LTAS1 - BACSU - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

LTAS1 - Lipoteichoic acid synthase 1

UniProt:	Q797B3	Sequences: MKKLFSYKLSFFVLAVILFWAKTYLSYKTEFNLGVKGTTQEILLIFNPFSSAVFFLGLALLAKGRKSAIIMLIIDFLMTFVLYANILFYRFFDDFLTFPNIKQSGNVGNMGDGIFSIMAGHDIFYFLDIIILIAVLIWRPELKEYKMKKRFASLVILSGIALFFINLHYAEKDRPQLLTRTFDRNYIVKYLGLYNYTIYDGVQTAQTETQRAYASSDDLTSVENYTTSHYAKPNAEYFGSAKGKNIIKIHLESFQSFLIDYKLNGEEVTPFLNKLAHGGEDVTYFDNFFHQTGQGKTSDAELTMDNSIFGLPEGSAFVTKGENTYQSLPAILDQKEGYTSAVLHGDYKSFWNRDQIYKHIGYDKFFDASTYDMSDENVINMGLKDKPFFTESIPKLESLKQPFYAHLITLTNHYPFNLDEKDASLKKATTGDNTVDSYFQTARYLDEALEQFFKELKEAGLYDNSVIMIYGDHNGISENHNRAMKEILGKEITDYQNAQNQRVPLMIRVPGKKGGVNHTYGGEIDVMPTLLHLEGIDSQKYINFGTDLFSKDHDDTVAFRNGDFVTPKYTSVDNIIYDTKTGEKLKANEETKNLKTRVNQQLSLSDSVLYKDLLRFHKLNDFKAVDPSDYHYGKEKEIK	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	639 (529)
Sequences:	4182 (3441)
Seq/√Len:	149.6

ECOLI - YEJM EPTC YHBX EPTA EPTB OPGE YIDJ
BACSU - LTAS1 LTAS2 YQGS YVGJ

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
286_D	518_H	6.546	1.00
271_F	450_E	5.784	1.00
333_D	363_D	5.627	1.00
532_H	547_D	4.399	1.00
397_E	459_A	4.293	1.00
271_F	274_K	3.968	1.00
249_I	469_I	3.908	1.00
521_G	548_L	3.606	1.00
20_W	23_T	3.491	1.00
247_I	467_I	3.456	1.00
246_I	534_E	3.333	1.00
278_G	457_K	3.317	1.00
339_T	401_Q	3.137	1.00
244_K	464_N	3.078	1.00
246_I	332_L	3.027	1.00
393_I	455_E	3.001	1.00
251_L	254_F	2.991	1.00
288_F	521_G	2.960	1.00
454_K	457_K	2.925	1.00
260_D	269_T	2.913	1.00
450_E	454_K	2.900	1.00
245_N	465_S	2.784	1.00
457_K	462_Y	2.748	1.00
367_D	370_T	2.536	1.00
454_K	458_E	2.458	1.00
247_I	465_S	2.415	1.00
332_L	534_E	2.375	1.00
462_Y	508_R	2.346	1.00
451_Q	454_K	2.335	1.00
245_N	403_F	2.287	1.00
267_E	273_N	2.250	1.00
466_V	507_I	2.165	1.00
135_V	139_R	2.146	1.00
23_T	26_S	2.114	1.00
23_T	27_Y	2.105	1.00
315_S	318_V	2.101	1.00
509_V	512_K	2.094	1.00
130_I	134_A	2.073	1.00
468_M	507_I	2.036	1.00
85_N	95_F	1.970	1.00
248_K	404_Y	1.963	1.00
453_F	467_I	1.960	1.00
456_L	467_I	1.954	1.00
249_I	449_L	1.950	1.00
22_K	27_Y	1.949	1.00
18_L	22_K	1.932	1.00
505_L	526_V	1.931	1.00
262_K	284_Y	1.925	1.00
395_K	398_S	1.924	1.00
393_I	459_A	1.918	1.00
352_N	355_Q	1.878	1.00
420_E	423_A	1.876	1.00
389_F	409_T	1.870	1.00
269_T	273_N	1.833	1.00
250_H	301_E	1.829	1.00
288_F	505_L	1.818	1.00
161_A	165_I	1.805	1.00
274_K	278_G	1.791	1.00
16_V	20_W	1.769	1.00
