T0942_c75_1_487 - CASP12 - GREMLIN Contacts

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T0942_c75_1_487 - T0942_c75 1-487

ID:	138	Sequences: MFRQLKKNLVATLIAAMTIGQVAPAFADSADTLPDMGTSAGSTLSIGQEMQMGDYYVRQLRGSAPLINDPLLTQYINSLGMRLVSHANSVKTPFHFFLINNDEINAFAFFGGNVVLHSALFRYSDNESQLASVMAHEISHVTQRHLARAMEDQQRSAPLTWVGALGSILLAMASPQAGMAALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRSGFDPQAMPTFLEKLLDQARYSSRPPEILLTHPLPESRLADARNRANQMRPMVVQSSEDFYLAKARTLGMYNSGRNQLTSDLLDEWAKGNVRQQRAAQYGRALQAMEANKYDEARKTLQPLLAAEPGNAWYLDLATDIDLGQNKANEAINRLKNARDLRTNPVLQLNLANAYLQGGQPQEAANILNRYTFNNKDDSNGWDLLAQAEAALNNRDQELAARAEGYALAGRLDQAISLLSSASSQVKLGSLQQARYDARIDQLRQLQERFKPYTKM	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_10
Length:	487 (417)
Sequences:	3839 (2751)
Seq/√Len:	134.7

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
358_K	361_E	5.753	1.00
324_K	327_E	5.230	1.00
391_Q	394_E	4.221	1.00
129_Q	224_T	4.121	1.00
125_D	228_K	3.886	1.00
425_N	428_Q	3.840	1.00
382_L	386_Y	3.194	1.00
333_Q	349_A	3.117	1.00
367_K	394_E	2.891	1.00
435_E	470_R	2.772	1.00
312_Q	331_T	2.765	1.00
227_E	257_R	2.751	1.00
132_S	221_A	2.736	1.00
194_I	197_T	2.733	1.00
413_W	432_A	2.618	1.00
442_R	445_Q	2.558	1.00
363_I	382_L	2.555	1.00
163_G	185_T	2.547	1.00
116_L	134_M	2.457	1.00
103_E	117_H	2.444	1.00
129_Q	228_K	2.433	1.00
329_R	353_D	2.374	1.00
83_L	138_I	2.319	1.00
434_A	450_L	2.317	1.00
363_I	385_A	2.313	1.00
309_R	345_Y	2.269	1.00
124_S	130_L	2.269	1.00
319_A	327_E	2.237	1.00
312_Q	338_A	2.218	1.00
396_A	419_A	2.214	1.00
393_Q	423_L	2.210	1.00
366_L	381_N	2.164	1.00
368_N	371_D	2.150	1.00
339_E	342_N	2.148	1.00
80_G	96_F	2.145	1.00
76_I	98_L	2.124	1.00
367_K	382_L	2.096	1.00
210_Q	214_R	2.057	1.00
354_L	385_A	2.049	1.00
223_P	256_A	2.044	1.00
121_F	130_L	2.027	1.00
241_E	251_S	2.022	1.00
128_S	221_A	2.013	1.00
396_A	420_E	1.990	1.00
272_E	276_L	1.989	1.00
312_Q	334_P	1.982	1.00
396_A	423_L	1.964	1.00
80_G	134_M	1.954	1.00
379_Q	398_I	1.919	1.00
239_P	244_L	1.895	1.00
191_Q	195_S	1.868	1.00
132_S	222_M	1.853	1.00
420_E	425_N	1.838	1.00
101_N	117_H	1.838	1.00
142_T	211_V	1.836	1.00
403_T	412_G	1.816	1.00
139_S	211_V	1.813	1.00
336_L	349_A	1.765	1.00
396_A	416_L	1.755	1.00
319_A	324_K	1.743	1.00
125_D	129_Q	1.733	1.00
