GREMLIN Database
BGLR - Beta-glucuronidase
UniProt: P05804 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
EcoGene: EG11055
Length: 603 (504)
Sequences: 8117 (6164)
Seq/√Len: 274.6

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
105_M116_A4.0831.00
268_R343_E3.9001.00
325_S547_Q3.7551.00
96_K103_E3.7481.00
16_D173_S3.6001.00
83_R117_D3.2741.00
104_V121_Y3.2181.00
213_S255_T3.1511.00
240_H248_Y3.0551.00
312_V343_E3.0321.00
99_V130_I3.0301.00
70_Q129_R2.9901.00
20_A44_A2.9731.00
215_E255_T2.7641.00
88_F132_V2.7521.00
217_R253_C2.7521.00
397_A435_L2.6711.00
308_N336_E2.6651.00
99_V104_V2.6511.00
240_H246_E2.5881.00
436_D439_R2.5221.00
316_A320_W2.4981.00
91_V95_G2.4121.00
91_V170_I2.3951.00
72_E126_K2.3711.00
89_D175_M2.3571.00
312_V316_A2.3391.00
82_Q178_T2.3201.00
255_T264_I2.3061.00
215_E253_C2.2631.00
91_V134_V2.2521.00
102_Q121_Y2.2431.00
188_T400_K2.2361.00
84_I178_T2.2241.00
255_T261_E2.2011.00
96_K106_E2.1631.00
251_E266_P2.1221.00
396_I432_T2.1111.00
72_E129_R2.1091.00
253_C264_I2.0781.00
243_Q286_K2.0741.00
82_Q180_P2.0711.00
426_A430_E2.0471.00
70_Q131_T2.0361.00
253_C266_P2.0321.00
236_V271_I2.0261.00
193_V241_L2.0141.00
103_E106_E2.0141.00
531_D535_R2.0061.00
79_W178_T1.9841.00
72_E127_S1.9711.00
315_H344_H1.9711.00
243_Q246_E1.9681.00
20_A70_Q1.9521.00
326_Y346_I1.9471.00
251_E268_R1.9361.00
216_L269_V1.9321.00
572_T576_K1.9251.00
124_A127_S1.9131.00
316_A344_H1.9071.00
275_A282_L1.8751.00
347_V406_V1.8751.00
219_A248_Y1.8751.00
214_V254_V1.8701.00
389_L427_P1.8551.00
236_V239_P1.8481.00
96_K133_C1.8451.00
407_M462_V1.8311.00
217_R223_V1.8271.00
187_I254_V1.8121.00
84_I122_V1.8091.00
431_A435_L1.7931.00
76_P79_W1.7691.00
315_H341_A1.7571.00
244_P347_V1.7561.00
321_I581_A1.7461.00
49_G54_Q1.7381.00
218_D222_Q1.7361.00
100_N127_S1.7341.00
85_V117_D1.7271.00
18_L44_A1.7261.00
393_K431_A1.7221.00
315_H346_I1.7141.00
12_I175_M1.7131.00
308_N312_V1.7101.00
429_A433_R1.7101.00
74_F126_K1.7041.00
68_W131_T1.6891.00
341_A348_V1.6801.00
39_L70_Q1.6721.00
87_R177_Y1.6691.00
15_L73_V1.6641.00
200_A208_A1.6611.00
252_L269_V1.6611.00
88_F174_V1.6381.00
273_S285_H1.6341.00
68_W133_C1.6311.00
85_V115_E1.6301.00
88_F91_V1.6271.00
223_V226_T1.6191.00
342_D402_H1.6171.00
113_P398_R1.6041.00
215_E223_V1.6031.00
87_R115_E1.5991.00
277_K282_L1.5971.00
393_K435_L1.5891.00
430_E434_K1.5811.00
99_V118_V1.5791.00
290_F406_V1.5631.00
83_R181_N1.5581.00
397_A400_K1.5511.00
74_F127_S1.5441.00
276_V440_P1.5421.00
98_W103_E1.5381.00
283_I347_V1.5011.00
342_D404_S1.5011.00
268_R339_D1.5001.00
203_D231_S1.4941.00
198_N271_I1.4921.00
85_V179_T1.4881.00
87_R175_M1.4811.00
