
72_V129_A1.1080.50
6_P9_R1.1030.49
435_C439_Y1.0960.49
241_L245_Q1.0960.49
243_A268_T1.0930.49
480_F484_I1.0920.49
57_I63_V1.0910.49
357_G373_I1.0830.48
94_W97_Q1.0820.48
232_D240_E1.0790.48
196_T239_M1.0750.48
110_V361_I1.0740.47
417_A425_L1.0730.47
212_L238_E1.0660.47
194_F235_I1.0650.47
269_R305_N1.0640.47
10_L73_N1.0640.47
233_A493_I1.0610.47
404_A408_L1.0590.46
22_T325_Q1.0570.46
276_K448_A1.0550.46
395_C398_S1.0490.46
90_V484_I1.0480.46
171_I292_C1.0470.46
129_A323_S1.0470.46
171_I239_M1.0370.45
214_L239_M1.0370.45
196_T235_I1.0370.45
470_L479_S1.0360.45
332_V336_K1.0360.45
476_G480_F1.0340.45
341_E347_T1.0310.45
320_P376_S1.0280.44
423_E427_H1.0230.44
468_A482_S1.0210.44
37_S47_D1.0170.44
149_F156_Q1.0160.44
169_M235_I1.0150.44
207_M434_A1.0120.43
230_M235_I1.0110.43
106_A366_I1.0090.43
85_P108_R1.0080.43
246_A266_L1.0070.43
83_L110_V1.0040.43
152_F163_V1.0010.43
104_K107_E1.0000.43
263_A288_N0.9990.43
7_R36_E0.9970.43
485_A489_A0.9960.42
150_G154_T0.9920.42
126_S332_V0.9840.42
135_N326_L0.9840.42
143_V310_I0.9790.41
15_R152_F0.9770.41
118_V334_L0.9700.41
113_M359_T0.9700.41
194_F239_M0.9670.41
462_G488_I0.9630.40
91_S114_A0.9570.40
97_Q102_M0.9560.40
216_F233_A0.9560.40
149_F251_I0.9560.40
132_S259_P0.9560.40
184_A191_V0.9550.40
505_K508_R0.9450.39
92_F443_W0.9410.39
224_D287_Q0.9360.39
81_A108_R0.9340.39
194_F216_F0.9340.39
31_F346_I0.9300.38
205_Q211_F0.9290.38
437_V498_T0.9290.38
106_A361_I0.9280.38
382_A388_E0.9270.38
455_S500_T0.9260.38
58_V62_S0.9190.38
361_I366_I0.9190.38
498_T501_Q0.9170.38
163_V179_A0.9150.37
427_H442_V0.9140.37
464_I471_Q0.9140.37
56_E394_K0.9130.37
126_S436_V0.9130.37
479_S483_F0.9100.37
68_I300_I0.9090.37
92_F327_Y0.9050.37
443_W456_V0.9030.37
209_A213_E0.9000.36
5_I488_I0.8980.36
312_Y318_R0.8970.36
410_I431_F0.8960.36
204_V494_F0.8950.36
292_C295_T0.8940.36
113_M348_V0.8940.36
167_K190_I0.8930.36
270_E273_D0.8930.36
127_L509_K0.8920.36
240_E244_A0.8870.36
153_F182_G0.8860.36
349_D365_E0.8860.36
412_L416_M0.8850.36
2_R372_P0.8840.36
200_V427_H0.8830.35
388_E392_E0.8830.35
425_L444_N0.8820.35
129_A443_W0.8750.35
490_S493_I0.8750.35
395_C399_P0.8740.35
5_I36_E0.8740.35
287_Q317_G0.8740.35
431_F434_A0.8720.35
478_V481_L0.8720.35
41_Q48_K0.8700.35
403_Y464_I0.8670.35
112_V361_I0.8650.34
481_L488_I0.8640.34
57_I501_Q0.8630.34
234_F237_A0.8630.34
223_G355_I0.8620.34
149_F154_T0.8590.34
439_Y443_W0.8560.34
