T0942_30-487_c90_1_458 - CASP12

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

T0942_30-487_c90_1_458 - T0942_30-487_c90 1-458

ID:	137	Sequences: ADTLPDMGTSAGSTLSIGQEMQMGDYYVRQLRGSAPLINDPLLTQYINSLGMRLVSHANSVKTPFHFFLINNDEINAFAFFGGNVVLHSALFRYSDNESQLASVMAHEISHVTQRHLARAMEDQQRSAPLTWVGALGSILLAMASPQAGMAALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRSGFDPQAMPTFLEKLLDQARYSSRPPEILLTHPLPESRLADARNRANQMRPMVVQSSEDFYLAKARTLGMYNSGRNQLTSDLLDEWAKGNVRQQRAAQYGRALQAMEANKYDEARKTLQPLLAAEPGNAWYLDLATDIDLGQNKANEAINRLKNARDLRTNPVLQLNLANAYLQGGQPQEAANILNRYTFNNKDDSNGWDLLAQAEAALNNRDQELAARAEGYALAGRLDQAISLLSSASSQVKLGSLQQARYDARIDQLRQLQERFKPYTKM	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_10
Length:	458 (450)
Sequences:	2355 (1708)
Seq/√Len:	80.5

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
295_K	298_E	5.315	1.00
329_K	332_E	5.218	1.00
96_D	199_K	4.740	1.00
362_Q	365_E	4.663	1.00
353_L	357_Y	4.323	1.00
243_E	247_L	4.198	1.00
165_I	168_T	4.130	1.00
103_S	192_A	3.863	1.00
405_A	421_L	3.586	1.00
27_Y	80_F	3.033	1.00
100_Q	195_T	3.029	1.00
87_L	105_M	3.006	1.00
406_E	441_R	2.989	1.00
74_E	88_H	2.912	1.00
51_G	67_F	2.878	1.00
290_A	298_E	2.877	1.00
283_Q	302_T	2.815	1.00
43_L	69_L	2.798	1.00
241_S	245_F	2.793	1.00
162_Q	166_S	2.688	1.00
100_Q	199_K	2.686	1.00
396_N	399_Q	2.590	1.00
384_W	403_A	2.523	1.00
286_R	290_A	2.520	1.00
194_P	227_A	2.520	1.00
134_G	156_T	2.475	1.00
300_R	324_D	2.434	1.00
110_S	182_V	2.422	1.00
334_I	353_L	2.419	1.00
212_E	222_S	2.402	1.00
99_S	192_A	2.372	1.00
338_K	365_E	2.350	1.00
47_I	69_L	2.288	1.00
50_L	188_F	2.263	1.00
21_M	25_D	2.236	1.00
334_I	356_A	2.208	1.00
243_E	246_Y	2.166	1.00
418_I	442_I	2.129	1.00
304_Q	320_A	2.055	1.00
210_P	215_L	2.039	1.00
325_L	356_A	2.031	1.00
198_E	228_R	1.992	1.00
247_L	250_A	1.955	1.00
276_V	279_Q	1.946	1.00
57_H	186_S	1.913	1.00
65_F	113_T	1.894	1.00
324_D	336_R	1.889	1.00
92_F	101_L	1.884	1.00
95_S	101_L	1.869	1.00
413_R	416_Q	1.865	1.00
239_V	245_F	1.848	1.00
432_S	436_A	1.848	1.00
341_R	349_L	1.834	1.00
245_F	250_A	1.824	1.00
245_F	248_A	1.819	1.00
220_P	224_L	1.809	1.00
161_R	164_M	1.808	1.00
425_S	439_D	1.801	1.00
290_A	295_K	1.794	1.00
422_S	446_R	1.793	1.00
249_K	253_L	1.792	1.00
242_S	245_F	1.788	1.00
106_A	183_L	1.770	1.00
290_A	302_T	1.741	1.00
324_D	332_E	1.710	1.00
72_N	88_H	1.707	1.00
157_L	161_R	1.703	1.00
280_R	316_Y	1.700	1.00
337_L	352_N	1.689	1.00
