T0942_1_487 - CASP12 - GREMLIN Contacts

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T0942_1_487 - T0942 1-487

ID:	115	Sequences: MFRQLKKNLVATLIAAMTIGQVAPAFADSADTLPDMGTSAGSTLSIGQEMQMGDYYVRQLRGSAPLINDPLLTQYINSLGMRLVSHANSVKTPFHFFLINNDEINAFAFFGGNVVLHSALFRYSDNESQLASVMAHEISHVTQRHLARAMEDQQRSAPLTWVGALGSILLAMASPQAGMAALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRSGFDPQAMPTFLEKLLDQARYSSRPPEILLTHPLPESRLADARNRANQMRPMVVQSSEDFYLAKARTLGMYNSGRNQLTSDLLDEWAKGNVRQQRAAQYGRALQAMEANKYDEARKTLQPLLAAEPGNAWYLDLATDIDLGQNKANEAINRLKNARDLRTNPVLQLNLANAYLQGGQPQEAANILNRYTFNNKDDSNGWDLLAQAEAALNNRDQELAARAEGYALAGRLDQAISLLSSASSQVKLGSLQQARYDARIDQLRQLQERFKPYTKM	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_10
Length:	487 (417)
Sequences:	3688 (2614)
Seq/√Len:	128.0

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
358_K	361_E	5.505	1.00
324_K	327_E	5.072	1.00
129_Q	224_T	4.300	1.00
125_D	228_K	4.032	1.00
391_Q	394_E	3.940	1.00
382_L	386_Y	3.565	1.00
425_N	428_Q	3.564	1.00
194_I	197_T	3.164	1.00
333_Q	349_A	3.114	1.00
367_K	394_E	3.002	1.00
132_S	221_A	3.002	1.00
435_E	470_R	2.874	1.00
227_E	257_R	2.775	1.00
163_G	185_T	2.760	1.00
363_I	382_L	2.723	1.00
312_Q	331_T	2.668	1.00
129_Q	228_K	2.668	1.00
116_L	134_M	2.636	1.00
434_A	450_L	2.596	1.00
413_W	432_A	2.586	1.00
103_E	117_H	2.579	1.00
124_S	130_L	2.484	1.00
442_R	445_Q	2.438	1.00
319_A	327_E	2.400	1.00
329_R	353_D	2.359	1.00
363_I	385_A	2.340	1.00
309_R	345_Y	2.280	1.00
366_L	381_N	2.278	1.00
241_E	251_S	2.266	1.00
121_F	130_L	2.208	1.00
80_G	96_F	2.174	1.00
312_Q	338_A	2.159	1.00
339_E	342_N	2.155	1.00
396_A	419_A	2.148	1.00
83_L	138_I	2.117	1.00
223_P	256_A	2.085	1.00
393_Q	423_L	2.071	1.00
396_A	420_E	2.066	1.00
272_E	276_L	2.060	1.00
128_S	221_A	2.047	1.00
239_P	244_L	2.047	1.00
367_K	382_L	2.046	1.00
368_N	371_D	2.004	1.00
396_A	423_L	1.995	1.00
101_N	117_H	1.975	1.00
354_L	385_A	1.973	1.00
191_Q	195_S	1.965	1.00
76_I	98_L	1.963	1.00
80_G	134_M	1.930	1.00
312_Q	334_P	1.878	1.00
72_L	98_L	1.865	1.00
210_Q	214_R	1.840	1.00
139_S	211_V	1.836	1.00
379_Q	398_I	1.829	1.00
370_R	378_L	1.823	1.00
142_T	211_V	1.814	1.00
396_A	416_L	1.773	1.00
420_E	425_N	1.768	1.00
87_A	90_V	1.765	1.00
315_R	319_A	1.753	1.00
386_Y	394_E	1.743	1.00
79_L	217_F	1.724	1.00
