T0918_1-420_1_420 - CASP12 - GREMLIN Contacts

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T0918_1-420_1_420 - T0918_1-420 1-420

ID:	84	Sequences: MESNNGEAKIQKVKNWSPVWIFPIVTALIGAWVLFYHYSHQGPEVTLITANAEGIEGGKTTIKSRSVDVGVVESATLADDLTHVEIKARLNSGMEKLLHKDTVFWVVKPQIGREGISGLGTLLSGVYIELQPGAKGSKMDKYDLLDSPPLAPPDAKGIRVILDSKKAGQLSPGDPVLFRGYRVGSVETSTFDTQKRNISYQLFINAPYDRLVTNNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPKTAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMRQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVDLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQR	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_10
Length:	420 (398)
Sequences:	2099 (1375)
Seq/√Len:	68.9

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
47_L	88_A	9.511	1.00
62_I	88_A	7.057	1.00
290_M	339_I	6.106	1.00
273_D	276_S	4.760	1.00
290_M	409_T	4.734	1.00
73_E	89_R	4.617	1.00
176_V	202_L	4.432	1.00
183_V	250_F	4.358	1.00
61_T	68_D	4.334	1.00
72_V	86_I	4.204	1.00
36_Y	40_H	3.790	1.00
100_K	137_S	3.607	1.00
305_V	339_I	3.588	1.00
55_I	75_A	3.566	1.00
185_S	205_N	3.120	1.00
100_K	139_M	3.086	1.00
35_F	39_S	2.945	1.00
78_A	83_H	2.944	1.00
291_F	334_R	2.923	1.00
186_V	202_L	2.848	1.00
288_Y	339_I	2.755	1.00
49_T	144_L	2.680	1.00
373_K	385_D	2.635	1.00
103_V	131_Q	2.625	1.00
44_E	89_R	2.590	1.00
226_V	235_V	2.540	1.00
176_V	204_I	2.511	1.00
192_D	199_S	2.435	1.00
90_L	98_L	2.364	1.00
43_P	90_L	2.363	1.00
101_D	133_G	2.362	1.00
47_L	62_I	2.345	1.00
167_A	189_S	2.211	1.00
112_G	115_G	2.143	1.00
176_V	248_V	2.120	1.00
262_V	268_F	2.112	1.00
48_I	83_H	2.085	1.00
237_M	243_L	2.085	1.00
62_I	90_L	2.081	1.00
101_D	134_A	2.028	1.00
77_L	97_L	2.022	1.00
160_V	202_L	1.933	1.00
99_H	133_G	1.930	1.00
47_L	144_L	1.908	1.00
159_R	187_E	1.908	1.00
49_T	86_I	1.855	1.00
48_I	85_E	1.816	1.00
314_T	340_R	1.780	1.00
206_A	209_D	1.778	1.00
212_V	216_V	1.778	1.00
221_D	249_S	1.777	1.00
155_A	205_N	1.768	1.00
46_T	141_K	1.766	1.00
102_T	130_L	1.757	1.00
213_T	252_V	1.757	1.00
274_Q	278_Q	1.736	1.00
90_L	94_M	1.704	1.00
311_R	314_T	1.693	1.00
316_S	338_L	1.681	1.00
289_L	336_P	1.661	0.99
228_L	233_M	1.660	0.99
161_I	201_Q	1.660	0.99
361_G	365_K	1.645	0.99
202_L	248_V	1.603	0.99
159_R	201_Q	1.543	0.99
170_L	248_V	1.539	0.99
291_F	336_P	1.526	0.99
399_R	404_Y	1.511	0.99
221_D	238_G	1.482	0.99
272_D	276_S	1.482	0.99
53_E	120_G	1.476	0.99
98_L	130_L	1.474	0.99
287_D	340_R	1.470	0.99
61_T	71_V	1.469	0.99
45_V	88_A	1.462	0.99