17_I	23_T	1.762	1.00
22_K	26_S	1.761	1.00
242_K	464_N	1.758	1.00
391_E	394_P	1.754	1.00
37_G	41_E	1.752	1.00
412_N	442_A	1.751	1.00
419_D	444_Y	1.740	1.00
23_T	28_K	1.736	1.00
470_Y	523_E	1.722	1.00
353_R	357_Y	1.708	1.00
286_D	516_V	1.706	1.00
16_V	22_K	1.678	1.00
413_H	472_D	1.669	1.00
386_K	451_Q	1.659	1.00
462_Y	467_I	1.654	1.00
22_K	25_L	1.654	1.00
431_G	436_D	1.652	1.00
471_G	503_V	1.649	1.00
455_E	458_E	1.639	1.00
218_D	221_S	1.636	1.00
297_T	408_I	1.627	1.00
109_N	113_G	1.616	1.00
45_I	48_P	1.609	1.00
351_W	354_D	1.592	1.00
274_K	450_E	1.591	1.00
343_L	395_K	1.590	1.00
529_T	549_F	1.585	1.00
452_F	467_I	1.581	1.00
272_L	449_L	1.575	1.00
41_E	45_I	1.574	1.00
258_L	442_A	1.572	1.00
341_A	405_A	1.570	1.00
248_K	468_M	1.567	1.00
22_K	28_K	1.560	1.00
389_F	393_I	1.558	1.00
447_E	451_Q	1.555	1.00
165_I	169_Y	1.551	1.00
312_P	316_A	1.550	1.00
455_E	459_A	1.544	1.00
251_L	445_L	1.541	1.00
260_D	273_N	1.535	1.00
354_D	358_K	1.527	1.00
307_S	528_P	1.522	1.00
271_F	453_F	1.521	1.00
352_N	357_Y	1.499	1.00
34_G	38_T	1.497	1.00
312_P	315_S	1.495	1.00
351_W	356_I	1.485	1.00
254_F	445_L	1.484	1.00
275_L	449_L	1.478	1.00
14_L	22_K	1.466	1.00
395_K	399_L	1.463	1.00
45_I	51_S	1.460	1.00
17_I	20_W	1.458	1.00
389_F	452_F	1.445	1.00
304_M	470_Y	1.445	1.00
347_Y	350_F	1.441	1.00
260_D	277_H	1.439	1.00
251_L	449_L	1.438	1.00
386_K	444_Y	1.438	1.00
274_K	277_H	1.436	1.00
331_I	531_L	1.435	1.00
403_F	461_L	1.428	1.00
466_V	509_V	1.427	1.00
314_G	318_V	1.427	1.00
269_T	272_L	1.417	1.00
45_I	56_L	1.414	1.00
254_F	258_L	1.410	1.00
351_W	357_Y	1.407	1.00
313_E	316_A	1.394	1.00
342_V	408_I	1.380	1.00
246_I	466_V	1.375	1.00
451_Q	455_E	1.372	1.00
470_Y	526_V	1.370	1.00
20_W	26_S	1.369	1.00
20_W	27_Y	1.368	1.00
392_S	407_L	1.365	1.00
26_S	29_T	1.356	1.00
190_Y	193_L	1.356	1.00
110_M	113_G	1.354	1.00
20_W	29_T	1.351	1.00
219_L	223_E	1.347	1.00
38_T	41_E	1.346	1.00
215_S	218_D	1.345	1.00
23_T	29_T	1.344	1.00
22_K	29_T	1.337	1.00
306_N	327_S	1.335	1.00
162_L	166_N	1.334	1.00
260_D	267_E	1.333	1.00
353_R	356_I	1.327	1.00
283_T	549_F	1.327	1.00
517_N	521_G	1.322	1.00
251_L	469_I	1.321	1.00
412_N	441_T	1.317	1.00
492_I	495_Y	1.316	1.00
254_F	442_A	1.307	1.00
164_F	168_H	1.307	1.00
245_N	463_D	1.306	1.00
256_S	502_R	1.305	1.00
38_T	43_L	1.303	1.00
338_Y	402_P	1.301	1.00
134_A	138_W	1.280	1.00
468_M	530_L	1.277	1.00
244_K	466_V	1.277	1.00
48_P	59_A	1.276	1.00