295_D	299_E	1.716	1.00
353_D	361_E	1.708	1.00
403_T	412_G	1.693	1.00
451_S	475_R	1.691	1.00
125_D	129_Q	1.667	1.00
132_S	222_M	1.657	1.00
336_L	346_L	1.654	1.00
83_L	211_V	1.652	1.00
319_A	324_K	1.641	1.00
135_A	212_L	1.641	1.00
351_D	355_G	1.635	1.00
208_G	222_M	1.619	1.00
353_D	365_R	1.609	1.00
430_L	449_L	1.598	1.00
387_L	419_A	1.596	1.00
84_V	114_V	1.594	1.00
319_A	331_T	1.594	1.00
336_L	349_A	1.590	1.00
216_G	265_P	1.571	1.00
295_D	314_G	1.567	1.00
278_K	282_L	1.560	1.00
386_Y	398_I	1.559	1.00
329_R	356_Q	1.558	1.00
84_V	138_I	1.547	1.00
454_S	468_D	1.546	1.00
120_L	133_V	1.522	1.00
447_I	471_I	1.517	1.00
418_Q	422_A	1.516	1.00
329_R	349_A	1.507	1.00
124_S	274_F	1.505	1.00
86_H	215_S	1.503	1.00
202_Q	251_S	1.482	1.00
292_L	318_Q	1.478	1.00
65_P	100_N	1.477	1.00
181_A	184_G	1.471	1.00
271_S	275_Y	1.466	1.00
349_A	365_R	1.461	1.00
349_A	353_D	1.448	1.00
209_I	256_A	1.437	1.00
291_Q	295_D	1.433	1.00
257_R	261_N	1.423	1.00
420_E	428_Q	1.393	1.00
350_T	366_L	1.393	1.00
72_L	275_Y	1.380	1.00
270_S	274_F	1.377	1.00
190_R	193_M	1.358	1.00
329_R	352_I	1.358	1.00
400_N	420_E	1.357	1.00
167_S	182_L	1.353	1.00
199_Q	202_Q	1.348	1.00
430_L	452_S	1.346	1.00
97_F	115_V	1.333	1.00
109_F	146_L	1.321	1.00
70_P	375_N	1.319	1.00
436_G	440_A	1.310	1.00
320_M	352_I	1.309	1.00
329_R	333_Q	1.292	1.00
75_Y	277_A	1.284	1.00
331_T	334_P	1.282	1.00
363_I	389_G	1.280	1.00
309_R	338_A	1.278	1.00
186_L	190_R	1.277	1.00
305_V	308_Q	1.277	1.00
292_L	315_R	1.262	1.00
272_E	275_Y	1.258	1.00
400_N	416_L	1.258	1.00
124_S	225_F	1.249	1.00
131_A	217_F	1.249	1.00
72_L	277_A	1.240	1.00
94_F	142_T	1.240	1.00
296_L	327_E	1.230	1.00
143_Q	207_I	1.229	1.00
220_Q	261_N	1.226	1.00
149_A	200_N	1.222	0.99
124_S	272_E	1.213	0.99
353_D	358_K	1.212	0.99
166_G	170_L	1.207	0.99
197_T	200_N	1.206	0.99
226_L	256_A	1.205	0.99
275_Y	278_K	1.202	0.99
392_P	422_A	1.198	0.99
171_A	178_G	1.195	0.99
180_A	184_G	1.191	0.99
277_A	295_D	1.186	0.99
224_T	228_K	1.184	0.99
332_L	348_L	1.174	0.99
334_P	337_A	1.174	0.99
175_P	178_G	1.171	0.99
75_Y	79_L	1.170	0.99
438_A	477_L	1.169	0.99
310_A	314_G	1.162	0.99
299_E	305_V	1.159	0.99
468_D	472_D	1.159	0.99
167_S	178_G	1.152	0.99
126_N	129_Q	1.152	0.99
249_P	253_L	1.144	0.99
461_S	465_A	1.141	0.99
96_F	138_I	1.140	0.99
