PTXBC - BACSU - GREMLIN Contacts

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PTXBC - Putative PTS system EIIBC component YbbF

UniProt:	Q797S1	Sequences: MSKENNYHHLAQKILELCGGKSNISSYTHCMTRLRITPYDESKADAQALRKLDGVLGVVEAETLQIILGTGVVNHVTAAFSKLVSAEEGADVKEAAAKKKADINRKNATPFKLFLRKIASIFIPLIPALVASGLITGITKAIIQAGWLSADSQIAIILTVIGSGLFTYLGILVGINASKEFGGTPALGALAGILIINPEIAKISLFGEELLPGRGGLIGVLFAAIFIAYTEQFIRRFIPQSLDIIVTPTVSLLITGIVTYVVFMPLGGFISDAITSGLLSILDIGGIAAGFILGATFLPLVVTGLHQGLTPVHMELINSIGNDPLLPILAMGGAGQVGAAFAVFVKTKKTTLRKAIAGGLPSGLLGIGEPLIFGVTLPLGRPFLTACLGAGIGGAFQAYFQVATIAIGVSGLPLSFLVLPSQIILYIVGLFISYAAGFLLTYAFGYKDEMASQFD	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	455 (435)
Sequences:	3329 (2119)
Seq/√Len:	101.6

ECOLI - PTV3B PTTBC PTIBC PTYBC PTGCB
BACSU - PTXBC PTV3B PTSBC PTTBC SACX

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
45_D	48_A	4.505	1.00
396_F	432_I	4.056	1.00
389_G	436_A	3.805	1.00
295_A	391_G	3.667	1.00
9_H	13_K	3.589	1.00
342_A	438_F	3.541	1.00
223_A	259_T	3.393	1.00
38_P	44_A	3.259	1.00
250_V	254_I	3.151	1.00
41_E	60_E	3.124	1.00
396_F	425_L	3.044	1.00
15_L	80_F	2.946	1.00
17_L	45_D	2.880	1.00
47_Q	50_R	2.864	1.00
174_G	188_G	2.825	1.00
10_L	52_L	2.812	1.00
392_I	436_A	2.804	1.00
46_A	64_L	2.761	1.00
227_I	251_S	2.669	1.00
40_D	43_K	2.640	1.00
385_T	444_F	2.529	1.00
108_A	113_L	2.511	1.00
57_G	67_I	2.490	1.00
336_Q	376_T	2.486	1.00
79_A	82_K	2.470	1.00
238_I	246_V	2.435	1.00
53_D	351_T	2.430	1.00
8_H	12_Q	2.414	1.00
396_F	400_F	2.411	1.00
233_F	237_F	2.374	1.00
36_I	66_I	2.333	1.00
234_I	250_V	2.323	1.00
316_L	323_D	2.319	1.00
400_F	425_L	2.293	1.00
175_I	189_A	2.276	1.00
226_F	258_V	2.276	1.00
25_S	39_Y	2.266	1.00
235_R	243_D	2.250	1.00
21_K	85_S	2.248	1.00
46_A	50_R	2.193	1.00
17_L	52_L	2.185	1.00
17_L	48_A	2.181	1.00
36_I	80_F	2.161	1.00
8_H	79_A	2.154	1.00
280_S	284_I	2.137	1.00
46_A	60_E	2.133	1.00
18_C	36_I	2.103	1.00
175_I	185_P	2.087	1.00
171_I	193_I	2.081	1.00
427_I	431_F	2.035	1.00
79_A	83_L	2.034	1.00
27_Y	80_F	2.025	1.00
294_G	390_A	2.020	1.00
204_S	207_G	2.013	1.00
242_L	246_V	1.962	1.00
15_L	84_V	1.951	1.00
14_I	49_L	1.932	1.00
12_Q	83_L	1.931	1.00
347_T	352_L	1.930	1.00
13_K	52_L	1.922	1.00
439_L	443_A	1.915	1.00
117_K	181_F	1.893	1.00
27_Y	36_I	1.872	1.00
338_G	434_Y	1.823	1.00
397_Q	429_G	1.819	1.00