75_I122_V1.4811.00
577_P581_A1.4801.00
340_W344_H1.4671.00
340_W343_E1.4671.00
66_N133_C1.4651.00
293_F323_A1.4601.00
107_H114_F1.4481.00
244_P283_I1.4391.00
201_S231_S1.4371.00
312_V344_H1.4371.00
79_W84_I1.4371.00
214_V252_L1.4341.00
201_S233_T1.4331.00
299_A310_L1.4291.00
516_M522_S1.4201.00
431_A434_K1.4121.00
433_R441_I1.4101.00
83_R120_P1.4081.00
239_P271_I1.4071.00
392_I432_T1.4071.00
51_F67_V1.3991.00
86_L118_V1.3911.00
312_V340_W1.3841.00
314_D575_R1.3741.00
20_A39_L1.3711.00
214_V232_G1.3651.00
326_Y337_M1.3631.00
389_L431_A1.3611.00
393_K434_K1.3591.00
280_Q287_P1.3531.00
249_L268_R1.3531.00
185_D207_V1.3441.00
192_H273_S1.3421.00
199_H235_Q1.3301.00
132_V170_I1.3261.00
14_K173_S1.3251.00
274_V406_V1.3181.00
73_V130_I1.3171.00
302_R307_D1.3161.00
307_D310_L1.3141.00
313_H316_A1.3041.00
45_I54_Q1.3001.00
85_V183_W1.3001.00
548_V584_L1.2951.00
43_R54_Q1.2941.00
83_R119_T1.2931.00
283_I288_F1.2881.00
186_D400_K1.2831.00
261_E264_I1.2741.00
319_D344_H1.2601.00
390_Q394_E1.2561.00
108_Q387_A1.2491.00
301_L557_S1.2481.00
190_V438_T1.2441.00
104_V116_A1.2441.00
309_V312_V1.2411.00
213_S226_T1.2391.00
216_L252_L1.2341.00
86_L97_V1.2311.00
393_K397_A1.2301.00
123_I126_K1.2281.00
91_V97_V1.2231.00
350_D399_D1.2191.00
336_E340_W1.2151.00
45_I49_G1.2131.00
274_V281_F1.2001.00
318_M346_I1.1931.00
189_V269_V1.1911.00
73_V100_N1.1901.00
112_T394_E1.1881.00
81_G181_N1.1871.00
198_N208_A1.1841.00
245_G319_D1.1741.00
217_R251_E1.1731.00
392_I428_L1.1731.00
245_G288_F1.1651.00
191_T271_I1.1621.00
189_V252_L1.1611.00
199_H233_T1.1581.00
295_R333_Y1.1561.00
389_L393_K1.1461.00
186_D397_A1.1411.00
95_G132_V1.1361.00
99_V121_Y1.1291.00
184_V254_V1.1241.00
550_N554_F1.1201.00
101_N131_T1.1191.00
97_V132_V1.1191.00
123_I127_S1.1181.00
225_A234_L1.1171.00
244_P288_F1.1171.00
350_D395_L1.1131.00
74_F125_G1.1071.00
386_Q390_Q1.0991.00
318_M323_A1.0991.00
318_M551_F1.0971.00
333_Y338_L1.0871.00
94_Y108_Q1.0851.00
408_W436_D1.0821.00
282_L287_P1.0781.00
215_E226_T1.0781.00
512_G515_S1.0761.00
227_G230_T1.0751.00
198_N206_V1.0741.00
245_G286_K1.0711.00
66_N135_N1.0701.00
189_V267_L1.0691.00
410_I432_T1.0681.00
90_A172_R1.0641.00
429_A441_I1.0641.00
219_A240_H1.0561.00
83_R183_W1.0521.00
192_H199_H1.0511.00
318_M326_Y1.0471.00
290_F325_S1.0461.00
211_D257_K1.0431.00
197_C235_Q1.0421.00
535_R539_R1.0301.00
338_L399_D1.0281.00
29_G34_W1.0261.00
77_K80_A1.0231.00
39_L42_S1.0221.00
217_R221_Q1.0191.00
257_K262_C1.0191.00
288_F347_V1.0161.00
193_V198_N1.0141.00
98_W133_C1.0131.00
192_H201_S1.0131.00
552_A575_R1.0121.00
396_I431_A1.0081.00
315_H340_W1.0071.00
11_E82_Q1.0071.00
