GREMLIN Database
RECN - DNA repair protein RecN
UniProt: P05824 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
EcoGene: EG10831
Length: 553 (517)
Sequences: 5395 (4484)
Seq/√Len: 197.2

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
213_E297_R5.5961.00
522_N525_A3.6171.00
186_R332_E3.3961.00
177_Q347_A3.1701.00
465_I473_V3.0971.00
519_Q525_A3.0681.00
64_L68_F3.0591.00
318_S321_A3.0191.00
8_S15_E3.0061.00
365_H369_Q3.0021.00
198_N330_L2.7731.00
242_L249_A2.6361.00
326_Y330_L2.6211.00
354_H358_L2.5841.00
297_R300_E2.5801.00
198_N326_Y2.5541.00
64_L70_L2.4731.00
195_K199_E2.4671.00
169_S350_V2.4251.00
4_Q17_E2.4121.00
242_L246_L2.3931.00
194_L326_Y2.3631.00
272_E276_Q2.3481.00
345_T349_A2.3231.00
466_S533_L2.3071.00
165_L349_A2.2121.00
249_A253_V2.1831.00
365_H409_A2.1741.00
4_Q19_D2.1451.00
397_V410_D2.1431.00
357_A404_L2.1311.00
191_Q195_K2.1281.00
191_Q337_D2.0861.00
6_T15_E2.0741.00
347_A351_T2.0711.00
506_S519_Q2.0611.00
45_C78_R2.0391.00
393_F414_F2.0371.00
210_I301_L2.0201.00
64_L67_R2.0151.00
187_A191_Q2.0141.00
200_F307_K1.9921.00
170_C350_V1.9731.00
6_T17_E1.9701.00
169_S353_H1.9391.00
175_H179_L1.9351.00
317_V321_A1.9331.00
246_L253_V1.9181.00
204_P320_E1.9071.00
206_E304_R1.9021.00
155_L367_Q1.9011.00
324_Q327_Q1.8981.00
26_V499_G1.8811.00
170_C174_A1.8701.00
246_L249_A1.8531.00
328_S332_E1.8451.00
64_L80_L1.8431.00
327_Q331_E1.8391.00
203_Q209_Q1.8201.00
351_T354_H1.8191.00
374_E378_L1.8151.00
150_A371_Y1.8071.00
187_A333_Q1.8051.00
64_L69_S1.7971.00
508_E517_H1.7951.00
396_D415_R1.7951.00
174_A178_Q1.7931.00
162_R353_H1.7921.00
166_W350_V1.7781.00
324_Q328_S1.7411.00
348_L352_K1.7311.00
169_S172_D1.7261.00
349_A353_H1.6981.00
168_Q172_D1.6951.00
331_E335_Q1.6781.00
269_M276_Q1.6701.00
65_C68_F1.6691.00
152_E367_Q1.6691.00
26_V502_H1.6641.00
342_S345_T1.6601.00
21_H520_S1.6581.00
209_Q213_E1.6571.00
273_A280_A1.6511.00
173_L350_V1.6461.00
246_L252_L1.6401.00
80_L85_L1.6351.00
162_R360_I1.6221.00
470_A492_L1.6001.00
243_Q246_L1.5881.00
3_A81_E1.5821.00
504_F521_L1.5791.00
296_N299_F1.5741.00
159_M357_A1.5651.00
169_S173_L1.5621.00
174_A177_Q1.5561.00
398_K411_R1.5531.00
529_E532_R1.5481.00
63_D70_L1.5371.00
376_A395_I1.5311.00
207_F312_A1.5261.00
63_D66_A1.5221.00
317_V322_L1.5211.00
327_Q330_L1.5201.00
61_R64_L1.5201.00
43_G48_G1.5181.00
268_D272_E1.5181.00
107_I120_L1.5151.00
273_A277_I1.5141.00
344_E347_A1.5061.00
172_D342_S1.5051.00
156_L160_T1.5041.00
264_S268_D1.4961.00
378_L449_R1.4941.00
241_N246_L1.4871.00
202_P308_Q1.4821.00
422_Q513_M1.4821.00
349_A352_K1.4751.00
161_A165_L1.4731.00
360_I363_A1.4611.00
171_R175_H1.4531.00
62_A70_L1.4471.00
245_Q249_A1.4421.00
3_A90_E1.4301.00