333_Q	337_A	1.134	0.99
383_A	399_L	1.132	0.99
196_F	200_N	1.124	0.99
76_I	96_F	1.124	0.99
208_G	215_S	1.122	0.99
268_V	272_E	1.122	0.99
403_T	413_W	1.120	0.99
369_A	378_L	1.113	0.99
160_T	189_T	1.109	0.99
206_R	255_D	1.107	0.99
339_E	345_Y	1.106	0.99
291_Q	321_E	1.105	0.99
382_L	398_I	1.104	0.99
275_Y	279_A	1.104	0.99
176_Q	179_M	1.102	0.99
359_A	385_A	1.101	0.99
67_I	118_S	1.095	0.99
274_F	345_Y	1.093	0.99
359_A	362_A	1.081	0.99
139_S	142_T	1.080	0.99
276_L	279_A	1.074	0.99
471_I	474_L	1.070	0.99
346_L	365_R	1.069	0.99
292_L	319_A	1.065	0.99
268_V	273_D	1.065	0.99
222_M	226_L	1.063	0.99
159_L	163_G	1.062	0.99
80_G	138_I	1.059	0.99
167_S	185_T	1.055	0.99
270_S	273_D	1.054	0.98
225_F	249_P	1.048	0.98
167_S	181_A	1.045	0.98
79_L	130_L	1.042	0.98
352_I	356_Q	1.041	0.98
367_K	371_D	1.034	0.98
78_S	273_D	1.033	0.98
104_I	123_Y	1.031	0.98
361_E	364_N	1.027	0.98
417_A	433_R	1.020	0.98
133_V	225_F	1.019	0.98
225_F	229_L	1.014	0.98
316_A	332_L	1.009	0.98
274_F	279_A	1.004	0.98
88_N	91_K	1.000	0.98
320_M	355_G	0.996	0.98
220_Q	224_T	0.990	0.98
76_I	116_L	0.989	0.98
421_A	433_R	0.986	0.98
213_Q	219_P	0.982	0.98
387_L	392_P	0.980	0.98
223_P	260_A	0.980	0.98
363_I	367_K	0.979	0.98
458_K	465_A	0.977	0.98
346_L	369_A	0.977	0.98
464_Q	468_D	0.975	0.97
222_M	260_A	0.974	0.97
380_L	412_G	0.972	0.97
269_Q	272_E	0.967	0.97
95_H	113_N	0.967	0.97
108_A	112_G	0.963	0.97
98_L	121_F	0.953	0.97
80_G	114_V	0.953	0.97
360_N	391_Q	0.952	0.97
248_L	253_L	0.947	0.97
304_N	307_Q	0.947	0.97
399_L	403_T	0.947	0.97
385_A	389_G	0.946	0.97
128_S	217_F	0.946	0.97
271_S	276_L	0.943	0.97
122_R	282_L	0.941	0.97
108_A	141_V	0.941	0.97
77_N	81_M	0.939	0.97
274_F	277_A	0.937	0.97
359_A	388_Q	0.936	0.97
280_R	283_G	0.936	0.97
447_I	474_L	0.931	0.97
384_N	388_Q	0.929	0.97
448_S	452_S	0.926	0.97
320_M	348_L	0.925	0.97
152_D	155_R	0.919	0.96
470_R	473_Q	0.912	0.96
202_Q	255_D	0.910	0.96
179_M	183_T	0.910	0.96
406_N	409_D	0.909	0.96
233_A	249_P	0.909	0.96
141_V	146_L	0.904	0.96
84_V	94_F	0.903	0.96
431_A	435_E	0.902	0.96
272_E	281_T	0.900	0.96
97_F	113_N	0.897	0.96
420_E	432_A	0.897	0.96
353_D	356_Q	0.895	0.96
320_M	325_Y	0.895	0.96
427_D	457_V	0.889	0.96
114_V	138_I	0.889	0.96
143_Q	203_E	0.884	0.96
126_N	224_T	0.883	0.96
427_D	456_Q	0.883	0.96