356_R371_P0.8480.33
447_H466_V0.8460.33
432_A436_V0.8460.33
231_S234_F0.8440.33
146_A153_F0.8410.33
332_V337_L0.8410.33
140_R144_E0.8400.33
13_E79_E0.8390.33
97_Q129_A0.8380.33
69_I299_E0.8370.33
66_S100_E0.8330.33
52_Q384_K0.8290.32
121_I354_V0.8290.32
14_T42_L0.8280.32
34_A58_V0.8270.32
219_E490_S0.8260.32
259_P266_L0.8250.32
33_V319_L0.8250.32
55_A320_P0.8240.32
194_F233_A0.8240.32
413_F425_L0.8240.32
320_P436_V0.8240.32
69_I108_R0.8240.32
502_R506_M0.8240.32
243_A247_K0.8190.32
88_T111_T0.8180.32
462_G490_S0.8170.32
55_A87_T0.8160.32
389_V394_K0.8150.32
57_I478_V0.8150.32
69_I111_T0.8140.31
482_S486_V0.8120.31
65_Q69_I0.8080.31
426_G431_F0.8060.31
253_V383_Q0.8010.31
15_R234_F0.8010.31
224_D337_L0.7980.31
136_I331_L0.7970.31
382_A386_A0.7970.31
200_V368_W0.7940.30
58_V434_A0.7880.30
455_S504_L0.7870.30
474_Q479_S0.7850.30
209_A284_L0.7830.30
437_V447_H0.7820.30
204_V211_F0.7810.30
152_F169_M0.7800.30
214_L231_S0.7790.30
2_R32_T0.7780.29
430_V442_V0.7780.29
236_K244_A0.7760.29
171_I242_F0.7760.29
475_G490_S0.7750.29
18_A23_V0.7750.29
94_W129_A0.7740.29
407_A480_F0.7740.29
82_L323_S0.7720.29
183_A419_V0.7710.29
93_I114_A0.7700.29
52_Q385_A0.7700.29
111_T268_T0.7660.29
66_S116_D0.7640.29
223_G229_V0.7640.29
241_L249_V0.7630.29
212_L235_I0.7620.29
112_V431_F0.7620.29
71_K80_I0.7600.29
488_I498_T0.7600.29
473_G479_S0.7590.28
137_A434_A0.7580.28
333_N436_V0.7560.28
482_S490_S0.7540.28
171_I194_F0.7530.28
173_A486_V0.7520.28
366_I477_W0.7510.28
401_R404_A0.7510.28
8_E15_R0.7490.28
137_A257_L0.7480.28
337_L451_T0.7470.28
64_W111_T0.7470.28
199_E339_C0.7460.28
96_A200_V0.7460.28
49_A52_Q0.7460.28
246_A249_V0.7460.28
429_T485_A0.7440.28
387_P391_T0.7430.28
350_F353_V0.7430.28
376_S379_P0.7430.28
338_L346_I0.7420.28
426_G479_S0.7420.28
222_S315_L0.7420.28
386_A389_V0.7410.28
15_R169_M0.7400.27
412_L415_W0.7400.27
117_S442_V0.7390.27
447_H501_Q0.7390.27
43_A304_E0.7380.27
131_S135_N0.7370.27
33_V55_A0.7360.27
198_P221_G0.7330.27
117_S204_V0.7310.27
51_V58_V0.7300.27
224_D373_I0.7280.27
431_F444_N0.7280.27
413_F417_A0.7260.27
273_D293_E0.7260.27
424_F444_N0.7260.27
401_R416_M0.7250.27
428_F441_V0.7250.27
140_R179_A0.7240.27
414_G417_A0.7230.27
63_V319_L0.7230.27
243_A265_K0.7220.27
140_R300_I0.7210.27
337_L354_V0.7210.27
66_S405_L0.7200.26
271_M431_F0.7180.26
171_I241_L0.7180.26
339_C346_I0.7150.26
451_T464_I0.7120.26
273_D297_P0.7110.26
