MALF - ECOLI - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

MALF - Maltose transport system permease protein MalF

UniProt:	P02916	Sequences: MDVIKKKHWWQSDALKWSVLGLLGLLVGYLVVLMYAQGEYLFAITTLILSSAGLYIFANRKAYAWRYVYPGMAGMGLFVLFPLVCTIAIAFTNYSSTNQLTFERAQEVLLDRSWQAGKTYNFGLYPAGDEWQLALSDGETGKNYLSDAFKFGGEQKLQLKETTAQPEGERANLRVITQNRQALSDITAILPDGNKVMMSSLRQFSGTQPLYTLDGDGTLTNNQSGVKYRPNNQIGFYQSITADGNWGDEKLSPGYTVTTGWKNFTRVFTDEGIQKPFLAIFVWTVVFSLITVFLTVAVGMVLACLVQWEALRGKAVYRVLLILPYAVPSFISILIFKGLFNQSFGEINMMLSALFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVNYTYRIAFEGGGGQDFGLAAAIATLIFLLVGALAIVNLKATRMKFD	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
EcoGene:	EG10555
Length:	514 (445)
Sequences:	580 (431)
Seq/√Len:	20.4

ECOLI - MALF

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
90_A	264_F	10.267	1.00
244_G	248_D	6.483	1.00
412_Q	416_K	5.189	1.00
278_L	282_V	4.599	1.00
221_N	224_S	3.641	1.00
204_F	214_D	3.439	1.00
370_T	374_I	3.254	1.00
179_N	182_A	3.088	0.99
294_L	377_T	2.953	0.99
113_S	116_A	2.920	0.99
264_F	492_T	2.872	0.99
204_F	211_Y	2.849	0.99
372_L	443_L	2.748	0.99
205_S	214_D	2.730	0.99
152_G	155_Q	2.672	0.98
411_F	415_F	2.619	0.98
122_F	133_L	2.609	0.98
366_T	370_T	2.471	0.97
204_F	213_L	2.429	0.97
380_G	437_N	2.405	0.97
143_N	146_S	2.395	0.97
296_V	430_M	2.392	0.97
143_N	148_A	2.321	0.96
295_T	380_G	2.306	0.96
205_S	213_L	2.234	0.95
478_G	483_D	2.217	0.95
205_S	212_T	2.208	0.95
207_T	213_L	2.185	0.94
457_T	460_P	2.172	0.94
240_I	244_G	2.159	0.94
175_V	178_Q	2.153	0.94
471_T	494_I	2.134	0.94
131_W	179_N	2.115	0.93
409_G	412_Q	2.103	0.93
266_R	483_D	2.059	0.92
409_G	416_K	2.043	0.92
496_L	500_A	2.035	0.92
360_A	363_S	2.019	0.92
204_F	207_T	1.988	0.91
207_T	210_L	1.987	0.91
146_S	151_F	1.960	0.90
286_V	290_I	1.954	0.90
211_Y	214_D	1.953	0.90
204_F	212_T	1.945	0.90
206_G	214_D	1.934	0.90
340_F	371_M	1.923	0.90
381_Y	488_A	1.920	0.89
120_Y	127_A	1.919	0.89
215_G	218_T	1.895	0.89
149_F	156_K	1.895	0.89
231_N	238_Q	1.892	0.89
395_I	412_Q	1.857	0.88
176_I	183_L	1.846	0.88
208_Q	212_T	1.841	0.87
204_F	210_L	1.839	0.87
210_L	214_D	1.839	0.87
395_I	426_L	1.839	0.87
295_T	433_S	1.837	0.87
395_I	422_L	1.828	0.87
466_L	469_N	1.805	0.86
250_K	262_K	1.783	0.86
149_F	155_Q	1.783	0.86
302_L	305_L	1.774	0.85
261_W	265_T	1.765	0.85
280_I	461_A	1.748	0.84
285_V	289_L	1.743	0.84
279_A	456_G	1.738	0.84
111_D	114_W	1.732	0.84
