FLIC - ECOLI - GREMLIN Contacts

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FLIC - Flagellin

UniProt:	P04949	Sequences: MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSEINNNLQRVRELTVQATTGTNSESDLSSIQDEIKSRLDEIDRVSGQTQFNGVNVLAKNGSMKIQVGANDNQTITIDLKQIDAKTLGLDGFSVKNNDTVTTSAPVTAFGATTTNNIKLTGITLSTEAATDTGGTNPASIEGVYTDNGNDYYAKITGGDNDGKYYAVTVANDGTVTMATGATANATVTDANTTKATTITSGGTPVQIDNTAGSATANLGAVSLVKLQDSKGNDTDTYALKDTNGNLYAADVNETTGAVSVKTITYTDSSGAASSPTAVKLGGDDGKTEVVDIDGKTYDSADLNGGNLQTGLTAGGEALTAVANGKTTDPLKALDDAIASVDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLLQG	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG10321
Length:	498 (490)
Sequences:	1737 (1673)
Seq/√Len:	75.6

ECOLI - FLIC FLGL
BACSU - FLA FLGL

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
37_R	44_D	4.813	1.00
93_R	415_D	4.749	1.00
85_I	88_N	4.348	1.00
85_I	123_I	4.242	1.00
88_N	123_I	4.202	1.00
113_Q	117_K	4.182	1.00
55_T	453_Q	4.177	1.00
91_R	115_E	4.159	1.00
65_A	443_N	3.754	1.00
453_Q	457_Q	3.565	1.00
359_V	363_G	3.474	1.00
59_K	94_E	3.442	1.00
88_N	119_R	3.416	1.00
11_S	15_Q	3.365	1.00
90_Q	93_R	3.358	1.00
112_I	401_A	3.297	1.00
131_Q	136_N	3.250	1.00
37_R	66_R	3.227	1.00
30_E	40_S	3.133	1.00
84_E	87_N	3.131	1.00
122_E	125_R	3.014	1.00
91_R	95_L	3.005	1.00
91_R	94_E	2.949	1.00
75_A	428_L	2.922	1.00
63_Q	66_R	2.861	1.00
312_G	315_T	2.734	1.00
31_R	464_E	2.725	1.00
222_E	230_N	2.719	1.00
21_N	478_G	2.683	1.00
222_E	226_T	2.647	1.00
44_D	47_G	2.598	1.00
110_S	114_D	2.589	1.00
27_S	31_R	2.588	1.00
53_R	108_D	2.560	1.00
217_N	222_E	2.454	1.00
62_T	446_T	2.450	1.00
468_M	472_Q	2.413	1.00
131_Q	134_G	2.330	1.00
454_S	458_D	2.306	1.00
92_V	414_L	2.255	1.00
28_S	459_A	2.205	1.00
92_V	119_R	2.174	1.00
68_A	439_V	2.164	1.00
92_V	116_I	2.153	1.00
424_F	427_S	2.136	1.00
228_N	232_Y	2.135	1.00
222_E	232_Y	2.083	1.00
13_I	16_N	2.076	1.00
25_L	28_S	2.059	1.00
359_V	365_D	2.034	1.00
82_L	421_V	2.034	1.00
52_N	55_T	2.022	1.00
51_A	457_Q	2.004	1.00
16_N	447_T	1.951	1.00
225_Y	230_N	1.946	1.00
400_T	406_K	1.934	1.00
136_N	154_Q	1.934	1.00
463_T	467_N	1.908	1.00
54_F	481_V	1.906	1.00
461_Y	465_V	1.902	1.00
84_E	126_V	1.900	1.00
266_A	270_D	1.895	1.00
49_A	133_N	1.869	1.00
95_L	115_E	1.854	1.00
55_T	457_Q	1.789	1.00
