GREMLIN Database
LTAS1 - Lipoteichoic acid synthase 1
UniProt: Q797B3 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 639 (529)
Sequences: 4182 (3441)
Seq/√Len: 149.6

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
286_D518_H6.5461.00
271_F450_E5.7841.00
333_D363_D5.6271.00
532_H547_D4.3991.00
397_E459_A4.2931.00
271_F274_K3.9681.00
249_I469_I3.9081.00
521_G548_L3.6061.00
20_W23_T3.4911.00
247_I467_I3.4561.00
246_I534_E3.3331.00
278_G457_K3.3171.00
339_T401_Q3.1371.00
244_K464_N3.0781.00
246_I332_L3.0271.00
393_I455_E3.0011.00
251_L254_F2.9911.00
288_F521_G2.9601.00
454_K457_K2.9251.00
260_D269_T2.9131.00
450_E454_K2.9001.00
245_N465_S2.7841.00
457_K462_Y2.7481.00
367_D370_T2.5361.00
454_K458_E2.4581.00
247_I465_S2.4151.00
332_L534_E2.3751.00
462_Y508_R2.3461.00
451_Q454_K2.3351.00
245_N403_F2.2871.00
267_E273_N2.2501.00
466_V507_I2.1651.00
135_V139_R2.1461.00
23_T26_S2.1141.00
23_T27_Y2.1051.00
315_S318_V2.1011.00
509_V512_K2.0941.00
130_I134_A2.0731.00
468_M507_I2.0361.00
85_N95_F1.9701.00
248_K404_Y1.9631.00
453_F467_I1.9601.00
456_L467_I1.9541.00
249_I449_L1.9501.00
22_K27_Y1.9491.00
18_L22_K1.9321.00
505_L526_V1.9311.00
262_K284_Y1.9251.00
395_K398_S1.9241.00
393_I459_A1.9181.00
352_N355_Q1.8781.00
420_E423_A1.8761.00
389_F409_T1.8701.00
269_T273_N1.8331.00
250_H301_E1.8291.00
288_F505_L1.8181.00
161_A165_I1.8051.00
274_K278_G1.7911.00
16_V20_W1.7691.00
17_I23_T1.7621.00
22_K26_S1.7611.00
242_K464_N1.7581.00
391_E394_P1.7541.00
37_G41_E1.7521.00
412_N442_A1.7511.00
419_D444_Y1.7401.00
23_T28_K1.7361.00
470_Y523_E1.7221.00
353_R357_Y1.7081.00
286_D516_V1.7061.00
16_V22_K1.6781.00
413_H472_D1.6691.00
386_K451_Q1.6591.00
462_Y467_I1.6541.00
22_K25_L1.6541.00
431_G436_D1.6521.00
471_G503_V1.6491.00
455_E458_E1.6391.00
218_D221_S1.6361.00
297_T408_I1.6271.00
109_N113_G1.6161.00
45_I48_P1.6091.00
351_W354_D1.5921.00
274_K450_E1.5911.00
343_L395_K1.5901.00
529_T549_F1.5851.00
452_F467_I1.5811.00
272_L449_L1.5751.00
41_E45_I1.5741.00
258_L442_A1.5721.00
341_A405_A1.5701.00
248_K468_M1.5671.00
22_K28_K1.5601.00
389_F393_I1.5581.00
447_E451_Q1.5551.00
165_I169_Y1.5511.00
312_P316_A1.5501.00
455_E459_A1.5441.00
251_L445_L1.5411.00
260_D273_N1.5351.00
354_D358_K1.5271.00
307_S528_P1.5221.00
271_F453_F1.5211.00
352_N357_Y1.4991.00
34_G38_T1.4971.00
312_P315_S1.4951.00
