T0886_FULL_1_474 - CASP12 - GREMLIN Contacts

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T0886_FULL_1_474 - T0886_FULL 1-474

ID:	35	Sequences: MAGISIGVGSTDYTDLVNKMVNLEGAAKTNQLATLEKTTTTRLTALGQFKSAISAFQTALTALNSNAVFMARTAKSSNEDILKASATQSAVAGTYQIQVNSLATSSKIALQAIADPANAKFNSGTLNISVGDTKLPAITVDSSNNTLAGMRDAINQAGKEAGVSATIITDNSGSRLVLSSTKTGDGKDIKVEVSDDGSGGNTSLSQLAFDPATAPKLSDGAAAGYVTKAANGEITVDGLKRSIASNSVSDVIDGVSFDVKAVTEAGKPITLTVSRDDAGVKDNVKKFVEAYNTLTKFINEQTVVTKVGEDKNPVTGALLGDASVRALVNTMRSELIASNENGSVRNLAALGITTTKDGTLEIDEKKLDKAISADFEGVASYFTGDTGLAKRLGDKMKPYTDAQGILDQRTTTLQKTLSNVDTQKADLAKRLAALQEKLTTQFNLLSAMQDEMTKRQKSITDNLASLPYGSGKKT	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_10
Length:	474 (439)
Sequences:	3421 (2684)
Seq/√Len:	128.1

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
101_S	233_E	4.761	1.00
231_N	242_S	4.621	1.00
12_D	15_D	4.148	1.00
101_S	230_A	4.081	1.00
281_K	368_D	3.482	1.00
285_K	289_E	3.141	1.00
233_E	240_K	3.073	1.00
107_K	237_D	3.070	1.00
374_D	377_G	3.014	1.00
98_Q	235_T	2.965	1.00
234_I	248_V	2.895	1.00
362_I	367_L	2.753	1.00
296_K	359_T	2.706	1.00
145_N	153_A	2.698	1.00
282_D	286_K	2.556	1.00
435_Q	439_T	2.540	1.00
363_D	366_K	2.492	1.00
350_L	381_Y	2.484	1.00
104_T	230_A	2.474	1.00
285_K	364_E	2.464	1.00
100_N	233_E	2.456	1.00
145_N	149_G	2.443	1.00
25_G	428_A	2.429	1.00
248_V	259_V	2.414	1.00
243_I	250_D	2.403	1.00
369_K	373_A	2.398	1.00
151_R	167_I	2.330	1.00
233_E	242_S	2.236	1.00
234_I	241_R	2.229	1.00
15_D	19_K	2.206	1.00
56_F	294_L	2.205	1.00
355_T	361_E	2.201	1.00
428_A	432_A	2.168	1.00
231_N	244_A	2.145	1.00
285_K	362_I	2.108	1.00
81_I	263_T	2.106	1.00
235_T	240_K	2.076	1.00
13_Y	17_V	2.056	1.00
355_T	359_T	2.039	1.00
445_L	449_Q	2.037	1.00
14_T	439_T	2.011	1.00
247_S	258_D	1.997	1.00
437_K	441_Q	1.970	1.00
52_A	297_F	1.970	1.00
36_E	421_D	1.942	1.00
94_T	272_T	1.939	1.00
263_T	269_I	1.934	1.00
59_A	290_A	1.917	1.00
32_L	420_V	1.907	1.00
281_K	364_E	1.905	1.00
381_Y	388_L	1.903	1.00
458_S	462_N	1.900	1.00
21_V	431_L	1.896	1.00
154_I	178_L	1.895	1.00
284_V	367_L	1.890	1.00
144_N	149_G	1.885	1.00
82_L	97_I	1.854	1.00
82_L	271_L	1.851	1.00
164_S	181_T	1.835	1.00
21_V	434_L	1.829	1.00
296_K	300_E	1.783	1.00
434_L	437_K	1.782	1.00
125_T	137_A	1.765	1.00
100_N	235_T	1.742	1.00
82_L	269_I	1.741	1.00
367_L	371_I	1.710	1.00