401_L	420_L	1.682	1.00
247_L	252_T	1.681	1.00
358_L	390_A	1.681	1.00
103_S	193_M	1.671	1.00
367_A	391_E	1.664	1.00
264_T	268_L	1.648	1.00
246_Y	250_A	1.633	1.00
259_G	262_Q	1.620	1.00
320_A	324_D	1.619	1.00
307_L	320_A	1.618	1.00
9_T	12_G	1.618	1.00
38_I	89_S	1.611	1.00
173_Q	222_S	1.599	1.00
137_G	141_L	1.579	1.00
168_T	171_N	1.564	1.00
138_S	156_T	1.542	0.99
138_S	153_L	1.536	0.99
167_F	171_N	1.533	0.99
110_S	113_T	1.528	0.99
268_L	271_W	1.527	0.99
244_D	247_L	1.520	0.99
55_V	85_V	1.516	0.99
138_S	152_A	1.513	0.99
68_F	86_V	1.498	0.99
54_L	109_I	1.498	0.99
357_Y	365_E	1.490	0.99
300_R	304_Q	1.489	0.99
280_R	309_A	1.487	0.99
321_T	337_L	1.485	0.99
80_F	117_L	1.482	0.99
95_S	196_F	1.473	0.99
300_R	327_Q	1.463	0.99
120_A	171_N	1.431	0.99
273_K	277_R	1.426	0.99
273_K	276_V	1.414	0.99
242_S	247_L	1.413	0.99
401_L	423_S	1.411	0.99
28_V	84_N	1.410	0.99
54_L	182_V	1.409	0.99
69_L	92_F	1.400	0.99
374_T	383_G	1.397	0.99
150_M	154_T	1.390	0.99
363_P	393_A	1.385	0.99
97_N	100_Q	1.377	0.99
338_K	353_L	1.374	0.99
357_Y	369_I	1.372	0.99
304_Q	308_A	1.371	0.99
102_A	183_L	1.367	0.99
245_F	249_K	1.362	0.99
95_S	245_F	1.357	0.99
180_I	227_A	1.352	0.99
47_I	67_F	1.349	0.99
47_I	87_L	1.348	0.99
340_A	349_L	1.344	0.99
75_I	94_Y	1.342	0.99
281_A	285_G	1.342	0.99
364_Q	394_L	1.337	0.98
248_A	251_R	1.334	0.98
310_E	316_Y	1.330	0.98
310_E	313_N	1.330	0.98
367_A	387_L	1.315	0.98
239_V	243_E	1.308	0.98
243_E	248_A	1.302	0.98
36_P	71_N	1.292	0.98
67_F	109_I	1.288	0.98
367_A	390_A	1.288	0.98
151_A	155_G	1.285	0.98
283_Q	309_A	1.284	0.98
339_N	342_D	1.279	0.98
51_G	109_I	1.272	0.98
300_R	323_I	1.269	0.98
267_L	271_W	1.263	0.98
85_V	109_I	1.262	0.98
119_R	174_E	1.260	0.98
283_Q	305_P	1.259	0.98
239_V	247_L	1.255	0.98
27_Y	31_L	1.241	0.98
170_Q	173_Q	1.239	0.98
350_Q	369_I	1.231	0.97
20_E	115_R	1.228	0.97
353_L	369_I	1.223	0.97
247_L	254_G	1.222	0.97
243_E	250_A	1.221	0.97
391_E	396_N	1.219	0.97
130_L	134_G	1.218	0.97
402_A	406_E	1.207	0.97
363_P	390_A	1.206	0.97
5_P	8_G	1.205	0.97
147_Q	150_M	1.203	0.97
439_D	443_D	1.199	0.97
303_L	319_L	1.196	0.97
43_L	248_A	1.194	0.97
239_V	242_S	1.193	0.97
114_Q	178_I	1.190	0.97
104_V	196_F	1.188	0.97
305_P	308_A	1.173	0.97
324_D	329_K	1.171	0.97
418_I	445_L	1.169	0.96
409_A	448_L	1.165	0.96
244_D	248_A	1.164	0.96
330_A	356_A	1.162	0.96
409_A	445_L	1.162	0.96
273_K	279_Q	1.153	0.96
25_D	84_N	1.141	0.96