205_S	208_Q	1.731	0.84
209_P	213_L	1.730	0.84
290_I	294_L	1.728	0.84
210_L	221_N	1.696	0.83
443_L	447_L	1.663	0.81
139_E	192_D	1.661	0.81
173_L	176_I	1.654	0.81
329_S	443_L	1.634	0.80
206_G	213_L	1.630	0.80
178_Q	182_A	1.628	0.80
185_D	190_L	1.627	0.80
90_A	492_T	1.610	0.79
335_I	476_F	1.601	0.79
208_Q	214_D	1.600	0.79
444_I	469_N	1.598	0.79
154_E	157_L	1.581	0.78
329_S	369_R	1.554	0.77
186_I	190_L	1.551	0.76
241_T	249_E	1.548	0.76
366_T	369_R	1.512	0.74
126_P	129_D	1.506	0.74
240_I	248_D	1.496	0.74
146_S	152_G	1.493	0.74
313_G	406_D	1.482	0.73
294_L	298_V	1.467	0.72
280_I	442_V	1.460	0.72
143_N	149_F	1.457	0.72
206_G	212_T	1.446	0.71
210_L	213_L	1.443	0.71
450_G	465_D	1.439	0.71
431_I	486_L	1.437	0.71
258_T	261_W	1.433	0.70
316_V	320_L	1.427	0.70
228_Y	251_L	1.414	0.69
143_N	147_D	1.414	0.69
181_Q	251_L	1.402	0.69
457_T	493_L	1.392	0.68
429_L	433_S	1.383	0.68
204_F	208_Q	1.383	0.68
295_T	377_T	1.381	0.67
162_T	165_Q	1.380	0.67
461_A	471_T	1.372	0.67
417_I	426_L	1.361	0.66
422_L	478_G	1.361	0.66
335_I	373_I	1.358	0.66
124_L	403_S	1.355	0.66
183_L	186_I	1.351	0.66
279_A	294_L	1.345	0.65
430_M	476_F	1.333	0.65
112_R	115_Q	1.330	0.64
470_Y	474_I	1.324	0.64
322_I	456_G	1.324	0.64
130_E	133_L	1.324	0.64
121_N	135_L	1.323	0.64
156_K	176_I	1.321	0.64
209_P	212_T	1.321	0.64
138_G	141_G	1.317	0.64
207_T	211_Y	1.315	0.64
176_I	301_V	1.315	0.64
333_I	443_L	1.309	0.63
376_N	380_G	1.307	0.63
209_P	214_D	1.306	0.63
146_S	149_F	1.305	0.63
152_G	190_L	1.297	0.62
339_L	393_K	1.294	0.62
306_V	398_D	1.293	0.62
322_I	417_I	1.289	0.62
262_K	496_L	1.281	0.61
346_E	453_D	1.277	0.61
241_T	248_D	1.277	0.61
132_Q	135_L	1.276	0.61
139_E	142_K	1.275	0.61
194_N	203_Q	1.274	0.61
261_W	499_G	1.269	0.61
363_S	377_T	1.266	0.60
198_M	201_L	1.261	0.60
386_I	393_K	1.257	0.60
307_Q	318_R	1.257	0.60
146_S	155_Q	1.233	0.58
324_P	450_G	1.226	0.58
72_M	79_V	1.224	0.58
400_Y	418_T	1.217	0.57
129_D	132_Q	1.212	0.57
324_P	336_F	1.206	0.57
331_I	483_D	1.206	0.57
153_G	156_K	1.203	0.56
65_W	68_V	1.197	0.56
267_V	363_S	1.193	0.56
390_G	439_N	1.191	0.56
430_M	438_F	1.191	0.56
120_Y	136_S	1.186	0.55
56_I	69_Y	1.183	0.55
414_F	490_I	1.176	0.55
181_Q	222_N	1.169	0.54
273_I	456_G	1.151	0.53
140_T	145_L	1.148	0.53
500_A	503_I	1.148	0.53
291_T	384_M	1.146	0.53
243_D	248_D	1.143	0.53
117_G	122_F	1.135	0.52
111_D	116_A	1.132	0.52
148_A	152_G	1.132	0.52
283_W	435_A	1.130	0.52