382_G386_Q1.0071.00
313_H317_L1.0051.00
308_N339_D1.0041.00
218_D240_H1.0041.00
18_L46_A1.0041.00
291_T590_G1.0011.00
191_T200_A1.0001.00
42_S70_Q0.9991.00
46_A54_Q0.9971.00
218_D248_Y0.9961.00
338_L350_D0.9941.00
118_V122_V0.9921.00
308_N340_W0.9901.00
194_A273_S0.9891.00
338_L348_V0.9841.00
349_I407_M0.9841.00
13_K178_T0.9791.00
107_H394_E0.9771.00
21_F67_V0.9761.00
338_L402_H0.9751.00
317_L320_W0.9741.00
275_A285_H0.9701.00
281_F406_V0.9691.00
336_E339_D0.9681.00
396_I435_L0.9631.00
584_L588_W0.9631.00
337_M348_V0.9601.00
115_E177_Y0.9561.00
385_Q427_P0.9541.00
505_Y534_H0.9541.00
492_W496_L0.9471.00
43_R56_A0.9461.00
184_V256_A0.9461.00
68_W98_W0.9461.00
299_A307_D0.9451.00
190_V203_D0.9441.00
90_A171_H0.9431.00
550_N568_K0.9411.00
212_V254_V0.9391.00
582_F585_Q0.9391.00
493_Q496_L0.9351.00
187_I265_Y0.9331.00
80_A124_A0.9321.00
52_N168_A0.9261.00
107_H112_T0.9251.00
38_A41_E0.9241.00
422_R426_A0.9221.00
113_P394_E0.9201.00
585_Q589_T0.9181.00
337_M341_A0.9181.00
321_I582_F0.9171.00
302_R310_L0.9141.00
350_D405_V0.9121.00
91_V114_F0.9121.00
98_W131_T0.9051.00
187_I267_L0.9021.00
15_L71_R0.9011.00
586_K589_T0.8951.00
408_W439_R0.8941.00
317_L571_F0.8921.00
24_D29_G0.8921.00
317_L577_P0.8911.00
24_D68_W0.8891.00
30_I133_C0.8891.00
50_S53_D0.8891.00
86_L130_I0.8841.00
295_R314_D0.8821.00
20_A72_E0.8771.00
526_Q529_W0.8771.00
423_E427_P0.8761.00
91_V132_V0.8751.00
59_D62_N0.8731.00
77_K124_A0.8721.00
423_E426_A0.8701.00
309_V316_A0.8671.00
390_Q393_K0.8651.00
10_R263_D0.8591.00
186_D189_V0.8591.00
463_L470_G0.8561.00
258_S261_E0.8561.00
118_V176_L0.8541.00
339_D343_E0.8521.00
94_Y106_E0.8481.00
570_I581_A0.8451.00
104_V118_V0.8431.00
501_I545_G0.8421.00
348_V404_S0.8421.00
534_H537_F0.8411.00
302_R305_G0.8401.00
466_N470_G0.8351.00
328_T333_Y0.8331.00
102_Q120_P0.8301.00
308_N343_E0.8280.99
554_F568_K0.8280.99
433_R461_D0.8230.99
89_D173_S0.8200.99
289_Y543_V0.8200.99
104_V130_I0.8190.99
283_I406_V0.8180.99
267_L401_N0.8180.99
22_S68_W0.8160.99
553_D578_K0.8150.99
311_M340_W0.8120.99
95_G107_H0.8120.99
257_K260_T0.8110.99
182_T256_A0.8090.99
75_I178_T0.8090.99
570_I580_A0.8080.99
218_D221_Q0.8080.99
511_A514_H0.8060.99
430_E433_R0.8030.99
466_N503_T0.8020.99
83_R179_T0.8000.99
427_P430_E0.8000.99
67_V168_A0.7990.99
281_F440_P0.7990.99
502_I505_Y0.7980.99
281_F290_F0.7970.99
18_L71_R0.7970.99
85_V177_Y0.7960.99
197_C200_A0.7950.99
315_H337_M0.7950.99
529_W533_Y0.7950.99
193_V197_C0.7930.99
190_V437_P0.7920.99
306_F311_M0.7910.99
352_T395_L0.7910.99
256_A262_C0.7900.99
460_F464_C0.7840.99
73_V99_V0.7840.99
504_E507_V0.7810.99
318_M571_F0.7810.99
468_Y502_I0.7810.99