296_V	335_I	1.460	0.99
76_T	87_K	1.458	0.99
373_K	383_Y	1.455	0.99
158_I	209_D	1.453	0.99
103_V	145_L	1.449	0.99
385_D	389_Y	1.449	0.99
86_I	144_L	1.447	0.98
227_D	234_R	1.439	0.98
305_V	315_V	1.436	0.98
106_V	144_L	1.435	0.98
48_I	143_D	1.430	0.98
373_K	389_Y	1.427	0.98
361_G	400_E	1.424	0.98
297_R	375_G	1.419	0.98
215_N	256_L	1.411	0.98
192_D	197_N	1.402	0.98
229_T	234_R	1.393	0.98
375_G	383_Y	1.389	0.98
57_G	75_A	1.388	0.98
214_N	262_V	1.366	0.98
262_V	266_T	1.361	0.98
383_Y	417_I	1.361	0.98
339_I	407_I	1.341	0.98
371_S	385_D	1.331	0.97
317_K	338_L	1.324	0.97
72_V	88_A	1.319	0.97
166_K	180_G	1.311	0.97
56_E	59_K	1.309	0.97
32_W	36_Y	1.308	0.97
263_A	266_T	1.300	0.97
101_D	135_K	1.298	0.97
13_V	16_W	1.289	0.97
251_D	274_Q	1.287	0.97
342_E	345_R	1.284	0.97
164_S	198_I	1.282	0.97
163_D	267_A	1.281	0.97
302_G	314_T	1.277	0.97
301_P	318_V	1.263	0.96
101_D	136_G	1.253	0.96
190_T	201_Q	1.252	0.96
110_Q	148_P	1.242	0.96
52_A	75_A	1.242	0.96
208_Y	211_L	1.241	0.96
225_A	236_E	1.235	0.96
74_S	87_K	1.235	0.96
86_I	128_I	1.233	0.96
55_I	72_V	1.223	0.96
389_Y	392_T	1.222	0.96
186_V	248_V	1.221	0.96
95_E	140_D	1.218	0.96
20_W	23_P	1.205	0.95
306_E	311_R	1.204	0.95
160_V	212_V	1.202	0.95
399_R	402_N	1.182	0.95
12_K	25_V	1.180	0.95
240_L	244_L	1.166	0.94
57_G	74_S	1.164	0.94
50_A	146_D	1.159	0.94
46_T	85_E	1.155	0.94
183_V	208_Y	1.154	0.94
316_S	340_R	1.151	0.94
27_A	82_T	1.143	0.94
289_L	338_L	1.137	0.94
44_E	87_K	1.134	0.94
163_D	197_N	1.122	0.93
67_V	186_V	1.116	0.93
69_V	97_L	1.113	0.93
81_L	97_L	1.106	0.93
25_V	28_L	1.099	0.92
130_L	154_D	1.094	0.92
22_F	34_L	1.093	0.92
392_T	395_I	1.090	0.92
49_T	72_V	1.084	0.92
118_G	121_T	1.083	0.92
72_V	144_L	1.083	0.92
219_W	250_F	1.080	0.92
28_L	31_A	1.074	0.92
45_V	62_I	1.071	0.91
104_F	128_I	1.065	0.91
46_T	87_K	1.064	0.91
99_H	130_L	1.064	0.91
78_A	85_E	1.058	0.91
71_V	310_I	1.057	0.91
315_V	337_V	1.056	0.91
290_M	384_V	1.051	0.91
297_R	306_E	1.049	0.91
312_L	341_I	1.047	0.90
164_S	200_Y	1.043	0.90
370_G	384_V	1.040	0.90
88_A	98_L	1.033	0.90
72_V	75_A	1.029	0.90
99_H	139_M	1.024	0.89
188_T	200_Y	1.023	0.89
400_E	405_Q	1.022	0.89
188_T	201_Q	1.021	0.89
292_F	337_V	1.014	0.89
81_L	86_I	1.010	0.89
219_W	251_D	1.008	0.89
307_F	363_L	1.008	0.89
398_I	407_I	1.004	0.89
92_S	95_E	1.003	0.88
357_V	361_G	1.002	0.88
64_S	129_E	1.001	0.88
22_F	27_A	1.000	0.88
124_S	207_P	0.999	0.88
224_I	243_L	0.989	0.88
297_R	303_A	0.985	0.88
220_K	223_G	0.984	0.88
108_K	144_L	0.983	0.87