397_D	483_D	1.128	0.52
356_G	361_W	1.124	0.51
324_P	485_G	1.121	0.51
372_L	444_I	1.117	0.51
220_T	224_S	1.116	0.51
388_C	417_I	1.114	0.51
414_F	476_F	1.108	0.50
200_S	207_T	1.106	0.50
297_A	419_L	1.103	0.50
292_V	401_E	1.098	0.50
448_T	465_D	1.095	0.49
207_T	212_T	1.089	0.49
112_R	121_N	1.086	0.49
161_E	164_A	1.085	0.49
154_E	169_E	1.085	0.49
453_D	456_G	1.085	0.49
125_Y	132_Q	1.084	0.49
438_F	495_F	1.084	0.49
145_L	151_F	1.083	0.49
321_L	395_I	1.080	0.48
330_F	440_N	1.079	0.48
66_R	254_G	1.079	0.48
226_V	251_L	1.078	0.48
365_P	463_Y	1.075	0.48
59_N	123_G	1.075	0.48
190_L	289_L	1.072	0.48
170_R	271_E	1.072	0.48
300_M	392_L	1.068	0.48
438_F	464_T	1.067	0.48
177_T	183_L	1.064	0.47
317_Y	380_G	1.062	0.47
327_V	471_T	1.062	0.47
146_S	150_K	1.061	0.47
341_N	428_P	1.061	0.47
243_D	269_T	1.060	0.47
196_V	417_I	1.058	0.47
317_Y	437_N	1.053	0.47
222_N	226_V	1.050	0.46
288_S	495_F	1.038	0.46
241_T	244_G	1.038	0.46
80_L	214_D	1.037	0.46
68_V	80_L	1.035	0.46
156_K	162_T	1.024	0.45
121_N	128_G	1.016	0.44
414_F	418_T	1.016	0.44
266_R	270_D	1.014	0.44
156_K	160_K	1.008	0.44
82_P	471_T	1.008	0.44
144_Y	149_F	1.007	0.44
201_L	205_S	1.007	0.44
363_S	366_T	1.001	0.43
301_V	304_C	0.998	0.43
383_Y	438_F	0.997	0.43
369_R	466_L	0.995	0.43
169_E	172_N	0.993	0.43
313_G	392_L	0.992	0.43
369_R	372_L	0.991	0.43
241_T	289_L	0.980	0.42
131_W	135_L	0.979	0.42
434_F	439_N	0.979	0.42
348_N	434_F	0.978	0.42
179_N	183_L	0.978	0.42
169_E	175_V	0.977	0.42
153_G	160_K	0.976	0.42
76_G	403_S	0.974	0.42
236_F	250_K	0.973	0.42
145_L	150_K	0.972	0.41
135_L	354_L	0.971	0.41
265_T	268_F	0.968	0.41
82_P	446_L	0.953	0.40
143_N	150_K	0.953	0.40
470_Y	482_Q	0.950	0.40
117_G	121_N	0.948	0.40
414_F	457_T	0.941	0.40
147_D	150_K	0.941	0.40
444_I	448_T	0.940	0.39
137_D	141_G	0.936	0.39
340_F	403_S	0.933	0.39
428_P	440_N	0.933	0.39
197_M	279_A	0.932	0.39
77_L	180_R	0.925	0.39
193_G	200_S	0.925	0.39
149_F	152_G	0.924	0.38
121_N	218_T	0.923	0.38
409_G	496_L	0.918	0.38
388_C	463_Y	0.916	0.38
280_I	443_L	0.915	0.38
326_A	382_P	0.914	0.38
403_S	413_N	0.907	0.37
428_P	438_F	0.905	0.37
429_L	439_N	0.903	0.37
394_A	431_I	0.886	0.36
243_D	268_F	0.884	0.36
99_Q	340_F	0.879	0.36
306_V	399_L	0.877	0.36
448_T	452_P	0.874	0.35
101_T	177_T	0.873	0.35
338_G	447_L	0.872	0.35
89_I	488_A	0.872	0.35
426_L	461_A	0.870	0.35
153_G	226_V	0.869	0.35
336_F	485_G	0.868	0.35
438_F	485_G	0.867	0.35