353_D	361_E	1.712	1.00
336_L	346_L	1.704	1.00
83_L	211_V	1.663	1.00
451_S	475_R	1.656	1.00
79_L	217_F	1.654	1.00
353_D	365_R	1.646	1.00
315_R	319_A	1.645	1.00
295_D	299_E	1.640	1.00
370_R	378_L	1.637	1.00
319_A	331_T	1.636	1.00
72_L	98_L	1.633	1.00
202_Q	251_S	1.626	1.00
351_D	355_G	1.608	1.00
208_G	222_M	1.600	1.00
65_P	100_N	1.596	1.00
329_R	349_A	1.591	1.00
386_Y	398_I	1.582	1.00
181_A	184_G	1.580	1.00
278_K	282_L	1.571	1.00
199_Q	202_Q	1.567	1.00
87_A	90_V	1.556	1.00
135_A	212_L	1.552	1.00
418_Q	422_A	1.547	1.00
329_R	356_Q	1.546	1.00
386_Y	394_E	1.545	1.00
86_H	215_S	1.541	1.00
349_A	365_R	1.541	1.00
430_L	449_L	1.527	1.00
84_V	138_I	1.518	1.00
387_L	419_A	1.510	1.00
454_S	468_D	1.506	1.00
120_L	133_V	1.487	1.00
271_S	275_Y	1.480	1.00
295_D	314_G	1.456	1.00
349_A	353_D	1.454	1.00
447_I	471_I	1.436	1.00
257_R	261_N	1.432	1.00
216_G	265_P	1.424	1.00
209_I	256_A	1.410	1.00
353_D	358_K	1.397	1.00
420_E	428_Q	1.387	1.00
350_T	366_L	1.384	1.00
320_M	352_I	1.384	1.00
97_F	115_V	1.369	1.00
124_S	274_F	1.367	1.00
363_I	389_G	1.366	1.00
291_Q	295_D	1.364	1.00
400_N	416_L	1.347	1.00
430_L	452_S	1.343	1.00
292_L	318_Q	1.341	1.00
72_L	275_Y	1.337	1.00
167_S	182_L	1.329	1.00
186_L	190_R	1.326	1.00
436_G	440_A	1.325	1.00
329_R	333_Q	1.323	1.00
329_R	352_I	1.320	1.00
131_A	217_F	1.316	1.00
190_R	193_M	1.311	1.00
143_Q	207_I	1.294	1.00
149_A	200_N	1.293	1.00
124_S	225_F	1.288	1.00
392_P	422_A	1.285	1.00
70_P	375_N	1.284	1.00
310_A	314_G	1.282	1.00
333_Q	337_A	1.272	1.00
361_E	364_N	1.272	1.00
84_V	114_V	1.263	1.00
334_P	337_A	1.258	1.00
309_R	338_A	1.253	1.00
167_S	178_G	1.251	1.00
400_N	420_E	1.246	1.00
272_E	275_Y	1.245	1.00
275_Y	278_K	1.243	1.00
226_L	256_A	1.236	1.00
305_V	308_Q	1.236	1.00
331_T	334_P	1.226	1.00
275_Y	279_A	1.221	1.00
206_R	255_D	1.209	1.00
383_A	399_L	1.203	1.00
296_L	327_E	1.202	1.00
75_Y	79_L	1.198	1.00
75_Y	277_A	1.182	0.99
269_Q	272_E	1.168	0.99
468_D	472_D	1.167	0.99
438_A	477_L	1.166	0.99
359_A	385_A	1.161	0.99
220_Q	261_N	1.160	0.99
94_F	142_T	1.158	0.99
461_S	465_A	1.155	0.99
316_A	332_L	1.152	0.99
109_F	146_L	1.150	0.99
270_S	274_F	1.148	0.99
292_L	315_R	1.147	0.99
126_N	129_Q	1.146	0.99
180_A	184_G	1.145	0.99
382_L	398_I	1.141	0.99
171_A	178_G	1.140	0.99
359_A	362_A	1.133	0.99
175_P	178_G	1.130	0.99