327_L	331_D	1.783	1.00
479_N	491_Q	1.777	1.00
93_R	97_V	1.766	1.00
115_E	430_A	1.764	1.00
47_G	456_I	1.756	1.00
3_Q	491_Q	1.754	1.00
41_A	45_A	1.705	1.00
222_E	225_Y	1.687	1.00
79_E	425_R	1.686	1.00
84_E	437_S	1.681	1.00
38_I	47_G	1.670	1.00
21_N	25_L	1.667	1.00
72_I	76_Q	1.653	1.00
225_Y	229_G	1.645	1.00
6_N	36_L	1.634	1.00
356_P	359_V	1.622	1.00
198_I	202_G	1.598	0.99
162_Q	167_T	1.594	0.99
21_N	29_I	1.587	0.99
196_N	200_L	1.579	0.99
316_D	320_L	1.573	0.99
290_N	294_S	1.555	0.99
357_T	363_G	1.555	0.99
404_N	408_T	1.552	0.99
114_D	427_S	1.543	0.99
106_E	110_S	1.540	0.99
16_N	20_K	1.538	0.99
403_A	406_K	1.536	0.99
477_A	480_S	1.515	0.99
218_P	222_E	1.512	0.99
77_T	132_F	1.512	0.99
287_Q	294_S	1.512	0.99
322_D	325_G	1.509	0.99
88_N	126_V	1.507	0.99
367_K	371_V	1.506	0.99
220_S	223_G	1.480	0.99
299_L	305_V	1.473	0.99
102_G	404_N	1.463	0.99
86_N	422_D	1.447	0.99
222_E	229_G	1.444	0.99
283_G	293_G	1.433	0.99
51_A	447_T	1.432	0.99
55_T	59_K	1.426	0.99
487_Q	490_Q	1.419	0.99
361_L	364_D	1.417	0.99
270_D	273_T	1.417	0.99
481_V	491_Q	1.405	0.99
102_G	114_D	1.399	0.99
49_A	54_F	1.397	0.99
3_Q	19_N	1.390	0.99
249_T	256_V	1.388	0.99
105_S	108_D	1.359	0.98
30_E	39_N	1.359	0.98
226_T	230_N	1.358	0.98
5_I	49_A	1.339	0.98
375_G	379_D	1.328	0.98
432_Q	448_N	1.322	0.98
302_V	305_V	1.319	0.98
311_K	314_D	1.319	0.98
297_A	303_S	1.319	0.98
28_S	471_A	1.310	0.98
361_L	365_D	1.309	0.98
81_A	84_E	1.307	0.98
99_A	116_I	1.307	0.98
28_S	467_N	1.306	0.98
224_V	229_G	1.305	0.98
405_G	409_D	1.304	0.98
36_L	457_Q	1.285	0.98
99_A	112_I	1.282	0.98
52_N	59_K	1.278	0.97
422_D	425_R	1.278	0.97
282_G	287_Q	1.270	0.97
118_S	121_D	1.270	0.97
40_S	55_T	1.267	0.97
127_S	389_Q	1.267	0.97
8_N	11_S	1.266	0.97
415_D	419_A	1.264	0.97
54_F	133_N	1.263	0.97
271_A	275_K	1.246	0.97
38_I	51_A	1.240	0.97
289_D	293_G	1.236	0.97
203_I	206_S	1.236	0.97
135_V	144_M	1.235	0.97
11_S	466_S	1.235	0.97
36_L	459_A	1.234	0.97
232_Y	238_G	1.234	0.97
469_S	482_L	1.233	0.97
465_V	468_M	1.229	0.97
63_Q	94_E	1.222	0.97
309_D	315_T	1.222	0.97
321_K	328_Y	1.220	0.97
48_Q	51_A	1.218	0.97
434_R	442_L	1.216	0.97
112_I	116_I	1.201	0.96
372_D	376_K	1.193	0.96
63_Q	67_N	1.190	0.96
56_S	134_G	1.188	0.96
269_T	273_T	1.187	0.96
357_T	361_L	1.183	0.96