133_V	140_L	1.132	0.96
275_N	278_Q	1.129	0.96
391_E	399_Q	1.127	0.96
291_M	323_I	1.117	0.95
307_L	317_L	1.116	0.95
173_Q	226_D	1.115	0.95
268_L	285_G	1.114	0.95
442_I	445_L	1.112	0.95
389_Q	393_A	1.109	0.95
240_Q	243_E	1.105	0.95
102_A	188_F	1.103	0.95
28_V	32_R	1.100	0.95
291_M	319_L	1.097	0.95
55_V	109_I	1.096	0.95
259_G	263_L	1.094	0.95
194_P	231_A	1.094	0.95
146_P	149_G	1.094	0.95
377_N	380_D	1.094	0.95
137_G	142_A	1.090	0.95
334_I	360_G	1.089	0.95
177_R	226_D	1.087	0.95
367_A	394_L	1.087	0.95
300_R	320_A	1.080	0.95
262_Q	265_S	1.074	0.94
291_M	296_Y	1.072	0.94
43_L	246_Y	1.070	0.94
142_A	148_A	1.067	0.94
152_A	155_G	1.066	0.94
289_Q	293_A	1.057	0.94
50_L	101_L	1.054	0.94
241_S	246_Y	1.052	0.94
10_S	122_E	1.052	0.94
371_N	391_E	1.051	0.94
354_A	370_L	1.048	0.94
201_L	224_L	1.047	0.94
247_L	251_R	1.046	0.94
421_L	438_Y	1.043	0.93
180_I	184_Q	1.043	0.93
407_G	411_A	1.033	0.93
181_Q	185_R	1.031	0.93
68_F	84_N	1.031	0.93
358_L	363_P	1.029	0.93
96_D	100_Q	1.026	0.93
374_T	387_L	1.021	0.93
245_F	256_Y	1.018	0.93
184_Q	234_M	1.015	0.92
51_G	196_F	1.014	0.92
51_G	85_V	1.011	0.92
302_T	305_P	1.010	0.92
145_S	148_A	1.009	0.92
296_Y	327_Q	1.009	0.92
51_G	65_F	1.007	0.92
374_T	384_W	1.006	0.92
258_S	261_N	1.000	0.92
51_G	68_F	0.994	0.92
95_S	243_E	0.993	0.92
240_Q	247_L	0.991	0.92
291_M	326_G	0.988	0.91
358_L	386_L	0.987	0.91
195_T	199_K	0.983	0.91
322_D	352_N	0.979	0.91
245_F	254_G	0.978	0.91
191_Q	232_N	0.977	0.91
91_L	104_V	0.974	0.91
241_S	244_D	0.971	0.91
320_A	323_I	0.970	0.91
33_G	192_A	0.969	0.91
187_G	236_P	0.963	0.90
261_N	265_S	0.962	0.90
437_R	442_I	0.959	0.90
29_R	33_G	0.953	0.90
330_A	334_I	0.952	0.90
356_A	360_G	0.949	0.90
55_V	65_F	0.947	0.90
402_A	437_R	0.946	0.90
332_E	335_N	0.940	0.89
114_Q	230_R	0.939	0.89
246_Y	252_T	0.939	0.89
243_E	254_G	0.935	0.89
187_G	219_L	0.931	0.89
21_M	64_P	0.927	0.89
317_L	340_A	0.927	0.89
134_G	138_S	0.926	0.89
446_R	449_Q	0.922	0.88
434_Q	437_R	0.922	0.88
121_M	124_Q	0.920	0.88
156_T	160_T	0.916	0.88
283_Q	306_L	0.913	0.88
19_Q	22_Q	0.909	0.88
4_L	8_G	0.906	0.87
154_T	157_L	0.904	0.87
123_D	126_R	0.903	0.87
127_S	130_L	0.901	0.87
371_N	387_L	0.896	0.87
54_L	192_A	0.895	0.87
265_S	268_L	0.895	0.87
138_S	149_G	0.893	0.87
296_Y	323_I	0.892	0.87
355_N	359_Q	0.891	0.87
241_S	248_A	0.890	0.86
233_Q	338_K	0.890	0.86
24_G	84_N	0.888	0.86
21_M	84_N	0.882	0.86
51_G	105_M	0.881	0.86
440_A	444_Q	0.881	0.86