72_L	277_A	1.125	0.99
96_F	138_I	1.116	0.99
224_T	228_K	1.111	0.99
197_T	200_N	1.110	0.99
166_G	170_L	1.106	0.99
176_Q	179_M	1.103	0.99
133_V	225_F	1.102	0.99
346_L	365_R	1.100	0.99
339_E	345_Y	1.097	0.99
299_E	305_V	1.096	0.99
78_S	273_D	1.094	0.99
196_F	200_N	1.087	0.99
332_L	348_L	1.080	0.99
268_V	273_D	1.079	0.99
363_I	367_K	1.078	0.99
213_Q	219_P	1.077	0.99
471_I	474_L	1.077	0.99
367_K	371_D	1.076	0.99
77_N	81_M	1.074	0.99
124_S	272_E	1.071	0.99
385_A	389_G	1.070	0.99
222_M	226_L	1.067	0.99
320_M	355_G	1.067	0.99
139_S	142_T	1.066	0.99
76_I	96_F	1.065	0.99
160_T	189_T	1.063	0.99
403_T	413_W	1.060	0.99
292_L	319_A	1.059	0.99
95_H	113_N	1.059	0.99
159_L	163_G	1.056	0.99
67_I	118_S	1.055	0.99
451_S	455_S	1.055	0.99
268_V	272_E	1.048	0.99
167_S	185_T	1.047	0.99
167_S	181_A	1.046	0.99
108_A	141_V	1.035	0.99
360_N	389_G	1.032	0.99
291_Q	321_E	1.028	0.99
417_A	433_R	1.027	0.98
274_F	277_A	1.025	0.98
274_F	345_Y	1.023	0.98
353_D	356_Q	1.010	0.98
208_G	215_S	1.009	0.98
387_L	392_P	1.009	0.98
399_L	403_T	1.005	0.98
220_Q	224_T	1.003	0.98
352_I	356_Q	1.002	0.98
448_S	452_S	0.997	0.98
470_R	473_Q	0.997	0.98
126_N	224_T	0.993	0.98
290_N	293_T	0.992	0.98
458_K	465_A	0.987	0.98
270_S	273_D	0.986	0.98
330_K	334_P	0.984	0.98
233_A	249_P	0.978	0.98
249_P	253_L	0.977	0.98
421_A	433_R	0.973	0.98
274_F	279_A	0.971	0.98
369_A	378_L	0.971	0.98
114_V	138_I	0.969	0.98
80_G	138_I	0.969	0.98
104_I	123_Y	0.967	0.98
346_L	369_A	0.963	0.98
244_L	249_P	0.961	0.98
98_L	121_F	0.958	0.98
202_Q	255_D	0.957	0.98
79_L	130_L	0.954	0.98
248_L	253_L	0.952	0.98
225_F	249_P	0.952	0.98
276_L	280_R	0.951	0.98
177_A	181_A	0.948	0.97
320_M	348_L	0.945	0.97
296_L	299_E	0.941	0.97
223_P	260_A	0.940	0.97
447_I	451_S	0.938	0.97
427_D	456_Q	0.932	0.97
277_A	295_D	0.931	0.97
280_R	283_G	0.929	0.97
463_Q	466_R	0.928	0.97
128_S	217_F	0.926	0.97
152_D	155_R	0.924	0.97
304_N	307_Q	0.924	0.97
464_Q	468_D	0.923	0.97
325_Y	356_Q	0.914	0.97
359_A	388_Q	0.913	0.97
179_M	183_T	0.912	0.97
380_L	412_G	0.912	0.97
447_I	474_L	0.910	0.97
139_S	207_I	0.910	0.97
80_G	114_V	0.905	0.97
122_R	282_L	0.904	0.97
360_N	391_Q	0.902	0.97
88_N	91_K	0.901	0.97
76_I	116_L	0.899	0.97
268_V	271_S	0.899	0.97
354_L	359_A	0.898	0.96
222_M	260_A	0.898	0.96
379_Q	401_R	0.897	0.96
