T0873_1_501 - CASP12 - GREMLIN Contacts

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T0873_1_501 - T0873 1-501

ID:	13	Sequences: MGSSHHHHHHSQDPNSMKRLKDLREYLAVLEAHQDVREIDEPVDPHLEAGAAARWTYENRGPALMLNDLTGTGRFCRILAAPAGLSTIPGSPLARVALSLGLDVSATAHEIVDSLAAARTREPVAPVVVDSAPCQDNVLLGDDANLDRFPAPLLHEGDGGPYLNTWGTIIVSTPDGSFTNWAIARVMKIDGKRMTGTFIPTQHLGQIRKLWDNLGQPMPFAIVQGTEPGIPFVASMPLPDGIEEVGFLGAYFGEPLELVRAKTVDLLVPASAEIVIEGHVMPGRTAVEGPMGEYAGYQPRHTSMQPEYVVDAITYRDDPIWPISVAGEPVDETHTAWGLVTAAEALALLRAAKLPVATAWMPFEAAAHWLIVCLTEDWRERMPGLSRDGICLRISQVLAATRIEAMMTRVFVLDDDVDPSDQTELAWAIATRVSPAHGRLVRHGMINPLAGCYSAEERRLGYGPKAVLNGLLPPMAERSRRSSFRHTYPEPVRQRVIELLA	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_10
Length:	501 (431)
Sequences:	4539 (2659)
Seq/√Len:	128.1

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
31_E	38_E	4.605	1.00
135_Q	262_K	4.116	1.00
137_N	317_D	4.057	1.00
38_E	67_N	3.997	1.00
40_D	67_N	3.911	1.00
279_H	311_D	3.759	1.00
375_T	415_D	3.615	1.00
211_W	218_M	3.484	1.00
127_V	257_E	3.364	1.00
46_H	153_L	3.218	1.00
49_A	78_I	3.200	1.00
190_D	193_R	3.163	1.00
145_N	191_G	2.905	1.00
257_E	271_S	2.895	1.00
44_D	70_T	2.883	1.00
421_D	424_E	2.842	1.00
173_T	210_L	2.838	1.00
42_P	70_T	2.818	1.00
287_V	304_M	2.808	1.00
227_E	252_F	2.806	1.00
153_L	161_P	2.789	1.00
395_S	467_V	2.789	1.00
145_N	148_R	2.739	1.00
212_D	285_T	2.739	1.00
53_A	80_A	2.605	1.00
35_D	94_A	2.585	1.00
132_A	259_V	2.346	1.00
175_D	210_L	2.249	1.00
179_T	267_L	2.170	1.00
137_N	315_Y	2.133	1.00
279_H	309_V	2.133	1.00
22_D	271_S	2.126	1.00
220_F	308_Y	2.103	1.00
217_P	282_P	2.096	1.00
433_V	468_L	2.093	1.00
276_I	310_V	2.090	1.00
76_C	274_I	2.052	1.00
287_V	302_T	2.042	1.00
433_V	439_R	2.029	1.00
418_D	421_D	1.982	1.00
42_P	68_D	1.981	1.00
27_L	79_L	1.966	1.00
217_P	279_H	1.927	1.00
186_V	222_I	1.924	1.00
136_D	317_D	1.914	1.00
217_P	281_M	1.911	1.00
171_V	207_I	1.908	1.00
439_R	466_A	1.901	1.00
139_L	315_Y	1.894	1.00
219_P	264_V	1.888	1.00
28_A	31_E	1.882	1.00
193_R	286_A	1.881	1.00
193_R	309_V	1.840	1.00
357_A	373_C	1.830	1.00
411_F	429_I	1.824	1.00
31_E	67_N	1.823	1.00
192_K	309_V	1.820	1.00
181_W	245_V	1.817	1.00
79_L	88_I	1.809	1.00
179_T	243_E	1.802	1.00
261_A	268_V	1.788	1.00
260_R	265_D	1.776	1.00
284_R	309_V	1.776	1.00
260_R	267_L	1.768	1.00
35_D	95_R	1.754	1.00