434_K437_P0.7810.99
282_L285_H0.7800.99
463_L466_N0.7780.99
46_A49_G0.7780.99
200_A271_I0.7770.99
572_T578_K0.7740.99
281_F544_V0.7730.99
293_F551_F0.7710.99
20_A38_A0.7710.99
546_E588_W0.7690.99
274_V347_V0.7680.99
350_D398_R0.7650.99
182_T210_G0.7610.99
14_K17_G0.7590.99
392_I396_I0.7580.99
184_V265_Y0.7550.99
526_Q530_L0.7550.99
102_Q123_I0.7540.99
14_K175_M0.7530.99
405_V408_W0.7520.99
213_S257_K0.7510.99
501_I504_E0.7510.99
280_Q541_S0.7500.99
13_K79_W0.7490.99
268_R342_D0.7480.99
386_Q389_L0.7480.99
101_N129_R0.7480.99
523_E526_Q0.7440.99
254_V267_L0.7440.99
293_F326_Y0.7440.99
508_D513_L0.7430.99
465_L468_Y0.7430.99
468_Y472_Y0.7420.99
179_T263_D0.7420.99
354_A388_H0.7410.99
499_P504_E0.7400.99
525_Y529_W0.7390.99
194_A197_C0.7390.99
100_N123_I0.7380.99
511_A515_S0.7370.99
192_H195_Q0.7370.99
76_P178_T0.7370.99
204_W232_G0.7350.99
339_D402_H0.7340.99
79_W82_Q0.7330.99
407_M440_P0.7290.99
13_K76_P0.7260.99
460_F463_L0.7250.99
221_Q224_V0.7240.99
25_R29_G0.7240.99
20_A42_S0.7220.99
185_D205_Q0.7200.99
311_M337_M0.7190.99
514_H524_E0.7180.99
501_I544_V0.7170.99
524_E527_C0.7150.99
335_E339_D0.7140.99
290_F547_Q0.7130.98
335_E398_R0.7130.98
288_F324_N0.7100.98
193_V273_S0.7100.98
112_T395_L0.7100.98
89_D113_P0.7090.98
428_L432_T0.7090.98
467_R470_G0.7050.98
194_A199_H0.7030.98
78_G82_Q0.7020.98
466_N471_W0.7000.98
309_V313_H0.6990.98
47_V69_Y0.6980.98
526_Q533_Y0.6980.98
341_A346_I0.6980.98
191_T273_S0.6970.98
94_Y141_Q0.6940.98
510_L513_L0.6910.98
172_R334_A0.6910.98
75_I79_W0.6910.98
315_H326_Y0.6900.98
132_V174_V0.6880.98
323_A588_W0.6870.98
328_T337_M0.6860.98
219_A251_E0.6860.98
468_Y471_W0.6860.98
465_L472_Y0.6850.98
109_G353_A0.6840.98
277_K280_Q0.6830.98
87_R113_P0.6830.98
120_P124_A0.6830.98
410_I429_A0.6820.98
442_T464_C0.6820.98
293_F570_I0.6810.98
76_P124_A0.6810.98
570_I584_L0.6800.98
523_E527_C0.6800.98
432_T441_I0.6780.98
53_D556_T0.6780.98
311_M334_A0.6770.98
290_F349_I0.6760.98
320_W577_P0.6760.98
335_E399_D0.6730.98
23_L67_V0.6710.98
571_F577_P0.6710.98
506_G513_L0.6700.98
11_E178_T0.6680.98
466_N472_Y0.6670.98
21_F51_F0.6660.98
95_G116_A0.6660.98
316_A319_D0.6640.98
292_G325_S0.6630.98
194_A241_L0.6620.98
465_L470_G0.6610.98
496_L504_E0.6600.98
530_L580_A0.6600.98
583_L587_R0.6570.97
193_V285_H0.6570.97
190_V400_K0.6570.97
193_V271_I0.6560.97
321_I577_P0.6550.97
492_W495_K0.6550.97
536_V539_R0.6530.97
134_V170_I0.6530.97
194_A198_N0.6520.97
312_V336_E0.6520.97
555_A573_R0.6510.97
23_L65_G0.6500.97
464_C468_Y0.6500.97
581_A585_Q0.6500.97
317_L575_R0.6490.97
498_Q504_E0.6490.97
400_K435_L0.6480.97
137_E168_A0.6480.97
97_V114_F0.6470.97