142_I	147_W	1.813	1.00
171_I	189_A	1.772	1.00
269_F	273_A	1.771	1.00
26_S	37_T	1.741	1.00
49_L	52_L	1.736	1.00
385_T	440_L	1.727	1.00
290_G	394_G	1.726	1.00
229_Y	233_F	1.713	1.00
440_L	444_F	1.680	1.00
229_Y	232_Q	1.678	1.00
222_F	267_G	1.676	1.00
372_I	383_F	1.671	1.00
136_T	163_S	1.663	1.00
322_N	403_A	1.655	1.00
13_K	16_E	1.648	1.00
48_A	51_K	1.633	1.00
234_I	238_I	1.629	1.00
29_H	77_T	1.625	1.00
425_L	428_V	1.624	1.00
77_T	81_S	1.624	1.00
183_G	224_A	1.612	1.00
344_F	357_A	1.608	1.00
379_L	382_P	1.602	1.00
138_I	142_I	1.600	1.00
338_G	437_G	1.582	1.00
12_Q	16_E	1.582	1.00
436_A	440_L	1.563	1.00
157_I	210_L	1.557	1.00
299_P	387_C	1.516	1.00
178_S	224_A	1.515	1.00
225_I	228_A	1.511	1.00
384_L	388_L	1.511	1.00
349_K	352_L	1.508	1.00
14_I	68_L	1.496	1.00
337_V	363_G	1.493	1.00
246_V	250_V	1.489	1.00
116_R	180_E	1.484	1.00
291_F	395_A	1.476	1.00
110_P	113_L	1.472	1.00
59_V	67_I	1.468	1.00
272_D	276_S	1.466	1.00
341_F	360_L	1.465	1.00
18_C	38_P	1.463	1.00
179_K	185_P	1.459	1.00
11_A	80_F	1.456	1.00
340_A	371_L	1.455	1.00
134_L	249_T	1.444	1.00
230_T	255_T	1.442	1.00
298_L	333_G	1.432	1.00
385_T	389_G	1.383	1.00
24_I	86_A	1.380	1.00
225_I	229_Y	1.343	0.99
352_L	379_L	1.336	0.99
379_L	446_Y	1.335	0.99
395_A	399_Y	1.324	0.99
273_A	277_G	1.322	0.99
389_G	437_G	1.297	0.99
175_I	186_A	1.294	0.99
343_V	347_T	1.289	0.99
226_F	263_F	1.282	0.99
435_A	439_L	1.279	0.99
330_A	426_Y	1.277	0.99
396_F	429_G	1.274	0.99
290_G	395_A	1.269	0.99
230_T	254_I	1.267	0.99
177_A	225_I	1.265	0.99
27_Y	81_S	1.261	0.99
15_L	83_L	1.259	0.99
396_F	428_V	1.257	0.99
183_G	227_I	1.243	0.99
188_G	192_G	1.242	0.99
191_A	252_L	1.240	0.99
178_S	188_G	1.239	0.99
110_P	114_F	1.228	0.99
49_L	64_L	1.223	0.99
176_N	186_A	1.219	0.99
295_A	299_P	1.217	0.99
345_V	438_F	1.217	0.99
291_F	391_G	1.205	0.99
392_I	432_I	1.192	0.99
346_K	446_Y	1.173	0.98
342_A	442_Y	1.171	0.98
173_V	217_L	1.170	0.98
438_F	442_Y	1.165	0.98
24_I	84_V	1.165	0.98
381_R	445_G	1.152	0.98
255_T	259_T	1.151	0.98
161_I	256_G	1.151	0.98
122_F	217_L	1.148	0.98
346_K	445_G	1.147	0.98
49_L	55_V	1.146	0.98
15_L	24_I	1.140	0.98
243_D	247_T	1.136	0.98
10_L	54_G	1.135	0.98
17_L	49_L	1.134	0.98
149_S	152_S	1.132	0.98
125_L	169_L	1.123	0.98
11_A	83_L	1.118	0.98
52_L	55_V	1.113	0.98
132_S	165_L	1.111	0.98
274_I	300_L	1.104	0.98
181_F	228_A	1.102	0.98