369_R	392_T	0.980	0.87
102_T	116_I	0.978	0.87
31_A	35_F	0.978	0.87
107_V	127_Y	0.976	0.87
139_M	142_Y	0.973	0.87
180_G	238_G	0.972	0.87
287_D	316_S	0.968	0.87
99_H	135_K	0.964	0.86
214_N	266_T	0.961	0.86
21_I	25_V	0.958	0.86
57_G	132_P	0.957	0.86
97_L	130_L	0.954	0.86
32_W	98_L	0.950	0.86
48_I	141_K	0.944	0.85
11_Q	16_W	0.937	0.85
45_V	90_L	0.936	0.85
190_T	199_S	0.934	0.85
195_K	211_L	0.930	0.84
36_Y	39_S	0.930	0.84
92_S	293_K	0.923	0.84
165_K	376_N	0.918	0.84
167_A	200_Y	0.917	0.84
392_T	396_T	0.912	0.83
16_W	284_D	0.912	0.83
339_I	384_V	0.909	0.83
83_H	176_V	0.909	0.83
231_A	300_Q	0.908	0.83
207_P	345_R	0.907	0.83
290_M	370_G	0.894	0.82
31_A	36_Y	0.893	0.82
33_V	93_G	0.887	0.81
178_F	211_L	0.887	0.81
234_R	273_D	0.884	0.81
362_E	365_K	0.880	0.81
150_L	240_L	0.873	0.80
201_Q	228_L	0.871	0.80
83_H	96_K	0.870	0.80
308_R	387_D	0.870	0.80
44_E	73_E	0.869	0.80
371_S	389_Y	0.868	0.80
99_H	102_T	0.867	0.80
57_G	106_V	0.863	0.80
176_V	250_F	0.861	0.80
63_K	66_S	0.852	0.79
182_R	205_N	0.849	0.79
291_F	321_F	0.846	0.78
372_L	384_V	0.846	0.78
33_V	40_H	0.845	0.78
81_L	96_K	0.843	0.78
307_F	346_L	0.842	0.78
372_L	376_N	0.840	0.78
226_V	398_I	0.840	0.78
55_I	126_V	0.840	0.78
21_I	45_V	0.835	0.77
216_V	350_L	0.833	0.77
293_K	334_R	0.831	0.77
186_V	200_Y	0.823	0.76
122_L	213_T	0.823	0.76
291_F	406_I	0.823	0.76
315_V	339_I	0.823	0.76
53_E	108_K	0.819	0.76
303_A	375_G	0.817	0.76
308_R	335_I	0.816	0.76
160_V	204_I	0.811	0.75
175_P	298_G	0.810	0.75
69_V	130_L	0.808	0.75
300_Q	381_A	0.808	0.75
375_G	379_T	0.806	0.75
221_D	239_S	0.805	0.75
33_V	36_Y	0.803	0.75
282_Y	342_E	0.802	0.74
230_S	304_P	0.801	0.74
168_G	222_S	0.799	0.74
389_Y	410_V	0.798	0.74
399_R	406_I	0.798	0.74
259_G	414_L	0.795	0.74
214_N	263_A	0.788	0.73
23_P	26_T	0.787	0.73
212_V	250_F	0.787	0.73
286_I	341_I	0.786	0.73
51_N	106_V	0.784	0.73
358_E	362_E	0.780	0.72
175_P	247_G	0.779	0.72
19_V	33_V	0.777	0.72
134_A	154_D	0.777	0.72
34_L	37_H	0.777	0.72
105_W	149_P	0.774	0.72
62_I	98_L	0.774	0.72
194_Q	199_S	0.774	0.72
248_V	332_D	0.773	0.72
300_Q	303_A	0.773	0.72
399_R	403_G	0.772	0.72
183_V	249_S	0.770	0.71
112_G	245_S	0.768	0.71
55_I	86_I	0.764	0.71
294_D	415_A	0.761	0.71
181_Y	198_I	0.759	0.70
176_V	338_L	0.759	0.70
157_G	203_F	0.758	0.70
216_V	252_V	0.758	0.70
269_V	272_D	0.756	0.70
66_S	97_L	0.756	0.70
19_V	39_S	0.750	0.69
242_T	245_S	0.744	0.69
240_L	243_L	0.743	0.69
76_T	93_G	0.741	0.69
108_K	146_D	0.740	0.68
170_L	174_D	0.740	0.68
325_M	330_N	0.739	0.68