296_L	299_E	0.882	0.95
312_Q	335_L	0.881	0.95
177_A	181_A	0.881	0.95
268_V	271_S	0.881	0.95
364_N	368_N	0.880	0.95
87_A	91_K	0.880	0.95
244_L	249_P	0.879	0.95
256_A	260_A	0.875	0.95
108_A	115_V	0.874	0.95
290_N	293_T	0.872	0.95
431_A	471_I	0.870	0.95
230_L	253_L	0.870	0.95
226_L	253_L	0.869	0.95
258_N	262_Q	0.869	0.95
360_N	389_G	0.866	0.95
451_S	455_S	0.864	0.95
351_D	381_N	0.864	0.95
325_Y	352_I	0.864	0.95
118_S	279_A	0.863	0.95
113_N	146_L	0.863	0.95
325_Y	356_Q	0.863	0.95
421_A	426_R	0.860	0.95
433_R	436_G	0.860	0.95
463_Q	466_R	0.859	0.95
354_L	359_A	0.858	0.95
187_A	190_R	0.857	0.95
184_G	188_G	0.856	0.95
327_E	331_T	0.853	0.95
156_S	189_T	0.851	0.95
99_I	117_H	0.851	0.95
139_S	207_I	0.844	0.94
273_D	276_L	0.843	0.94
186_L	189_T	0.838	0.94
450_L	467_Y	0.836	0.94
233_A	244_L	0.836	0.94
276_L	280_R	0.835	0.94
438_A	474_L	0.834	0.94
332_L	349_A	0.833	0.94
187_A	191_Q	0.832	0.94
273_D	277_A	0.827	0.94
79_L	131_A	0.826	0.94
471_I	475_R	0.825	0.94
359_A	363_I	0.824	0.94
219_P	260_A	0.822	0.93
107_F	115_V	0.817	0.93
308_Q	311_A	0.816	0.93
80_G	94_F	0.814	0.93
392_P	419_A	0.808	0.93
188_G	192_G	0.808	0.93
64_A	99_I	0.806	0.93
230_L	250_E	0.804	0.93
433_R	437_Y	0.803	0.93
131_A	212_L	0.799	0.92
414_D	436_G	0.798	0.92
238_R	250_E	0.796	0.92
400_N	403_T	0.795	0.92
415_L	418_Q	0.791	0.92
387_L	415_L	0.791	0.92
437_Y	442_R	0.790	0.92
241_E	244_L	0.789	0.92
330_K	334_P	0.789	0.92
317_L	320_M	0.788	0.92
158_P	161_W	0.788	0.92
444_D	478_Q	0.782	0.92
202_Q	206_R	0.780	0.92
447_I	451_S	0.779	0.91
478_Q	481_F	0.779	0.91
222_M	256_A	0.777	0.91
224_T	227_E	0.777	0.91
213_Q	263_M	0.777	0.91
390_G	422_A	0.774	0.91
393_Q	397_N	0.770	0.91
104_I	241_E	0.770	0.91
118_S	281_T	0.770	0.91
268_V	274_F	0.767	0.91
416_L	420_E	0.761	0.91
316_A	320_M	0.759	0.90
277_A	280_R	0.757	0.90
326_D	330_K	0.756	0.90
183_T	186_L	0.755	0.90
447_I	478_Q	0.755	0.90
219_P	263_M	0.752	0.90
457_V	467_Y	0.752	0.90
81_M	85_S	0.749	0.90
437_Y	449_L	0.749	0.90
313_Y	317_L	0.746	0.90
327_E	330_K	0.745	0.90
346_L	368_N	0.744	0.90
280_R	284_M	0.742	0.89
100_N	285_Y	0.741	0.89
207_I	211_V	0.738	0.89
281_T	284_M	0.738	0.89
367_K	386_Y	0.738	0.89
379_Q	401_R	0.737	0.89
258_N	261_N	0.736	0.89
336_L	345_Y	0.733	0.89
275_Y	344_W	0.732	0.89
215_S	219_P	0.732	0.89