322_I	379_L	0.863	0.35
208_Q	213_L	0.860	0.35
144_Y	147_D	0.860	0.35
88_A	92_T	0.859	0.35
137_D	140_T	0.857	0.34
434_F	462_G	0.855	0.34
327_V	331_I	0.854	0.34
395_I	425_P	0.852	0.34
312_R	411_F	0.852	0.34
407_G	420_P	0.851	0.34
424_K	468_V	0.849	0.34
428_P	467_L	0.849	0.34
69_Y	339_L	0.844	0.34
260_G	287_F	0.842	0.34
288_S	469_N	0.839	0.33
72_M	427_T	0.837	0.33
77_L	149_F	0.836	0.33
212_T	222_N	0.834	0.33
324_P	451_G	0.833	0.33
70_P	324_P	0.833	0.33
100_L	104_R	0.832	0.33
65_W	73_A	0.832	0.33
174_R	192_D	0.828	0.33
299_G	382_P	0.827	0.33
183_L	354_L	0.826	0.33
459_T	474_I	0.825	0.33
153_G	176_I	0.822	0.32
444_I	495_F	0.822	0.32
165_Q	169_E	0.822	0.32
182_A	185_D	0.822	0.32
142_K	145_L	0.821	0.32
204_F	209_P	0.821	0.32
119_T	374_I	0.821	0.32
232_N	275_K	0.820	0.32
295_T	321_L	0.816	0.32
333_I	395_I	0.813	0.32
382_P	392_L	0.808	0.32
114_W	136_S	0.807	0.31
71_G	325_Y	0.807	0.31
207_T	214_D	0.807	0.31
283_W	440_N	0.806	0.31
60_R	199_S	0.805	0.31
137_D	156_K	0.804	0.31
164_A	347_I	0.803	0.31
106_Q	213_L	0.801	0.31
399_L	417_I	0.799	0.31
63_Y	66_R	0.799	0.31
274_Q	460_P	0.797	0.31
156_K	194_N	0.795	0.31
341_N	440_N	0.793	0.31
93_N	99_Q	0.785	0.30
175_V	181_Q	0.783	0.30
196_V	253_P	0.783	0.30
323_L	431_I	0.783	0.30
71_G	105_A	0.783	0.30
76_G	259_T	0.782	0.30
269_T	275_K	0.781	0.30
171_A	178_Q	0.780	0.30
202_R	209_P	0.780	0.30
187_T	201_L	0.778	0.30
268_F	274_Q	0.775	0.30
241_T	261_W	0.775	0.30
76_G	101_T	0.775	0.30
119_T	196_V	0.773	0.30
442_V	505_N	0.773	0.30
482_Q	490_I	0.772	0.30
71_G	296_V	0.769	0.29
105_A	254_G	0.766	0.29
278_L	481_G	0.765	0.29
329_S	333_I	0.764	0.29
321_L	470_Y	0.764	0.29
206_G	210_L	0.762	0.29
386_I	483_D	0.760	0.29
299_G	450_G	0.760	0.29
259_T	264_F	0.757	0.29
78_F	421_L	0.757	0.29
456_G	460_P	0.756	0.29
298_V	377_T	0.755	0.29
190_L	221_N	0.753	0.29
223_Q	230_P	0.752	0.28
397_D	417_I	0.750	0.28
205_S	209_P	0.748	0.28
176_I	208_Q	0.748	0.28
167_E	171_A	0.747	0.28
73_A	478_G	0.746	0.28
153_G	192_D	0.746	0.28
331_I	346_E	0.744	0.28
116_A	131_W	0.743	0.28
316_V	496_L	0.741	0.28
143_N	152_G	0.740	0.28
463_Y	477_E	0.740	0.28
468_V	506_L	0.739	0.28
331_I	484_F	0.739	0.28
150_K	154_E	0.736	0.28
229_R	269_T	0.736	0.28
414_F	493_L	0.736	0.28
127_A	289_L	0.734	0.28
117_G	196_V	0.733	0.27
315_A	502_A	0.733	0.27
159_L	195_K	0.730	0.27
89_I	92_T	0.730	0.27
200_S	212_T	0.727	0.27
291_T	372_L	0.726	0.27
287_F	326_A	0.725	0.27