351_W356_I1.4851.00
254_F445_L1.4841.00
275_L449_L1.4781.00
14_L22_K1.4661.00
395_K399_L1.4631.00
45_I51_S1.4601.00
17_I20_W1.4581.00
389_F452_F1.4451.00
304_M470_Y1.4451.00
347_Y350_F1.4411.00
260_D277_H1.4391.00
251_L449_L1.4381.00
386_K444_Y1.4381.00
274_K277_H1.4361.00
331_I531_L1.4351.00
403_F461_L1.4281.00
466_V509_V1.4271.00
314_G318_V1.4271.00
269_T272_L1.4171.00
45_I56_L1.4141.00
254_F258_L1.4101.00
351_W357_Y1.4071.00
313_E316_A1.3941.00
342_V408_I1.3801.00
246_I466_V1.3751.00
451_Q455_E1.3721.00
470_Y526_V1.3701.00
20_W26_S1.3691.00
20_W27_Y1.3681.00
392_S407_L1.3651.00
26_S29_T1.3561.00
190_Y193_L1.3561.00
110_M113_G1.3541.00
20_W29_T1.3511.00
219_L223_E1.3471.00
38_T41_E1.3461.00
215_S218_D1.3451.00
23_T29_T1.3441.00
22_K29_T1.3371.00
306_N327_S1.3351.00
162_L166_N1.3341.00
260_D267_E1.3331.00
353_R356_I1.3271.00
283_T549_F1.3271.00
517_N521_G1.3221.00
251_L469_I1.3211.00
412_N441_T1.3171.00
492_I495_Y1.3161.00
254_F442_A1.3071.00
164_F168_H1.3071.00
245_N463_D1.3061.00
256_S502_R1.3051.00
38_T43_L1.3031.00
338_Y402_P1.3011.00
134_A138_W1.2801.00
468_M530_L1.2771.00
244_K466_V1.2771.00
48_P59_A1.2761.00
219_L222_V1.2751.00
13_V17_I1.2671.00
304_M526_V1.2651.00
252_E472_D1.2641.00
463_D511_G1.2571.00
352_N356_I1.2531.00
34_G48_P1.2421.00
314_G317_F1.2411.00
196_Y200_D1.2411.00
443_R447_E1.2401.00
271_F454_K1.2401.00
202_V206_Q1.2371.00
449_L469_I1.2321.00
393_I397_E1.2251.00
423_A428_A1.2231.00
189_K194_Y1.2221.00
397_E455_E1.2221.00
388_F407_L1.2201.00
279_G508_R1.2181.00
329_P362_Y1.2061.00
394_P398_S1.2021.00
392_S396_L1.2001.00
328_L530_L1.2001.00
247_I403_F1.1971.00
246_I404_Y1.1931.00
531_L536_I1.1811.00
54_F58_L1.1771.00
275_L453_F1.1751.00
390_T451_Q1.1731.00
53_V57_G1.1721.00
15_A22_K1.1721.00
231_A235_A1.1691.00
283_T515_G1.1671.00
343_L405_A1.1651.00
453_F469_I1.1601.00
254_F272_L1.1601.00
154_L161_A1.1601.00
24_Y27_Y1.1561.00
19_F23_T1.1541.00
342_V357_Y1.1491.00
160_I164_F1.1471.00
275_L506_M1.1471.00
24_Y28_K1.1431.00
237_Y549_F1.1431.00
31_F34_G1.1411.00
254_F269_T1.1411.00
276_A284_Y1.1391.00
250_H470_Y1.1381.00
419_D422_D1.1351.00
391_E395_K1.1341.00
448_A451_Q1.1321.00
148_K152_A1.1321.00
246_I468_M1.1311.00
255_Q474_N1.1311.00
180_R183_D1.1300.99
289_F502_R1.1290.99
90_R122_D1.1250.99
220_T223_E1.1210.99
348_K367_D1.1210.99
16_V26_S1.1190.99