149_G	153_A	1.701	1.00
289_E	293_T	1.694	1.00
29_T	33_A	1.689	1.00
39_T	413_L	1.677	1.00
438_L	442_F	1.655	1.00
170_D	175_R	1.650	1.00
43_L	413_L	1.643	1.00
19_K	22_N	1.634	1.00
345_R	349_A	1.633	1.00
167_I	174_S	1.628	1.00
105_S	183_T	1.622	1.00
6_I	9_G	1.622	1.00
297_F	301_Q	1.612	1.00
53_I	396_M	1.609	1.00
24_E	434_L	1.600	1.00
148_A	152_D	1.600	1.00
432_A	436_E	1.593	1.00
100_N	240_K	1.579	1.00
127_N	137_A	1.574	1.00
18_N	22_N	1.571	1.00
44_T	47_G	1.553	1.00
106_S	189_I	1.549	1.00
434_L	438_L	1.549	1.00
77_S	269_I	1.542	1.00
316_G	319_L	1.539	1.00
25_G	431_L	1.526	1.00
225_Y	228_K	1.516	1.00
78_N	261_A	1.482	1.00
95_Y	237_D	1.477	1.00
284_V	362_I	1.472	1.00
154_I	165_A	1.464	1.00
72_R	86_A	1.464	1.00
288_V	362_I	1.461	1.00
141_D	144_N	1.461	1.00
78_N	81_I	1.451	1.00
346_N	349_A	1.450	1.00
74_A	84_A	1.449	1.00
458_S	461_D	1.446	1.00
248_V	257_F	1.445	1.00
422_T	426_D	1.440	1.00
68_V	283_N	1.434	1.00
84_A	271_L	1.432	1.00
33_A	424_K	1.430	1.00
102_L	259_V	1.430	1.00
321_D	409_R	1.429	1.00
60_L	392_L	1.416	1.00
278_A	282_D	1.399	1.00
73_T	274_S	1.390	1.00
36_E	424_K	1.388	1.00
136_P	161_A	1.387	1.00
178_L	191_V	1.382	1.00
421_D	425_A	1.381	1.00
252_I	255_V	1.380	1.00
52_A	293_T	1.373	1.00
83_K	260_K	1.373	1.00
23_L	26_A	1.371	1.00
436_E	440_T	1.357	1.00
125_T	139_T	1.346	1.00
281_K	285_K	1.337	1.00
45_A	301_Q	1.336	1.00
127_N	135_L	1.332	1.00
98_Q	263_T	1.331	1.00
13_Y	446_S	1.319	1.00
304_V	313_P	1.319	1.00
286_K	289_E	1.305	1.00
302_T	324_V	1.305	1.00
440_T	444_L	1.304	1.00
81_I	261_A	1.304	1.00
278_A	368_D	1.298	1.00
14_T	18_N	1.291	1.00
327_L	399_Y	1.258	1.00
140_V	150_M	1.256	1.00
243_I	248_V	1.256	1.00
97_I	236_V	1.251	1.00
354_T	360_L	1.250	1.00
263_T	266_G	1.250	1.00
427_L	431_L	1.245	1.00
40_T	417_L	1.238	1.00
443_N	447_A	1.238	1.00
397_K	401_D	1.233	1.00
39_T	417_L	1.233	1.00
414_Q	418_S	1.231	1.00
294_L	298_I	1.229	1.00
39_T	416_T	1.222	0.99
463_L	466_L	1.219	0.99
295_T	328_V	1.215	0.99
72_R	92_A	1.204	0.99
33_A	36_E	1.203	0.99
234_I	259_V	1.202	0.99
169_T	174_S	1.202	0.99
353_T	363_D	1.200	0.99
364_E	368_D	1.192	0.99
10_S	446_S	1.186	0.99
35_L	423_Q	1.185	0.99
108_I	225_Y	1.182	0.99
43_L	47_G	1.174	0.99
146_T	149_G	1.171	0.99
129_S	190_K	1.166	0.99
11_T	445_L	1.163	0.99
59_A	62_A	1.161	0.99
290_A	293_T	1.155	0.99
280_V	375_F	1.146	0.99
449_Q	453_T	1.143	0.99