223_V	226_T	1.754	1.00
436_A	464_P	1.746	1.00
128_V	267_L	1.745	1.00
194_M	308_Y	1.744	1.00
195_T	286_A	1.737	1.00
170_I	245_V	1.719	1.00
125_A	246_G	1.709	1.00
189_I	195_T	1.708	1.00
189_I	286_A	1.690	1.00
434_S	452_C	1.675	1.00
221_A	261_A	1.670	1.00
205_G	209_K	1.663	1.00
28_A	32_A	1.640	1.00
358_T	420_S	1.632	1.00
154_L	323_I	1.629	1.00
56_T	64_L	1.626	1.00
134_C	314_T	1.619	1.00
147_D	191_G	1.609	1.00
135_Q	314_T	1.607	1.00
396_Q	442_R	1.572	1.00
372_V	398_L	1.571	1.00
151_A	188_K	1.569	1.00
146_L	310_V	1.569	1.00
29_V	33_H	1.533	1.00
114_S	118_A	1.531	1.00
261_A	264_V	1.529	1.00
263_T	312_A	1.522	1.00
357_A	375_T	1.513	1.00
36_V	65_M	1.512	1.00
29_V	98_L	1.509	1.00
219_P	279_H	1.505	1.00
159_G	187_M	1.486	1.00
395_S	410_V	1.477	1.00
26_Y	99_S	1.476	1.00
76_C	319_P	1.473	1.00
139_L	313_I	1.464	1.00
46_H	161_P	1.455	1.00
222_I	308_Y	1.433	1.00
209_K	213_N	1.432	1.00
264_V	267_L	1.423	1.00
370_L	407_M	1.420	1.00
418_D	424_E	1.411	1.00
180_N	244_E	1.404	1.00
21_K	254_E	1.390	1.00
110_E	113_D	1.384	1.00
45_P	71_G	1.383	1.00
147_D	188_K	1.381	1.00
163_L	224_Q	1.380	1.00
435_P	464_P	1.372	1.00
170_I	223_V	1.368	1.00
441_V	464_P	1.360	1.00
139_L	148_R	1.353	1.00
212_D	283_G	1.341	1.00
138_V	262_K	1.313	1.00
135_Q	138_V	1.302	1.00
45_P	161_P	1.295	1.00
436_A	443_H	1.294	1.00
221_A	264_V	1.288	1.00
373_C	419_P	1.281	1.00
22_D	25_E	1.277	1.00
409_R	433_V	1.269	1.00
210_L	213_N	1.268	1.00
29_V	32_A	1.267	1.00
346_L	350_R	1.264	1.00
175_D	214_L	1.262	1.00
203_H	244_E	1.256	1.00
224_Q	322_P	1.250	1.00
357_A	415_D	1.243	1.00
65_M	320_I	1.240	1.00
33_H	98_L	1.240	1.00
223_V	272_A	1.239	1.00
146_L	194_M	1.236	1.00
65_M	79_L	1.235	1.00
33_H	94_A	1.223	0.99
20_L	29_V	1.218	0.99
36_V	63_A	1.218	0.99
392_L	440_L	1.215	0.99
238_L	247_F	1.205	0.99
371_I	425_L	1.200	0.99
173_T	176_G	1.191	0.99
43_V	52_A	1.181	0.99
230_I	256_L	1.179	0.99
128_V	258_L	1.179	0.99
182_A	204_L	1.172	0.99
139_L	143_D	1.172	0.99
171_V	204_L	1.170	0.99
152_P	323_I	1.167	0.99
144_A	192_K	1.166	0.99
409_R	435_P	1.166	0.99
274_I	315_Y	1.160	0.99
245_V	258_L	1.158	0.99
24_R	273_E	1.156	0.99
67_N	77_R	1.147	0.99
408_T	450_A	1.142	0.99
169_I	196_G	1.140	0.99
144_A	191_G	1.138	0.99
139_L	144_A	1.136	0.99
168_T	181_W	1.132	0.99
369_W	430_A	1.126	0.99
310_V	313_I	1.124	0.99
24_R	318_D	1.120	0.99