196_Y201_G1.1160.99
123_I127_L1.1150.99
146_K149_K1.1120.99
129_I133_I1.1020.99
424_S443_R1.1020.99
266_E439_F1.0970.99
153_S157_L1.0940.99
350_F353_R1.0930.99
453_F457_K1.0920.99
249_I389_F1.0910.99
332_L531_L1.0890.99
30_E34_G1.0880.99
250_H304_M1.0830.99
223_E227_T1.0820.99
316_A320_K1.0800.99
15_A19_F1.0740.99
336_E536_I1.0620.99
18_L29_T1.0620.99
20_W24_Y1.0600.99
198_I201_G1.0590.99
65_R68_A1.0570.99
287_N502_R1.0550.99
46_F50_S1.0550.99
17_I22_K1.0530.99
349_S354_D1.0530.99
248_K304_M1.0520.99
121_H125_Y1.0520.99
466_V530_L1.0510.99
258_L439_F1.0430.99
183_D189_K1.0410.99
456_L460_G1.0400.99
422_D447_E1.0400.99
157_L161_A1.0370.99
447_E450_E1.0350.99
19_F22_K1.0350.99
50_S56_L1.0320.99
339_T399_L1.0310.99
161_A164_F1.0300.99
283_T517_N1.0300.99
248_K526_V1.0250.99
498_A501_Q1.0250.99
257_F499_Q1.0220.99
218_D223_E1.0220.99
217_D220_T1.0210.99
396_L405_A1.0150.99
14_L26_S1.0100.99
528_P545_G1.0100.99
147_M151_F1.0070.99
315_S319_T1.0060.99
19_F26_S1.0040.99
252_E413_H1.0020.99
525_D545_G1.0020.99
385_D389_F0.9940.99
14_L18_L0.9920.99
214_A218_D0.9900.99
213_Y218_D0.9900.99
250_H406_H0.9890.99
133_I137_I0.9890.99
287_N520_Y0.9880.99
547_D550_S0.9880.99
140_P144_E0.9790.99
191_L195_N0.9740.99
40_Q44_L0.9710.98
123_I126_F0.9680.98
56_L60_L0.9660.98
16_V27_Y0.9650.98
339_T364_K0.9630.98
341_A403_F0.9580.98
362_Y406_H0.9580.98
18_L28_K0.9540.98
348_K354_D0.9540.98
124_F127_L0.9510.98
254_F469_I0.9490.98
200_D203_Q0.9450.98
331_I335_K0.9450.98
456_L461_L0.9390.98
291_Q522_G0.9380.98
341_A399_L0.9330.98
57_G60_L0.9310.98
221_S224_N0.9310.98
399_L403_F0.9300.98
48_P52_A0.9280.98
346_D350_F0.9260.98
120_G124_F0.9220.98
21_A28_K0.9220.98
337_G402_P0.9200.98
426_K430_T0.9190.98
13_V28_K0.9190.98
297_T413_H0.9150.98
295_G299_D0.9140.98
445_L448_A0.9140.98
333_D340_S0.9130.98
284_Y516_V0.9120.98
18_L26_S0.9120.98
341_A364_K0.9120.98
344_H353_R0.9110.98
18_L23_T0.9110.98
254_F259_I0.9100.98
41_E44_L0.9090.98
425_L443_R0.9080.98
270_P446_D0.9070.98
146_K151_F0.9070.98
413_H473_H0.9040.98
357_Y365_F0.9040.98
34_G41_E0.9030.98
16_V19_F0.9020.98
469_I506_M0.9020.98
14_L19_F0.9010.98
222_V225_Y0.8990.97
214_A217_D0.8970.97
38_T42_I0.8960.97
296_K299_D0.8960.97
131_I134_A0.8940.97
276_A506_M0.8940.97
412_N445_L0.8910.97
328_L531_L0.8900.97
197_T200_D0.8890.97
147_M152_A0.8890.97
243_G336_E0.8890.97