407_D	411_T	1.142	0.99
20_M	442_F	1.134	0.99
453_T	457_K	1.132	0.99
368_D	372_S	1.132	0.99
38_T	42_R	1.132	0.99
17_V	21_V	1.129	0.99
43_L	414_Q	1.126	0.99
403_Q	407_D	1.119	0.99
295_T	359_T	1.119	0.99
234_I	240_K	1.116	0.99
248_V	251_V	1.110	0.99
371_I	378_V	1.109	0.99
54_S	57_Q	1.102	0.99
283_N	286_K	1.100	0.99
62_A	286_K	1.097	0.99
84_A	257_F	1.096	0.99
394_D	397_K	1.093	0.99
98_Q	265_A	1.093	0.99
284_V	382_F	1.092	0.99
108_I	189_I	1.092	0.99
415_K	418_S	1.092	0.99
282_D	285_K	1.092	0.99
304_V	308_G	1.087	0.99
18_N	435_Q	1.087	0.99
401_D	407_D	1.086	0.99
232_G	259_V	1.084	0.99
75_K	274_S	1.083	0.99
21_V	435_Q	1.076	0.99
426_D	429_K	1.073	0.99
298_I	324_V	1.067	0.99
11_T	16_L	1.067	0.99
429_K	432_A	1.067	0.99
230_A	233_E	1.065	0.99
376_E	380_S	1.064	0.99
347_L	352_I	1.061	0.99
7_G	10_S	1.054	0.98
236_V	241_R	1.053	0.98
352_I	360_L	1.051	0.98
32_L	427_L	1.051	0.98
43_L	417_L	1.050	0.98
97_I	271_L	1.043	0.98
82_L	257_F	1.041	0.98
25_G	29_T	1.038	0.98
127_N	194_S	1.035	0.98
419_N	423_Q	1.025	0.98
232_G	246_N	1.021	0.98
280_V	283_N	1.020	0.98
140_V	145_N	1.019	0.98
165_A	178_L	1.017	0.98
13_Y	445_L	1.015	0.98
147_L	167_I	1.013	0.98
62_A	283_N	1.013	0.98
350_L	378_V	1.011	0.98
102_L	262_V	1.011	0.98
460_T	464_A	1.008	0.98
170_D	173_G	1.005	0.98
129_S	135_L	1.004	0.98
429_K	433_A	0.993	0.98
20_M	24_E	0.992	0.98
432_A	435_Q	0.992	0.98
83_K	258_D	0.990	0.98
140_V	153_A	0.988	0.98
431_L	435_Q	0.988	0.98
304_V	319_L	0.983	0.98
129_S	132_D	0.982	0.98
453_T	456_Q	0.981	0.98
152_D	156_Q	0.980	0.98
412_T	416_T	0.979	0.98
372_S	375_F	0.978	0.98
104_T	262_V	0.976	0.98
422_T	425_A	0.974	0.97
49_F	301_Q	0.973	0.97
148_A	167_I	0.972	0.97
234_I	243_I	0.970	0.97
297_F	300_E	0.965	0.97
76_S	79_E	0.965	0.97
73_T	276_D	0.964	0.97
96_Q	270_T	0.963	0.97
36_E	417_L	0.963	0.97
36_E	40_T	0.962	0.97
55_A	293_T	0.955	0.97
277_D	372_S	0.955	0.97
305_T	313_P	0.952	0.97
7_G	446_S	0.949	0.97
236_V	251_V	0.949	0.97
187_K	229_A	0.947	0.97
146_T	150_M	0.947	0.97
276_D	279_G	0.947	0.97
100_N	234_I	0.946	0.97
288_V	367_L	0.944	0.97
187_K	244_A	0.939	0.97
195_D	198_S	0.938	0.97
281_K	362_I	0.935	0.97
17_V	435_Q	0.934	0.97
39_T	43_L	0.930	0.97
334_E	395_K	0.929	0.97
32_L	424_K	0.929	0.97
425_A	428_A	0.928	0.97
457_K	460_T	0.926	0.97
36_E	420_V	0.924	0.97
57_Q	393_G	0.923	0.97
101_S	262_V	0.922	0.96