506_G509_T0.6460.97
61_R64_A0.6450.97
52_N92_T0.6430.97
504_E509_T0.6430.97
113_P399_D0.6430.97
84_I119_T0.6420.97
49_G53_D0.6410.97
469_Y473_V0.6400.97
26_E29_G0.6390.97
201_S204_W0.6390.97
47_V51_F0.6380.97
71_R130_I0.6380.97
506_G530_L0.6360.97
204_W214_V0.6360.97
274_V440_P0.6340.97
329_S333_Y0.6330.97
492_W504_E0.6320.97
173_S336_E0.6320.97
311_M336_E0.6310.97
247_G283_I0.6300.97
290_F347_V0.6290.97
37_S123_I0.6290.97
28_C32_Q0.6290.97
384_T388_H0.6280.97
333_Y337_M0.6270.97
51_F55_F0.6250.97
583_L586_K0.6250.97
499_P502_I0.6250.97
222_Q226_T0.6240.97
495_K498_Q0.6220.96
182_T208_A0.6220.96
424_Y427_P0.6210.96
531_D586_K0.6200.96
317_L581_A0.6200.96
118_V121_Y0.6190.96
76_P84_I0.6180.96
96_K135_N0.6180.96
296_H331_Y0.6180.96
387_A391_A0.6170.96
297_E304_K0.6160.96
184_V204_W0.6160.96
328_T350_D0.6150.96
505_Y508_D0.6110.96
45_I51_F0.6100.96
317_L551_F0.6100.96
533_Y536_V0.6100.96
75_I84_I0.6090.96
97_V105_M0.6080.96
435_L438_T0.6080.96
464_C467_R0.6050.96
83_R209_N0.6040.96
12_I177_Y0.6040.96
426_A459_L0.6030.96
88_F114_F0.6030.96
461_D466_N0.6020.96
245_G283_I0.6000.96
205_Q231_S0.6000.96
410_I428_L0.5990.96
528_A532_M0.5980.96
323_A584_L0.5980.96
502_I537_F0.5980.96
267_L339_D0.5980.96
299_A304_K0.5980.96
39_L129_R0.5980.96
535_R538_D0.5970.96
529_W532_M0.5970.96
272_R403_P0.5970.96
232_G235_Q0.5970.96
551_F571_F0.5970.96
145_P149_I0.5960.95
442_T503_T0.5940.95
259_Q262_C0.5930.95
109_G394_E0.5920.95
338_L405_V0.5910.95
218_D251_E0.5900.95
399_D405_V0.5890.95
528_A531_D0.5880.95
276_V281_F0.5880.95
299_A302_R0.5870.95
293_F318_M0.5860.95
71_R75_I0.5860.95
410_I441_I0.5840.95
392_I431_A0.5840.95
85_V185_D0.5820.95
146_G149_I0.5810.95
222_Q225_A0.5800.95
467_R472_Y0.5790.95
530_L534_H0.5790.95
75_I127_S0.5780.95
460_F465_L0.5780.95
75_I118_V0.5780.95
288_F406_V0.5770.95
190_V201_S0.5760.95
78_G84_I0.5750.95
179_T183_W0.5740.94
466_N473_V0.5730.94
15_L47_V0.5720.94
199_H241_L0.5720.94
444_V466_N0.5720.94
165_F555_A0.5720.94
414_P424_Y0.5710.94
50_S167_Y0.5700.94
310_L575_R0.5700.94
510_L514_H0.5690.94
196_D199_H0.5670.94
571_F581_A0.5670.94
197_C239_P0.5670.94
274_V283_I0.5670.94
469_Y472_Y0.5660.94
540_V543_V0.5660.94
47_V53_D0.5650.94
113_P335_E0.5650.94
527_C583_L0.5650.94
20_A129_R0.5640.94
93_H141_Q0.5640.94
385_Q389_L0.5640.94
75_I124_A0.5630.94
91_V107_H0.5630.94
39_L131_T0.5620.94
97_V107_H0.5610.94
198_N204_W0.5600.94
325_S406_V0.5600.94
538_D587_R0.5580.94
382_G385_Q0.5570.94
22_S41_E0.5570.94
80_A127_S0.5570.94
530_L533_Y0.5560.94
200_A269_V0.5560.94
411_A425_F0.5550.93
281_F407_M0.5550.93
310_L313_H0.5550.93
349_I409_S0.5550.93