387_P390_T0.8830.97
13_V22_K0.8830.97
498_A502_R0.8800.97
158_S161_A0.8800.97
176_Q180_R0.8790.97
41_E48_P0.8780.97
232_K235_A0.8770.97
351_W355_Q0.8740.97
527_M531_L0.8740.97
136_L140_P0.8720.97
386_K447_E0.8710.97
15_A18_L0.8710.97
216_S219_L0.8710.97
339_T363_D0.8660.97
158_S162_L0.8620.97
418_L440_Q0.8620.97
153_S168_H0.8610.97
382_G410_L0.8590.97
476_I500_N0.8550.97
30_E33_L0.8540.97
192_G195_N0.8530.97
245_N402_P0.8530.97
350_F357_Y0.8520.97
394_P397_E0.8460.96
21_A25_L0.8450.96
418_L423_A0.8440.96
317_F320_K0.8420.96
251_L389_F0.8420.96
285_F505_L0.8420.96
13_V16_V0.8370.96
389_F445_L0.8350.96
49_F53_V0.8310.96
256_S284_Y0.8300.96
109_N114_I0.8280.96
11_F27_Y0.8250.96
425_L428_A0.8220.96
310_G314_G0.8220.96
401_Q464_N0.8200.96
231_A234_N0.8200.96
69_I73_I0.8180.96
168_H171_E0.8180.96
417_N437_S0.8160.96
426_K429_T0.8160.96
341_A395_K0.8150.96
44_L47_N0.8140.95
371_Y391_E0.8120.95
182_F185_N0.8110.95
463_D510_P0.8100.95
165_I171_E0.8090.95
213_Y216_S0.8090.95
436_D440_Q0.8090.95
243_G402_P0.8080.95
354_D357_Y0.8040.95
153_S156_I0.8010.95
248_K328_L0.8000.95
448_A452_F0.7990.95
66_K69_I0.7970.95
38_T48_P0.7970.95
387_P391_E0.7950.95
488_L491_E0.7910.95
134_A137_I0.7900.95
12_F22_K0.7890.95
122_D126_F0.7890.95
270_P275_L0.7880.95
423_A430_T0.7880.95
222_V226_T0.7830.94
45_I50_S0.7830.94
449_L453_F0.7820.94
411_T441_T0.7800.94
272_L284_Y0.7760.94
518_H521_G0.7730.94
45_I54_F0.7710.94
154_L158_S0.7710.94
10_S16_V0.7700.94
149_K152_A0.7700.94
343_L366_F0.7690.94
10_S14_L0.7660.94
267_E443_R0.7660.94
114_I117_I0.7650.94
42_I47_N0.7650.94
184_R187_I0.7640.94
11_F15_A0.7630.94
480_H499_Q0.7630.94
24_Y29_T0.7630.94
165_I168_H0.7630.94
146_K152_A0.7600.94
51_S54_F0.7590.93
76_F80_F0.7580.93
180_R184_R0.7560.93
190_Y194_Y0.7560.93
37_G40_Q0.7510.93
10_S22_K0.7510.93
51_S61_L0.7490.93
267_E270_P0.7480.93
306_N356_I0.7460.93
32_N38_T0.7450.93
43_L51_S0.7430.93
272_L506_M0.7430.93
223_E226_T0.7430.93
297_T300_A0.7410.93
148_K151_F0.7390.93
392_S405_A0.7370.92
34_G37_G0.7360.92
216_S223_E0.7350.92
17_I24_Y0.7350.92
197_T201_G0.7330.92
178_L183_D0.7310.92
18_L25_L0.7310.92
328_L527_M0.7310.92
438_Y442_A0.7300.92
177_L180_R0.7290.92
115_F118_M0.7290.92
132_L135_V0.7280.92
503_V523_E0.7260.92
213_Y219_L0.7210.92
366_F370_T0.7180.91
167_L171_E0.7170.91
218_D222_V0.7160.91
497_N500_N0.7140.91