279_G	282_D	0.920	0.96
305_T	308_G	0.918	0.96
418_S	422_T	0.918	0.96
55_A	290_A	0.914	0.96
423_Q	426_D	0.912	0.96
411_T	415_K	0.910	0.96
370_A	378_V	0.910	0.96
5_S	9_G	0.901	0.96
80_D	261_A	0.900	0.96
53_I	294_L	0.897	0.96
59_A	286_K	0.895	0.96
37_K	41_T	0.889	0.96
280_V	371_I	0.883	0.96
241_R	251_V	0.882	0.95
335_L	360_L	0.880	0.95
193_V	196_D	0.879	0.95
369_K	372_S	0.875	0.95
145_N	150_M	0.874	0.95
344_V	350_L	0.868	0.95
141_D	149_G	0.866	0.95
109_A	226_V	0.859	0.95
348_A	353_T	0.858	0.95
74_A	86_A	0.854	0.95
69_F	382_F	0.851	0.95
141_D	145_N	0.851	0.95
58_T	61_T	0.849	0.94
151_R	165_A	0.849	0.94
293_T	297_F	0.848	0.94
76_S	81_I	0.846	0.94
128_I	138_I	0.842	0.94
298_I	301_Q	0.842	0.94
61_T	393_G	0.840	0.94
186_G	244_A	0.839	0.94
5_S	8_V	0.837	0.94
47_G	50_K	0.837	0.94
425_A	429_K	0.834	0.94
16_L	442_F	0.833	0.94
445_L	448_M	0.831	0.94
49_F	327_L	0.830	0.94
182_K	187_K	0.830	0.94
50_K	54_S	0.829	0.94
330_T	395_K	0.828	0.94
295_T	299_N	0.826	0.94
27_A	430_R	0.825	0.94
9_G	446_S	0.824	0.94
85_S	256_S	0.823	0.93
334_E	391_R	0.819	0.93
279_G	283_N	0.818	0.93
288_V	352_I	0.816	0.93
95_Y	273_V	0.815	0.93
395_K	399_Y	0.814	0.93
73_T	278_A	0.813	0.93
17_V	443_N	0.812	0.93
25_G	28_K	0.809	0.93
410_T	414_Q	0.809	0.93
21_V	25_G	0.808	0.93
28_K	427_L	0.807	0.93
26_A	30_N	0.805	0.93
365_K	369_K	0.805	0.93
49_F	324_V	0.801	0.93
278_A	281_K	0.800	0.93
58_T	62_A	0.799	0.92
19_K	23_L	0.798	0.92
23_L	27_A	0.795	0.92
98_Q	264_E	0.790	0.92
52_A	55_A	0.789	0.92
43_L	410_T	0.785	0.92
106_S	225_Y	0.782	0.92
185_D	188_D	0.780	0.92
417_L	421_D	0.779	0.91
418_S	421_D	0.777	0.91
28_K	428_A	0.773	0.91
129_S	192_E	0.773	0.91
366_K	369_K	0.772	0.91
151_R	176_L	0.771	0.91
377_G	380_S	0.770	0.91
19_K	24_E	0.766	0.91
21_V	427_L	0.766	0.91
232_G	248_V	0.766	0.91
104_T	227_T	0.765	0.91
298_I	328_V	0.761	0.91
327_L	395_K	0.761	0.91
47_G	51_S	0.759	0.90
108_I	223_A	0.759	0.90
29_T	424_K	0.758	0.90
328_V	332_R	0.754	0.90
140_V	144_N	0.752	0.90
21_V	24_E	0.751	0.90
433_A	436_E	0.749	0.90
190_K	210_D	0.748	0.90
337_A	391_R	0.747	0.90
436_E	439_T	0.743	0.89
448_M	451_E	0.742	0.89
52_A	294_L	0.741	0.89
448_M	452_M	0.739	0.89
399_Y	405_I	0.739	0.89
26_A	29_T	0.738	0.89
185_D	244_A	0.737	0.89
110_L	223_A	0.737	0.89
90_A	255_V	0.737	0.89
291_Y	295_T	0.736	0.89
42_R	416_T	0.736	0.89
171_N	174_S	0.734	0.89
