GREMLIN Database
PHSM - Maltodextrin phosphorylase
UniProt: P00490 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
EcoGene: EG10560
Length: 797 (786)
Sequences: 2222 (1249)
Seq/√Len: 44.6

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
289_H326_H5.4171.00
527_A568_V4.4831.00
488_E775_R4.2771.00
471_K499_Q4.2701.00
675_F758_L4.1341.00
303_V416_F4.0131.00
515_V523_I4.0021.00
497_R770_I3.9111.00
557_R601_L3.8961.00
701_D746_A3.8731.00
764_A768_A3.8481.00
501_R766_T3.8261.00
516_K522_E3.8071.00
417_A446_H3.7651.00
278_A282_A3.6331.00
546_L592_V3.6291.00
374_E378_R3.6151.00
549_I569_F3.5811.00
558_E706_A3.5071.00
483_Q486_N3.4071.00
200_G279_C3.3601.00
505_Q526_Q3.3241.00
668_K778_M3.3111.00
536_L573_A3.2491.00
485_I775_R3.1351.00
497_R763_E3.0731.00
296_H332_D3.0511.00
335_A339_K3.0141.00
698_R709_K2.9701.00
396_K436_E2.8571.00
448_V791_R2.8501.00
492_D767_R2.8431.00
551_A745_F2.8241.00
464_A510_R2.7661.00
666_A671_E2.7151.00
500_Y773_T2.7091.00
658_L680_T2.6911.00
747_A750_E2.6611.00
427_D431_K2.6521.00
705_D709_K2.6091.00
123_F784_S2.5631.00
435_P439_Q2.5461.00
295_L328_M2.5171.00
554_K710_E2.4181.00
285_L321_V2.4041.00
485_I488_E2.3881.00
480_D483_Q2.3841.00
628_I755_V2.3781.00
464_A506_A2.3721.00
628_I655_V2.3701.00
761_D764_A2.3691.00
448_V784_S2.3421.00
98_N101_D2.3421.00
476_E483_Q2.3281.00
500_Y769_A2.3281.00
501_R762_Q2.3051.00
438_H443_N2.2921.00
297_E300_D2.2911.00
452_I649_L2.2801.00
470_D478_A2.2791.00
329_S332_D2.2771.00
507_N510_R2.2711.00
546_L549_I2.2631.00
139_L253_T2.2621.00
472_S490_F2.2481.00
348_L428_L2.2441.00
294_K297_E2.2431.00
556_I602_V2.2331.00
695_V699_K2.2271.00
505_Q509_V2.2181.00
154_K587_F2.2081.00
472_S496_F2.2071.00
494_A763_E2.2031.00
649_L776_C2.1991.00
686_A690_K2.1891.00
466_A477_W2.1881.00
19_W30_M2.1741.00
284_I304_I2.1401.00
533_I622_L2.1231.00
178_V202_A2.1211.00
500_Y770_I2.1041.00
187_T193_E2.0950.99
361_V372_I2.0710.99
786_R790_A2.0670.99
693_D696_K2.0410.99
464_A507_N2.0350.99
281_V321_V2.0260.99
758_L768_A2.0170.99
515_V570_L2.0060.99
288_H297_E2.0010.99
418_V444_K1.9610.99
342_A416_F1.9600.99
185_K194_P1.9590.99
746_A750_E1.9520.99
393_V439_Q1.9520.99
376_N380_K1.9500.99
470_D477_W1.9340.99
330_W334_W1.9190.99
665_I669_V1.9110.99
627_D766_T1.8960.99
787_D791_R1.8810.99
393_V397_L1.8770.99
653_L675_F1.8690.99
486_N489_K1.8690.99
267_K363_G1.8500.99
563_D760_R1.8250.99
285_L298_L1.8210.99
531_I626_A1.8170.99
698_R705_D1.8060.98
666_A674_I1.7970.98
18_Q22_Y1.7960.98
658_L666_A1.7770.98
567_R752_Q1.7720.98
25_N34_Q1.7710.98
611_L618_A1.7550.98