277_G	280_S	1.101	0.98
13_K	48_A	1.099	0.98
177_A	181_F	1.098	0.97
9_H	12_Q	1.094	0.97
178_S	185_P	1.093	0.97
178_S	183_G	1.089	0.97
388_L	440_L	1.081	0.97
68_L	76_V	1.078	0.97
81_S	86_A	1.071	0.97
182_G	232_Q	1.065	0.97
233_F	236_R	1.061	0.97
135_I	162_G	1.059	0.97
389_G	393_G	1.054	0.97
339_A	376_T	1.053	0.97
181_F	225_I	1.053	0.97
192_G	220_V	1.050	0.97
80_F	84_V	1.050	0.97
228_A	232_Q	1.050	0.97
385_T	441_T	1.047	0.97
31_M	367_I	1.043	0.97
393_G	433_S	1.043	0.97
194_L	256_G	1.041	0.97
422_Q	425_L	1.038	0.96
184_T	231_E	1.038	0.96
278_L	324_P	1.036	0.96
234_I	247_T	1.036	0.96
164_G	193_I	1.033	0.96
139_T	155_A	1.033	0.96
267_G	271_S	1.033	0.96
331_M	397_Q	1.030	0.96
338_G	364_L	1.029	0.96
191_A	255_T	1.029	0.96
8_H	83_L	1.028	0.96
125_L	176_N	1.025	0.96
262_V	266_L	1.022	0.96
355_A	365_L	1.018	0.96
80_F	83_L	1.017	0.96
218_I	222_F	1.016	0.96
163_S	197_N	1.011	0.96
376_T	382_P	1.011	0.96
78_A	82_K	1.009	0.96
21_K	84_V	1.007	0.96
285_G	288_A	1.006	0.96
270_I	273_A	1.006	0.96
117_K	121_I	1.005	0.96
315_E	319_S	1.004	0.96
7_Y	71_G	1.004	0.96
300_L	309_L	1.003	0.96
358_G	362_S	1.002	0.96
71_G	75_H	1.001	0.96
424_I	428_V	0.999	0.96
347_T	448_D	0.989	0.95
183_G	188_G	0.985	0.95
71_G	240_Q	0.982	0.95
338_G	342_A	0.982	0.95
191_A	220_V	0.981	0.95
291_F	392_I	0.978	0.95
287_I	399_Y	0.978	0.95
218_I	267_G	0.978	0.95
372_I	386_A	0.977	0.95
163_S	167_T	0.969	0.95
102_D	105_R	0.968	0.95
177_A	221_L	0.962	0.95
343_V	375_V	0.957	0.94
14_I	52_L	0.955	0.94
290_G	398_A	0.955	0.94
381_R	447_K	0.952	0.94
400_F	432_I	0.951	0.94
224_A	228_A	0.950	0.94
356_I	360_L	0.949	0.94
360_L	364_L	0.948	0.94
324_P	327_P	0.946	0.94
410_S	414_L	0.944	0.94
58_V	64_L	0.944	0.94
107_N	113_L	0.940	0.94
74_N	78_A	0.940	0.94
172_L	190_L	0.937	0.94
332_G	336_Q	0.937	0.94
205_L	261_V	0.934	0.94
8_H	82_K	0.930	0.94
120_S	180_E	0.929	0.94
41_E	64_L	0.928	0.94
382_P	385_T	0.924	0.93
168_Y	198_P	0.919	0.93
290_G	294_G	0.914	0.93
213_G	219_G	0.910	0.93
10_L	14_I	0.908	0.93
182_G	188_G	0.908	0.93
402_V	429_G	0.906	0.93
335_G	386_A	0.902	0.93
240_Q	243_D	0.900	0.92
352_L	448_D	0.897	0.92
16_E	48_A	0.894	0.92
154_I	157_I	0.893	0.92
235_R	247_T	0.892	0.92
121_I	221_L	0.890	0.92
299_P	303_T	0.888	0.92
226_F	255_T	0.884	0.92
11_A	79_A	0.884	0.92
141_A	145_A	0.882	0.92
171_I	192_G	0.882	0.92
360_L	363_G	0.882	0.92