463_I491_I0.7110.26
376_S494_F0.7110.26
171_I298_G0.7090.26
444_N464_I0.7080.26
441_V464_I0.7080.26
357_G368_W0.7080.26
171_I235_I0.7070.26
81_A477_W0.7070.26
341_E345_N0.7070.26
207_M455_S0.7060.26
66_S281_I0.7030.26
231_S237_A0.7010.26
171_I196_T0.6980.25
465_V489_A0.6980.25
45_F350_F0.6970.25
92_F323_S0.6960.25
104_K108_R0.6960.25
183_A228_K0.6960.25
270_E293_E0.6950.25
427_H437_V0.6940.25
36_E85_P0.6930.25
230_M234_F0.6920.25
296_V304_E0.6920.25
297_P301_F0.6920.25
94_W112_V0.6910.25
167_K192_R0.6890.25
476_G479_S0.6880.25
3_I8_E0.6870.25
431_F509_K0.6860.25
89_L252_I0.6860.25
59_E82_L0.6850.25
3_I276_K0.6850.25
356_R369_P0.6850.25
4_G8_E0.6840.25
179_A372_P0.6830.25
6_P79_E0.6820.25
404_A477_W0.6790.24
13_E72_V0.6790.24
383_Q390_K0.6750.24
37_S51_V0.6750.24
474_Q483_F0.6750.24
15_R92_F0.6750.24
15_R212_L0.6750.24
234_F242_F0.6740.24
194_F284_L0.6740.24
90_V137_A0.6740.24
281_I294_Y0.6730.24
4_G314_D0.6730.24
196_T443_W0.6710.24
77_D80_I0.6710.24
92_F424_F0.6700.24
191_V241_L0.6700.24
59_E66_S0.6690.24
5_I270_E0.6680.24
21_K90_V0.6680.24
56_E385_A0.6680.24
23_V442_V0.6680.24
21_K24_E0.6670.24
115_M118_V0.6660.24
173_A464_I0.6660.24
229_V232_D0.6640.24
421_P463_I0.6640.24
409_A426_G0.6640.24
124_A502_R0.6620.24
403_Y465_V0.6620.24
414_G488_I0.6610.24
472_I487_L0.6610.24
137_A401_R0.6610.24
219_E229_V0.6590.23
370_A442_V0.6580.23
15_R134_A0.6560.23
406_M416_M0.6550.23
102_M365_E0.6540.23
423_E444_N0.6540.23
60_G401_R0.6530.23
224_D440_Y0.6520.23
96_A102_M0.6510.23
348_V355_I0.6500.23
397_C401_R0.6490.23
24_E57_I0.6480.23
116_D328_G0.6480.23
136_I154_T0.6470.23
69_I398_S0.6460.23
334_L509_K0.6450.23
362_R465_V0.6440.23
465_V471_Q0.6440.23
127_L451_T0.6440.23
482_S494_F0.6420.23
234_F292_C0.6420.23
92_F292_C0.6420.23
410_I464_I0.6400.23
440_Y498_T0.6400.23
220_A417_A0.6390.23
207_M300_I0.6380.23
183_A329_T0.6380.23
301_F304_E0.6370.22
73_N224_D0.6370.22
113_M334_L0.6360.22
68_I78_D0.6360.22
218_E233_A0.6350.22
207_M211_F0.6350.22
402_K437_V0.6330.22
2_R14_T0.6330.22
154_T251_I0.6320.22
169_M252_I0.6300.22
437_V443_W0.6300.22
468_A483_F0.6290.22
102_M355_I0.6280.22
431_F479_S0.6280.22
132_S266_L0.6270.22
240_E366_I0.6260.22
298_G314_D0.6260.22
15_R20_P0.6260.22
469_L480_F0.6260.22
451_T463_I0.6250.22
414_G424_F0.6240.22
199_E343_D0.6230.22
469_L472_I0.6230.22
77_D240_E0.6220.22
152_F249_V0.6210.22
187_L509_K0.6210.22
232_D509_K0.6200.22