162_T	167_E	0.725	0.27
395_I	399_L	0.724	0.27
450_G	485_G	0.722	0.27
129_D	175_V	0.722	0.27
172_N	175_V	0.721	0.27
436_F	440_N	0.721	0.27
178_Q	181_Q	0.720	0.27
118_K	137_D	0.718	0.27
326_A	438_F	0.716	0.27
130_E	140_T	0.716	0.27
59_N	87_I	0.716	0.27
160_K	164_A	0.715	0.27
147_D	229_R	0.713	0.26
403_S	426_L	0.712	0.26
201_L	240_I	0.711	0.26
166_P	169_E	0.710	0.26
87_I	101_T	0.708	0.26
177_T	375_V	0.707	0.26
337_K	456_G	0.707	0.26
273_I	297_A	0.706	0.26
104_R	196_V	0.705	0.26
286_V	465_D	0.705	0.26
200_S	204_F	0.705	0.26
93_N	428_P	0.703	0.26
433_S	441_F	0.701	0.26
201_L	230_P	0.700	0.26
401_E	472_Y	0.697	0.26
142_K	240_I	0.696	0.26
81_F	85_C	0.696	0.26
155_Q	159_L	0.695	0.26
175_V	196_V	0.694	0.25
428_P	495_F	0.693	0.25
444_I	464_T	0.693	0.25
60_R	240_I	0.693	0.25
215_G	220_T	0.692	0.25
322_I	455_L	0.691	0.25
324_P	378_W	0.687	0.25
332_S	368_A	0.686	0.25
348_N	440_N	0.685	0.25
466_L	470_Y	0.684	0.25
256_T	261_W	0.684	0.25
300_M	412_Q	0.683	0.25
325_Y	382_P	0.683	0.25
336_F	448_T	0.681	0.25
210_L	223_Q	0.681	0.25
279_A	405_M	0.681	0.25
66_R	71_G	0.679	0.25
284_T	318_R	0.678	0.25
106_Q	217_G	0.676	0.25
418_T	473_R	0.675	0.25
164_A	172_N	0.675	0.25
131_W	137_D	0.674	0.24
263_N	266_R	0.674	0.24
196_V	405_M	0.671	0.24
477_E	481_G	0.671	0.24
428_P	465_D	0.671	0.24
422_L	445_Q	0.671	0.24
282_V	414_F	0.669	0.24
132_Q	136_S	0.668	0.24
437_N	448_T	0.667	0.24
307_Q	314_K	0.666	0.24
333_I	442_V	0.665	0.24
105_A	108_V	0.665	0.24
145_L	173_L	0.665	0.24
151_F	155_Q	0.664	0.24
325_Y	439_N	0.664	0.24
336_F	450_G	0.663	0.24
336_F	468_V	0.663	0.24
144_Y	148_A	0.663	0.24
337_K	482_Q	0.662	0.24
222_N	237_Y	0.660	0.24
439_N	494_I	0.659	0.24
111_D	153_G	0.659	0.24
272_G	320_L	0.658	0.24
96_S	162_T	0.657	0.24
72_M	130_E	0.656	0.24
163_T	236_F	0.655	0.24
137_D	222_N	0.655	0.24
129_D	167_E	0.653	0.23
450_G	464_T	0.652	0.23
210_L	224_S	0.651	0.23
116_A	179_N	0.650	0.23
80_L	84_V	0.650	0.23
351_L	354_L	0.648	0.23
276_P	375_V	0.647	0.23
80_L	88_A	0.647	0.23
365_P	372_L	0.646	0.23
248_D	251_L	0.644	0.23
75_M	361_W	0.644	0.23
376_N	440_N	0.642	0.23
307_Q	491_A	0.642	0.23
130_E	138_G	0.642	0.23
190_L	360_A	0.639	0.23
463_Y	488_A	0.638	0.23
275_K	285_V	0.637	0.23
220_T	228_Y	0.637	0.23
136_S	139_E	0.637	0.23
164_A	243_D	0.636	0.23
299_G	393_K	0.635	0.23
431_I	498_V	0.633	0.23
372_L	387_L	0.632	0.23
350_M	354_L	0.632	0.23
412_Q	422_L	0.632	0.23
446_L	470_Y	0.631	0.22