307_L	312_G	1.178	0.96
287_Q	293_G	1.176	0.96
318_Y	327_L	1.170	0.96
203_I	207_T	1.168	0.96
96_T	116_I	1.162	0.96
46_A	50_I	1.158	0.96
369_E	373_I	1.155	0.95
438_A	442_L	1.152	0.95
24_A	28_S	1.150	0.95
311_K	315_T	1.150	0.95
137_V	140_K	1.147	0.95
225_Y	232_Y	1.147	0.95
229_G	233_Y	1.147	0.95
221_I	225_Y	1.146	0.95
410_P	414_L	1.140	0.95
198_I	203_I	1.138	0.95
68_A	435_L	1.133	0.95
45_A	50_I	1.132	0.95
468_M	488_V	1.131	0.95
13_I	447_T	1.131	0.95
231_D	234_A	1.122	0.95
54_F	108_D	1.110	0.94
62_T	65_A	1.108	0.94
17_N	34_S	1.107	0.94
127_S	138_L	1.104	0.94
225_Y	236_I	1.097	0.94
321_K	324_N	1.097	0.94
283_G	288_I	1.086	0.94
305_V	308_Q	1.082	0.94
474_I	484_K	1.076	0.93
468_M	475_Q	1.075	0.93
329_A	333_N	1.069	0.93
374_D	379_D	1.066	0.93
146_I	435_L	1.056	0.93
102_G	109_L	1.051	0.93
5_I	133_N	1.051	0.93
418_I	422_D	1.043	0.92
192_A	200_L	1.042	0.92
81_A	130_T	1.042	0.92
295_A	299_L	1.040	0.92
80_G	84_E	1.038	0.92
85_I	126_V	1.036	0.92
250_V	254_G	1.035	0.92
90_Q	97_V	1.034	0.92
217_N	232_Y	1.031	0.92
430_A	434_R	1.029	0.92
52_N	447_T	1.029	0.92
309_D	312_G	1.024	0.92
52_N	422_D	1.022	0.91
245_Y	248_V	1.017	0.91
100_T	408_T	1.017	0.91
217_N	225_Y	1.017	0.91
66_R	70_D	1.013	0.91
4_V	492_V	1.013	0.91
82_L	163_I	1.001	0.91
10_L	26_S	1.000	0.91
373_I	377_T	1.000	0.91
90_Q	108_D	0.984	0.90
48_Q	52_N	0.976	0.89
465_V	469_S	0.975	0.89
247_A	251_A	0.969	0.89
286_V	291_T	0.968	0.89
373_I	381_A	0.967	0.89
300_G	303_S	0.965	0.89
226_T	229_G	0.963	0.89
113_Q	402_V	0.961	0.89
478_G	490_Q	0.958	0.89
111_S	114_D	0.956	0.88
81_A	126_V	0.955	0.88
369_E	374_D	0.951	0.88
218_P	223_G	0.951	0.88
15_Q	19_N	0.949	0.88
117_K	121_D	0.949	0.88
199_K	202_G	0.948	0.88
193_T	200_L	0.948	0.88
4_V	19_N	0.947	0.88
126_V	130_T	0.947	0.88
104_N	108_D	0.943	0.88
319_A	329_A	0.941	0.88
470_K	474_I	0.940	0.88
354_S	359_V	0.940	0.88
3_Q	31_R	0.940	0.88
68_A	442_L	0.937	0.87
230_N	240_D	0.933	0.87
354_S	357_T	0.933	0.87
440_T	443_N	0.931	0.87
306_K	312_G	0.927	0.87
482_L	486_N	0.925	0.87
184_S	188_T	0.924	0.87
21_N	435_L	0.924	0.87
256_V	266_A	0.923	0.87
49_A	94_E	0.923	0.87
457_Q	479_N	0.919	0.86
7_T	55_T	0.915	0.86
288_I	295_A	0.913	0.86
343_T	347_T	0.912	0.86
17_N	28_S	0.906	0.86
225_Y	228_N	0.904	0.86
3_Q	13_I	0.903	0.85