368_G	371_L	0.882	0.92
25_S	37_T	0.880	0.92
339_A	382_P	0.879	0.92
432_I	436_A	0.877	0.91
393_G	432_I	0.877	0.91
220_V	224_A	0.873	0.91
382_P	441_T	0.872	0.91
336_Q	386_A	0.871	0.91
287_I	395_A	0.864	0.91
410_S	413_P	0.863	0.91
339_A	386_A	0.862	0.91
334_A	337_V	0.859	0.91
132_S	164_G	0.858	0.91
46_A	58_V	0.858	0.91
299_P	383_F	0.853	0.90
161_I	194_L	0.851	0.90
50_R	378_P	0.845	0.90
173_V	220_V	0.838	0.89
38_P	64_L	0.835	0.89
290_G	328_I	0.835	0.89
27_Y	84_V	0.834	0.89
196_I	214_R	0.833	0.89
67_I	373_F	0.830	0.89
13_K	17_L	0.829	0.89
433_S	437_G	0.828	0.89
413_P	416_F	0.828	0.89
18_C	64_L	0.826	0.89
183_G	231_E	0.825	0.89
121_I	181_F	0.824	0.89
352_L	375_V	0.823	0.89
174_G	224_A	0.821	0.89
238_I	242_L	0.820	0.88
160_V	197_N	0.817	0.88
424_I	427_I	0.816	0.88
392_I	396_F	0.811	0.88
226_F	230_T	0.810	0.88
49_L	66_I	0.809	0.88
279_L	283_D	0.808	0.88
349_K	353_R	0.807	0.88
344_F	353_R	0.807	0.88
330_A	414_L	0.804	0.87
13_K	53_D	0.802	0.87
230_T	234_I	0.799	0.87
106_K	113_L	0.797	0.87
281_I	292_I	0.796	0.87
114_F	117_K	0.793	0.87
172_L	193_I	0.792	0.87
346_K	442_Y	0.792	0.87
296_T	387_C	0.789	0.86
60_E	64_L	0.789	0.86
350_T	353_R	0.789	0.86
343_V	352_L	0.789	0.86
116_R	120_S	0.789	0.86
273_A	276_S	0.787	0.86
106_K	110_P	0.785	0.86
263_F	267_G	0.784	0.86
222_F	263_F	0.777	0.86
100_K	104_N	0.777	0.86
411_G	416_F	0.777	0.86
331_M	393_G	0.774	0.85
106_K	109_T	0.772	0.85
411_G	417_L	0.769	0.85
172_L	189_A	0.769	0.85
41_E	46_A	0.768	0.85
376_T	386_A	0.767	0.85
146_G	150_A	0.766	0.85
408_G	417_L	0.765	0.85
75_H	240_Q	0.764	0.85
254_I	257_I	0.762	0.85
242_L	365_L	0.760	0.84
44_A	58_V	0.760	0.84
258_V	263_F	0.759	0.84
238_I	247_T	0.759	0.84
341_F	345_V	0.758	0.84
410_S	417_L	0.758	0.84
174_G	220_V	0.756	0.84
397_Q	402_V	0.756	0.84
15_L	18_C	0.753	0.84
238_I	250_V	0.752	0.84
105_R	113_L	0.748	0.83
405_I	409_V	0.746	0.83
187_L	227_I	0.746	0.83
46_A	49_L	0.745	0.83
14_I	17_L	0.745	0.83
141_A	144_Q	0.744	0.83
309_L	313_H	0.744	0.83
434_Y	437_G	0.742	0.83
47_Q	51_K	0.742	0.83
343_V	382_P	0.740	0.83
174_G	192_G	0.739	0.83
230_T	251_S	0.736	0.82
269_F	272_D	0.736	0.82
442_Y	446_Y	0.732	0.82
344_F	356_I	0.728	0.82
44_A	64_L	0.727	0.82
9_H	53_D	0.727	0.82
402_V	425_L	0.724	0.81
115_L	377_L	0.724	0.81
133_G	137_G	0.723	0.81
336_Q	371_L	0.721	0.81
357_A	362_S	0.720	0.81