360_L	363_L	0.739	0.68
102_T	370_G	0.735	0.68
301_P	317_K	0.735	0.68
200_Y	368_L	0.734	0.68
299_L	303_A	0.732	0.68
190_T	341_I	0.732	0.68
32_W	132_P	0.730	0.67
293_K	332_D	0.730	0.67
297_R	383_Y	0.729	0.67
68_D	91_N	0.725	0.67
281_L	340_R	0.723	0.67
22_F	374_T	0.722	0.67
109_P	115_G	0.722	0.67
164_S	197_N	0.720	0.66
158_I	212_V	0.720	0.66
45_V	148_P	0.719	0.66
358_E	361_G	0.719	0.66
221_D	225_A	0.713	0.66
24_I	27_A	0.713	0.66
110_Q	117_S	0.710	0.65
236_E	274_Q	0.710	0.65
258_L	312_L	0.709	0.65
32_W	102_T	0.709	0.65
175_P	182_R	0.709	0.65
271_Y	311_R	0.705	0.65
8_A	24_I	0.704	0.65
303_A	384_V	0.702	0.64
236_E	273_D	0.702	0.64
320_F	335_I	0.701	0.64
142_Y	176_V	0.700	0.64
158_I	264_P	0.699	0.64
355_D	358_E	0.699	0.64
222_S	239_S	0.699	0.64
357_V	400_E	0.699	0.64
212_V	217_R	0.698	0.64
225_A	228_L	0.697	0.64
29_I	113_R	0.696	0.64
376_N	381_A	0.694	0.63
87_K	101_D	0.693	0.63
77_L	245_S	0.692	0.63
248_V	312_L	0.692	0.63
73_E	116_I	0.691	0.63
203_F	207_P	0.688	0.63
57_G	178_F	0.688	0.63
16_W	259_G	0.686	0.63
11_Q	15_N	0.686	0.63
94_M	97_L	0.682	0.62
285_H	342_E	0.682	0.62
41_Q	376_N	0.681	0.62
292_F	384_V	0.679	0.62
98_L	132_P	0.676	0.61
85_E	242_T	0.675	0.61
69_V	81_L	0.673	0.61
296_V	384_V	0.671	0.61
301_P	316_S	0.669	0.61
63_K	127_Y	0.668	0.61
10_I	15_N	0.667	0.60
292_F	372_L	0.667	0.60
296_V	392_T	0.666	0.60
83_H	365_K	0.666	0.60
378_V	410_V	0.665	0.60
7_E	11_Q	0.665	0.60
332_D	366_R	0.665	0.60
170_L	200_Y	0.665	0.60
65_R	307_F	0.665	0.60
204_I	265_K	0.665	0.60
73_E	87_K	0.664	0.60
287_D	341_I	0.663	0.60
222_S	247_G	0.660	0.60
312_L	324_N	0.660	0.60
369_R	408_P	0.658	0.59
63_K	156_K	0.658	0.59
69_V	383_Y	0.658	0.59
58_G	332_D	0.656	0.59
135_K	211_L	0.655	0.59
298_G	369_R	0.654	0.59
8_A	12_K	0.653	0.59
72_V	128_I	0.652	0.59
204_I	335_I	0.651	0.59
223_G	250_F	0.650	0.58
341_I	358_E	0.650	0.58
109_P	124_S	0.649	0.58
152_P	187_E	0.647	0.58
166_K	238_G	0.646	0.58
201_Q	265_K	0.646	0.58
35_F	47_L	0.644	0.58
277_I	292_F	0.644	0.58
231_A	391_N	0.641	0.57
341_I	351_G	0.640	0.57
303_A	342_E	0.637	0.57
376_N	379_T	0.636	0.57
132_P	180_G	0.635	0.57
164_S	192_D	0.635	0.57
41_Q	44_E	0.633	0.56
66_S	241_T	0.633	0.56
207_P	298_G	0.633	0.56
170_L	301_P	0.632	0.56
299_L	318_V	0.630	0.56
158_I	204_I	0.629	0.56
227_D	396_T	0.626	0.56
253_P	259_G	0.625	0.55
229_T	268_F	0.625	0.55
97_L	132_P	0.624	0.55
323_P	330_N	0.624	0.55
21_I	286_I	0.623	0.55
368_L	388_F	0.623	0.55
107_V	121_T	0.622	0.55
65_R	131_Q	0.621	0.55
154_D	361_G	0.620	0.55