435_C471_Q0.6190.22
444_N451_T0.6190.22
31_F94_W0.6190.22
58_V321_T0.6170.22
68_I335_L0.6160.22
69_I83_L0.6160.22
6_P240_E0.6150.21
196_T229_V0.6150.21
93_I105_L0.6140.21
294_Y489_A0.6110.21
305_N309_V0.6100.21
425_L479_S0.6100.21
230_M258_I0.6100.21
98_N276_K0.6090.21
57_I82_L0.6090.21
149_F318_R0.6080.21
18_A33_V0.6080.21
219_E482_S0.6080.21
70_L179_A0.6070.21
29_L336_K0.6070.21
21_K374_Q0.6060.21
287_Q358_V0.6060.21
214_L218_E0.6060.21
92_F115_M0.6050.21
25_Q448_A0.6050.21
196_T237_A0.6040.21
281_I354_V0.6040.21
375_V466_V0.6040.21
28_K115_M0.6040.21
349_D355_I0.6020.21
396_T399_P0.6020.21
437_V446_S0.6020.21
130_L134_A0.6010.21
8_E17_A0.6000.21
494_F508_R0.5990.21
423_E442_V0.5990.21
247_K271_M0.5980.21
137_A198_P0.5970.21
304_E468_A0.5970.21
463_I470_L0.5960.21
228_K491_I0.5960.21
72_V92_F0.5950.21
340_K344_G0.5950.21
464_I499_V0.5950.21
90_V253_V0.5940.21
94_W288_N0.5940.21
58_V181_I0.5920.21
7_R262_P0.5920.21
111_T323_S0.5910.20
234_F248_E0.5910.20
309_V441_V0.5910.20
191_V282_V0.5900.20
277_A428_F0.5890.20
196_T242_F0.5880.20
71_K101_L0.5870.20
475_G483_F0.5860.20
477_W485_A0.5860.20
48_K493_I0.5840.20
265_K297_P0.5840.20
395_C448_A0.5840.20
149_F163_V0.5840.20
409_A479_S0.5830.20
273_D296_V0.5830.20
224_D333_N0.5820.20
27_L484_I0.5790.20
122_S323_S0.5790.20
284_L435_C0.5780.20
5_I409_A0.5780.20
79_E428_F0.5780.20
444_N484_I0.5770.20
425_L464_I0.5770.20
420_A473_G0.5750.20
150_G162_K0.5750.20
199_E468_A0.5740.20
403_Y482_S0.5740.20
2_R214_L0.5740.20
448_A509_K0.5740.20
15_R248_E0.5740.20
384_K387_P0.5720.20
407_A411_I0.5720.20
17_A384_K0.5710.20
15_R323_S0.5710.20
27_L55_A0.5710.20
45_F320_P0.5700.20
73_N333_N0.5700.20
451_T471_Q0.5700.20
437_V474_Q0.5680.20
372_P377_A0.5680.20
65_Q78_D0.5680.20
89_L112_V0.5680.20
232_D333_N0.5670.19
385_A389_V0.5670.19
300_I439_Y0.5660.19
212_L252_I0.5650.19
3_I153_F0.5630.19
420_A435_C0.5630.19
80_I101_L0.5620.19
475_G505_K0.5620.19
333_N440_Y0.5620.19
167_K232_D0.5620.19
249_V268_T0.5610.19
396_T442_V0.5600.19
52_Q323_S0.5600.19
118_V136_I0.5590.19
429_T439_Y0.5580.19
272_V309_V0.5570.19
210_E230_M0.5550.19
440_Y490_S0.5530.19
146_A154_T0.5520.19
266_L322_Q0.5510.19
201_K222_S0.5510.19
423_E509_K0.5510.19
470_L478_V0.5510.19
234_F238_E0.5500.19
462_G487_L0.5500.19
404_A475_G0.5500.19
224_D375_V0.5490.19
18_A87_T0.5490.19
353_V374_Q0.5490.19
56_E401_R0.5480.19
424_F443_W0.5470.19
73_N417_A0.5470.19