22_N	26_A	0.732	0.89
167_I	176_L	0.732	0.89
255_V	273_V	0.728	0.89
243_I	249_S	0.728	0.89
186_G	231_N	0.727	0.88
288_V	292_N	0.725	0.88
149_G	152_D	0.725	0.88
136_P	159_K	0.723	0.88
123_S	145_N	0.722	0.88
79_E	83_K	0.722	0.88
106_S	229_A	0.722	0.88
49_F	298_I	0.719	0.88
446_S	449_Q	0.712	0.87
455_R	458_S	0.711	0.87
64_N	393_G	0.710	0.87
106_S	188_D	0.710	0.87
243_I	259_V	0.709	0.87
97_I	250_D	0.709	0.87
34_T	37_K	0.708	0.87
232_G	243_I	0.707	0.87
128_I	161_A	0.705	0.87
72_R	275_R	0.705	0.87
431_L	434_L	0.705	0.87
353_T	361_E	0.703	0.87
185_D	231_N	0.703	0.87
288_V	360_L	0.703	0.87
28_K	424_K	0.702	0.87
393_G	397_K	0.701	0.87
259_V	262_V	0.699	0.86
438_L	441_Q	0.697	0.86
257_F	271_L	0.695	0.86
45_A	317_A	0.694	0.86
344_V	370_A	0.694	0.86
76_S	269_I	0.693	0.86
20_M	23_L	0.692	0.86
101_S	104_T	0.691	0.86
331_M	360_L	0.691	0.86
282_D	289_E	0.687	0.85
357_D	361_E	0.684	0.85
234_I	257_F	0.684	0.85
262_V	266_G	0.684	0.85
325_R	329_N	0.683	0.85
188_D	229_A	0.682	0.85
449_Q	456_Q	0.682	0.85
128_I	136_P	0.681	0.85
300_E	303_V	0.679	0.85
447_A	451_E	0.678	0.85
24_E	27_A	0.678	0.85
71_A	279_G	0.676	0.85
14_T	435_Q	0.676	0.85
182_K	245_S	0.673	0.84
445_L	452_M	0.673	0.84
455_R	462_N	0.673	0.84
85_S	258_D	0.673	0.84
416_T	419_N	0.672	0.84
277_D	368_D	0.672	0.84
48_Q	297_F	0.671	0.84
442_F	452_M	0.670	0.84
123_S	144_N	0.667	0.84
339_N	388_L	0.666	0.84
462_N	466_L	0.666	0.84
57_Q	61_T	0.665	0.84
95_Y	257_F	0.664	0.83
53_I	406_L	0.662	0.83
19_K	25_G	0.661	0.83
94_T	270_T	0.661	0.83
17_V	439_T	0.660	0.83
444_L	448_M	0.660	0.83
376_E	379_A	0.660	0.83
56_F	290_A	0.659	0.83
452_M	456_Q	0.659	0.83
32_L	36_E	0.658	0.83
150_M	207_L	0.658	0.83
415_K	419_N	0.658	0.83
299_N	328_V	0.657	0.83
366_K	370_A	0.656	0.83
419_N	422_T	0.656	0.83
68_V	71_A	0.656	0.83
41_T	317_A	0.655	0.83
71_A	283_N	0.654	0.83
46_L	324_V	0.651	0.82
21_V	28_K	0.650	0.82
83_K	86_A	0.650	0.82
123_S	142_S	0.648	0.82
81_I	269_I	0.648	0.82
439_T	443_N	0.646	0.82
65_S	68_V	0.645	0.82
60_L	396_M	0.643	0.82
50_K	410_T	0.642	0.81
54_S	58_T	0.641	0.81
76_S	82_L	0.641	0.81
150_M	154_I	0.641	0.81
180_S	229_A	0.639	0.81
162_G	181_T	0.634	0.81
61_T	397_K	0.634	0.81
298_I	327_L	0.634	0.81
144_N	153_A	0.634	0.81
34_T	38_T	0.632	0.80
13_Y	439_T	0.632	0.80
305_T	314_V	0.631	0.80
123_S	149_G	0.631	0.80
128_I	163_V	0.630	0.80
50_K	400_T	0.628	0.80