384_N	388_Q	0.895	0.96
281_T	284_M	0.891	0.96
230_L	250_E	0.891	0.96
276_L	279_A	0.890	0.96
420_E	432_A	0.890	0.96
143_Q	203_E	0.888	0.96
327_E	330_K	0.886	0.96
312_Q	335_L	0.885	0.96
81_M	85_S	0.885	0.96
97_F	113_N	0.883	0.96
271_S	276_L	0.883	0.96
158_P	161_W	0.878	0.96
156_S	189_T	0.878	0.96
273_D	276_L	0.875	0.96
187_A	190_R	0.871	0.96
108_A	112_G	0.870	0.96
327_E	331_T	0.869	0.96
401_R	404_F	0.868	0.96
256_A	260_A	0.867	0.96
230_L	253_L	0.866	0.96
79_L	131_A	0.866	0.96
392_P	419_A	0.865	0.96
438_A	474_L	0.865	0.96
431_A	471_I	0.864	0.96
258_N	261_N	0.862	0.96
364_N	368_N	0.862	0.96
471_I	475_R	0.860	0.96
148_R	203_E	0.856	0.95
332_L	349_A	0.854	0.95
427_D	457_V	0.853	0.95
241_E	244_L	0.853	0.95
416_L	420_E	0.850	0.95
433_R	437_Y	0.850	0.95
351_D	381_N	0.848	0.95
184_G	188_G	0.847	0.95
64_A	99_I	0.845	0.95
233_A	244_L	0.845	0.95
478_Q	481_F	0.843	0.95
84_V	94_F	0.843	0.95
272_E	281_T	0.841	0.95
187_A	191_Q	0.840	0.95
433_R	436_G	0.838	0.95
346_L	368_N	0.835	0.95
393_Q	397_N	0.834	0.95
390_G	422_A	0.833	0.95
188_G	192_G	0.831	0.95
273_D	277_A	0.828	0.94
183_T	186_L	0.827	0.94
107_F	115_V	0.825	0.94
308_Q	311_A	0.825	0.94
421_A	426_R	0.825	0.94
406_N	409_D	0.822	0.94
414_D	436_G	0.818	0.94
359_A	363_I	0.816	0.94
450_L	467_Y	0.814	0.94
258_N	262_Q	0.813	0.94
224_T	227_E	0.812	0.94
326_D	330_K	0.812	0.94
415_L	418_Q	0.807	0.94
435_E	439_L	0.806	0.94
475_R	478_Q	0.803	0.94
387_L	415_L	0.803	0.94
444_D	478_Q	0.800	0.93
141_V	146_L	0.799	0.93
316_A	320_M	0.798	0.93
207_I	211_V	0.794	0.93
457_V	467_Y	0.785	0.93
186_L	189_T	0.783	0.93
213_Q	263_M	0.782	0.93
320_M	325_Y	0.781	0.93
226_L	253_L	0.781	0.93
238_R	250_E	0.781	0.93
431_A	435_E	0.781	0.93
400_N	403_T	0.781	0.93
335_L	345_Y	0.777	0.92
466_R	469_A	0.775	0.92
325_Y	352_I	0.775	0.92
100_N	285_Y	0.775	0.92
187_A	243_L	0.774	0.92
334_P	338_A	0.770	0.92
225_F	229_L	0.769	0.92
80_G	94_F	0.765	0.92
67_I	98_L	0.764	0.92
113_N	146_L	0.764	0.92
118_S	279_A	0.759	0.91
450_L	454_S	0.755	0.91
317_L	320_M	0.752	0.91
461_S	464_Q	0.752	0.91
376_P	379_Q	0.751	0.91
108_A	115_V	0.751	0.91
203_E	207_I	0.751	0.91
478_Q	482_K	0.750	0.91
394_E	397_N	0.747	0.91
359_A	389_G	0.747	0.91
309_R	339_E	0.746	0.91
219_P	263_M	0.745	0.91
294_S	298_D	0.745	0.91