406_A	417_L	0.717	0.81
12_Q	21_K	0.715	0.81
100_K	103_I	0.713	0.80
375_V	379_L	0.710	0.80
42_S	45_D	0.710	0.80
224_A	227_I	0.709	0.80
442_Y	445_G	0.708	0.80
22_S	43_K	0.706	0.80
68_L	72_V	0.703	0.79
431_F	435_A	0.701	0.79
335_G	339_A	0.700	0.79
213_G	264_M	0.698	0.79
441_T	445_G	0.697	0.79
345_V	442_Y	0.697	0.79
14_I	18_C	0.694	0.79
336_Q	368_G	0.694	0.79
135_I	249_T	0.693	0.78
43_K	51_K	0.693	0.78
389_G	440_L	0.693	0.78
7_Y	72_V	0.693	0.78
31_M	410_S	0.692	0.78
109_T	112_K	0.692	0.78
126_I	411_G	0.683	0.77
8_H	75_H	0.683	0.77
341_F	438_F	0.683	0.77
16_E	45_D	0.681	0.77
315_E	318_N	0.681	0.77
111_F	114_F	0.680	0.77
393_G	429_G	0.677	0.77
308_G	311_P	0.675	0.77
266_L	270_I	0.675	0.77
78_A	81_S	0.674	0.77
298_L	332_G	0.673	0.76
174_G	189_A	0.673	0.76
361_P	365_L	0.670	0.76
89_G	92_V	0.670	0.76
409_V	413_P	0.669	0.76
39_Y	43_K	0.667	0.76
381_R	446_Y	0.666	0.76
22_S	39_Y	0.666	0.76
408_G	413_P	0.666	0.76
21_K	86_A	0.666	0.76
231_E	247_T	0.666	0.76
153_Q	204_S	0.665	0.76
50_R	57_G	0.665	0.76
251_S	255_T	0.664	0.75
218_I	302_V	0.664	0.75
188_G	224_A	0.663	0.75
346_K	448_D	0.663	0.75
30_C	33_R	0.661	0.75
287_I	291_F	0.660	0.75
50_R	58_V	0.660	0.75
271_S	305_L	0.659	0.75
298_L	336_Q	0.659	0.75
117_K	225_I	0.658	0.75
355_A	361_P	0.655	0.75
175_I	179_K	0.655	0.75
165_L	172_L	0.655	0.75
239_P	242_L	0.655	0.75
293_L	300_L	0.654	0.74
81_S	84_V	0.652	0.74
331_M	433_S	0.652	0.74
335_G	389_G	0.651	0.74
268_G	272_D	0.651	0.74
136_T	197_N	0.650	0.74
334_A	434_Y	0.647	0.74
353_R	357_A	0.647	0.74
48_A	52_L	0.647	0.74
154_I	206_F	0.646	0.73
276_S	279_L	0.645	0.73
356_I	361_P	0.645	0.73
129_L	378_P	0.644	0.73
415_S	427_I	0.643	0.73
51_K	351_T	0.641	0.73
167_T	214_R	0.640	0.73
275_T	309_L	0.638	0.73
301_V	336_Q	0.638	0.73
349_K	448_D	0.637	0.72
363_G	368_G	0.633	0.72
39_Y	86_A	0.632	0.72
122_F	311_P	0.631	0.72
200_I	260_Y	0.631	0.72
357_A	361_P	0.630	0.72
204_S	208_E	0.630	0.72
384_L	387_C	0.628	0.71
10_L	68_L	0.628	0.71
10_L	13_K	0.627	0.71
378_P	382_P	0.627	0.71
338_G	433_S	0.625	0.71
82_K	85_S	0.624	0.71
81_S	85_S	0.623	0.71
296_T	299_P	0.622	0.71
134_L	137_G	0.621	0.71
137_G	290_G	0.619	0.70
134_L	200_I	0.618	0.70
411_G	414_L	0.618	0.70
414_L	418_V	0.618	0.70
36_I	64_L	0.618	0.70
444_F	448_D	0.615	0.70
136_T	167_T	0.615	0.70
346_K	381_R	0.615	0.70
11_A	84_V	0.614	0.70