219_L	222_V	1.275	1.00
13_V	17_I	1.267	1.00
304_M	526_V	1.265	1.00
252_E	472_D	1.264	1.00
463_D	511_G	1.257	1.00
352_N	356_I	1.253	1.00
34_G	48_P	1.242	1.00
314_G	317_F	1.241	1.00
196_Y	200_D	1.241	1.00
443_R	447_E	1.240	1.00
271_F	454_K	1.240	1.00
202_V	206_Q	1.237	1.00
449_L	469_I	1.232	1.00
393_I	397_E	1.225	1.00
423_A	428_A	1.223	1.00
189_K	194_Y	1.222	1.00
397_E	455_E	1.222	1.00
388_F	407_L	1.220	1.00
279_G	508_R	1.218	1.00
329_P	362_Y	1.206	1.00
394_P	398_S	1.202	1.00
392_S	396_L	1.200	1.00
328_L	530_L	1.200	1.00
247_I	403_F	1.197	1.00
246_I	404_Y	1.193	1.00
531_L	536_I	1.181	1.00
54_F	58_L	1.177	1.00
275_L	453_F	1.175	1.00
390_T	451_Q	1.173	1.00
53_V	57_G	1.172	1.00
15_A	22_K	1.172	1.00
231_A	235_A	1.169	1.00
283_T	515_G	1.167	1.00
343_L	405_A	1.165	1.00
453_F	469_I	1.160	1.00
254_F	272_L	1.160	1.00
154_L	161_A	1.160	1.00
24_Y	27_Y	1.156	1.00
19_F	23_T	1.154	1.00
342_V	357_Y	1.149	1.00
160_I	164_F	1.147	1.00
275_L	506_M	1.147	1.00
24_Y	28_K	1.143	1.00
237_Y	549_F	1.143	1.00
31_F	34_G	1.141	1.00
254_F	269_T	1.141	1.00
276_A	284_Y	1.139	1.00
250_H	470_Y	1.138	1.00
419_D	422_D	1.135	1.00
391_E	395_K	1.134	1.00
448_A	451_Q	1.132	1.00
148_K	152_A	1.132	1.00
246_I	468_M	1.131	1.00
255_Q	474_N	1.131	1.00
180_R	183_D	1.130	0.99
289_F	502_R	1.129	0.99
90_R	122_D	1.125	0.99
220_T	223_E	1.121	0.99
348_K	367_D	1.121	0.99
16_V	26_S	1.119	0.99
196_Y	201_G	1.116	0.99
123_I	127_L	1.115	0.99
146_K	149_K	1.112	0.99
129_I	133_I	1.102	0.99
424_S	443_R	1.102	0.99
266_E	439_F	1.097	0.99
153_S	157_L	1.094	0.99
350_F	353_R	1.093	0.99
453_F	457_K	1.092	0.99
249_I	389_F	1.091	0.99
332_L	531_L	1.089	0.99
30_E	34_G	1.088	0.99
250_H	304_M	1.083	0.99
223_E	227_T	1.082	0.99
316_A	320_K	1.080	0.99
15_A	19_F	1.074	0.99
336_E	536_I	1.062	0.99
18_L	29_T	1.062	0.99
20_W	24_Y	1.060	0.99
198_I	201_G	1.059	0.99
65_R	68_A	1.057	0.99
287_N	502_R	1.055	0.99
46_F	50_S	1.055	0.99
17_I	22_K	1.053	0.99
349_S	354_D	1.053	0.99
248_K	304_M	1.052	0.99
121_H	125_Y	1.052	0.99
466_V	530_L	1.051	0.99
258_L	439_F	1.043	0.99
183_D	189_K	1.041	0.99
456_L	460_G	1.040	0.99
422_D	447_E	1.040	0.99
157_L	161_A	1.037	0.99
447_E	450_E	1.035	0.99
19_F	22_K	1.035	0.99
50_S	56_L	1.032	0.99
339_T	399_L	1.031	0.99
161_A	164_F	1.030	0.99
283_T	517_N	1.030	0.99
248_K	526_V	1.025	0.99
498_A	501_Q	1.025	0.99
257_F	499_Q	1.022	0.99
218_D	223_E	1.022	0.99
217_D	220_T	1.021	0.99