194_M	310_V	1.116	0.99
281_M	284_R	1.115	0.99
172_S	265_D	1.114	0.99
411_F	470_G	1.114	0.99
114_S	117_A	1.113	0.99
157_G	298_Q	1.107	0.99
429_I	468_L	1.105	0.99
69_L	78_I	1.104	0.99
261_A	267_L	1.103	0.99
193_R	284_R	1.099	0.99
433_V	438_G	1.097	0.99
43_V	49_A	1.097	0.99
358_T	373_C	1.091	0.99
360_W	420_S	1.086	0.99
30_L	63_A	1.086	0.99
264_V	311_D	1.085	0.99
63_A	95_R	1.081	0.99
223_V	275_V	1.080	0.99
194_M	222_I	1.078	0.99
196_G	280_V	1.073	0.99
395_S	440_L	1.069	0.99
224_Q	276_I	1.060	0.99
134_C	272_A	1.059	0.99
399_A	467_V	1.056	0.99
75_F	148_R	1.053	0.98
243_E	246_G	1.051	0.98
27_L	320_I	1.049	0.98
295_A	449_L	1.047	0.98
219_P	265_D	1.042	0.98
371_I	419_P	1.042	0.98
149_F	274_I	1.039	0.98
196_G	308_Y	1.036	0.98
186_V	194_M	1.036	0.98
435_P	466_A	1.035	0.98
281_M	309_V	1.031	0.98
263_T	311_D	1.027	0.98
358_T	419_P	1.022	0.98
268_V	275_V	1.017	0.98
254_E	257_E	1.017	0.98
286_A	307_E	1.017	0.98
212_D	281_M	1.014	0.98
215_G	283_G	1.013	0.98
276_I	313_I	1.010	0.98
91_S	95_R	1.008	0.98
252_F	256_L	1.003	0.98
221_A	268_V	1.000	0.98
262_K	312_A	0.996	0.98
427_W	431_T	0.992	0.98
49_A	69_L	0.992	0.98
221_A	275_V	0.992	0.98
76_C	315_Y	0.992	0.98
413_L	425_L	0.990	0.98
371_I	413_L	0.988	0.98
90_G	95_R	0.981	0.98
131_S	135_Q	0.980	0.98
152_P	321_W	0.979	0.98
409_R	466_A	0.979	0.98
116_A	350_R	0.973	0.97
45_P	69_L	0.969	0.97
128_V	260_R	0.960	0.97
24_R	316_R	0.959	0.97
284_R	307_E	0.956	0.97
380_E	385_L	0.956	0.97
144_A	310_V	0.953	0.97
24_R	320_I	0.952	0.97
369_W	409_R	0.950	0.97
230_I	248_L	0.947	0.97
172_S	267_L	0.946	0.97
276_I	308_Y	0.945	0.97
124_V	249_G	0.942	0.97
72_T	75_F	0.940	0.97
379_R	474_P	0.940	0.97
174_P	210_L	0.934	0.97
348_L	351_A	0.934	0.97
209_K	212_D	0.933	0.97
163_L	321_W	0.931	0.97
371_I	411_F	0.927	0.97
375_T	380_E	0.922	0.96
134_C	259_V	0.919	0.96
226_T	322_P	0.917	0.96
135_Q	259_V	0.916	0.96
45_P	72_T	0.913	0.96
40_D	68_D	0.913	0.96
168_T	226_T	0.912	0.96
190_D	286_A	0.911	0.96
129_V	132_A	0.909	0.96
94_A	104_V	0.907	0.96
274_I	321_W	0.906	0.96
21_K	25_E	0.903	0.96
426_A	429_I	0.900	0.96
207_I	240_D	0.898	0.96
435_P	439_R	0.890	0.96
265_D	314_T	0.888	0.96
189_I	193_R	0.887	0.96
199_I	299_P	0.886	0.96
434_S	463_G	0.885	0.96
21_K	257_E	0.884	0.96
166_W	322_P	0.883	0.96
273_E	316_R	0.883	0.96
216_Q	279_H	0.882	0.95
35_D	98_L	0.879	0.95