387_G	391_R	0.627	0.80
130_V	133_T	0.626	0.80
56_F	388_L	0.626	0.80
324_V	328_V	0.625	0.80
128_I	191_V	0.625	0.80
111_Q	224_G	0.624	0.80
10_S	453_T	0.623	0.79
33_A	37_K	0.623	0.79
459_I	463_L	0.623	0.79
106_S	180_S	0.622	0.79
27_A	427_L	0.622	0.79
333_S	337_A	0.622	0.79
394_D	398_P	0.620	0.79
16_L	20_M	0.620	0.79
80_D	260_K	0.620	0.79
452_M	455_R	0.620	0.79
420_V	424_K	0.619	0.79
97_I	234_I	0.617	0.79
142_S	145_N	0.617	0.79
74_A	255_V	0.615	0.79
106_S	228_K	0.615	0.79
25_G	435_Q	0.615	0.79
30_N	34_T	0.614	0.78
57_Q	397_K	0.614	0.78
21_V	26_A	0.614	0.78
462_N	465_S	0.613	0.78
53_I	327_L	0.612	0.78
86_A	90_A	0.611	0.78
46_L	321_D	0.610	0.78
410_T	413_L	0.609	0.78
110_L	224_G	0.609	0.78
155_N	178_L	0.609	0.78
110_L	113_I	0.608	0.78
109_A	175_R	0.608	0.78
344_V	381_Y	0.607	0.78
382_F	387_G	0.607	0.78
123_S	141_D	0.605	0.77
386_T	394_D	0.605	0.77
84_A	255_V	0.604	0.77
426_D	430_R	0.604	0.77
365_K	368_D	0.603	0.77
17_V	431_L	0.603	0.77
76_S	271_L	0.602	0.77
424_K	428_A	0.602	0.77
14_T	17_V	0.602	0.77
49_F	318_L	0.600	0.77
29_T	431_L	0.599	0.77
74_A	271_L	0.598	0.77
396_M	399_Y	0.596	0.76
243_I	251_V	0.596	0.76
333_S	336_I	0.596	0.76
284_V	352_I	0.593	0.76
43_L	46_L	0.593	0.76
421_D	424_K	0.592	0.76
163_V	178_L	0.589	0.76
384_G	390_K	0.589	0.76
90_A	273_V	0.588	0.75
50_K	407_D	0.586	0.75
23_L	434_L	0.585	0.75
291_Y	360_L	0.585	0.75
39_T	420_V	0.582	0.75
250_D	253_D	0.580	0.74
185_D	242_S	0.579	0.74
61_T	64_N	0.578	0.74
155_N	165_A	0.578	0.74
339_N	391_R	0.578	0.74
27_A	435_Q	0.576	0.74
177_V	237_D	0.576	0.74
379_A	383_T	0.576	0.74
325_R	328_V	0.576	0.74
124_G	131_G	0.575	0.74
173_G	243_I	0.574	0.74
331_M	392_L	0.574	0.74
349_A	370_A	0.573	0.74
361_E	365_K	0.572	0.73
251_V	257_F	0.572	0.73
299_N	359_T	0.572	0.73
55_A	58_T	0.571	0.73
352_I	362_I	0.571	0.73
48_Q	52_A	0.570	0.73
239_L	291_Y	0.568	0.73
302_T	320_G	0.566	0.73
37_K	40_T	0.565	0.73
397_K	400_T	0.565	0.73
248_V	258_D	0.564	0.72
21_V	27_A	0.564	0.72
285_K	368_D	0.562	0.72
121_F	124_G	0.561	0.72
370_A	373_A	0.557	0.71
338_S	346_N	0.557	0.71
424_K	446_S	0.556	0.71
19_K	442_F	0.556	0.71
424_K	427_L	0.555	0.71
348_A	354_T	0.555	0.71
49_F	297_F	0.554	0.71
459_I	462_N	0.554	0.71
304_V	315_T	0.552	0.71
100_N	262_V	0.549	0.70
35_L	38_T	0.549	0.70
396_M	400_T	0.548	0.70
54_S	400_T	0.548	0.70
82_L	263_T	0.546	0.70