276_L	342_N	0.731	0.89
248_L	256_A	0.730	0.89
123_Y	228_K	0.728	0.88
120_L	130_L	0.728	0.88
461_S	464_Q	0.726	0.88
466_R	471_I	0.724	0.88
270_S	275_Y	0.724	0.88
475_R	478_Q	0.724	0.88
213_Q	259_R	0.723	0.88
149_A	196_F	0.721	0.88
349_A	352_I	0.721	0.88
221_A	226_L	0.720	0.88
127_E	271_S	0.720	0.88
296_L	315_R	0.719	0.88
203_E	207_I	0.719	0.88
478_Q	482_K	0.716	0.88
359_A	389_G	0.715	0.88
341_G	368_N	0.714	0.88
101_N	119_A	0.714	0.88
419_A	423_L	0.713	0.87
394_E	397_N	0.708	0.87
220_Q	223_P	0.705	0.87
450_L	454_S	0.703	0.87
401_R	404_F	0.703	0.87
469_A	473_Q	0.697	0.86
364_N	367_K	0.695	0.86
67_I	98_L	0.695	0.86
467_Y	470_R	0.692	0.86
104_I	225_F	0.692	0.86
194_I	245_T	0.690	0.86
384_N	387_L	0.687	0.85
435_E	439_L	0.686	0.85
146_L	196_F	0.685	0.85
294_S	298_D	0.684	0.85
309_R	339_E	0.684	0.85
148_R	203_E	0.683	0.85
269_Q	275_Y	0.683	0.85
206_R	210_Q	0.682	0.85
465_A	472_D	0.681	0.85
149_A	197_T	0.681	0.85
272_E	279_A	0.680	0.85
284_M	351_D	0.678	0.85
303_G	308_Q	0.676	0.85
268_V	276_L	0.676	0.85
286_N	290_N	0.675	0.84
152_D	192_G	0.673	0.84
163_G	169_L	0.672	0.84
341_G	397_N	0.668	0.84
284_M	321_E	0.668	0.84
72_L	75_Y	0.667	0.84
453_A	457_V	0.667	0.84
466_R	469_A	0.666	0.84
127_E	274_F	0.665	0.84
304_N	308_Q	0.663	0.83
114_V	134_M	0.663	0.83
221_A	244_L	0.663	0.83
401_R	405_N	0.662	0.83
402_Y	412_G	0.662	0.83
409_D	412_G	0.662	0.83
470_R	474_L	0.660	0.83
431_A	467_Y	0.659	0.83
376_P	379_Q	0.656	0.83
398_I	402_Y	0.655	0.83
465_A	468_D	0.655	0.83
334_P	338_A	0.653	0.82
70_P	74_Q	0.653	0.82
477_L	480_R	0.652	0.82
185_T	189_T	0.651	0.82
289_R	293_T	0.651	0.82
83_L	134_M	0.650	0.82
187_A	243_L	0.649	0.82
276_L	281_T	0.649	0.82
164_A	167_S	0.649	0.82
299_E	307_Q	0.648	0.82
75_Y	127_E	0.648	0.82
292_L	322_A	0.647	0.82
464_Q	467_Y	0.646	0.82
279_A	310_A	0.646	0.82
344_W	347_D	0.646	0.82
354_L	388_Q	0.645	0.82
110_F	146_L	0.643	0.81
209_I	219_P	0.642	0.81
149_A	242_I	0.640	0.81
332_L	352_I	0.639	0.81
71_L	351_D	0.637	0.81
83_L	221_A	0.635	0.81
308_Q	312_Q	0.633	0.80
171_A	182_L	0.633	0.80
467_Y	471_I	0.633	0.80
292_L	299_E	0.631	0.80
363_I	386_Y	0.630	0.80
401_R	416_L	0.630	0.80
335_L	345_Y	0.625	0.80
242_I	256_A	0.625	0.80
274_F	278_K	0.623	0.79
431_A	466_R	0.623	0.79
203_E	206_R	0.621	0.79
104_I	229_L	0.621	0.79