130_E	135_L	0.629	0.22
248_D	257_V	0.628	0.22
89_I	99_Q	0.628	0.22
72_M	333_I	0.627	0.22
395_I	461_A	0.627	0.22
139_E	293_F	0.627	0.22
294_L	358_K	0.626	0.22
177_T	180_R	0.626	0.22
341_N	390_G	0.624	0.22
84_V	108_V	0.621	0.22
340_F	442_V	0.620	0.22
180_R	192_D	0.619	0.22
330_F	384_M	0.619	0.22
121_N	289_L	0.619	0.22
194_N	198_M	0.618	0.22
222_N	230_P	0.618	0.22
318_R	465_D	0.617	0.22
216_D	227_K	0.615	0.22
288_S	434_F	0.615	0.22
65_W	72_M	0.614	0.22
121_N	175_V	0.609	0.21
307_Q	322_I	0.609	0.21
256_T	500_A	0.609	0.21
64_A	67_Y	0.608	0.21
82_P	331_I	0.608	0.21
331_I	336_F	0.608	0.21
226_V	231_N	0.608	0.21
410_P	415_F	0.607	0.21
117_G	123_G	0.607	0.21
446_L	474_I	0.606	0.21
92_T	263_N	0.605	0.21
390_G	428_P	0.604	0.21
406_D	412_Q	0.603	0.21
181_Q	202_R	0.603	0.21
240_I	264_F	0.601	0.21
280_I	372_L	0.600	0.21
443_L	494_I	0.598	0.21
76_G	262_K	0.598	0.21
140_T	162_T	0.597	0.21
158_Q	161_E	0.597	0.21
500_A	504_V	0.596	0.21
325_Y	432_A	0.594	0.21
149_F	153_G	0.589	0.21
120_Y	496_L	0.589	0.21
216_D	226_V	0.587	0.21
171_A	175_V	0.587	0.21
126_P	134_A	0.587	0.21
120_Y	124_L	0.585	0.20
141_G	144_Y	0.584	0.20
267_V	350_M	0.584	0.20
319_V	460_P	0.584	0.20
59_N	62_A	0.584	0.20
465_D	487_A	0.584	0.20
157_L	160_K	0.583	0.20
223_Q	271_E	0.583	0.20
123_G	128_G	0.582	0.20
215_G	500_A	0.580	0.20
176_I	184_S	0.580	0.20
444_I	452_P	0.579	0.20
443_L	459_T	0.579	0.20
154_E	159_L	0.579	0.20
171_A	223_Q	0.579	0.20
350_M	372_L	0.578	0.20
190_L	200_S	0.578	0.20
393_K	450_G	0.577	0.20
219_L	414_F	0.577	0.20
274_Q	459_T	0.577	0.20
208_Q	279_A	0.576	0.20
281_F	416_K	0.576	0.20
390_G	429_L	0.575	0.20
112_R	234_I	0.574	0.20
231_N	240_I	0.574	0.20
153_G	241_T	0.573	0.20
327_V	340_F	0.572	0.20
293_F	373_I	0.572	0.20
201_L	355_F	0.572	0.20
369_R	373_I	0.571	0.20
94_Y	444_I	0.571	0.20
129_D	143_N	0.570	0.20
134_A	217_G	0.570	0.20
74_G	267_V	0.570	0.20
339_L	366_T	0.569	0.20
448_T	476_F	0.568	0.20
445_Q	508_A	0.568	0.20
406_D	441_F	0.566	0.20
319_V	490_I	0.566	0.20
376_N	439_N	0.566	0.20
381_Y	387_L	0.565	0.20
68_V	71_G	0.561	0.19
62_A	232_N	0.560	0.19
168_G	202_R	0.560	0.19
77_L	214_D	0.560	0.19
176_I	222_N	0.560	0.19
311_L	321_L	0.559	0.19
65_W	400_Y	0.559	0.19
226_V	249_E	0.559	0.19
119_T	203_Q	0.558	0.19
391_L	506_L	0.558	0.19
140_T	316_V	0.558	0.19
260_G	299_G	0.557	0.19
147_D	157_L	0.557	0.19
70_P	450_G	0.557	0.19
274_Q	335_I	0.557	0.19