509_V513_E1.7490.98
491_A497_R1.7390.98
349_M637_K1.7320.98
299_A339_K1.7300.98
546_L588_A1.7300.98
123_F785_I1.7240.98
680_T683_Q1.7220.98
751_A754_Q1.7020.98
648_A776_C1.6940.98
513_E517_V1.6920.98
750_E754_Q1.6890.98
32_P101_D1.6790.98
127_M134_A1.6780.98
468_L496_F1.6770.98
472_S499_Q1.6630.97
377_T381_T1.6630.97
704_L745_F1.6610.97
423_A427_D1.6590.97
519_T612_P1.6480.97
569_F606_L1.6410.97
698_R732_G1.6300.97
758_L764_A1.6290.97
58_N292_G1.6210.97
393_V396_K1.6200.97
524_N604_D1.6180.97
559_N562_A1.6170.97
374_E377_T1.6130.97
555_E753_K1.6090.97
470_D475_K1.6060.97
514_F518_R1.6030.97
533_I647_L1.6020.97
528_I628_I1.5930.97
12_Q94_A1.5790.96
563_D605_K1.5720.96
523_I568_V1.5630.96
653_L768_A1.5550.96
473_L486_N1.5430.96
712_E728_L1.5390.96
581_L727_M1.5370.96
176_L202_A1.5360.96
669_V674_I1.5320.96
323_I329_S1.5270.96
469_L473_L1.5250.96
288_H299_A1.5230.96
238_D241_R1.5220.96
556_I562_A1.5180.95
464_A503_I1.5160.95
584_N726_Q1.5160.95
441_W444_K1.5110.95
314_A341_F1.5070.95
754_Q757_V1.5050.95
315_I341_F1.4980.95
71_I121_A1.4880.95
376_N398_A1.4850.95
510_R621_K1.4830.95
179_Q197_T1.4790.95
334_W375_I1.4780.95
491_A771_L1.4750.95
362_K373_N1.4720.95
132_Q795_A1.4720.95
313_I361_V1.4710.95
140_N170_F1.4690.95
131_G212_N1.4660.95
62_V795_A1.4660.95
787_D790_A1.4650.95
312_T410_L1.4630.94
427_D430_V1.4620.94
781_S785_I1.4610.94
282_A321_V1.4600.94
167_Y205_L1.4600.94
127_M132_Q1.4570.94
298_L340_T1.4500.94
312_T411_C1.4500.94
65_I280_S1.4490.94
687_I691_G1.4470.94
725_D729_H1.4270.94
319_L334_W1.4250.94
469_L472_S1.4240.94
696_K699_K1.4150.93
469_L487_L1.4140.93
355_R404_Q1.4110.93
18_Q45_E1.4080.93
512_A525_P1.4050.93
328_M336_I1.4040.93
524_N607_K1.3970.93
298_L302_E1.3950.93
499_Q502_E1.3940.93
300_D339_K1.3870.93
241_R244_Q1.3870.93
496_F770_I1.3840.93
8_D90_D1.3820.93
502_E506_A1.3810.93
587_F591_K1.3750.92
698_R742_M1.3740.92
548_H552_L1.3740.92
554_K706_A1.3740.92
131_G214_V1.3670.92
438_H445_F1.3660.92
551_A555_E1.3650.92
369_M405_V1.3650.92
571_F608_V1.3640.92
392_K395_A1.3620.92
330_W374_E1.3590.92
491_A770_I1.3530.92
783_R787_D1.3500.92
789_Q795_A1.3440.92
468_L503_I1.3440.92
89_Q93_K1.3400.91
571_F589_I1.3340.91
390_D393_V1.3320.91
71_I74_L1.3280.91
703_V746_A1.3280.91
718_D721_K1.3140.91
289_H295_L1.3130.91
684_V740_L1.3070.90
74_L109_P1.3050.90
126_S781_S1.3010.90
658_L676_I1.3000.90
446_H791_R1.2970.90
614_Y623_I1.2950.90
594_D598_N1.2940.90
567_R756_D1.2870.90
506_A509_V1.2860.90
313_I316_P1.2860.90
390_D396_K1.2840.90
288_H293_R1.2770.89
361_V369_M1.2660.89
547_L707_V1.2610.89