143_Q	148_R	0.620	0.79
110_F	113_N	0.619	0.79
254_A	257_R	0.618	0.79
132_S	256_A	0.617	0.79
451_S	479_E	0.617	0.79
255_D	258_N	0.616	0.79
269_Q	273_D	0.616	0.79
115_V	226_L	0.616	0.79
135_A	139_S	0.614	0.78
211_V	215_S	0.614	0.78
384_N	415_L	0.614	0.78
437_Y	445_Q	0.611	0.78
451_S	454_S	0.609	0.78
127_E	130_L	0.608	0.78
238_R	244_L	0.608	0.78
437_Y	440_A	0.608	0.78
380_L	402_Y	0.608	0.78
95_H	408_D	0.607	0.78
94_F	138_I	0.607	0.78
209_I	260_A	0.607	0.78
345_Y	434_A	0.606	0.78
139_S	143_Q	0.605	0.77
282_L	288_G	0.605	0.77
354_L	384_N	0.604	0.77
237_S	244_L	0.604	0.77
167_S	171_A	0.603	0.77
255_D	259_R	0.601	0.77
331_T	335_L	0.599	0.77
146_L	150_M	0.596	0.76
284_M	348_L	0.593	0.76
370_R	382_L	0.591	0.76
109_F	113_N	0.589	0.76
272_E	283_G	0.587	0.75
413_W	435_E	0.586	0.75
414_D	418_Q	0.585	0.75
388_Q	415_L	0.583	0.75
173_A	378_L	0.583	0.75
131_A	215_S	0.582	0.75
379_Q	402_Y	0.581	0.75
272_E	339_E	0.579	0.74
208_G	216_G	0.579	0.74
318_Q	322_A	0.579	0.74
73_T	76_I	0.578	0.74
230_L	249_P	0.578	0.74
191_Q	243_L	0.578	0.74
132_S	226_L	0.576	0.74
276_L	283_G	0.574	0.74
229_L	249_P	0.572	0.73
393_Q	396_A	0.572	0.73
216_G	248_L	0.572	0.73
421_A	429_E	0.571	0.73
121_F	278_K	0.571	0.73
429_E	432_A	0.570	0.73
150_M	154_Q	0.570	0.73
387_L	395_A	0.569	0.73
387_L	399_L	0.568	0.73
396_A	400_N	0.568	0.73
260_A	441_G	0.568	0.73
394_E	398_I	0.567	0.73
323_N	356_Q	0.567	0.73
376_P	402_Y	0.567	0.73
229_L	233_A	0.567	0.73
220_Q	260_A	0.566	0.73
177_A	438_A	0.565	0.73
403_T	416_L	0.564	0.72
149_A	152_D	0.564	0.72
272_E	278_K	0.563	0.72
426_R	456_Q	0.562	0.72
420_E	423_L	0.560	0.72
299_E	311_A	0.557	0.71
231_D	234_R	0.557	0.71
191_Q	194_I	0.556	0.71
128_S	274_F	0.556	0.71
130_L	229_L	0.554	0.71
429_E	433_R	0.552	0.71
328_A	352_I	0.552	0.71
320_M	356_Q	0.551	0.71
384_N	418_Q	0.551	0.71
158_P	162_V	0.551	0.71
476_Q	479_E	0.550	0.71
209_I	480_R	0.550	0.71
240_P	244_L	0.550	0.71
279_A	283_G	0.549	0.70
383_A	416_L	0.548	0.70
68_N	73_T	0.547	0.70
466_R	472_D	0.546	0.70
123_Y	232_Q	0.545	0.70
79_L	83_L	0.545	0.70
473_Q	477_L	0.545	0.70
414_D	433_R	0.545	0.70
320_M	347_D	0.545	0.70
143_Q	259_R	0.545	0.70
72_L	156_S	0.545	0.70
169_L	422_A	0.544	0.70
315_R	331_T	0.543	0.70
386_Y	391_Q	0.543	0.70
80_G	97_F	0.542	0.69