98_L	335_I	0.620	0.55
208_Y	290_M	0.617	0.55
123_L	211_L	0.615	0.54
139_M	202_L	0.615	0.54
11_Q	87_K	0.615	0.54
310_I	335_I	0.615	0.54
233_M	323_P	0.615	0.54
26_T	230_S	0.614	0.54
109_P	112_G	0.613	0.54
230_S	375_G	0.613	0.54
33_V	38_Y	0.613	0.54
273_D	331_D	0.612	0.54
333_Y	384_V	0.612	0.54
336_P	339_I	0.610	0.54
30_G	59_K	0.610	0.54
119_L	222_S	0.609	0.54
122_L	277_I	0.608	0.53
292_F	387_D	0.608	0.53
98_L	102_T	0.607	0.53
20_W	26_T	0.606	0.53
123_L	247_G	0.606	0.53
180_G	211_L	0.605	0.53
130_L	376_N	0.603	0.53
323_P	333_Y	0.603	0.53
203_F	206_A	0.602	0.53
176_V	265_K	0.601	0.53
51_N	108_K	0.601	0.53
127_Y	223_G	0.600	0.52
322_A	333_Y	0.600	0.52
11_Q	22_F	0.597	0.52
31_A	41_Q	0.596	0.52
109_P	174_D	0.596	0.52
103_V	235_V	0.596	0.52
41_Q	280_S	0.595	0.52
22_F	26_T	0.595	0.52
52_A	60_T	0.595	0.52
18_P	41_Q	0.592	0.52
74_S	91_N	0.592	0.52
51_N	126_V	0.590	0.51
213_T	335_I	0.590	0.51
21_I	335_I	0.589	0.51
224_I	256_L	0.589	0.51
16_W	25_V	0.588	0.51
34_L	274_Q	0.588	0.51
157_G	367_G	0.588	0.51
109_P	118_G	0.588	0.51
109_P	129_E	0.586	0.51
298_G	345_R	0.585	0.51
47_L	128_I	0.585	0.51
133_G	211_L	0.584	0.51
290_M	341_I	0.583	0.50
282_Y	345_R	0.582	0.50
290_M	388_F	0.582	0.50
401_F	406_I	0.582	0.50
30_G	192_D	0.580	0.50
94_M	130_L	0.580	0.50
52_A	222_S	0.579	0.50
7_E	10_I	0.578	0.50
16_W	375_G	0.574	0.49
83_H	273_D	0.574	0.49
138_K	312_L	0.573	0.49
74_S	95_E	0.573	0.49
96_K	233_M	0.573	0.49
56_E	61_T	0.572	0.49
32_W	38_Y	0.570	0.49
51_N	361_G	0.569	0.49
273_D	317_K	0.569	0.49
189_S	200_Y	0.569	0.49
398_I	410_V	0.569	0.49
88_A	142_Y	0.568	0.49
85_E	224_I	0.568	0.49
100_K	135_K	0.568	0.49
229_T	239_S	0.568	0.49
13_V	36_Y	0.567	0.49
105_W	157_G	0.567	0.49
308_R	388_F	0.566	0.48
10_I	14_K	0.566	0.48
182_R	321_F	0.566	0.48
92_S	140_D	0.565	0.48
273_D	343_P	0.564	0.48
210_R	332_D	0.563	0.48
229_T	232_G	0.563	0.48
37_H	71_V	0.563	0.48
331_D	362_E	0.563	0.48
22_F	362_E	0.562	0.48
188_T	335_I	0.562	0.48
109_P	191_F	0.561	0.48
288_Y	341_I	0.560	0.48
66_S	164_S	0.560	0.48
177_L	249_S	0.558	0.47
30_G	34_L	0.558	0.47
68_D	71_V	0.557	0.47
172_P	307_F	0.556	0.47
52_A	84_V	0.556	0.47
117_S	167_A	0.556	0.47
296_V	318_V	0.555	0.47
124_S	312_L	0.555	0.47
117_S	270_L	0.554	0.47
216_V	338_L	0.554	0.47
112_G	305_V	0.553	0.47
99_H	132_P	0.553	0.47
304_P	311_R	0.553	0.47
256_L	316_S	0.553	0.47
275_K	279_D	0.553	0.47
101_D	137_S	0.553	0.47
137_S	194_Q	0.553	0.47
45_V	61_T	0.552	0.47
266_T	269_V	0.551	0.47
12_K	39_S	0.551	0.47