361_L	369_E	0.903	0.85
102_G	111_S	0.903	0.85
250_V	253_D	0.903	0.85
322_D	326_N	0.902	0.85
256_V	273_T	0.901	0.85
84_E	88_N	0.901	0.85
226_T	236_I	0.898	0.85
303_S	307_L	0.898	0.85
229_G	232_Y	0.896	0.85
472_Q	479_N	0.894	0.85
466_S	478_G	0.892	0.85
443_N	487_Q	0.892	0.85
326_N	341_V	0.892	0.85
479_N	487_Q	0.891	0.85
371_V	374_D	0.890	0.85
230_N	233_Y	0.889	0.85
331_D	337_G	0.888	0.84
83_S	87_N	0.887	0.84
248_V	262_A	0.885	0.84
201_T	205_L	0.883	0.84
219_A	222_E	0.880	0.84
165_A	169_G	0.878	0.84
278_T	295_A	0.878	0.84
320_L	328_Y	0.877	0.84
11_S	21_N	0.877	0.84
91_R	122_E	0.876	0.84
25_L	29_I	0.875	0.84
102_G	135_V	0.875	0.84
54_F	78_T	0.874	0.84
222_E	228_N	0.873	0.83
31_R	472_Q	0.872	0.83
32_L	39_N	0.870	0.83
176_K	179_D	0.868	0.83
453_Q	479_N	0.866	0.83
403_A	407_T	0.864	0.83
10_L	14_T	0.863	0.83
149_G	154_Q	0.863	0.83
387_N	393_T	0.860	0.83
461_Y	492_V	0.859	0.82
308_Q	311_K	0.857	0.82
114_D	426_S	0.856	0.82
285_P	298_N	0.856	0.82
123_I	129_Q	0.855	0.82
305_V	312_G	0.855	0.82
217_N	230_N	0.854	0.82
256_V	261_G	0.852	0.82
64_A	442_L	0.852	0.82
31_R	41_A	0.852	0.82
396_G	399_L	0.851	0.82
105_S	134_G	0.850	0.82
149_G	169_G	0.849	0.82
248_V	251_A	0.847	0.82
21_N	42_K	0.847	0.82
480_S	483_A	0.846	0.82
48_Q	425_R	0.846	0.82
257_T	268_V	0.845	0.81
223_G	227_D	0.844	0.81
471_A	494_S	0.842	0.81
347_T	358_A	0.842	0.81
251_A	255_T	0.838	0.81
98_Q	112_I	0.838	0.81
299_L	302_V	0.837	0.81
270_D	275_K	0.836	0.81
480_S	484_K	0.832	0.80
48_Q	104_N	0.830	0.80
215_G	218_P	0.830	0.80
475_Q	481_V	0.829	0.80
446_T	450_S	0.829	0.80
285_P	294_S	0.822	0.80
373_I	379_D	0.822	0.80
255_T	260_T	0.820	0.79
246_Y	250_V	0.820	0.79
376_K	379_D	0.818	0.79
71_G	148_V	0.818	0.79
290_N	293_G	0.817	0.79
452_A	482_L	0.816	0.79
99_A	113_Q	0.811	0.79
264_A	270_D	0.808	0.78
4_V	471_A	0.805	0.78
453_Q	470_K	0.804	0.78
9_S	12_L	0.803	0.78
291_T	300_G	0.802	0.78
52_N	453_Q	0.799	0.78
284_T	293_G	0.799	0.78
324_N	327_L	0.796	0.77
293_G	299_L	0.794	0.77
259_A	272_N	0.792	0.77
194_T	198_I	0.792	0.77
28_S	464_E	0.788	0.77
472_Q	476_Q	0.786	0.77
279_I	284_T	0.784	0.76
41_A	50_I	0.784	0.76
355_S	361_L	0.784	0.76
21_N	475_Q	0.782	0.76
92_V	95_L	0.782	0.76
181_V	184_S	0.780	0.76
262_A	273_T	0.780	0.76
284_T	290_N	0.779	0.76
94_E	115_E	0.779	0.76