73_T	419_A	0.542	0.69
267_V	270_S	0.541	0.69
434_A	441_G	0.541	0.69
84_V	90_V	0.540	0.69
73_T	77_N	0.539	0.69
99_I	229_L	0.538	0.69
79_L	274_F	0.538	0.69
199_Q	203_E	0.537	0.69
438_A	470_R	0.537	0.69
468_D	474_L	0.537	0.69
74_Q	78_S	0.537	0.69
71_L	278_K	0.536	0.69
72_L	279_A	0.536	0.69
169_L	172_M	0.535	0.68
452_S	455_S	0.535	0.68
126_N	228_K	0.535	0.68
200_N	203_E	0.535	0.68
452_S	456_Q	0.534	0.68
75_Y	130_L	0.533	0.68
454_S	467_Y	0.532	0.68
96_F	114_V	0.532	0.68
324_K	330_K	0.530	0.68
363_I	370_R	0.529	0.68
377_V	381_N	0.528	0.67
283_G	321_E	0.527	0.67
445_Q	449_L	0.526	0.67
332_L	353_D	0.526	0.67
292_L	296_L	0.526	0.67
150_M	153_Q	0.525	0.67
293_T	308_Q	0.525	0.67
462_L	465_A	0.524	0.67
366_L	385_A	0.524	0.67
326_D	356_Q	0.524	0.67
86_H	214_R	0.523	0.67
227_E	230_L	0.523	0.67
316_A	349_A	0.523	0.67
364_N	371_D	0.522	0.67
119_A	407_K	0.522	0.67
111_G	196_F	0.519	0.66
105_N	247_P	0.518	0.66
289_R	326_D	0.517	0.66
299_E	315_R	0.517	0.66
354_L	381_N	0.517	0.66
299_E	303_G	0.516	0.66
165_L	168_I	0.516	0.66
475_R	479_E	0.515	0.66
205_D	252_R	0.515	0.66
117_H	203_E	0.515	0.66
277_A	281_T	0.514	0.65
197_T	245_T	0.514	0.65
326_D	358_K	0.514	0.65
380_L	406_N	0.513	0.65
171_A	177_A	0.513	0.65
432_A	435_E	0.513	0.65
158_P	166_G	0.512	0.65
375_N	379_Q	0.512	0.65
299_E	308_Q	0.512	0.65
209_I	242_I	0.510	0.65
383_A	398_I	0.510	0.65
348_L	351_D	0.509	0.65
466_R	470_R	0.509	0.65
289_R	322_A	0.508	0.64
105_N	252_R	0.507	0.64
132_S	347_D	0.507	0.64
439_L	450_L	0.507	0.64
117_H	245_T	0.506	0.64
213_Q	264_R	0.505	0.64
246_H	252_R	0.505	0.64
233_A	236_S	0.505	0.64
159_L	162_V	0.504	0.64
428_Q	463_Q	0.503	0.64
109_F	112_G	0.503	0.64
108_A	144_R	0.503	0.64
149_A	193_M	0.502	0.64
106_A	252_R	0.500	0.63

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3c37_A	1	0.4559	100	0.639	Contact Map
4aw6_A	1	0.4887	99.9	0.788	Contact Map
4il3_A	1	0.4764	99.9	0.789	Contact Map
3ieg_A	1	0.4394	99.7	0.853	Contact Map
3as5_A	1	0.3737	99.7	0.853	Contact Map
2y4t_A	1	0.4415	99.7	0.854	Contact Map
1w3b_A	1	0.5708	99.7	0.858	Contact Map
4gyw_A	1	0.3717	99.7	0.86	Contact Map
2pl2_A	1	0.3409	99.7	0.861	Contact Map
2ho1_A	1	0.4148	99.6	0.861	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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