384_N	387_L	0.740	0.90
219_P	260_A	0.740	0.90
220_Q	223_P	0.740	0.90
363_I	386_Y	0.739	0.90
465_A	468_D	0.738	0.90
277_A	280_R	0.735	0.90
401_R	405_N	0.735	0.90
213_Q	259_R	0.733	0.90
469_A	473_Q	0.732	0.90
269_Q	275_Y	0.731	0.90
284_M	351_D	0.731	0.90
208_G	216_G	0.730	0.90
465_A	472_D	0.730	0.90
149_A	196_F	0.730	0.90
104_I	241_E	0.728	0.90
396_A	400_N	0.728	0.90
341_G	368_N	0.725	0.90
275_Y	344_W	0.725	0.90
276_L	342_N	0.721	0.89
255_D	259_R	0.721	0.89
120_L	130_L	0.720	0.89
101_N	119_A	0.717	0.89
467_Y	470_R	0.715	0.89
344_W	347_D	0.715	0.89
209_I	260_A	0.712	0.89
185_T	189_T	0.707	0.88
453_A	457_V	0.705	0.88
286_N	290_N	0.703	0.88
304_N	308_Q	0.703	0.88
467_Y	471_I	0.701	0.88
272_E	278_K	0.701	0.88
447_I	478_Q	0.700	0.88
289_R	293_T	0.700	0.88
280_R	284_M	0.698	0.88
296_L	315_R	0.697	0.88
118_S	281_T	0.692	0.87
431_A	467_Y	0.689	0.87
152_D	192_G	0.689	0.87
367_K	386_Y	0.687	0.87
470_R	474_L	0.685	0.87
123_Y	228_K	0.684	0.87
466_R	471_I	0.684	0.87
303_G	308_Q	0.680	0.86
203_E	206_R	0.679	0.86
132_S	226_L	0.679	0.86
380_L	402_Y	0.679	0.86
222_M	256_A	0.678	0.86
274_F	278_K	0.678	0.86
146_L	150_M	0.677	0.86
248_L	256_A	0.675	0.86
336_L	345_Y	0.675	0.86
215_S	219_P	0.675	0.86
366_L	385_A	0.674	0.86
419_A	423_L	0.672	0.86
279_A	310_A	0.672	0.86
349_A	352_I	0.669	0.85
167_S	171_A	0.669	0.85
254_A	257_R	0.666	0.85
131_A	212_L	0.663	0.85
180_A	187_A	0.663	0.85
209_I	219_P	0.662	0.85
394_E	398_I	0.661	0.85
99_I	117_H	0.661	0.85
477_L	480_R	0.661	0.85
206_R	210_Q	0.659	0.85
127_E	271_S	0.658	0.84
143_Q	148_R	0.658	0.84
149_A	197_T	0.657	0.84
437_Y	440_A	0.657	0.84
313_Y	317_L	0.656	0.84
326_D	356_Q	0.656	0.84
437_Y	442_R	0.654	0.84
464_Q	467_Y	0.654	0.84
87_A	91_K	0.653	0.84
437_Y	449_L	0.652	0.84
364_N	367_K	0.649	0.84
94_F	138_I	0.649	0.84
230_L	249_P	0.647	0.84
269_Q	273_D	0.647	0.84
202_Q	206_R	0.646	0.83
279_A	283_G	0.646	0.83
194_I	245_T	0.645	0.83
68_N	73_T	0.643	0.83
451_S	454_S	0.643	0.83
420_E	423_L	0.642	0.83
299_E	307_Q	0.641	0.83
284_M	321_E	0.641	0.83
149_A	152_D	0.637	0.83
398_I	402_Y	0.634	0.82
393_Q	396_A	0.632	0.82
452_S	456_Q	0.629	0.82
452_S	455_S	0.629	0.82
231_D	234_R	0.628	0.82
370_R	382_L	0.627	0.82
84_V	90_V	0.625	0.81
402_Y	412_G	0.623	0.81
332_L	352_I	0.622	0.81
210_Q	259_R	0.621	0.81