338_D341_D1.4211.00
167_H170_C1.4201.00
165_L168_Q1.4051.00
395_I414_F1.4031.00
241_N244_S1.4031.00
4_Q79_W1.3971.00
66_A70_L1.3921.00
269_M279_E1.3841.00
418_T430_V1.3811.00
78_R82_E1.3771.00
62_A68_F1.3771.00
182_E186_R1.3751.00
524_K528_Q1.3731.00
68_F80_L1.3711.00
143_K407_D1.3671.00
358_L409_A1.3671.00
350_V354_H1.3641.00
358_L362_R1.3641.00
297_R301_L1.3621.00
190_L194_L1.3611.00
504_F519_Q1.3561.00
214_Y301_L1.3521.00
18_I518_M1.3491.00
205_G208_E1.3471.00
303_Q307_K1.3471.00
376_A394_T1.3441.00
248_T253_V1.3381.00
433_G460_E1.3341.00
173_L347_A1.3321.00
378_L381_D1.3151.00
178_Q182_E1.3111.00
356_Q360_I1.3111.00
66_A69_S1.3061.00
260_D287_Y1.3041.00
261_S264_S1.3001.00
194_L333_Q1.2991.00
165_L353_H1.2991.00
116_Q119_E1.2981.00
321_A324_Q1.2971.00
169_S349_A1.2911.00
356_Q359_E1.2811.00
165_L356_Q1.2771.00
355_Q359_E1.2751.00
77_L80_L1.2721.00
501_Q520_S1.2701.00
107_I112_V1.2651.00
359_E363_A1.2611.00
373_E376_A1.2561.00
139_P413_E1.2551.00
270_L280_A1.2531.00
330_L334_Q1.2531.00
42_L457_I1.2521.00
205_G209_Q1.2501.00
207_F211_D1.2501.00
362_R366_Q1.2501.00
158_E360_I1.2451.00
474_G498_C1.2421.00
209_Q212_E1.2391.00
158_E363_A1.2371.00
158_E162_R1.2341.00
155_L158_E1.2331.00
188_E192_Y1.2301.00
11_A37_I1.2241.00
382_S476_L1.2211.00
478_R500_H1.2191.00
158_E161_A1.2171.00
141_H144_F1.2111.00
379_I443_I1.2101.00
245_Q253_V1.2101.00
65_C70_L1.2091.00
471_A475_K1.2081.00
210_I214_Y1.2051.00
10_F41_A1.2051.00
155_L363_A1.2021.00
214_Y218_A1.1941.00
433_G464_G1.1921.00
70_L76_A1.1911.00
420_P509_T1.1911.00
299_F303_Q1.1881.00
223_L227_S1.1851.00
205_G320_E1.1841.00
244_S247_Y1.1791.00
61_R65_C1.1781.00
214_Y302_E1.1771.00
319_P322_L1.1761.00
173_L177_Q1.1751.00
105_G112_V1.1731.00
376_A380_T1.1711.00
61_R68_F1.1701.00
64_L82_E1.1651.00
173_L343_Q1.1641.00
157_Q161_A1.1621.00
325_Y328_S1.1591.00
82_E86_E1.1591.00
162_R165_L1.1581.00
159_M364_L1.1581.00
373_E377_Q1.1541.00
245_Q252_L1.1501.00
32_G435_E1.1491.00
182_E185_A1.1491.00
370_Q374_E1.1481.00
14_R515_E1.1471.00
213_E216_R1.1401.00
189_L193_Q1.1381.00
172_D175_H1.1321.00
83_N86_E1.1301.00
197_L322_L1.1291.00
68_F82_E1.1271.00
185_A188_E1.1251.00
357_A361_A1.1191.00
509_T514_T1.1131.00
25_T503_Y1.1111.00
482_E500_H1.1051.00
351_T355_Q1.1021.00
226_T230_A1.0981.00
323_P326_Y1.0951.00
352_K356_Q1.0951.00
396_D413_E1.0931.00
63_D68_F1.0931.00
179_L182_E1.0901.00
194_L329_L1.0881.00
503_Y518_M1.0871.00
509_T512_A1.0861.00
225_T229_N1.0851.00
200_F311_L1.0841.00
130_Q433_G1.0811.00
162_R356_Q1.0791.00
143_K412_I1.0791.00
344_E348_L1.0761.00
347_A350_V1.0751.00
24_M488_C1.0701.00
222_Q225_T1.0681.00
242_L253_V1.0621.00
387_S469_T1.0571.00
449_R483_S1.0561.00