31_L	35_A	0.876	0.86
84_N	117_L	0.871	0.85
58_A	61_V	0.871	0.85
227_A	231_A	0.867	0.85
250_A	254_G	0.866	0.85
179_G	186_S	0.862	0.85
325_L	330_A	0.862	0.85
245_F	251_R	0.861	0.85
418_I	449_Q	0.861	0.85
369_I	373_Y	0.855	0.84
392_A	397_R	0.853	0.84
112_V	117_L	0.851	0.84
265_S	269_D	0.851	0.84
275_N	279_Q	0.847	0.84
431_G	436_A	0.846	0.84
219_L	227_A	0.842	0.83
248_A	315_W	0.839	0.83
193_M	231_A	0.838	0.83
246_Y	249_K	0.837	0.83
54_L	105_M	0.835	0.83
209_R	221_E	0.834	0.83
209_R	215_L	0.832	0.83
248_A	252_T	0.830	0.82
179_G	193_M	0.830	0.82
89_S	252_T	0.827	0.82
312_G	339_N	0.827	0.82
284_Y	288_L	0.826	0.82
79_A	112_V	0.823	0.82
449_Q	452_F	0.822	0.82
13_S	16_S	0.822	0.82
196_F	220_P	0.822	0.82
103_S	227_A	0.821	0.82
70_I	200_L	0.820	0.82
323_I	327_Q	0.820	0.82
388_A	404_R	0.819	0.82
131_T	160_T	0.816	0.81
110_S	178_I	0.813	0.81
78_F	86_V	0.809	0.81
50_L	54_L	0.806	0.81
320_A	336_R	0.806	0.81
173_Q	177_R	0.806	0.81
42_L	322_D	0.801	0.80
168_T	215_L	0.796	0.80
23_M	26_Y	0.794	0.80
114_Q	174_E	0.794	0.80
442_I	446_R	0.793	0.79
259_G	265_S	0.793	0.79
20_E	24_G	0.792	0.79
287_A	291_M	0.792	0.79
46_Y	50_L	0.790	0.79
80_F	84_N	0.790	0.79
59_N	62_K	0.790	0.79
28_V	31_L	0.787	0.79
129_P	132_W	0.787	0.79
297_D	301_K	0.785	0.79
241_S	247_L	0.781	0.78
197_L	227_A	0.780	0.78
258_S	262_Q	0.779	0.78
357_Y	362_Q	0.778	0.78
184_Q	190_P	0.777	0.78
10_S	134_G	0.774	0.78
211_P	215_L	0.774	0.78
120_A	168_T	0.773	0.78
324_D	327_Q	0.770	0.77
42_L	251_R	0.769	0.77
165_I	216_T	0.767	0.77
192_A	215_L	0.766	0.77
354_A	369_I	0.766	0.77
241_S	250_A	0.764	0.77
46_Y	214_L	0.764	0.77
306_L	316_Y	0.763	0.77
269_D	273_K	0.762	0.77
48_N	52_M	0.756	0.76
247_L	256_Y	0.755	0.76
240_Q	246_Y	0.753	0.76
260_R	264_T	0.752	0.76
435_Q	439_D	0.747	0.75
179_G	187_G	0.745	0.75
228_R	232_N	0.744	0.75
48_N	377_N	0.743	0.75
303_L	320_A	0.742	0.75
391_E	403_A	0.740	0.75
392_A	400_E	0.740	0.75
244_D	250_A	0.740	0.75
151_A	158_A	0.738	0.74
239_V	244_D	0.737	0.74
436_A	439_D	0.734	0.74
266_D	270_E	0.734	0.74
30_Q	33_G	0.733	0.74
97_N	199_K	0.733	0.74
415_D	449_Q	0.732	0.74
162_Q	165_I	0.730	0.74
302_T	306_L	0.728	0.73
75_I	196_F	0.727	0.73
449_Q	453_K	0.726	0.73
322_D	325_L	0.725	0.73
398_D	428_V	0.724	0.73
365_E	368_N	0.723	0.73
288_L	319_L	0.721	0.73
114_Q	119_R	0.719	0.72
364_Q	368_N	0.718	0.72
331_N	362_Q	0.718	0.72
149_G	153_L	0.715	0.72
120_A	167_F	0.714	0.72