72_L	75_Y	0.621	0.81
409_D	412_G	0.619	0.81
172_M	178_G	0.619	0.81
292_L	296_L	0.619	0.81
451_S	479_E	0.619	0.81
216_G	248_L	0.618	0.81
426_R	456_Q	0.618	0.81
70_P	74_Q	0.617	0.81
255_D	258_N	0.617	0.81
75_Y	127_E	0.617	0.81
128_S	274_F	0.616	0.80
267_V	270_S	0.616	0.80
308_Q	312_Q	0.615	0.80
413_W	435_E	0.615	0.80
341_G	397_N	0.614	0.80
127_E	274_F	0.611	0.80
292_L	299_E	0.610	0.80
270_S	275_Y	0.610	0.80
114_V	134_M	0.610	0.80
410_S	440_A	0.610	0.80
276_L	281_T	0.609	0.80
272_E	283_G	0.608	0.80
272_E	279_A	0.608	0.80
276_L	283_G	0.607	0.79
79_L	134_M	0.607	0.79
221_A	226_L	0.606	0.79
110_F	146_L	0.606	0.79
396_A	425_N	0.605	0.79
150_M	154_Q	0.605	0.79
476_Q	479_E	0.602	0.79
384_N	415_L	0.600	0.79
146_L	196_F	0.598	0.78
79_L	274_F	0.598	0.78
171_A	177_A	0.598	0.78
220_Q	260_A	0.598	0.78
200_N	203_E	0.598	0.78
149_A	242_I	0.598	0.78
135_A	139_S	0.596	0.78
229_L	233_A	0.596	0.78
74_Q	78_S	0.594	0.78
315_R	331_T	0.594	0.78
401_R	416_L	0.592	0.78
139_S	143_Q	0.590	0.78
282_L	288_G	0.589	0.77
466_R	472_D	0.588	0.77
354_L	388_Q	0.586	0.77
284_M	348_L	0.584	0.77
299_E	311_A	0.582	0.77
104_I	229_L	0.582	0.77
283_G	321_E	0.581	0.76
229_L	249_P	0.581	0.76
384_N	418_Q	0.579	0.76
161_W	165_L	0.578	0.76
71_L	351_D	0.577	0.76
414_D	418_Q	0.577	0.76
333_Q	336_L	0.576	0.76
376_P	402_Y	0.575	0.76
242_I	256_A	0.574	0.76
410_S	436_G	0.574	0.76
272_E	339_E	0.572	0.75
323_N	356_Q	0.572	0.75
73_T	76_I	0.571	0.75
66_L	97_F	0.571	0.75
208_G	213_Q	0.571	0.75
331_T	335_L	0.571	0.75
104_I	225_F	0.570	0.75
462_L	465_A	0.570	0.75
160_T	164_A	0.570	0.75
299_E	308_Q	0.567	0.75
227_E	230_L	0.567	0.75
429_E	433_R	0.564	0.74
70_P	82_R	0.564	0.74
75_Y	80_G	0.563	0.74
80_G	116_L	0.563	0.74
151_E	154_Q	0.563	0.74
445_Q	449_L	0.562	0.74
293_T	297_L	0.562	0.74
72_L	156_S	0.562	0.74
169_L	172_M	0.560	0.74
365_R	427_D	0.558	0.74
426_R	430_L	0.557	0.73
221_A	244_L	0.556	0.73
195_S	199_Q	0.556	0.73
171_A	175_P	0.555	0.73
171_A	182_L	0.554	0.73
333_Q	361_E	0.553	0.73
328_A	352_I	0.553	0.73
362_A	385_A	0.552	0.73
246_H	252_R	0.551	0.73
432_A	435_E	0.551	0.73
421_A	429_E	0.551	0.73
326_D	358_K	0.550	0.72
123_Y	232_Q	0.550	0.72
79_L	83_L	0.550	0.72
292_L	322_A	0.550	0.72
475_R	479_E	0.549	0.72
320_M	356_Q	0.549	0.72
241_E	248_L	0.548	0.72