75_F	318_D	0.875	0.95
221_A	266_L	0.875	0.95
422_Q	426_A	0.873	0.95
395_S	399_A	0.873	0.95
167_G	222_I	0.873	0.95
52_A	66_L	0.872	0.95
291_M	326_A	0.867	0.95
78_I	152_P	0.865	0.95
27_L	88_I	0.865	0.95
100_L	229_G	0.862	0.95
427_W	432_R	0.862	0.95
53_A	57_Y	0.860	0.95
262_K	314_T	0.860	0.95
222_I	276_I	0.859	0.95
24_R	27_L	0.856	0.95
124_V	250_A	0.853	0.95
369_W	426_A	0.853	0.95
108_A	112_V	0.852	0.95
261_A	265_D	0.850	0.94
261_A	314_T	0.849	0.94
356_V	372_V	0.849	0.94
360_W	363_F	0.847	0.94
113_D	117_A	0.844	0.94
188_K	194_M	0.843	0.94
374_L	379_R	0.843	0.94
233_V	248_L	0.840	0.94
43_V	66_L	0.840	0.94
364_E	423_T	0.840	0.94
172_S	179_T	0.838	0.94
263_T	314_T	0.835	0.94
50_G	154_L	0.835	0.94
170_I	181_W	0.834	0.94
259_V	262_K	0.831	0.94
408_T	452_C	0.827	0.94
227_E	230_I	0.825	0.94
169_I	186_V	0.822	0.93
133_P	136_D	0.821	0.93
203_H	206_Q	0.821	0.93
384_G	393_R	0.819	0.93
77_R	320_I	0.815	0.93
126_P	249_G	0.813	0.93
211_W	219_P	0.813	0.93
155_H	292_G	0.811	0.93
319_P	322_P	0.809	0.93
151_A	163_L	0.808	0.93
226_T	272_A	0.807	0.93
446_I	463_G	0.806	0.93
360_W	422_Q	0.804	0.93
49_A	152_P	0.800	0.93
207_I	218_M	0.799	0.92
138_V	314_T	0.799	0.92
163_L	167_G	0.797	0.92
183_I	234_A	0.796	0.92
382_M	385_L	0.794	0.92
362_P	371_I	0.788	0.92
203_H	240_D	0.787	0.92
79_L	320_I	0.786	0.92
143_D	191_G	0.785	0.92
144_A	276_I	0.783	0.92
349_L	394_I	0.783	0.92
217_P	311_D	0.782	0.92
51_A	55_W	0.779	0.91
44_D	48_E	0.778	0.91
132_A	136_D	0.773	0.91
37_R	62_P	0.771	0.91
356_V	359_A	0.771	0.91
169_I	220_F	0.770	0.91
161_P	188_K	0.767	0.91
379_R	391_C	0.767	0.91
20_L	227_E	0.765	0.91
64_L	80_A	0.763	0.91
248_L	256_L	0.759	0.90
63_A	79_L	0.759	0.90
417_V	428_A	0.753	0.90
305_Q	448_P	0.753	0.90
194_M	276_I	0.752	0.90
174_P	214_L	0.752	0.90
162_Y	187_M	0.752	0.90
108_A	111_I	0.750	0.90
328_E	424_E	0.747	0.90
193_R	307_E	0.745	0.90
163_L	188_K	0.745	0.90
168_T	234_A	0.744	0.90
186_V	196_G	0.743	0.89
50_G	325_V	0.741	0.89
149_F	313_I	0.739	0.89
212_D	282_P	0.739	0.89
239_P	242_I	0.735	0.89
345_A	349_L	0.733	0.89
372_V	412_V	0.733	0.89
362_P	426_A	0.732	0.89
285_T	304_M	0.732	0.89
369_W	411_F	0.731	0.89
80_A	323_I	0.729	0.89
440_L	443_H	0.729	0.89
129_V	270_A	0.728	0.89
198_F	280_V	0.728	0.89
260_R	264_V	0.728	0.89
384_G	396_Q	0.728	0.89
39_I	64_L	0.727	0.88