208_E212_E1.0561.00
155_L360_I1.0541.00
275_I279_E1.0481.00
266_V280_A1.0441.00
248_T252_L1.0431.00
370_Q377_Q1.0431.00
256_L263_L1.0401.00
138_K141_H1.0361.00
194_L330_L1.0341.00
77_L82_E1.0341.00
245_Q248_T1.0321.00
334_Q337_D1.0281.00
316_H322_L1.0281.00
397_V412_I1.0271.00
211_D215_K1.0261.00
244_S252_L1.0261.00
216_R260_D1.0221.00
241_N248_T1.0191.00
221_G225_T1.0151.00
82_E85_L1.0101.00
255_E258_G1.0021.00
361_A409_A1.0011.00
177_Q343_Q1.0001.00
165_L169_S1.0001.00
213_E301_L0.9991.00
62_A65_C0.9991.00
128_H440_A0.9981.00
261_S265_G0.9931.00
169_S346_L0.9911.00
94_R106_F0.9891.00
265_G268_D0.9881.00
166_W354_H0.9871.00
63_D80_L0.9841.00
247_Y250_K0.9821.00
251_Q254_S0.9810.99
275_I278_A0.9810.99
493_P533_L0.9800.99
164_Q168_Q0.9800.99
510_D515_E0.9720.99
503_Y520_S0.9710.99
139_P411_R0.9700.99
438_R465_I0.9690.99
479_Q482_E0.9680.99
241_N252_L0.9670.99
240_A245_Q0.9660.99
93_L121_G0.9630.99
325_Y329_L0.9630.99
250_K254_S0.9600.99
231_L235_A0.9590.99
79_W90_E0.9590.99
62_A66_A0.9560.99
241_N245_Q0.9540.99
170_C354_H0.9540.99
279_E283_E0.9520.99
394_T424_M0.9510.99
276_Q280_A0.9470.99
274_T278_A0.9470.99
243_Q253_V0.9440.99
181_Q185_A0.9420.99
377_Q381_D0.9420.99
159_M361_A0.9410.99
383_M391_G0.9390.99
460_E489_V0.9380.99
195_K198_N0.9370.99
366_Q369_Q0.9360.99
151_N154_S0.9360.99
340_A344_E0.9320.99
283_E286_H0.9230.99
480_L486_V0.9220.99
224_L228_Q0.9210.99
380_T384_H0.9200.99
328_S331_E0.9200.99
64_L78_R0.9150.99
348_L351_T0.9130.99
437_S464_G0.9130.99
186_R190_L0.9120.99
309_I312_A0.9090.99
10_F62_A0.9080.99
262_K265_G0.9070.99
76_A80_L0.9060.99
248_T251_Q0.9050.99
193_Q196_E0.9000.99
160_T164_Q0.8990.99
215_K218_A0.8980.99
220_S291_L0.8980.99
435_E460_E0.8970.99
226_T256_L0.8950.99
508_E515_E0.8920.99
68_F77_L0.8910.99
194_L198_N0.8910.99
243_Q248_T0.8900.99
70_L77_L0.8880.99
171_R174_A0.8840.99
7_I13_V0.8840.99
67_R70_L0.8820.99
44_L76_A0.8820.99
334_Q338_D0.8790.99
365_H410_D0.8790.99
471_A498_C0.8750.99
361_A404_L0.8750.99
202_P319_P0.8740.99
6_T77_L0.8740.99
167_H171_R0.8730.99
113_P116_Q0.8720.99
385_A476_L0.8700.99
468_P471_A0.8680.99
362_R409_A0.8670.99
128_H131_H0.8660.99
240_A246_L0.8640.99
285_R289_D0.8620.99
321_A325_Y0.8620.99
332_E335_Q0.8620.99
80_L84_Q0.8610.99
64_L76_A0.8610.99
460_E463_V0.8610.99
180_S184_A0.8600.99
465_I469_T0.8560.99
438_R469_T0.8540.99
230_A284_L0.8530.99
31_T469_T0.8520.99
12_I39_I0.8510.99
186_R189_L0.8500.99
172_D176_H0.8470.99
196_E314_K0.8460.99
312_A319_P0.8430.98
269_M273_A0.8430.98
66_A80_L0.8420.98
435_E438_R0.8410.98
7_I38_A0.8390.98
44_L50_A0.8380.98
166_W170_C0.8330.98
399_F409_A0.8270.98
472_V475_K0.8270.98
183_R187_A0.8260.98
295_P298_L0.8250.98