137_Y283_D1.2560.88
745_F749_V1.2560.88
78_N208_V1.2520.88
397_L436_E1.2510.88
682_E686_A1.2510.88
514_F621_K1.2500.88
303_V342_A1.2500.88
702_K705_D1.2490.88
417_A448_V1.2470.88
555_E703_V1.2460.88
468_L472_S1.2440.88
551_A703_V1.2410.88
762_Q766_T1.2390.88
752_Q755_V1.2360.88
550_L716_Y1.2340.88
319_L330_W1.2340.88
384_E391_E1.2340.88
288_H292_G1.2300.87
358_V400_V1.2260.87
358_V369_M1.2240.87
619_A623_I1.2240.87
11_F15_L1.2210.87
334_W414_G1.2200.87
565_V760_R1.2190.87
288_H295_L1.2170.87
498_Q763_E1.2140.87
288_H294_K1.2130.87
484_L487_L1.2120.87
498_Q502_E1.2100.87
552_L756_D1.2050.86
187_T191_R1.2000.86
324_D367_R1.1990.86
784_S791_R1.1960.86
552_L569_F1.1950.86
675_F755_V1.1930.86
139_L276_Q1.1900.86
448_V787_D1.1890.86
764_A767_R1.1860.85
182_I271_M1.1840.85
673_N768_A1.1840.85
658_L671_E1.1830.85
488_E771_L1.1820.85
263_T359_K1.1790.85
338_S444_K1.1760.85
454_P481_L1.1750.85
16_S95_Y1.1650.84
151_V156_V1.1600.84
186_V370_Q1.1570.84
533_I623_I1.1560.84
697_W704_L1.1540.84
426_S446_H1.1540.84
466_A470_D1.1520.84
22_Y41_E1.1520.84
412_V418_V1.1500.84
397_L440_L1.1470.83
178_V286_R1.1450.83
521_I609_V1.1440.83
211_R479_N1.1440.83
63_N302_E1.1410.83
550_L588_A1.1360.83
505_Q525_P1.1350.83
380_K383_V1.1330.83
60_R303_V1.1300.82
373_N403_K1.1290.82
362_K369_M1.1280.82
15_L39_V1.1250.82
331_D378_R1.1240.82
469_L496_F1.1230.82
50_Q54_K1.1230.82
246_G250_E1.1200.82
185_K193_E1.1180.82
532_Q545_N1.1170.82
611_L622_L1.1170.82
110_A145_L1.1170.82
556_I605_K1.1170.82
67_M273_Q1.1160.82
482_D786_R1.1140.82
127_M795_A1.1140.82
587_F724_F1.1120.81
157_E583_K1.1110.81
179_Q199_T1.1090.81
299_A336_I1.1090.81
89_Q100_T1.1080.81
665_I674_I1.1060.81
201_Q224_T1.1050.81
473_L483_Q1.1020.81
384_E394_W1.1010.81
666_A676_I1.0990.81
8_D94_A1.0980.81
497_R500_Y1.0960.80
459_K478_A1.0940.80
60_R299_A1.0930.80
523_I529_F1.0880.80
679_H743_A1.0850.80
181_G194_P1.0830.80
293_R297_E1.0810.80
338_S382_L1.0800.80
319_L337_T1.0790.79
531_I622_L1.0740.79
11_F88_V1.0720.79
321_V326_H1.0650.79
196_F271_M1.0650.79
726_Q729_H1.0650.79
312_T315_I1.0640.78
550_L711_L1.0630.78
489_K497_R1.0620.78
65_I314_A1.0620.78
39_V88_V1.0600.78
132_Q789_Q1.0580.78
688_L738_P1.0570.78
497_R766_T1.0530.78
381_T384_E1.0510.78
43_L75_T1.0440.77
708_L728_L1.0420.77
380_K398_A1.0420.77
753_K757_V1.0410.77
771_L775_R1.0410.77
494_A497_R1.0400.77
350_P573_A1.0380.77
299_A335_A1.0360.77
399_V413_V1.0360.77
497_R767_R1.0340.76
696_K700_K1.0320.76
515_V519_T1.0310.76
30_M34_Q1.0280.76
487_L496_F1.0250.76
60_R416_F1.0250.76
167_Y170_F1.0220.76