333_S	352_I	0.543	0.70
107_K	179_S	0.543	0.70
463_L	467_P	0.542	0.69
170_D	239_L	0.542	0.69
380_S	384_G	0.542	0.69
184_G	231_N	0.540	0.69
29_T	34_T	0.539	0.69
27_A	32_L	0.539	0.69
28_K	431_L	0.539	0.69
302_T	319_L	0.539	0.69
40_T	43_L	0.539	0.69
96_Q	104_T	0.538	0.69
232_G	245_S	0.537	0.69
79_E	260_K	0.536	0.69
398_P	401_D	0.535	0.68
35_L	39_T	0.534	0.68
304_V	314_V	0.534	0.68
13_Y	18_N	0.534	0.68
330_T	334_E	0.533	0.68
438_L	452_M	0.533	0.68
13_Y	332_R	0.533	0.68
81_I	260_K	0.532	0.68
22_N	25_G	0.532	0.68
21_V	438_L	0.532	0.68
95_Y	239_L	0.531	0.68
355_T	360_L	0.531	0.68
433_A	437_K	0.531	0.68
447_A	450_D	0.531	0.68
193_V	197_G	0.530	0.68
46_L	318_L	0.530	0.68
97_I	392_L	0.530	0.68
295_T	332_R	0.527	0.67
82_L	234_I	0.527	0.67
62_A	65_S	0.526	0.67
183_T	244_A	0.526	0.67
77_S	82_L	0.525	0.67
193_V	208_A	0.523	0.67
308_G	314_V	0.523	0.67
105_S	180_S	0.523	0.67
101_S	242_S	0.523	0.67
108_I	209_F	0.522	0.67
423_Q	427_L	0.520	0.66
60_L	389_A	0.520	0.66
107_K	177_V	0.520	0.66
287_F	335_L	0.518	0.66
456_Q	460_T	0.517	0.66
72_R	273_V	0.516	0.66
353_T	366_K	0.515	0.66
168_I	177_V	0.514	0.65
138_I	161_A	0.514	0.65
234_I	251_V	0.512	0.65
60_L	68_V	0.512	0.65
430_R	434_L	0.511	0.65
442_F	449_Q	0.510	0.65
446_S	450_D	0.509	0.65
308_G	315_T	0.509	0.65
434_L	439_T	0.509	0.65
338_S	391_R	0.509	0.65
183_T	231_N	0.508	0.64
115_D	146_T	0.508	0.64
69_F	383_T	0.507	0.64
19_K	54_S	0.506	0.64
169_T	243_I	0.506	0.64
349_A	366_K	0.505	0.64
72_R	89_S	0.504	0.64
172_S	242_S	0.503	0.64
57_Q	400_T	0.503	0.64
350_L	354_T	0.503	0.64
56_F	60_L	0.502	0.64
287_F	360_L	0.502	0.64
386_T	391_R	0.502	0.64
366_K	418_S	0.502	0.64
301_Q	317_A	0.501	0.63
17_V	438_L	0.501	0.63
439_T	445_L	0.501	0.63
116_P	148_A	0.501	0.63
16_L	19_K	0.500	0.63
97_I	257_F	0.500	0.63
252_I	257_F	0.500	0.63

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
5bu8_A	1	0.0274	86.5	0.954	Contact Map
3c9i_A	1	0.3017	75.9	0.959	Contact Map
2yy0_A	1	0.0802	52.5	0.965	Contact Map
2z5i_A	1	0.1034	42.6	0.967	Contact Map
4lin_A	1	0.3249	42.5	0.967	Contact Map
4cgk_A	1	0.1941	39.5	0.967	Contact Map
3ghg_C	1	0.2321	34.4	0.968	Contact Map
1lwu_C	1	0.1329	32.5	0.969	Contact Map
3ci9_A	1	0.0928	24.4	0.971	Contact Map
3q8t_A	1	0.1814	23.8	0.971	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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