379_R	383_P	0.725	0.88
448_P	461_G	0.723	0.88
188_K	313_I	0.721	0.88
180_N	203_H	0.721	0.88
142_D	192_K	0.719	0.88
49_A	323_I	0.719	0.88
77_R	318_D	0.718	0.88
413_L	470_G	0.718	0.88
278_G	308_Y	0.713	0.87
441_V	466_A	0.711	0.87
69_L	72_T	0.711	0.87
120_T	347_A	0.711	0.87
411_F	468_L	0.711	0.87
392_L	396_Q	0.711	0.87
347_A	351_A	0.711	0.87
443_H	464_P	0.706	0.87
434_S	437_H	0.706	0.87
52_A	64_L	0.705	0.87
172_S	219_P	0.705	0.87
161_P	189_I	0.705	0.87
280_V	308_Y	0.700	0.86
170_I	266_L	0.696	0.86
158_D	291_M	0.696	0.86
424_E	427_W	0.695	0.86
440_L	467_V	0.694	0.86
168_T	223_V	0.691	0.86
361_M	370_L	0.691	0.86
259_V	314_T	0.690	0.86
23_L	27_L	0.689	0.86
433_V	441_V	0.687	0.85
65_M	77_R	0.686	0.85
69_L	77_R	0.685	0.85
169_I	222_I	0.683	0.85
372_V	410_V	0.682	0.85
184_A	204_L	0.682	0.85
227_E	271_S	0.681	0.85
22_D	27_L	0.680	0.85
31_E	40_D	0.680	0.85
355_P	380_E	0.680	0.85
184_A	198_F	0.679	0.85
213_N	216_Q	0.679	0.85
345_A	398_L	0.678	0.85
261_A	277_E	0.677	0.85
223_V	269_P	0.677	0.85
379_R	414_D	0.676	0.85
221_A	267_L	0.676	0.85
172_S	264_V	0.675	0.84
176_G	210_L	0.675	0.84
146_L	151_A	0.674	0.84
113_D	116_A	0.673	0.84
134_C	137_N	0.673	0.84
103_D	110_E	0.673	0.84
384_G	462_Y	0.672	0.84
30_L	36_V	0.669	0.84
56_T	61_G	0.669	0.84
183_I	235_S	0.667	0.84
124_V	255_P	0.665	0.84
215_G	282_P	0.662	0.83
37_R	41_E	0.662	0.83
115_L	118_A	0.662	0.83
135_Q	263_T	0.660	0.83
31_E	36_V	0.659	0.83
133_P	271_S	0.659	0.83
219_P	263_T	0.658	0.83
258_L	267_L	0.658	0.83
74_R	77_R	0.655	0.83
96_V	340_V	0.655	0.83
168_T	230_I	0.654	0.83
207_I	211_W	0.653	0.82
184_A	202_Q	0.652	0.82
224_Q	321_W	0.651	0.82
192_K	276_I	0.650	0.82
206_Q	210_L	0.649	0.82
29_V	101_G	0.648	0.82
43_V	50_G	0.648	0.82
232_F	341_T	0.648	0.82
282_P	285_T	0.647	0.82
208_R	212_D	0.646	0.82
173_T	241_G	0.646	0.82
102_L	110_E	0.645	0.82
20_L	252_F	0.644	0.82
168_T	231_P	0.644	0.82
167_G	183_I	0.642	0.81
268_V	314_T	0.641	0.81
31_E	34_Q	0.641	0.81
78_I	323_I	0.640	0.81
45_P	152_P	0.638	0.81
178_F	241_G	0.638	0.81
166_W	324_S	0.638	0.81
397_V	400_A	0.638	0.81
155_H	326_A	0.636	0.81
37_R	64_L	0.636	0.81
41_E	68_D	0.634	0.81
172_S	266_L	0.634	0.81
326_A	333_T	0.634	0.81
170_I	258_L	0.631	0.80
126_P	258_L	0.630	0.80
261_A	312_A	0.630	0.80
117_A	120_T	0.629	0.80
160_G	291_M	0.629	0.80
151_A	321_W	0.629	0.80