286_V	289_D	0.779	0.76
291_T	296_T	0.779	0.76
68_A	122_E	0.778	0.76
39_N	47_G	0.777	0.76
94_E	108_D	0.776	0.76
37_R	463_T	0.775	0.76
278_T	282_G	0.775	0.76
333_N	337_G	0.772	0.75
52_N	63_Q	0.770	0.75
249_T	268_V	0.769	0.75
6_N	15_Q	0.769	0.75
102_G	160_L	0.766	0.75
38_I	43_D	0.766	0.75
368_T	371_V	0.761	0.74
123_I	126_V	0.761	0.74
59_K	90_Q	0.760	0.74
318_Y	328_Y	0.760	0.74
10_L	18_I	0.759	0.74
475_Q	479_N	0.758	0.74
318_Y	326_N	0.758	0.74
97_V	108_D	0.758	0.74
201_T	224_V	0.757	0.74
284_T	288_I	0.755	0.74
95_L	122_E	0.752	0.73
210_A	213_T	0.751	0.73
334_E	337_G	0.751	0.73
279_I	293_G	0.750	0.73
193_T	196_N	0.750	0.73
95_L	112_I	0.750	0.73
452_A	456_I	0.749	0.73
96_T	410_P	0.748	0.73
267_T	270_D	0.748	0.73
88_N	92_V	0.747	0.73
231_D	236_I	0.746	0.73
22_Q	148_V	0.746	0.73
5_I	491_Q	0.746	0.73
471_A	490_Q	0.745	0.73
473_I	491_Q	0.745	0.73
278_T	286_V	0.744	0.73
179_D	183_T	0.743	0.72
15_Q	468_M	0.743	0.72
295_A	302_V	0.742	0.72
113_Q	116_I	0.742	0.72
288_I	311_K	0.742	0.72
236_I	239_G	0.741	0.72
295_A	298_N	0.741	0.72
489_P	494_S	0.738	0.72
76_Q	432_Q	0.736	0.72
6_N	9_S	0.735	0.72
290_N	296_T	0.735	0.72
195_T	209_A	0.734	0.71
65_A	69_N	0.733	0.71
54_F	445_T	0.731	0.71
438_A	474_I	0.730	0.71
441_N	444_N	0.730	0.71
318_Y	322_D	0.730	0.71
4_V	29_I	0.729	0.71
347_T	354_S	0.728	0.71
136_N	139_A	0.728	0.71
150_A	154_Q	0.728	0.71
471_A	491_Q	0.728	0.71
287_Q	290_N	0.727	0.71
116_I	120_L	0.724	0.70
359_V	373_I	0.723	0.70
15_Q	466_S	0.722	0.70
465_V	481_V	0.722	0.70
301_A	307_L	0.720	0.70
226_T	231_D	0.720	0.70
269_T	272_N	0.720	0.70
369_E	372_D	0.719	0.70
88_N	129_Q	0.718	0.70
54_F	103_T	0.717	0.70
31_R	52_N	0.714	0.69
287_Q	297_A	0.713	0.69
129_Q	469_S	0.711	0.69
340_S	348_D	0.710	0.69
54_F	59_K	0.708	0.69
158_I	161_K	0.707	0.69
438_A	447_T	0.705	0.68
42_K	479_N	0.705	0.68
78_T	81_A	0.702	0.68
12_L	16_N	0.702	0.68
355_S	362_G	0.701	0.68
226_T	232_Y	0.700	0.68
288_I	302_V	0.698	0.68
20_K	23_S	0.696	0.67
91_R	119_R	0.696	0.67
42_K	75_A	0.696	0.67
295_A	315_T	0.692	0.67
263_T	266_A	0.690	0.67
222_E	233_Y	0.690	0.67
22_Q	118_S	0.690	0.67
424_F	431_V	0.689	0.67
96_T	100_T	0.689	0.67
372_D	378_Y	0.687	0.66
146_I	149_G	0.686	0.66
45_A	122_E	0.686	0.66
369_E	375_G	0.683	0.66
29_I	469_S	0.681	0.66