50_S54_F0.7120.91
126_F129_I0.7120.91
184_R193_L0.7110.91
390_T455_E0.7100.91
260_D263_L0.7100.91
275_L469_I0.7080.91
13_V23_T0.7070.91
253_S471_G0.7070.91
130_I133_I0.7040.91
247_I452_F0.7020.91
255_Q438_Y0.7020.91
25_L29_T0.7010.90
17_I26_S0.7010.90
132_L136_L0.7000.90
214_A219_L0.6990.90
45_I49_F0.6970.90
48_P51_S0.6960.90
297_T301_E0.6960.90
156_I159_G0.6950.90
85_N197_T0.6950.90
42_I51_S0.6950.90
276_A286_D0.6920.90
254_F412_N0.6920.90
103_Q106_N0.6900.90
154_L165_I0.6900.90
51_S59_A0.6890.90
21_A26_S0.6880.90
85_N96_L0.6870.90
297_T473_H0.6860.89
499_Q502_R0.6850.89
279_G284_Y0.6840.89
20_W28_K0.6840.89
195_N198_I0.6840.89
182_F194_Y0.6840.89
186_Y190_Y0.6810.89
384_K387_P0.6810.89
244_K402_P0.6800.89
404_Y530_L0.6790.89
424_S427_K0.6770.89
166_N169_Y0.6770.89
259_I269_T0.6760.89
423_A431_G0.6760.89
186_Y189_K0.6760.89
303_T523_E0.6740.89
378_V383_L0.6730.89
538_S541_Y0.6730.89
43_L55_F0.6730.89
37_G42_I0.6730.89
56_L59_A0.6730.89
160_I451_Q0.6730.89
70_I74_I0.6720.89
188_V193_L0.6720.89
284_Y506_M0.6710.88
122_D125_Y0.6710.88
532_H550_S0.6700.88
340_S363_D0.6690.88
111_G115_F0.6680.88
313_E317_F0.6680.88
133_I136_L0.6670.88
487_I491_E0.6670.88
12_F18_L0.6660.88
332_L404_Y0.6640.88
235_A238_F0.6640.88
12_F19_F0.6630.88
329_P404_Y0.6620.88
244_K338_Y0.6620.88
241_A466_V0.6590.88
138_W142_L0.6590.88
84_A96_L0.6570.87
248_K406_H0.6570.87
274_K457_K0.6560.87
345_G381_M0.6560.87
166_N170_A0.6550.87
47_N51_S0.6550.87
101_I276_A0.6550.87
18_L24_Y0.6540.87
268_V273_N0.6530.87
170_A174_R0.6510.87
258_L435_V0.6500.87
10_S20_W0.6480.87
409_T452_F0.6480.87
14_L24_Y0.6480.87
389_F448_A0.6460.87
262_K265_G0.6450.86
230_Y233_P0.6440.86
423_A426_K0.6420.86
285_F547_D0.6410.86
136_L139_R0.6400.86
215_S222_V0.6400.86
340_S404_Y0.6380.86
474_N477_S0.6370.86
247_I396_L0.6370.86
183_D195_N0.6370.86
10_S13_V0.6350.86
167_L170_A0.6350.86
109_N112_D0.6350.86
16_V80_F0.6340.85
388_F448_A0.6340.85
176_Q181_T0.6330.85
252_E409_T0.6330.85
379_I384_K0.6300.85
30_E36_K0.6290.85
464_N468_M0.6280.85
12_F28_K0.6270.85
179_T183_D0.6270.85
12_F27_Y0.6260.85
245_N466_V0.6260.85
13_V18_L0.6260.85
161_A168_H0.6260.85
25_L30_E0.6250.85
250_H408_I0.6240.85
295_G298_S0.6220.84
224_N228_S0.6220.84
255_Q477_S0.6220.84
338_Y534_E0.6200.84
85_N412_N0.6200.84
261_Y268_V0.6190.84
131_I135_V0.6190.84
211_R214_A0.6170.84