319_L	323_I	0.714	0.72
404_R	407_G	0.714	0.72
334_I	357_Y	0.713	0.72
243_E	252_T	0.712	0.72
430_L	434_Q	0.712	0.72
288_L	291_M	0.711	0.72
27_Y	35_A	0.711	0.72
43_L	250_A	0.711	0.72
242_S	246_Y	0.710	0.71
266_D	269_D	0.707	0.71
385_D	407_G	0.704	0.71
254_G	292_E	0.702	0.71
47_I	101_L	0.700	0.70
201_L	221_E	0.700	0.70
23_M	80_F	0.699	0.70
355_N	358_L	0.699	0.70
8_G	119_R	0.696	0.70
61_V	337_L	0.695	0.70
46_Y	98_E	0.695	0.70
419_S	423_S	0.695	0.70
304_Q	332_E	0.695	0.70
192_A	197_L	0.692	0.70
56_S	112_V	0.691	0.69
259_G	264_T	0.689	0.69
239_V	250_A	0.688	0.69
12_G	15_L	0.687	0.69
444_Q	448_L	0.687	0.69
337_L	404_R	0.687	0.69
65_F	109_I	0.685	0.69
351_L	383_G	0.684	0.69
409_A	441_R	0.680	0.68
321_T	336_R	0.679	0.68
318_D	352_N	0.677	0.68
25_D	56_S	0.676	0.68
174_E	230_R	0.673	0.67
110_S	227_A	0.672	0.67
86_V	197_L	0.672	0.67
51_G	112_V	0.669	0.67
216_T	300_R	0.669	0.67
402_A	438_Y	0.668	0.67
338_K	362_Q	0.667	0.67
335_N	342_D	0.667	0.67
70_I	178_I	0.667	0.67
179_G	230_R	0.666	0.67
340_A	344_R	0.666	0.67
347_P	380_D	0.665	0.66
355_N	386_L	0.664	0.66
204_A	215_L	0.663	0.66
4_L	7_M	0.662	0.66
252_T	267_L	0.661	0.66
297_D	329_K	0.661	0.66
212_E	215_L	0.659	0.66
81_F	117_L	0.658	0.66
421_L	425_S	0.657	0.66
213_I	216_T	0.656	0.65
298_E	302_T	0.651	0.65
168_T	200_L	0.651	0.65
104_V	230_R	0.651	0.65
142_A	149_G	0.650	0.65
30_Q	82_G	0.649	0.65
67_F	85_V	0.649	0.65
46_Y	101_L	0.645	0.64
316_Y	405_A	0.645	0.64
338_K	342_D	0.644	0.64
109_I	112_V	0.644	0.64
99_S	188_F	0.644	0.64
248_A	253_L	0.643	0.64
213_I	227_A	0.643	0.64
431_G	434_Q	0.642	0.64
243_E	251_R	0.639	0.63
28_V	68_F	0.637	0.63
238_V	241_S	0.637	0.63
390_A	394_L	0.637	0.63
437_R	440_A	0.634	0.63
123_D	167_F	0.633	0.63
338_K	357_Y	0.632	0.63
132_W	431_G	0.632	0.63
191_Q	194_P	0.632	0.63
408_Y	416_Q	0.631	0.62
18_G	22_Q	0.630	0.62
97_N	195_T	0.629	0.62
263_L	266_D	0.629	0.62
261_N	264_T	0.629	0.62
286_R	293_A	0.627	0.62
372_R	387_L	0.627	0.62
110_S	179_G	0.626	0.62
254_G	257_N	0.624	0.62
66_H	84_N	0.624	0.62
68_F	80_F	0.624	0.62
157_L	160_T	0.623	0.61
226_D	229_N	0.623	0.61
404_R	408_Y	0.622	0.61
180_I	231_A	0.621	0.61
219_L	224_L	0.620	0.61
23_M	449_Q	0.619	0.61
156_T	353_L	0.618	0.61
252_T	262_Q	0.617	0.61
27_Y	117_L	0.616	0.61
119_R	186_S	0.616	0.61
67_F	196_F	0.616	0.61
100_Q	215_L	0.615	0.60
315_W	318_D	0.614	0.60
79_A	83_G	0.614	0.60
312_G	362_Q	0.613	0.60
245_F	258_S	0.613	0.60