201_T	209_A	0.681	0.66
469_S	473_I	0.681	0.66
437_S	461_Y	0.679	0.66
3_Q	54_F	0.678	0.65
281_S	284_T	0.677	0.65
185_A	189_A	0.677	0.65
220_S	225_Y	0.677	0.65
131_Q	445_T	0.676	0.65
359_V	383_L	0.676	0.65
265_N	270_D	0.675	0.65
37_R	47_G	0.675	0.65
260_T	265_N	0.674	0.65
451_E	455_R	0.674	0.65
54_F	58_I	0.671	0.65
194_T	206_S	0.670	0.64
3_Q	472_Q	0.670	0.64
418_I	457_Q	0.669	0.64
122_E	434_R	0.669	0.64
256_V	259_A	0.668	0.64
221_I	232_Y	0.667	0.64
45_A	115_E	0.666	0.64
128_G	389_Q	0.665	0.64
197_N	200_L	0.664	0.64
372_D	379_D	0.664	0.64
362_G	369_E	0.661	0.63
176_K	181_V	0.661	0.63
70_D	73_S	0.659	0.63
219_A	223_G	0.656	0.63
58_I	450_S	0.656	0.63
325_G	328_Y	0.656	0.63
246_Y	249_T	0.656	0.63
296_T	300_G	0.655	0.63
427_S	431_V	0.654	0.63
427_S	445_T	0.653	0.62
279_I	311_K	0.653	0.62
266_A	272_N	0.652	0.62
57_N	64_A	0.652	0.62
28_S	31_R	0.651	0.62
286_V	298_N	0.651	0.62
32_L	72_I	0.650	0.62
228_N	231_D	0.650	0.62
30_E	42_K	0.648	0.62
85_I	421_V	0.647	0.62
296_T	299_L	0.647	0.62
469_S	491_Q	0.647	0.62
34_S	468_M	0.645	0.62
8_N	486_N	0.645	0.62
441_N	452_A	0.644	0.61
45_A	52_N	0.644	0.61
331_D	336_T	0.642	0.61
220_S	230_N	0.641	0.61
287_Q	291_T	0.640	0.61
52_N	102_G	0.639	0.61
7_T	453_Q	0.639	0.61
254_G	276_A	0.638	0.61
7_T	15_Q	0.637	0.61
279_I	290_N	0.636	0.60
287_Q	292_A	0.636	0.60
445_T	449_L	0.635	0.60
435_L	479_N	0.635	0.60
66_R	455_R	0.634	0.60
218_P	226_T	0.633	0.60
306_K	310_S	0.631	0.60
163_I	168_L	0.631	0.60
83_S	86_N	0.631	0.60
107_S	110_S	0.628	0.59
461_Y	466_S	0.626	0.59
132_F	136_N	0.624	0.59
200_L	204_T	0.624	0.59
30_E	84_E	0.624	0.59
228_N	233_Y	0.621	0.59
330_A	334_E	0.621	0.59
400_T	410_P	0.620	0.59
299_L	303_S	0.618	0.58
76_Q	130_T	0.617	0.58
253_D	256_V	0.616	0.58
278_T	293_G	0.616	0.58
359_V	362_G	0.615	0.58
249_T	252_N	0.615	0.58
224_V	230_N	0.613	0.58
51_A	59_K	0.612	0.58
29_I	445_T	0.611	0.57
305_V	309_D	0.611	0.57
131_Q	135_V	0.611	0.57
167_T	170_L	0.608	0.57
246_Y	269_T	0.606	0.57
78_T	137_V	0.604	0.57
468_M	480_S	0.604	0.57
29_I	468_M	0.603	0.56
96_T	99_A	0.603	0.56
50_I	70_D	0.602	0.56
36_L	42_K	0.602	0.56
91_R	455_R	0.602	0.56
63_Q	97_V	0.602	0.56
70_D	122_E	0.601	0.56
103_T	133_N	0.601	0.56
37_R	459_A	0.600	0.56
217_N	229_G	0.599	0.56
463_T	466_S	0.599	0.56