34_G40_Q0.6160.84
160_I163_F0.6160.84
445_L449_L0.6150.84
516_V521_G0.6150.84
182_F188_V0.6140.84
195_N202_V0.6120.83
152_A160_I0.6110.83
185_N188_V0.6100.83
71_M74_I0.6100.83
150_R154_L0.6100.83
426_K431_G0.6090.83
453_F462_Y0.6080.83
71_M75_D0.6070.83
396_L456_L0.6060.83
38_T44_L0.6060.83
186_Y193_L0.6060.83
51_S58_L0.6050.83
428_A431_G0.6050.83
438_Y475_G0.6050.83
39_T43_L0.6040.83
264_N439_F0.6030.83
102_K106_N0.6030.83
44_L48_P0.6010.82
217_D226_T0.6010.82
362_Y365_F0.6010.82
210_Q214_A0.6000.82
285_F289_F0.6000.82
100_N103_Q0.5990.82
376_E387_P0.5990.82
49_F52_A0.5990.82
214_A222_V0.5980.82
62_A66_K0.5980.82
139_R143_K0.5970.82
356_I360_I0.5950.82
48_P57_G0.5950.82
47_N63_K0.5950.82
268_V439_F0.5950.82
33_L37_G0.5940.82
18_L21_A0.5940.82
275_L279_G0.5940.82
189_K195_N0.5930.81
160_I167_L0.5930.81
117_I121_H0.5930.81
519_T548_L0.5930.81
32_N35_V0.5900.81
111_G114_I0.5880.81
316_A319_T0.5880.81
273_N276_A0.5880.81
234_N237_Y0.5870.81
219_L225_Y0.5870.81
422_D426_K0.5870.81
194_Y197_T0.5860.81
288_F526_V0.5850.81
247_I456_L0.5830.80
394_P455_E0.5830.80
187_I195_N0.5830.80
298_S330_A0.5810.80
36_K43_L0.5810.80
305_D404_Y0.5810.80
396_L452_F0.5800.80
15_A27_Y0.5800.80
425_L440_Q0.5800.80
347_Y368_A0.5790.80
45_I58_L0.5790.80
355_Q358_K0.5760.80
432_D435_V0.5760.80
25_L28_K0.5750.79
286_D517_N0.5750.79
182_F186_Y0.5740.79
185_N189_K0.5730.79
147_M164_F0.5720.79
192_G301_E0.5720.79
316_A321_G0.5720.79
445_L523_E0.5720.79
197_T202_V0.5690.79
290_H474_N0.5690.79
311_L314_G0.5670.79
388_F392_S0.5670.79
416_F475_G0.5670.79
303_T409_T0.5660.78
166_N171_E0.5660.78
469_I508_R0.5650.78
44_L53_V0.5640.78
116_S120_G0.5640.78
11_F14_L0.5640.78
248_K470_Y0.5630.78
72_L133_I0.5630.78
213_Y217_D0.5630.78
216_S220_T0.5630.78
45_I55_F0.5630.78
212_A222_V0.5620.78
161_A166_N0.5620.78
495_Y499_Q0.5620.78
390_T393_I0.5600.78
14_L17_I0.5590.78
409_T445_L0.5590.78
423_A427_K0.5590.78
301_E353_R0.5590.78
244_K511_G0.5580.77
88_F92_F0.5570.77
184_R200_D0.5570.77
246_I530_L0.5560.77
326_Q335_K0.5560.77
290_H294_Q0.5550.77
124_F128_D0.5550.77
341_A366_F0.5550.77
72_L75_D0.5540.77
505_L548_L0.5540.77
444_Y447_E0.5540.77
340_S408_I0.5530.77
31_F36_K0.5520.77
339_T530_L0.5520.77
449_L467_I0.5520.77
433_N436_D0.5520.77
81_V84_A0.5520.77
38_T59_A0.5520.77
302_L306_N0.5520.77
199_Y202_V0.5510.77