162_Y	194_M	0.629	0.80
373_C	415_D	0.628	0.80
433_V	470_G	0.627	0.80
391_C	394_I	0.627	0.80
364_E	426_A	0.624	0.80
87_T	90_G	0.623	0.79
52_A	55_W	0.622	0.79
162_Y	195_T	0.621	0.79
19_R	101_G	0.621	0.79
217_P	283_G	0.620	0.79
136_D	316_R	0.620	0.79
23_L	320_I	0.620	0.79
198_F	208_R	0.617	0.79
129_V	257_E	0.616	0.79
148_R	313_I	0.611	0.78
238_L	242_I	0.611	0.78
26_Y	79_L	0.610	0.78
170_I	261_A	0.609	0.78
147_D	161_P	0.608	0.78
186_V	308_Y	0.606	0.78
138_V	312_A	0.606	0.78
132_A	138_V	0.604	0.77
68_D	74_R	0.603	0.77
371_I	422_Q	0.603	0.77
428_A	431_T	0.602	0.77
439_R	468_L	0.599	0.77
27_L	36_V	0.599	0.77
359_A	398_L	0.599	0.77
338_G	360_W	0.597	0.77
125_A	249_G	0.597	0.77
369_W	373_C	0.596	0.76
409_R	468_L	0.596	0.76
91_S	94_A	0.595	0.76
156_E	298_Q	0.595	0.76
216_Q	317_D	0.595	0.76
346_L	359_A	0.594	0.76
145_N	192_K	0.594	0.76
149_F	319_P	0.594	0.76
417_V	432_R	0.593	0.76
48_E	66_L	0.593	0.76
355_P	375_T	0.592	0.76
47_L	153_L	0.592	0.76
426_A	430_A	0.592	0.76
49_A	66_L	0.590	0.76
432_R	472_L	0.590	0.76
163_L	276_I	0.590	0.76
49_A	80_A	0.588	0.75
155_H	327_G	0.587	0.75
394_I	398_L	0.587	0.75
277_E	314_T	0.583	0.75
374_L	412_V	0.583	0.75
315_Y	319_P	0.582	0.75
144_A	147_D	0.581	0.75
80_A	325_V	0.580	0.74
434_S	464_P	0.580	0.74
197_T	305_Q	0.579	0.74
144_A	148_R	0.578	0.74
330_V	334_H	0.577	0.74
20_L	25_E	0.577	0.74
371_I	426_A	0.575	0.74
208_R	306_P	0.573	0.74
334_H	363_F	0.572	0.73
136_D	315_Y	0.572	0.73
171_V	184_A	0.571	0.73
25_E	28_A	0.570	0.73
132_A	135_Q	0.570	0.73
198_F	204_L	0.570	0.73
106_A	111_I	0.569	0.73
266_L	269_P	0.569	0.73
259_V	269_P	0.569	0.73
134_C	270_A	0.568	0.73
231_P	322_P	0.568	0.73
50_G	152_P	0.566	0.73
354_L	397_V	0.566	0.73
237_P	368_H	0.566	0.73
126_P	246_G	0.564	0.72
236_M	341_T	0.561	0.72
409_R	429_I	0.559	0.72
417_V	427_W	0.558	0.72
395_S	412_V	0.558	0.72
135_Q	312_A	0.557	0.71
374_L	385_L	0.557	0.71
362_P	365_A	0.557	0.71
264_V	312_A	0.556	0.71
438_G	476_A	0.556	0.71
208_R	218_M	0.556	0.71
379_R	471_L	0.555	0.71
324_S	333_T	0.555	0.71
413_L	419_P	0.553	0.71
57_Y	87_T	0.552	0.71
416_D	432_R	0.552	0.71
126_P	129_V	0.552	0.71
212_D	218_M	0.552	0.71
442_R	467_V	0.550	0.71
342_A	360_W	0.550	0.71
50_G	323_I	0.550	0.71
360_W	419_P	0.549	0.70
197_T	448_P	0.549	0.70
38_E	65_M	0.548	0.70
158_D	195_T	0.548	0.70
133_P	316_R	0.548	0.70