377_V	381_N	0.548	0.72
268_V	276_L	0.548	0.72
318_Q	322_A	0.548	0.72
225_F	228_K	0.548	0.72
110_F	113_N	0.546	0.72
86_H	214_R	0.546	0.72
468_D	474_L	0.546	0.72
387_L	399_L	0.546	0.72
437_Y	445_Q	0.545	0.72
109_F	113_N	0.544	0.72
272_E	277_A	0.543	0.72
242_I	245_T	0.543	0.72
244_L	348_L	0.541	0.71
322_A	360_N	0.541	0.71
163_G	169_L	0.540	0.71
191_Q	243_L	0.539	0.71
83_L	221_A	0.537	0.71
132_S	256_A	0.537	0.71
473_Q	477_L	0.536	0.71
476_Q	480_R	0.535	0.70
195_S	244_L	0.535	0.70
363_I	370_R	0.535	0.70
116_L	130_L	0.534	0.70
260_A	441_G	0.534	0.70
435_E	438_A	0.533	0.70
281_T	285_Y	0.532	0.70
149_A	193_M	0.531	0.70
237_S	244_L	0.531	0.70
387_L	395_A	0.531	0.70
379_Q	402_Y	0.531	0.70
158_P	166_G	0.530	0.70
317_L	348_L	0.530	0.70
104_I	120_L	0.529	0.70
206_R	259_R	0.528	0.69
96_F	114_V	0.525	0.69
274_F	281_T	0.525	0.69
73_T	419_A	0.525	0.69
320_M	347_D	0.524	0.69
238_R	244_L	0.523	0.69
354_L	362_A	0.522	0.69
95_H	408_D	0.522	0.69
83_L	134_M	0.521	0.68
428_Q	463_Q	0.521	0.68
336_L	339_E	0.521	0.68
277_A	281_T	0.520	0.68
108_A	114_V	0.518	0.68
120_L	225_F	0.516	0.68
164_A	167_S	0.515	0.68
223_P	255_D	0.515	0.68
380_L	406_N	0.515	0.68
289_R	326_D	0.514	0.67
194_I	243_L	0.514	0.67
386_Y	391_Q	0.513	0.67
240_P	244_L	0.513	0.67
126_N	228_K	0.513	0.67
78_S	81_M	0.512	0.67
177_A	438_A	0.511	0.67
466_R	470_R	0.511	0.67
293_T	308_Q	0.510	0.67
111_G	196_F	0.510	0.67
354_L	384_N	0.509	0.67
235_Y	239_P	0.509	0.67
354_L	381_N	0.509	0.67
130_L	229_L	0.508	0.67
472_D	476_Q	0.508	0.67
459_L	464_Q	0.506	0.66
199_Q	203_E	0.506	0.66
438_A	470_R	0.504	0.66
472_D	475_R	0.504	0.66
345_Y	434_A	0.501	0.65
233_A	236_S	0.501	0.65
105_N	247_P	0.500	0.65
445_Q	448_S	0.500	0.65
73_T	77_N	0.500	0.65
294_S	297_L	0.500	0.65

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3c37_A	1	0.4559	100	0.63	Contact Map
4aw6_A	1	0.4887	100	0.779	Contact Map
4il3_A	1	0.4764	99.9	0.781	Contact Map
3as5_A	1	0.3737	99.7	0.856	Contact Map
4gyw_A	1	0.3717	99.6	0.862	Contact Map
2y4t_A	1	0.4415	99.6	0.862	Contact Map
3ieg_A	1	0.4394	99.6	0.863	Contact Map
1w3b_A	1	0.5708	99.6	0.864	Contact Map
2ho1_A	1	0.4148	99.6	0.865	Contact Map
3vtx_A	1	0.3347	99.6	0.866	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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