712_E732_G1.0220.76
667_E778_M1.0220.76
509_V525_P1.0200.75
489_K492_D1.0190.75
547_L711_L1.0180.75
597_N607_K1.0180.75
11_F91_S1.0170.75
551_A749_V1.0150.75
602_V607_K1.0140.75
458_I649_L1.0140.75
32_P105_E1.0100.75
687_I740_L1.0090.75
754_Q758_L1.0080.75
395_A402_D1.0060.74
392_K396_K1.0040.74
361_V405_V1.0040.74
358_V373_N1.0020.74
359_K362_K0.9960.74
429_V433_L0.9950.74
11_F87_D0.9940.74
592_V596_I0.9930.73
426_S429_V0.9880.73
85_Y89_Q0.9860.73
182_I198_I0.9840.73
76_G103_L0.9800.72
319_L371_I0.9800.72
710_E715_K0.9780.72
149_S158_A0.9780.72
492_D761_D0.9760.72
79_L99_L0.9710.72
47_L208_V0.9700.72
26_S52_F0.9670.71
383_V440_L0.9660.71
679_H687_I0.9660.71
679_H740_L0.9660.71
181_G197_T0.9640.71
35_W97_I0.9620.71
459_K466_A0.9610.71
373_N376_N0.9600.71
555_E559_N0.9600.71
750_E753_K0.9600.71
452_I458_I0.9590.71
80_L459_K0.9580.71
143_Y160_D0.9570.71
261_N578_G0.9560.71
298_L322_L0.9550.71
234_F242_A0.9540.70
416_F794_Q0.9530.70
73_R108_D0.9530.70
426_S448_V0.9510.70
591_K594_D0.9510.70
321_V325_E0.9500.70
728_L732_G0.9500.70
58_N301_Y0.9500.70
15_L92_L0.9490.70
708_L742_M0.9490.70
518_R615_C0.9490.70
697_W743_A0.9480.70
732_G742_M0.9440.70
62_V134_A0.9440.70
784_S787_D0.9430.70
655_V751_A0.9420.69
511_L515_V0.9410.69
74_L205_L0.9400.69
430_V438_H0.9380.69
284_I302_E0.9380.69
278_A321_V0.9360.69
466_A469_L0.9330.69
679_H684_V0.9330.69
26_S29_E0.9310.69
602_V605_K0.9300.68
703_V745_F0.9270.68
76_G460_Q0.9250.68
137_Y280_S0.9250.68
295_L298_L0.9240.68
15_L42_A0.9220.68
90_D94_A0.9200.68
147_R613_D0.9190.68
276_Q313_I0.9180.67
297_E328_M0.9150.67
766_T770_I0.9140.67
653_L769_A0.9090.67
528_I565_V0.9080.67
603_G607_K0.9070.67
426_S681_V0.9050.66
683_Q686_A0.9030.66
747_A751_A0.9030.66
30_M35_W0.9020.66
495_K498_Q0.9000.66
626_A647_L0.8990.66
342_A417_A0.8990.66
86_Q89_Q0.8990.66
369_M373_N0.8970.66
611_L621_K0.8970.66
544_L745_F0.8970.66
767_R771_L0.8950.65
671_E674_I0.8940.65
550_L595_V0.8940.65
383_V394_W0.8930.65
89_Q98_N0.8930.65
675_F751_A0.8920.65
400_V405_V0.8890.65
485_I668_K0.8870.65
423_A667_E0.8870.65
722_H725_D0.8860.65
543_H741_V0.8850.65
140_N203_W0.8770.64
304_I340_T0.8770.64
492_D497_R0.8770.64
383_V387_W0.8760.64
229_F234_F0.8710.63
277_C313_I0.8690.63
519_T523_I0.8680.63
588_A711_L0.8670.63
488_E491_A0.8660.63
80_L85_Y0.8650.63
601_L604_D0.8640.63
527_A607_K0.8640.63
387_W393_V0.8640.63
528_I755_V0.8610.62
467_A471_K0.8600.62
296_H328_M0.8590.62
232_T236_D0.8580.62
40_S168_P0.8570.62
629_S654_T0.8550.62
446_H784_S0.8530.62
504_K759_Y0.8530.62
283_D286_R0.8520.62
121_A218_L0.8510.62