318_R	422_L	0.556	0.19
335_I	372_L	0.555	0.19
156_K	347_I	0.554	0.19
299_G	324_P	0.554	0.19
69_Y	305_L	0.553	0.19
364_D	463_Y	0.552	0.19
196_V	203_Q	0.552	0.19
399_L	419_L	0.552	0.19
280_I	502_A	0.551	0.19
267_V	446_L	0.550	0.19
258_T	501_L	0.550	0.19
167_E	202_R	0.547	0.19
410_P	503_I	0.547	0.19
428_P	433_S	0.547	0.19
278_L	497_L	0.547	0.19
82_P	470_Y	0.546	0.19
268_F	271_E	0.546	0.19
390_G	465_D	0.546	0.19
126_P	175_V	0.546	0.19
98_N	260_G	0.546	0.19
286_V	373_I	0.546	0.19
391_L	424_K	0.545	0.19
473_R	478_G	0.545	0.19
462_G	499_G	0.545	0.19
284_T	367_T	0.543	0.19
295_T	443_L	0.543	0.19
307_Q	389_M	0.542	0.19
283_W	428_P	0.542	0.19
186_I	189_I	0.541	0.19
77_L	367_T	0.541	0.19
75_M	339_L	0.540	0.19
395_I	503_I	0.540	0.19
121_N	125_Y	0.540	0.19
67_Y	466_L	0.539	0.19
265_T	274_Q	0.536	0.18
201_L	204_F	0.536	0.18
129_D	164_A	0.534	0.18
116_A	199_S	0.534	0.18
170_R	192_D	0.533	0.18
399_L	447_L	0.532	0.18
390_G	494_I	0.531	0.18
324_P	438_F	0.531	0.18
464_T	495_F	0.530	0.18
137_D	265_T	0.530	0.18
306_V	377_T	0.529	0.18
61_K	197_M	0.528	0.18
86_T	92_T	0.527	0.18
391_L	468_V	0.527	0.18
341_N	467_L	0.527	0.18
201_L	207_T	0.526	0.18
281_F	501_L	0.526	0.18
447_L	476_F	0.524	0.18
342_Q	442_V	0.523	0.18
99_Q	343_S	0.523	0.18
294_L	373_I	0.523	0.18
74_G	296_V	0.522	0.18
240_I	298_V	0.522	0.18
321_L	482_Q	0.521	0.18
378_W	438_F	0.520	0.18
441_F	445_Q	0.519	0.18
309_E	419_L	0.518	0.18
436_F	439_N	0.517	0.18
361_W	388_C	0.516	0.18
135_L	153_G	0.516	0.18
379_L	494_I	0.515	0.18
432_A	437_N	0.514	0.18
332_S	378_W	0.514	0.18
483_D	493_L	0.513	0.18
208_Q	211_Y	0.512	0.17
398_D	509_T	0.510	0.17
346_E	471_T	0.510	0.17
355_F	471_T	0.509	0.17
99_Q	453_D	0.509	0.17
308_W	400_Y	0.508	0.17
202_R	211_Y	0.507	0.17
403_S	425_P	0.507	0.17
96_S	109_L	0.507	0.17
259_T	263_N	0.506	0.17
69_Y	371_M	0.506	0.17
232_N	417_I	0.503	0.17
164_A	223_Q	0.501	0.17
158_Q	226_V	0.500	0.17
262_K	268_F	0.500	0.17

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3rlfF	1	0.9533	100	0.377	Contact Map
4tquM	1	0.5447	100	0.72	Contact Map
2onkC	2	0.4903	100	0.732	Contact Map
3d31C	2	0.4825	100	0.743	Contact Map
3rlfG	1	0.5214	100	0.749	Contact Map
4tquN	1	0.5233	100	0.758	Contact Map
4ymuD	2	0.4163	100	0.796	Contact Map
3tuiA	2	0.4047	100	0.804	Contact Map
4i0uA	4	0.1187	58.3	0.972	Contact Map
4ev6A	3	0.1226	58.3	0.972	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0129 seconds.