359_E362_R0.8240.98
360_I364_L0.8170.98
524_K527_L0.8170.98
308_Q323_P0.8170.98
63_D67_R0.8150.98
10_F44_L0.8130.98
172_D335_Q0.8110.98
65_C69_S0.8110.98
168_Q175_H0.8080.98
272_E275_I0.8040.98
106_F111_A0.8030.98
69_S75_A0.8030.98
311_L314_K0.8030.98
192_Y196_E0.8010.98
384_H389_P0.7980.98
420_P423_P0.7980.98
243_Q252_L0.7940.98
241_N253_V0.7920.98
249_A252_L0.7910.98
162_R169_S0.7910.98
64_L77_L0.7890.98
390_H420_P0.7860.98
131_H134_Q0.7860.98
438_R460_E0.7850.98
77_L94_R0.7800.97
461_V492_L0.7800.97
188_E191_Q0.7770.97
32_G469_T0.7770.97
509_T513_M0.7750.97
350_V353_H0.7730.97
152_E156_L0.7720.97
506_S517_H0.7710.97
215_K219_N0.7690.97
189_L192_Y0.7680.97
246_L277_I0.7680.97
257_I260_D0.7670.97
47_G462_D0.7650.97
184_A187_A0.7640.97
229_N233_L0.7630.97
525_A528_Q0.7600.97
331_E334_Q0.7590.97
413_E428_A0.7590.97
269_M272_E0.7580.97
46_L125_I0.7580.97
75_A94_R0.7570.97
353_H356_Q0.7570.97
478_R498_C0.7540.97
5_L20_F0.7530.97
278_A281_S0.7520.97
252_L256_L0.7480.97
369_Q373_E0.7460.97
81_E85_L0.7460.97
76_A86_E0.7450.97
212_E261_S0.7440.97
5_L78_R0.7440.97
250_K253_V0.7410.97
183_R336_L0.7410.97
422_Q425_Q0.7410.97
2_L78_R0.7400.97
190_L332_E0.7380.96
80_L83_N0.7370.96
476_L480_L0.7370.96
76_A79_W0.7340.96
526_R531_A0.7340.96
68_F85_L0.7330.96
421_G514_T0.7310.96
369_Q397_V0.7310.96
68_F78_R0.7310.96
5_L18_I0.7300.96
227_S230_A0.7290.96
134_Q142_Q0.7280.96
243_Q249_A0.7280.96
435_E469_T0.7250.96
464_G491_H0.7250.96
306_S310_S0.7240.96
208_E211_D0.7210.96
240_A248_T0.7210.96
70_L78_R0.7210.96
172_D349_A0.7210.96
299_F302_E0.7200.96
13_V16_L0.7190.96
433_G437_S0.7190.96
265_G283_E0.7190.96
502_H526_R0.7180.96
62_A69_S0.7180.96
70_L82_E0.7180.96
271_E274_T0.7180.96
380_T392_Q0.7180.96
32_G438_R0.7170.96
177_Q181_Q0.7160.96
460_E464_G0.7160.96
130_Q464_G0.7140.96
143_K397_V0.7140.96
65_C423_P0.7120.96
244_S248_T0.7120.96
437_S460_E0.7110.96
126_Q444_Q0.7110.96
384_H390_H0.7110.96
364_L368_R0.7100.96
213_E217_L0.7090.96
9_N14_R0.7090.96
8_S75_A0.7070.96
45_C76_A0.7060.95
157_Q160_T0.7060.95
279_E282_D0.7050.95
329_L332_E0.7020.95
249_A256_L0.7010.95
375_L379_I0.7000.95
231_L281_S0.6990.95
163_Y167_H0.6970.95
311_L315_H0.6970.95
358_L404_L0.6970.95
523_K527_L0.6970.95
263_L287_Y0.6940.95
63_D69_S0.6930.95
150_A367_Q0.6900.95
365_H399_F0.6880.95
362_R399_F0.6870.95
144_F148_G0.6860.95
367_Q370_Q0.6860.95
20_F503_Y0.6840.95
216_R220_S0.6840.95
469_T473_V0.6840.95
161_A164_Q0.6830.95
319_P323_P0.6820.95
392_Q417_T0.6810.95
229_N252_L0.6810.95
345_T348_L0.6810.95
207_F319_P0.6800.94
308_Q322_L0.6790.94
170_C173_L0.6780.94
390_H393_F0.6770.94
21_H501_Q0.6770.94
190_L329_L0.6770.94
126_Q135_L0.6760.94
228_Q232_A0.6750.94