358_L	370_L	0.613	0.60
70_I	88_H	0.613	0.60
20_E	118_A	0.613	0.60
159_G	163_G	0.612	0.60
88_H	113_T	0.612	0.60
322_D	326_G	0.611	0.60
95_S	104_V	0.611	0.60
44_T	48_N	0.611	0.60
258_S	265_S	0.611	0.60
117_L	121_M	0.610	0.60
279_Q	282_A	0.609	0.60
237_M	364_Q	0.606	0.59
405_A	412_G	0.606	0.59
248_A	265_S	0.605	0.59
17_I	63_T	0.605	0.59
151_A	354_A	0.604	0.59
245_F	316_Y	0.604	0.59
57_H	182_V	0.604	0.59
222_S	407_G	0.603	0.59
385_D	389_Q	0.602	0.59
334_I	338_K	0.600	0.59
89_S	250_A	0.600	0.59
196_F	200_L	0.600	0.59
301_K	305_P	0.600	0.59
420_L	423_S	0.598	0.58
53_R	98_E	0.598	0.58
15_L	23_M	0.598	0.58
155_G	159_G	0.598	0.58
321_T	356_A	0.596	0.58
194_P	226_D	0.596	0.58
146_P	389_Q	0.596	0.58
133_V	149_G	0.595	0.58
247_L	255_M	0.594	0.58
60_S	65_F	0.594	0.58
437_R	441_R	0.594	0.58
260_R	265_S	0.593	0.58
113_T	182_V	0.593	0.58
423_S	427_Q	0.591	0.57
247_L	258_S	0.590	0.57
177_R	181_Q	0.590	0.57
123_D	163_G	0.589	0.57
330_A	359_Q	0.588	0.57
162_Q	168_T	0.588	0.57
384_W	409_A	0.587	0.57
136_L	139_I	0.586	0.57
441_R	444_Q	0.586	0.57
82_G	167_F	0.584	0.57
180_I	213_I	0.583	0.56
94_Y	203_Q	0.582	0.56
158_A	173_Q	0.582	0.56
274_G	279_Q	0.582	0.56
212_E	219_L	0.581	0.56
31_L	70_I	0.579	0.56
97_N	447_Q	0.579	0.56
295_K	301_K	0.579	0.56
195_T	200_L	0.578	0.56
81_F	112_V	0.577	0.56
215_L	220_P	0.576	0.56
242_S	248_A	0.575	0.55
299_A	323_I	0.575	0.55
24_G	32_R	0.574	0.55
273_K	278_Q	0.574	0.55
59_N	185_R	0.573	0.55
354_A	390_A	0.571	0.55
348_V	352_N	0.571	0.55
162_Q	201_L	0.571	0.55
408_Y	420_L	0.569	0.55
222_S	419_S	0.569	0.55
350_Q	373_Y	0.568	0.54
400_E	404_R	0.567	0.54
27_Y	112_V	0.567	0.54
322_D	373_Y	0.566	0.54
190_P	361_G	0.565	0.54
82_G	152_A	0.565	0.54
308_A	329_K	0.564	0.54
31_L	144_A	0.562	0.54
132_W	136_L	0.562	0.54
58_A	316_Y	0.561	0.54
148_A	152_A	0.561	0.54
253_L	259_G	0.561	0.54
279_Q	283_Q	0.561	0.54
252_T	261_N	0.560	0.53
38_I	307_L	0.560	0.53
45_Q	57_H	0.559	0.53
182_V	186_S	0.559	0.53
3_T	325_L	0.559	0.53
174_E	178_I	0.559	0.53
27_Y	228_R	0.558	0.53
135_A	153_L	0.556	0.53
94_Y	136_L	0.555	0.53
85_V	225_A	0.554	0.53
146_P	154_T	0.553	0.53
143_M	167_F	0.553	0.53
47_I	127_S	0.551	0.52
331_N	360_G	0.550	0.52
23_M	286_R	0.550	0.52
142_A	145_S	0.550	0.52
87_L	255_M	0.550	0.52
234_M	314_A	0.550	0.52
330_A	333_A	0.549	0.52
31_L	80_F	0.549	0.52
38_I	195_T	0.547	0.52
287_A	320_A	0.547	0.52
23_M	167_F	0.545	0.51
189_D	195_T	0.545	0.51