283_G	294_S	0.597	0.56
375_G	378_Y	0.596	0.56
481_V	484_K	0.596	0.56
195_T	386_G	0.594	0.55
267_T	271_A	0.594	0.55
98_Q	473_I	0.594	0.55
305_V	311_K	0.594	0.55
328_Y	333_N	0.594	0.55
247_A	260_T	0.593	0.55
52_N	481_V	0.593	0.55
232_Y	236_I	0.592	0.55
447_T	457_Q	0.591	0.55
25_L	134_G	0.590	0.55
117_K	406_K	0.589	0.55
51_A	58_I	0.588	0.55
438_A	441_N	0.588	0.55
472_Q	475_Q	0.588	0.55
461_Y	469_S	0.587	0.54
369_E	377_T	0.586	0.54
279_I	282_G	0.586	0.54
279_I	288_I	0.585	0.54
99_A	407_T	0.585	0.54
49_A	449_L	0.585	0.54
257_T	270_D	0.585	0.54
8_N	50_I	0.584	0.54
306_K	323_T	0.584	0.54
482_L	485_A	0.583	0.54
87_N	90_Q	0.581	0.54
278_T	284_T	0.580	0.54
434_R	448_N	0.579	0.53
399_L	406_K	0.578	0.53
485_A	495_L	0.578	0.53
70_D	455_R	0.578	0.53
193_T	197_N	0.577	0.53
48_Q	453_Q	0.576	0.53
10_L	29_I	0.576	0.53
230_N	235_K	0.576	0.53
90_Q	122_E	0.575	0.53
379_D	395_G	0.574	0.53
307_L	314_D	0.573	0.53
127_S	136_N	0.572	0.53
353_A	357_T	0.571	0.52
401_A	407_T	0.570	0.52
285_P	295_A	0.570	0.52
62_T	450_S	0.570	0.52
447_T	479_N	0.569	0.52
288_I	291_T	0.569	0.52
42_K	453_Q	0.568	0.52
349_S	356_P	0.567	0.52
250_V	270_D	0.566	0.52
49_A	97_V	0.566	0.52
10_L	17_N	0.565	0.52
9_S	29_I	0.565	0.52
354_S	361_L	0.564	0.52
160_L	163_I	0.564	0.52
10_L	13_I	0.563	0.51
93_R	134_G	0.562	0.51
444_N	488_V	0.562	0.51
254_G	260_T	0.561	0.51
154_Q	163_I	0.561	0.51
81_A	127_S	0.559	0.51
5_I	74_V	0.559	0.51
299_L	309_D	0.555	0.50
124_D	165_A	0.555	0.50
317_T	325_G	0.555	0.50
285_P	292_A	0.555	0.50
303_S	309_D	0.554	0.50
317_T	320_L	0.554	0.50
228_N	234_A	0.553	0.50
266_A	273_T	0.552	0.50
434_R	438_A	0.552	0.50
168_L	171_D	0.551	0.50
198_I	240_D	0.551	0.50
18_I	479_N	0.551	0.50
60_G	93_R	0.550	0.50
60_G	64_A	0.550	0.50
57_N	79_E	0.549	0.50
62_T	463_T	0.549	0.50
53_R	69_N	0.549	0.50
18_I	482_L	0.548	0.50
196_N	203_I	0.548	0.50
31_R	42_K	0.547	0.49
46_A	64_A	0.546	0.49
86_N	102_G	0.546	0.49
34_S	39_N	0.546	0.49
16_N	19_N	0.545	0.49
29_I	54_F	0.545	0.49
470_K	479_N	0.545	0.49
211_T	214_G	0.544	0.49
303_S	306_K	0.544	0.49
217_N	220_S	0.543	0.49
57_N	61_L	0.543	0.49
303_S	311_K	0.541	0.49
8_N	12_L	0.541	0.49
308_Q	313_N	0.541	0.49
73_S	76_Q	0.541	0.49
187_V	191_G	0.541	0.49
447_T	451_E	0.541	0.49
92_V	120_L	0.541	0.49