298_L318_L0.8510.62
591_K724_F0.8500.61
338_S416_F0.8500.61
655_V665_I0.8500.61
140_N163_H0.8480.61
636_G685_K0.8470.61
476_E480_D0.8410.61
288_H328_M0.8390.60
192_W195_E0.8390.60
273_Q313_I0.8380.60
565_V756_D0.8360.60
177_D201_Q0.8340.60
31_T503_I0.8320.60
154_K723_A0.8320.60
312_T414_G0.8310.60
123_F448_V0.8310.60
277_C312_T0.8310.60
383_V388_P0.8300.60
756_D760_R0.8300.60
288_H298_L0.8300.60
234_F237_G0.8300.60
529_F570_L0.8290.59
525_P529_F0.8280.59
589_I608_V0.8260.59
581_L726_Q0.8240.59
512_A523_I0.8220.59
631_Q652_A0.8220.59
717_S724_F0.8220.59
543_H727_M0.8210.59
595_V716_Y0.8210.59
8_D12_Q0.8190.59
424_L549_I0.8170.58
263_T363_G0.8150.58
79_L85_Y0.8140.58
398_A401_H0.8140.58
172_H224_T0.8130.58
282_A325_E0.8130.58
63_N287_R0.8110.58
597_N603_G0.8110.58
581_L585_I0.8100.58
357_D360_L0.8090.58
13_E17_R0.8090.58
316_P323_I0.8090.58
132_Q786_R0.8050.57
524_N529_F0.8050.57
637_K738_P0.8050.57
177_D199_T0.8050.57
412_V433_L0.8040.57
687_I690_K0.8040.57
130_V786_R0.8040.57
273_Q312_T0.8030.57
614_Y619_A0.8020.57
476_E479_N0.8010.57
429_V435_P0.7990.57
663_V681_V0.7990.57
524_N566_P0.7980.57
109_P620_E0.7970.56
380_K402_D0.7960.56
703_V749_V0.7960.56
142_Q254_K0.7950.56
509_V512_A0.7940.56
704_L742_M0.7940.56
398_A402_D0.7930.56
557_R599_D0.7930.56
475_K478_A0.7930.56
543_H585_I0.7930.56
523_I611_L0.7910.56
401_H404_Q0.7900.56
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273_Q338_S0.5060.30
14_A31_T0.5060.30
231_L752_Q0.5060.30
708_L712_E0.5060.30
426_S791_R0.5050.30
553_Y602_V0.5050.30
328_M332_D0.5050.30
347_T352_A0.5050.30
59_Q301_Y0.5050.30
127_M130_V0.5050.30
345_N352_A0.5040.29
84_W88_V0.5040.29
140_N200_G0.5040.29
595_V717_S0.5040.29
521_I607_K0.5030.29
358_V402_D0.5030.29
348_L433_L0.5030.29
11_F17_R0.5030.29
395_A401_H0.5030.29
702_K706_A0.5030.29
675_F754_Q0.5020.29
515_V521_I0.5020.29
85_Y99_L0.5020.29
349_M433_L0.5020.29
751_A758_L0.5010.29
372_I401_H0.5010.29
339_K416_F0.5010.29
180_V463_P0.5000.29
548_H551_A0.5000.29
44_A437_Y0.5000.29
562_A606_L0.5000.29
457_W614_Y0.5000.29
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
1ygpA 2 0.9912 100 0.298 Contact Map
4bqeA 2 0.9912 100 0.317 Contact Map
1l5wA 2 0.9962 100 0.343 Contact Map
2gj4A 2 0.9812 100 0.344 Contact Map
2c4mA 4 0.9737 100 0.377 Contact Map
4l22A 1 0.941 100 0.437 Contact Map
3nb0A 4 0.6612 98.1 0.976 Contact Map
4qlbA 3 0.67 98.1 0.976 Contact Map
3vueA 1 0.5784 98 0.977 Contact Map
1rzuA 1 0.5508 92.8 0.985 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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