203_I	207_G	0.614	0.70
316_L	320_I	0.614	0.70
425_L	432_I	0.612	0.69
156_I	159_T	0.612	0.69
298_L	383_F	0.612	0.69
274_I	419_L	0.610	0.69
284_I	288_A	0.610	0.69
30_C	35_R	0.609	0.69
357_A	365_L	0.609	0.69
114_F	240_Q	0.608	0.69
305_L	312_V	0.608	0.69
293_L	328_I	0.608	0.69
165_L	169_L	0.607	0.69
332_G	390_A	0.607	0.69
18_C	24_I	0.607	0.69
34_L	68_L	0.607	0.69
109_T	113_L	0.606	0.69
392_I	395_A	0.606	0.69
298_L	372_I	0.605	0.69
388_L	391_G	0.604	0.68
161_I	255_T	0.603	0.68
183_G	228_A	0.603	0.68
394_G	398_A	0.601	0.68
390_A	394_G	0.601	0.68
129_L	307_Q	0.598	0.68
15_L	21_K	0.598	0.68
295_A	298_L	0.597	0.68
339_A	441_T	0.596	0.67
431_F	439_L	0.595	0.67
340_A	376_T	0.595	0.67
333_G	368_G	0.595	0.67
230_T	258_V	0.594	0.67
410_S	418_V	0.593	0.67
17_L	51_K	0.593	0.67
12_Q	24_I	0.592	0.67
178_S	227_I	0.592	0.67
103_I	106_K	0.591	0.67
57_G	303_T	0.591	0.67
129_L	165_L	0.590	0.67
277_G	281_I	0.590	0.67
166_F	169_L	0.587	0.66
13_K	55_V	0.587	0.66
244_I	247_T	0.586	0.66
276_S	280_S	0.586	0.66
39_Y	92_V	0.586	0.66
17_L	44_A	0.585	0.66
332_G	368_G	0.584	0.66
10_L	76_V	0.584	0.66
126_I	366_G	0.583	0.66
280_S	286_G	0.583	0.66
376_T	383_F	0.582	0.66
402_V	423_I	0.581	0.65
11_A	82_K	0.580	0.65
294_G	391_G	0.580	0.65
182_G	185_P	0.577	0.65
7_Y	76_V	0.577	0.65
343_V	379_L	0.576	0.65
164_G	194_L	0.576	0.65
407_I	414_L	0.576	0.65
258_V	262_V	0.576	0.65
430_L	433_S	0.575	0.65
145_A	148_L	0.575	0.65
44_A	66_I	0.574	0.65
22_S	91_D	0.573	0.64
355_A	362_S	0.572	0.64
173_V	177_A	0.570	0.64
272_D	319_S	0.567	0.64
404_T	417_L	0.567	0.64
154_I	205_L	0.566	0.63
126_I	130_V	0.563	0.63
432_I	435_A	0.562	0.63
137_G	328_I	0.561	0.63
415_S	430_L	0.561	0.63
303_T	373_F	0.559	0.63
381_R	448_D	0.559	0.63
204_S	209_E	0.559	0.63
293_L	309_L	0.558	0.62
71_G	74_N	0.557	0.62
291_F	294_G	0.557	0.62
184_T	235_R	0.556	0.62
131_A	249_T	0.556	0.62
17_L	47_Q	0.555	0.62
323_D	327_P	0.554	0.62
313_H	323_D	0.554	0.62
444_F	449_E	0.554	0.62
325_L	329_L	0.552	0.62
362_S	365_L	0.552	0.62
43_K	66_I	0.552	0.62
41_E	44_A	0.552	0.62
138_I	141_A	0.551	0.61
128_A	190_L	0.550	0.61
342_A	441_T	0.550	0.61
346_K	349_K	0.550	0.61
80_F	85_S	0.549	0.61
24_I	81_S	0.549	0.61
157_I	203_I	0.548	0.61
219_G	264_M	0.548	0.61
127_P	130_V	0.548	0.61
310_T	314_M	0.548	0.61
278_L	312_V	0.548	0.61
339_A	385_T	0.547	0.61
226_F	229_Y	0.547	0.61