142_Q395_I0.6730.94
385_A479_Q0.6730.94
390_H509_T0.6710.94
381_D385_A0.6710.94
510_D517_H0.6700.94
363_A366_Q0.6670.94
468_P472_V0.6660.94
164_Q406_A0.6660.94
79_W92_L0.6660.94
68_F83_N0.6650.94
79_W82_E0.6620.94
260_D263_L0.6620.94
251_Q255_E0.6600.94
445_V480_L0.6600.94
295_P299_F0.6600.94
7_I37_I0.6600.94
296_N300_E0.6590.93
437_S461_V0.6580.93
294_D297_R0.6580.93
246_L250_K0.6540.93
95_R103_S0.6530.93
269_M280_A0.6530.93
160_T407_D0.6520.93
343_Q347_A0.6520.93
11_A36_S0.6510.93
278_A282_D0.6490.93
132_A135_L0.6480.93
79_W83_N0.6470.93
322_L325_Y0.6470.93
223_L260_D0.6460.93
121_G125_I0.6450.93
380_T383_M0.6440.93
217_L293_L0.6430.93
230_A233_L0.6430.93
437_S491_H0.6430.93
462_D492_L0.6430.93
47_G435_E0.6430.93
306_S309_I0.6420.93
259_M263_L0.6420.93
52_A63_D0.6420.93
440_A463_V0.6420.93
61_R67_R0.6400.92
264_S267_L0.6400.92
435_E465_I0.6400.92
335_Q342_S0.6380.92
415_R424_M0.6380.92
18_I38_A0.6370.92
146_L412_I0.6360.92
207_F309_I0.6360.92
363_A370_Q0.6360.92
245_Q250_K0.6350.92
346_L349_A0.6350.92
385_A475_K0.6350.92
238_E241_N0.6330.92
184_A188_E0.6320.92
227_S231_L0.6310.92
461_V495_V0.6300.92
398_K413_E0.6290.92
27_I499_G0.6290.92
292_D295_P0.6270.92
134_Q137_T0.6250.92
346_L350_V0.6240.92
181_Q184_A0.6230.91
417_T424_M0.6230.91
435_E489_V0.6230.91
33_A36_S0.6220.91
146_L149_Y0.6200.91
341_D344_E0.6190.91
303_Q306_S0.6160.91
371_Y374_E0.6160.91
485_Q489_V0.6140.91
227_S287_Y0.6130.91
142_Q145_L0.6110.91
143_K147_D0.6100.91
42_L78_R0.6100.91
235_A281_S0.6100.91
93_L105_G0.6090.91
76_A82_E0.6070.90
176_H180_S0.6060.90
355_Q358_L0.6060.90
490_T496_A0.6050.90
466_S529_E0.6050.90
216_R223_L0.6050.90
149_Y378_L0.6050.90
372_A376_A0.6040.90
242_L245_Q0.6040.90
96_V106_F0.6010.90
382_S445_V0.5990.90
416_V439_I0.5990.90
29_G33_A0.5980.90
499_G502_H0.5980.90
75_A80_L0.5970.90
267_L271_E0.5960.90
437_S444_Q0.5960.90
338_D342_S0.5960.90
437_S462_D0.5960.90
51_E61_R0.5950.90
154_S158_E0.5950.90
32_G465_I0.5940.89
12_I37_I0.5940.89
80_L86_E0.5940.89
216_R262_K0.5910.89
159_M163_Y0.5910.89
61_R66_A0.5900.89
438_R464_G0.5890.89
313_R316_H0.5890.89
122_Q126_Q0.5880.89
179_L183_R0.5870.89
166_W169_S0.5870.89
286_H289_D0.5870.89
273_A276_Q0.5860.89
69_S82_E0.5860.89
64_L83_N0.5820.88
244_S250_K0.5810.88
501_Q523_K0.5810.88
438_R491_H0.5800.88
241_N249_A0.5800.88
240_A244_S0.5800.88
152_E155_L0.5780.88
69_S96_V0.5780.88
64_L75_A0.5770.88
437_S440_A0.5770.88
470_A494_Q0.5760.88
519_Q528_Q0.5760.88
200_F322_L0.5760.88
281_S285_R0.5750.88
378_L382_S0.5740.88
162_R357_A0.5730.88
382_S385_A0.5730.88
253_V270_L0.5700.87
302_E306_S0.5700.87
352_K355_Q0.5690.87
65_C85_L0.5670.87
258_G261_S0.5670.87
475_K498_C0.5650.87
305_I309_I0.5650.87