158_S165_I0.5500.76
252_E385_D0.5500.76
411_T444_Y0.5490.76
232_K236_E0.5490.76
10_S18_L0.5480.76
345_G383_L0.5480.76
164_F167_L0.5470.76
11_F18_L0.5470.76
544_F547_D0.5460.76
198_I205_A0.5460.76
309_F544_F0.5440.76
191_L194_Y0.5440.76
16_V23_T0.5440.76
225_Y228_S0.5420.75
271_F446_D0.5400.75
353_R408_I0.5400.75
45_I53_V0.5400.75
434_T437_S0.5390.75
147_M150_R0.5390.75
305_D406_H0.5390.75
17_I27_Y0.5390.75
154_L157_L0.5380.75
425_L429_T0.5380.75
53_V60_L0.5380.75
516_V519_T0.5380.75
43_L48_P0.5370.75
96_L259_I0.5370.75
315_S320_K0.5360.75
159_G163_F0.5350.74
291_Q294_Q0.5350.74
373_M376_E0.5330.74
55_F63_K0.5330.74
252_E412_N0.5330.74
187_I193_L0.5330.74
150_R220_T0.5330.74
47_N56_L0.5320.74
438_Y474_N0.5310.74
379_I382_G0.5310.74
147_M155_V0.5310.74
33_L36_K0.5300.74
19_F59_A0.5290.74
153_S160_I0.5290.74
210_Q213_Y0.5290.74
348_K370_T0.5290.74
46_F57_G0.5280.74
345_G388_F0.5270.73
158_S163_F0.5260.73
210_Q215_S0.5260.73
88_F94_D0.5250.73
270_P273_N0.5250.73
196_Y203_Q0.5250.73
141_E144_E0.5240.73
113_G117_I0.5230.73
507_I529_T0.5220.73
183_D191_L0.5220.73
45_I59_A0.5210.73
153_S161_A0.5210.73
127_L138_W0.5210.73
428_A437_S0.5210.73
169_Y172_K0.5200.72
161_A169_Y0.5200.72
253_S472_D0.5200.72
197_T203_Q0.5200.72
217_D223_E0.5190.72
367_D371_Y0.5190.72
155_V165_I0.5180.72
310_G313_E0.5170.72
47_N60_L0.5170.72
214_A221_S0.5170.72
80_F158_S0.5170.72
192_G197_T0.5160.72
199_Y203_Q0.5160.72
379_I410_L0.5150.72
15_A23_T0.5150.72
269_T446_D0.5120.71
11_F17_I0.5110.71
47_N52_A0.5110.71
10_S26_S0.5100.71
154_L159_G0.5100.71
196_Y204_T0.5090.71
192_G196_Y0.5090.71
158_S168_H0.5090.71
220_T224_N0.5070.71
22_K128_D0.5070.71
244_K465_S0.5070.71
111_G127_L0.5050.70
344_H410_L0.5040.70
271_F449_L0.5040.70
527_M543_N0.5030.70
160_I171_E0.5030.70
40_Q47_N0.5030.70
10_S15_A0.5020.70
183_D192_G0.5010.70
47_N57_G0.5000.69
291_Q300_A0.5000.69
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
2w8dA 1 0.651 100 0.438 Contact Map
2w5qA 1 0.6557 100 0.442 Contact Map
4uorA 3 0.6463 100 0.463 Contact Map
4uopA 2 0.6103 100 0.486 Contact Map
4upiA 2 0.5947 100 0.525 Contact Map
4uplA 2 0.5994 100 0.526 Contact Map
3lxqA 1 0.6009 100 0.528 Contact Map
3ed4A 3 0.6056 100 0.529 Contact Map
4uphA 2 0.5853 100 0.531 Contact Map
3b5qA 1 0.59 100 0.534 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.015 seconds.