10_L	17_L	0.547	0.61
105_R	108_A	0.545	0.61
153_Q	392_I	0.544	0.60
346_K	447_K	0.544	0.60
301_V	332_G	0.544	0.60
222_F	225_I	0.542	0.60
295_A	387_C	0.542	0.60
294_G	394_G	0.542	0.60
413_P	418_V	0.542	0.60
153_Q	203_I	0.542	0.60
182_G	231_E	0.541	0.60
31_M	244_I	0.541	0.60
382_P	386_A	0.541	0.60
81_S	88_E	0.540	0.60
143_I	155_A	0.538	0.60
167_T	197_N	0.537	0.59
191_A	223_A	0.537	0.59
297_F	328_I	0.536	0.59
12_Q	79_A	0.534	0.59
363_G	371_L	0.533	0.59
164_G	190_L	0.532	0.59
292_I	296_T	0.531	0.59
121_I	177_A	0.531	0.59
358_G	361_P	0.531	0.59
158_L	206_F	0.530	0.58
355_A	358_G	0.530	0.58
43_K	49_L	0.529	0.58
363_G	372_I	0.529	0.58
416_F	419_L	0.528	0.58
343_V	376_T	0.528	0.58
85_S	89_G	0.528	0.58
38_P	60_E	0.527	0.58
352_L	356_I	0.526	0.58
231_E	235_R	0.526	0.58
207_G	210_L	0.526	0.58
183_G	251_S	0.525	0.58
340_A	344_F	0.524	0.58
83_L	86_A	0.523	0.57
67_I	303_T	0.523	0.57
234_I	237_F	0.523	0.57
7_Y	79_A	0.523	0.57
332_G	372_I	0.521	0.57
147_W	152_S	0.520	0.57
42_S	49_L	0.519	0.57
389_G	392_I	0.519	0.57
266_L	269_F	0.518	0.57
10_L	49_L	0.518	0.57
167_T	198_P	0.517	0.57
185_P	224_A	0.517	0.57
333_G	411_G	0.516	0.56
351_T	354_K	0.514	0.56
153_Q	156_I	0.514	0.56
289_A	323_D	0.514	0.56
334_A	430_L	0.514	0.56
332_G	386_A	0.513	0.56
445_G	448_D	0.513	0.56
121_I	137_G	0.512	0.56
182_G	224_A	0.512	0.56
383_F	386_A	0.511	0.56
7_Y	240_Q	0.511	0.56
293_L	329_L	0.510	0.56
210_L	261_V	0.509	0.55
371_L	376_T	0.509	0.55
356_I	363_G	0.509	0.55
364_L	434_Y	0.508	0.55
177_A	256_G	0.507	0.55
275_T	312_V	0.507	0.55
357_A	360_L	0.507	0.55
416_F	420_P	0.506	0.55
139_T	162_G	0.506	0.55
255_T	258_V	0.506	0.55
175_I	224_A	0.505	0.55
171_I	174_G	0.504	0.55
68_L	71_G	0.503	0.55
408_G	414_L	0.503	0.55
409_V	417_L	0.503	0.55
249_T	252_L	0.502	0.54
314_M	318_N	0.500	0.54

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3qnqA	2	0.789	100	0.649	Contact Map
3ipjA	1	0.2044	100	0.802	Contact Map
1ibaA	1	0.167	99.9	0.806	Contact Map
3bp3A	1	0.1758	99.9	0.808	Contact Map
4n8nA	1	0.1165	46	0.973	Contact Map
4nejA	1	0.233	38.5	0.974	Contact Map
2h8eA	2	0.1978	37	0.975	Contact Map
4nv5A	1	0.1429	23.9	0.977	Contact Map
3u12A	2	0.1341	22.9	0.977	Contact Map
1kftA	1	0.1011	20	0.978	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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