186_V	276_I	0.547	0.70
151_A	194_M	0.547	0.70
132_A	270_A	0.546	0.70
72_T	76_C	0.546	0.70
113_D	346_L	0.546	0.70
56_T	90_G	0.545	0.70
197_T	299_P	0.545	0.70
333_T	337_W	0.543	0.70
97_A	101_G	0.542	0.69
124_V	246_G	0.541	0.69
411_F	425_L	0.540	0.69
23_L	79_L	0.539	0.69
372_V	394_I	0.538	0.69
192_K	311_D	0.537	0.69
438_G	473_P	0.537	0.69
132_A	258_L	0.536	0.69
174_P	216_Q	0.535	0.68
187_M	290_P	0.535	0.68
396_Q	400_A	0.535	0.68
197_T	449_L	0.535	0.68
208_R	281_M	0.534	0.68
54_R	58_E	0.533	0.68
102_L	114_S	0.532	0.68
134_C	315_Y	0.532	0.68
44_D	71_G	0.531	0.68
163_L	222_I	0.531	0.68
171_V	182_A	0.529	0.68
393_R	396_Q	0.525	0.67
181_W	244_E	0.525	0.67
179_T	258_L	0.524	0.67
274_I	319_P	0.524	0.67
64_L	87_T	0.523	0.67
122_E	130_D	0.522	0.67
207_I	241_G	0.522	0.67
53_A	56_T	0.521	0.66
95_R	98_L	0.520	0.66
35_D	91_S	0.520	0.66
257_E	270_A	0.519	0.66
76_C	318_D	0.519	0.66
286_A	304_M	0.519	0.66
398_L	410_V	0.519	0.66
160_G	187_M	0.518	0.66
199_I	202_Q	0.517	0.66
226_T	230_I	0.515	0.66
134_C	271_S	0.515	0.66
173_T	177_S	0.515	0.66
187_M	298_Q	0.513	0.65
80_A	154_L	0.513	0.65
130_D	143_D	0.513	0.65
365_A	368_H	0.513	0.65
384_G	400_A	0.512	0.65
139_L	142_D	0.511	0.65
392_L	442_R	0.511	0.65
391_C	395_S	0.511	0.65
397_V	401_T	0.511	0.65
188_K	310_V	0.510	0.65
213_N	375_T	0.510	0.65
113_D	350_R	0.508	0.64
89_P	336_A	0.508	0.64
96_V	335_T	0.508	0.64
166_W	326_A	0.507	0.64
202_Q	237_P	0.507	0.64
133_P	270_A	0.507	0.64
62_P	95_R	0.507	0.64
42_P	69_L	0.506	0.64
43_V	69_L	0.506	0.64
110_E	114_S	0.506	0.64
293_E	343_A	0.506	0.64
34_Q	62_P	0.504	0.64
219_P	261_A	0.504	0.64
264_V	268_V	0.502	0.64
331_D	334_H	0.502	0.64
143_D	192_K	0.502	0.64
424_E	428_A	0.501	0.63
369_W	435_P	0.500	0.63
362_P	422_Q	0.500	0.63
41_E	52_A	0.500	0.63

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4ip2_A	1	0.9541	100	0.129	Contact Map
4zad_A	1	0.9381	100	0.139	Contact Map
4za9_A	1	0.9421	100	0.14	Contact Map
2idb_A	1	0.9082	100	0.142	Contact Map
4zac_A	1	0.9481	100	0.144	Contact Map
3a5i_A	1	0.3154	15.9	0.982	Contact Map
2x49_A	1	0.3134	15.8	0.982	Contact Map
4a5p_A	1	0.012	15.7	0.982	Contact Map
2e1c_A	1	0.2555	14.6	0.982	Contact Map
3mix_A	1	0.3094	14.4	0.982	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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