192_A	196_N	0.540	0.49
434_R	455_R	0.539	0.48
89_L	414_L	0.539	0.48
17_N	78_T	0.537	0.48
246_Y	253_D	0.537	0.48
126_V	136_N	0.537	0.48
281_S	294_S	0.537	0.48
84_E	427_S	0.536	0.48
229_G	234_A	0.536	0.48
464_E	467_N	0.535	0.48
353_A	356_P	0.534	0.48
248_V	260_T	0.534	0.48
211_T	215_G	0.533	0.48
198_I	205_L	0.533	0.48
95_L	430_A	0.532	0.48
128_G	494_S	0.531	0.47
196_N	201_T	0.530	0.47
3_Q	53_R	0.529	0.47
195_T	201_T	0.529	0.47
130_T	433_N	0.528	0.47
278_T	302_V	0.527	0.47
170_L	175_V	0.527	0.47
193_T	201_T	0.526	0.47
195_T	203_I	0.526	0.47
88_N	122_E	0.525	0.47
389_Q	394_A	0.525	0.47
32_L	464_E	0.525	0.47
34_S	49_A	0.524	0.47
39_N	60_G	0.523	0.46
367_K	374_D	0.523	0.46
319_A	327_L	0.522	0.46
465_V	484_K	0.522	0.46
371_V	379_D	0.520	0.46
38_I	456_I	0.520	0.46
471_A	481_V	0.519	0.46
7_T	46_A	0.519	0.46
302_V	309_D	0.519	0.46
299_L	306_K	0.519	0.46
12_L	29_I	0.519	0.46
375_G	385_G	0.518	0.46
18_I	21_N	0.518	0.46
294_S	297_A	0.518	0.46
196_N	202_G	0.517	0.46
453_Q	484_K	0.517	0.46
334_E	338_A	0.517	0.46
300_G	307_L	0.516	0.46
65_A	439_V	0.516	0.46
180_T	184_S	0.515	0.45
21_N	479_N	0.515	0.45
473_I	488_V	0.514	0.45
90_Q	94_E	0.513	0.45
208_E	231_D	0.513	0.45
51_A	86_N	0.512	0.45
344_I	353_A	0.512	0.45
226_T	256_V	0.511	0.45
300_G	306_K	0.511	0.45
435_L	444_N	0.511	0.45
444_N	448_N	0.511	0.45
335_T	339_V	0.511	0.45
53_R	453_Q	0.511	0.45
259_A	263_T	0.509	0.45
262_A	370_V	0.508	0.45
278_T	283_G	0.508	0.45
52_N	457_Q	0.508	0.45
379_D	384_N	0.506	0.44
279_I	294_S	0.506	0.44
82_L	85_I	0.504	0.44
314_D	337_G	0.504	0.44
226_T	258_M	0.504	0.44
225_Y	234_A	0.503	0.44
200_L	207_T	0.503	0.44
295_A	303_S	0.503	0.44
115_E	483_A	0.503	0.44
323_T	335_T	0.501	0.44
54_F	92_V	0.500	0.44
336_T	349_S	0.500	0.44

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
1ucuA	1	0.9618	100	0.26	Contact Map
3k8wA	1	0.5904	100	0.535	Contact Map
3v47C	1	0.5783	100	0.55	Contact Map
3pwxA	2	0.4498	100	0.57	Contact Map
2d4xA	1	0.4237	100	0.582	Contact Map
1io1A	1	0.739	100	0.597	Contact Map
4nx9A	1	0.5542	100	0.619	Contact Map
4cfiA	1	0.5141	100	0.705	Contact Map
3k1iC	1	0.241	99.9	0.774	Contact Map
1oryB	2	0.0803	99.5	0.838	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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