104_K387_P0.5470.19
114_A338_L0.5470.19
233_A333_N0.5460.19
34_A56_E0.5460.19
7_R72_V0.5440.19
157_I322_Q0.5440.19
415_W493_I0.5430.19
192_R210_E0.5430.19
196_T212_L0.5430.19
130_L285_A0.5400.18
196_T455_S0.5390.18
70_L357_G0.5390.18
173_A441_V0.5390.18
202_E488_I0.5380.18
245_Q252_I0.5380.18
325_Q329_T0.5370.18
428_F509_K0.5360.18
478_V498_T0.5350.18
483_F490_S0.5350.18
22_T332_V0.5350.18
196_T252_I0.5340.18
198_P274_S0.5330.18
395_C403_Y0.5310.18
427_H444_N0.5310.18
96_A100_E0.5310.18
420_A428_F0.5310.18
68_I317_G0.5300.18
241_L298_G0.5280.18
421_P436_V0.5270.18
2_R509_K0.5260.18
152_F234_F0.5260.18
21_K204_V0.5250.18
149_F192_R0.5250.18
133_M136_I0.5240.18
463_I478_V0.5240.18
143_V193_A0.5230.18
417_A431_F0.5230.18
477_W480_F0.5230.18
165_P360_V0.5230.18
2_R224_D0.5220.18
14_T447_H0.5220.18
21_K53_A0.5220.18
157_I239_M0.5220.18
423_E465_V0.5210.18
179_A314_D0.5200.18
37_S59_E0.5200.18
88_T147_H0.5200.18
36_E170_V0.5190.18
10_L442_V0.5180.18
406_M429_T0.5180.18
55_A442_V0.5170.18
86_G434_A0.5170.18
52_Q386_A0.5170.18
436_V463_I0.5160.17
34_A66_S0.5160.17
16_V50_F0.5160.17
36_E418_S0.5150.17
97_Q101_L0.5150.17
192_R212_L0.5150.17
7_R229_V0.5140.17
102_M231_S0.5140.17
72_V317_G0.5140.17
124_A206_S0.5140.17
393_E396_T0.5140.17
171_I294_Y0.5130.17
70_L413_F0.5120.17
133_M360_V0.5120.17
374_Q491_I0.5120.17
111_T116_D0.5110.17
435_C451_T0.5110.17
428_F431_F0.5100.17
36_E103_Q0.5100.17
21_K151_R0.5090.17
191_V212_L0.5080.17
381_A475_G0.5080.17
419_V472_I0.5070.17
126_S319_L0.5060.17
194_F213_E0.5060.17
218_E231_S0.5060.17
113_M157_I0.5060.17
234_F258_I0.5060.17
66_S87_T0.5060.17
455_S502_R0.5050.17
14_T287_Q0.5050.17
68_I366_I0.5050.17
427_H505_K0.5040.17
246_A271_M0.5040.17
65_Q71_K0.5040.17
309_V489_A0.5040.17
43_A58_V0.5030.17
287_Q417_A0.5030.17
126_S224_D0.5030.17
122_S344_G0.5010.17
390_K408_L0.5010.17
423_E479_S0.5010.17
320_P373_I0.5010.17
437_V480_F0.5000.17
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
2qrjA 1 0.6118 100 0.605 Contact Map
1x13A 2 0.7255 100 0.618 Contact Map
3p2yA 2 0.6706 100 0.686 Contact Map
4dioA 2 0.6843 100 0.711 Contact Map
1l7dA 2 0.6922 100 0.738 Contact Map
4izhA 2 0.7137 100 0.761 Contact Map
2eezA 5 0.6647 100 0.779 Contact Map
1pjcA 5 0.6922 100 0.795 Contact Map
4lmpA 5 0.7098 100 0.803 Contact Map
4o93A 2 0.1784 100 0.818 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0138 seconds.