261_N	266_D	0.545	0.51
163_G	384_W	0.545	0.51
133_V	392_A	0.543	0.51
123_D	128_A	0.543	0.51
435_Q	438_Y	0.543	0.51
325_L	359_Q	0.542	0.51
72_N	192_A	0.542	0.51
162_Q	214_L	0.541	0.51
247_L	265_S	0.541	0.51
432_S	435_Q	0.540	0.51
16_S	20_E	0.539	0.51
9_T	15_L	0.539	0.51
287_A	303_L	0.537	0.50
250_A	253_L	0.536	0.50
50_L	105_M	0.536	0.50
45_Q	49_S	0.536	0.50
85_V	163_G	0.536	0.50
247_L	316_Y	0.535	0.50
47_I	149_G	0.535	0.50
50_L	102_A	0.533	0.50
398_D	438_Y	0.533	0.50
86_V	95_S	0.532	0.50
446_R	450_E	0.532	0.50
313_N	318_D	0.532	0.50
337_L	353_L	0.532	0.50
44_T	47_I	0.531	0.50
300_R	338_K	0.531	0.50
441_R	445_L	0.531	0.50
103_S	318_D	0.531	0.50
347_P	351_L	0.530	0.50
79_A	86_V	0.530	0.50
110_S	114_Q	0.529	0.49
35_A	70_I	0.528	0.49
141_L	444_Q	0.527	0.49
15_L	109_I	0.527	0.49
433_L	436_A	0.525	0.49
149_G	211_P	0.525	0.49
162_Q	213_I	0.525	0.49
45_Q	346_N	0.524	0.49
57_H	185_R	0.522	0.49
86_V	420_L	0.522	0.49
50_L	98_E	0.522	0.49
81_F	168_T	0.521	0.48
89_S	303_L	0.520	0.48
249_K	252_T	0.520	0.48
75_I	212_E	0.519	0.48
134_G	392_A	0.519	0.48
256_Y	260_R	0.519	0.48
127_S	163_G	0.518	0.48
293_A	331_N	0.517	0.48
226_D	230_R	0.515	0.48
370_L	374_T	0.514	0.47
348_V	380_D	0.514	0.47
185_R	453_K	0.513	0.47
18_G	183_L	0.513	0.47
51_G	384_W	0.513	0.47
385_D	404_R	0.513	0.47
143_M	149_G	0.512	0.47
68_F	109_I	0.512	0.47
207_S	210_P	0.511	0.47
314_A	318_D	0.510	0.47
282_A	305_P	0.509	0.47
297_D	331_N	0.509	0.47
341_R	353_L	0.509	0.47
242_S	328_N	0.509	0.47
416_Q	420_L	0.509	0.47
29_R	406_E	0.508	0.47
201_L	220_P	0.507	0.47
131_T	200_L	0.507	0.47
102_A	186_S	0.507	0.47
274_G	278_Q	0.506	0.46
95_S	167_F	0.506	0.46
245_F	306_L	0.504	0.46
438_Y	445_L	0.503	0.46
254_G	262_Q	0.503	0.46
347_P	377_N	0.502	0.46
18_G	25_D	0.502	0.46
439_D	445_L	0.502	0.46
274_G	277_R	0.502	0.46
110_S	171_N	0.501	0.46
252_T	255_M	0.501	0.46
328_N	356_A	0.500	0.46
269_D	298_E	0.500	0.46

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3c37_A	1	0.4847	100	0.66	Contact Map
4il3_A	1	0.4607	99.9	0.801	Contact Map
4aw6_A	1	0.4694	99.9	0.805	Contact Map
3ieg_A	1	0.4694	99.7	0.869	Contact Map
3as5_A	1	0.3603	99.7	0.87	Contact Map
2y4t_A	1	0.4694	99.6	0.873	Contact Map
2pl2_A	1	0.3624	99.6	0.874	Contact Map
3jb9_R	1	0.0262	99.6	0.874	Contact Map
3vtx_A	1	0.3559	99.6	0.874	Contact Map
2yhc_A	1	0.393	99.6	0.875	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0118 seconds.