131_H436_L0.5650.87
208_E320_E0.5650.87
115_S118_R0.5640.87
262_K290_R0.5630.87
362_R365_H0.5630.87
224_L227_S0.5620.87
122_Q138_K0.5610.87
80_L91_C0.5610.87
519_Q523_K0.5610.87
366_Q373_E0.5590.86
463_V492_L0.5570.86
287_Y291_L0.5570.86
438_R467_G0.5560.86
33_A460_E0.5550.86
91_C120_L0.5540.86
38_A487_M0.5540.86
93_L117_L0.5530.86
240_A252_L0.5530.86
502_H507_K0.5530.86
271_E275_I0.5520.86
309_I313_R0.5510.86
257_I264_S0.5510.86
460_E491_H0.5500.86
197_L323_P0.5500.86
239_D246_L0.5500.86
462_D470_A0.5500.86
68_F75_A0.5490.85
403_H407_D0.5490.85
433_G489_V0.5480.85
282_D285_R0.5480.85
455_A460_E0.5480.85
294_D300_E0.5470.85
64_L79_W0.5470.85
513_M517_H0.5470.85
308_Q319_P0.5470.85
70_L85_L0.5460.85
276_Q279_E0.5440.85
444_Q463_V0.5440.85
133_H137_T0.5440.85
270_L273_A0.5430.85
345_T352_K0.5430.85
254_S271_E0.5430.85
121_G124_L0.5430.85
451_M484_T0.5420.85
22_S25_T0.5410.85
376_A397_V0.5400.84
421_G427_I0.5390.84
69_S80_L0.5380.84
44_L97_I0.5380.84
440_A444_Q0.5370.84
438_R489_V0.5360.84
266_V283_E0.5360.84
175_H178_Q0.5360.84
462_D474_G0.5350.84
225_T228_Q0.5350.84
438_R470_A0.5350.84
263_L266_V0.5340.84
173_L346_L0.5330.84
392_Q424_M0.5320.84
457_I487_M0.5320.84
28_T460_E0.5310.84
77_L85_L0.5290.83
92_L113_P0.5280.83
218_A302_E0.5280.83
513_M516_T0.5280.83
433_G461_V0.5260.83
301_L305_I0.5260.83
67_R80_L0.5250.83
105_G117_L0.5250.83
440_A492_L0.5250.83
31_T460_E0.5250.83
372_A397_V0.5240.83
376_A383_M0.5230.83
375_L395_I0.5230.83
32_G444_Q0.5230.83
9_N67_R0.5230.83
437_S463_V0.5220.82
36_S40_D0.5220.82
435_E462_D0.5210.82
39_I127_I0.5210.82
508_E525_A0.5190.82
246_L255_E0.5180.82
64_L85_L0.5180.82
214_Y217_L0.5150.82
235_A285_R0.5150.82
419_N422_Q0.5150.82
437_S474_G0.5150.82
469_T472_V0.5140.82
65_C76_A0.5130.81
239_D243_Q0.5130.81
260_D264_S0.5130.81
70_L75_A0.5130.81
269_M283_E0.5120.81
47_G433_G0.5110.81
361_A365_H0.5100.81
187_A194_L0.5100.81
106_F109_G0.5100.81
242_L248_T0.5100.81
76_A85_L0.5080.81
105_G114_L0.5070.81
64_L86_E0.5070.81
137_T436_L0.5060.81
125_I129_G0.5060.81
304_R307_K0.5040.80
260_D291_L0.5040.80
27_I38_A0.5040.80
160_T406_A0.5030.80
69_S76_A0.5020.80
40_D487_M0.5020.80
441_L444_Q0.5010.80
319_P326_Y0.5000.80
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
4ad8A 1 0.8156 100 0.302 Contact Map
4abyA 1 0.6637 100 0.443 Contact Map
4ux3A 1 0.7631 100 0.444 Contact Map
3zgxA 2 0.6148 100 0.474 Contact Map
1w1wA 2 0.566 100 0.529 Contact Map
3auyA 2 0.6275 100 0.532 Contact Map
4i99A 2 0.5606 100 0.589 Contact Map
3qf7A 2 0.6004 100 0.624 Contact Map
3qktA 2 0.5696 100 0.635 Contact Map
2o5vA 1 0.6203 100 0.676 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.015 seconds.