192_D	337_V	0.550	0.46
239_S	242_T	0.549	0.46
8_A	11_Q	0.549	0.46
223_G	232_G	0.548	0.46
69_V	350_L	0.547	0.46
374_T	383_Y	0.547	0.46
121_T	247_G	0.546	0.46
8_A	97_L	0.546	0.46
268_F	384_V	0.546	0.46
29_I	45_V	0.546	0.46
166_K	218_F	0.545	0.46
102_T	312_L	0.545	0.46
189_S	212_V	0.544	0.46
167_A	238_G	0.542	0.46
60_T	211_L	0.542	0.46
27_A	33_V	0.541	0.45
150_L	187_E	0.540	0.45
110_Q	146_D	0.540	0.45
37_H	41_Q	0.539	0.45
52_A	56_E	0.537	0.45
99_H	138_K	0.537	0.45
31_A	257_D	0.537	0.45
114_E	134_A	0.537	0.45
240_L	294_D	0.537	0.45
158_I	261_P	0.534	0.45
321_F	334_R	0.534	0.45
217_R	243_L	0.533	0.44
8_A	283_T	0.532	0.44
161_I	199_S	0.532	0.44
56_E	120_G	0.532	0.44
414_L	417_I	0.532	0.44
11_Q	14_K	0.532	0.44
123_L	170_L	0.531	0.44
250_F	298_G	0.531	0.44
269_V	273_D	0.530	0.44
243_L	249_S	0.528	0.44
212_V	392_T	0.528	0.44
54_G	60_T	0.528	0.44
265_K	275_K	0.527	0.44
224_I	266_T	0.527	0.44
50_A	252_V	0.526	0.44
306_E	385_D	0.525	0.43
311_R	342_E	0.525	0.43
35_F	41_Q	0.525	0.43
159_R	209_D	0.525	0.43
150_L	161_I	0.525	0.43
140_D	229_T	0.524	0.43
230_S	247_G	0.524	0.43
115_G	241_T	0.523	0.43
275_K	382_L	0.522	0.43
398_I	414_L	0.521	0.43
24_I	28_L	0.521	0.43
69_V	319_P	0.521	0.43
89_R	414_L	0.520	0.43
109_P	294_D	0.520	0.43
336_P	341_I	0.520	0.43
80_D	83_H	0.519	0.43
186_V	221_D	0.519	0.43
166_K	225_A	0.518	0.43
124_S	248_V	0.518	0.43
155_A	243_L	0.517	0.43
339_I	409_T	0.517	0.43
385_D	388_F	0.516	0.42
100_K	289_L	0.514	0.42
65_R	172_P	0.513	0.42
131_Q	151_A	0.513	0.42
21_I	28_L	0.512	0.42
34_L	41_Q	0.512	0.42
238_G	242_T	0.512	0.42
172_P	188_T	0.511	0.42
21_I	141_K	0.510	0.42
69_V	172_P	0.510	0.42
19_V	393_P	0.509	0.42
193_T	235_V	0.509	0.42
128_I	151_A	0.509	0.42
301_P	304_P	0.509	0.42
51_N	144_L	0.509	0.42
40_H	355_D	0.508	0.41
147_S	188_T	0.507	0.41
149_P	157_G	0.507	0.41
295_S	298_G	0.505	0.41
161_I	267_A	0.503	0.41
8_A	14_K	0.502	0.41
36_Y	147_S	0.501	0.41
37_H	40_H	0.500	0.41
84_V	292_F	0.500	0.41

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2j5u_A	1	0.4429	17.3	0.977	Contact Map
2zz9_A	1	0.0905	12.3	0.979	Contact Map
2jd3_A	1	0.1786	10	0.98	Contact Map
2na6_A	1	0.0667	9	0.98	Contact Map
3iyz_A	1	0.0905	8.5	0.98	Contact Map
1v7w_A	1	0.2024	7.3	0.981	Contact Map
2m8r_A	1	0.1	7.3	0.981	Contact Map
4fvy_A	1	0.1381	6.9	0.981	Contact Map
4b96_A	1	0.2976	5.1	0.982	Contact Map
1rl2_A	1	0.2524	4.1	0.983	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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