198_N239_P0.5550.93
136_N139_N0.5540.93
291_T534_H0.5540.93
17_G71_R0.5530.93
195_Q273_S0.5530.93
567_K573_R0.5520.93
188_T435_L0.5520.93
57_D139_N0.5520.93
351_E409_S0.5520.93
524_E533_Y0.5510.93
184_V206_V0.5500.93
216_L236_V0.5500.93
257_K261_E0.5500.93
29_G68_W0.5490.93
534_H538_D0.5480.93
31_D34_W0.5470.93
500_I504_E0.5470.93
429_A443_C0.5470.93
59_D63_Y0.5450.93
492_W542_A0.5450.93
330_H549_W0.5440.93
548_V570_I0.5440.93
333_Y350_D0.5430.93
495_K500_I0.5410.93
217_R220_D0.5410.93
311_M333_Y0.5410.93
50_S305_G0.5400.93
202_V208_A0.5390.92
126_K129_R0.5380.92
523_E529_W0.5370.92
326_Y348_V0.5370.92
216_L234_L0.5370.92
211_D226_T0.5370.92
180_P262_C0.5360.92
410_I425_F0.5360.92
464_C473_V0.5350.92
220_D240_H0.5350.92
188_T203_D0.5350.92
109_G112_T0.5350.92
193_V200_A0.5340.92
24_D133_C0.5340.92
75_I78_G0.5340.92
212_V256_A0.5340.92
287_P544_V0.5340.92
22_S26_E0.5330.92
188_T438_T0.5330.92
38_A70_Q0.5320.92
232_G254_V0.5320.92
463_L467_R0.5290.92
351_E411_A0.5270.92
497_H504_E0.5260.92
30_I68_W0.5250.91
332_P395_L0.5250.91
352_T392_I0.5240.91
306_F310_L0.5240.91
458_D463_L0.5240.91
79_W124_A0.5230.91
241_L273_S0.5230.91
73_V127_S0.5230.91
416_T459_L0.5230.91
349_I442_T0.5220.91
289_Y541_S0.5210.91
463_L468_Y0.5210.91
429_A459_L0.5200.91
219_A343_E0.5190.91
461_D464_C0.5190.91
170_I174_V0.5190.91
296_H549_W0.5170.91
117_D122_V0.5170.91
97_V130_I0.5170.91
504_E508_D0.5170.91
532_M535_R0.5160.91
432_T437_P0.5160.91
289_Y538_D0.5160.91
240_H250_Y0.5150.91
15_L130_I0.5150.91
115_E185_D0.5140.91
214_V217_R0.5140.91
101_N104_V0.5130.91
461_D467_R0.5120.90
536_V540_V0.5120.90
78_G178_T0.5120.90
320_W585_Q0.5110.90
199_H237_V0.5110.90
328_T348_V0.5110.90
289_Y544_V0.5110.90
296_H332_P0.5100.90
389_L428_L0.5100.90
305_G311_M0.5090.90
425_F443_C0.5090.90
120_P123_I0.5090.90
16_D71_R0.5090.90
297_E337_M0.5080.90
82_Q181_N0.5080.90
498_Q507_V0.5070.90
200_A210_G0.5060.90
269_V403_P0.5050.90
251_E254_V0.5050.90
24_D34_W0.5040.90
39_L47_V0.5040.90
107_H116_A0.5030.90
392_I395_L0.5030.90
335_E402_H0.5020.90
25_R65_G0.5010.89
499_P503_T0.5010.89
319_D346_I0.5000.89
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
3lpfA 4 0.9967 100 0.262 Contact Map
2je8A 1 0.8939 100 0.263 Contact Map
4cvuA 2 0.9088 100 0.272 Contact Map
1jz7A 4 0.8889 100 0.282 Contact Map
3bgaA 2 0.8823 100 0.292 Contact Map
4jkmA 4 0.9751 100 0.298 Contact Map
3obaA 4 0.8955 100 0.299 Contact Map
4jklA 4 0.9536 100 0.299 Contact Map
3gm8A 1 0.8723 100 0.299 Contact Map
2vzsA 1 0.9171 100 0.299 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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