396_L	405_A	1.015	0.99
14_L	26_S	1.010	0.99
528_P	545_G	1.010	0.99
147_M	151_F	1.007	0.99
315_S	319_T	1.006	0.99
19_F	26_S	1.004	0.99
252_E	413_H	1.002	0.99
525_D	545_G	1.002	0.99
385_D	389_F	0.994	0.99
14_L	18_L	0.992	0.99
214_A	218_D	0.990	0.99
213_Y	218_D	0.990	0.99
250_H	406_H	0.989	0.99
133_I	137_I	0.989	0.99
287_N	520_Y	0.988	0.99
547_D	550_S	0.988	0.99
140_P	144_E	0.979	0.99
191_L	195_N	0.974	0.99
40_Q	44_L	0.971	0.98
123_I	126_F	0.968	0.98
56_L	60_L	0.966	0.98
16_V	27_Y	0.965	0.98
339_T	364_K	0.963	0.98
341_A	403_F	0.958	0.98
362_Y	406_H	0.958	0.98
18_L	28_K	0.954	0.98
348_K	354_D	0.954	0.98
124_F	127_L	0.951	0.98
254_F	469_I	0.949	0.98
200_D	203_Q	0.945	0.98
331_I	335_K	0.945	0.98
456_L	461_L	0.939	0.98
291_Q	522_G	0.938	0.98
341_A	399_L	0.933	0.98
57_G	60_L	0.931	0.98
221_S	224_N	0.931	0.98
399_L	403_F	0.930	0.98
48_P	52_A	0.928	0.98
346_D	350_F	0.926	0.98
120_G	124_F	0.922	0.98
21_A	28_K	0.922	0.98
337_G	402_P	0.920	0.98
426_K	430_T	0.919	0.98
13_V	28_K	0.919	0.98
297_T	413_H	0.915	0.98
295_G	299_D	0.914	0.98
445_L	448_A	0.914	0.98
333_D	340_S	0.913	0.98
284_Y	516_V	0.912	0.98
18_L	26_S	0.912	0.98
341_A	364_K	0.912	0.98
344_H	353_R	0.911	0.98
18_L	23_T	0.911	0.98
254_F	259_I	0.910	0.98
41_E	44_L	0.909	0.98
425_L	443_R	0.908	0.98
270_P	446_D	0.907	0.98
146_K	151_F	0.907	0.98
413_H	473_H	0.904	0.98
357_Y	365_F	0.904	0.98
34_G	41_E	0.903	0.98
16_V	19_F	0.902	0.98
469_I	506_M	0.902	0.98
14_L	19_F	0.901	0.98
222_V	225_Y	0.899	0.97
214_A	217_D	0.897	0.97
38_T	42_I	0.896	0.97
296_K	299_D	0.896	0.97
131_I	134_A	0.894	0.97
276_A	506_M	0.894	0.97
412_N	445_L	0.891	0.97
328_L	531_L	0.890	0.97
197_T	200_D	0.889	0.97
147_M	152_A	0.889	0.97
243_G	336_E	0.889	0.97
387_P	390_T	0.883	0.97
13_V	22_K	0.883	0.97
498_A	502_R	0.880	0.97
158_S	161_A	0.880	0.97
176_Q	180_R	0.879	0.97
41_E	48_P	0.878	0.97
232_K	235_A	0.877	0.97
351_W	355_Q	0.874	0.97
527_M	531_L	0.874	0.97
136_L	140_P	0.872	0.97
386_K	447_E	0.871	0.97
15_A	18_L	0.871	0.97
216_S	219_L	0.871	0.97
339_T	363_D	0.866	0.97
158_S	162_L	0.862	0.97
418_L	440_Q	0.862	0.97
153_S	168_H	0.861	0.97
382_G	410_L	0.859	0.97
476_I	500_N	0.855	0.97
30_E	33_L	0.854	0.97
192_G	195_N	0.853	0.97
245_N	402_P	0.853	0.97
350_F	357_Y	0.852	0.97
394_P	397_E	0.846	0.96
21_A	25_L	0.845	0.96
418_L	423_A	0.844	0.96
317_F	320_K	0.842	0.96
251_L	389_F	0.842	0.96
285_F	505_L	0.842	0.96
13_V	16_V	0.837	0.96
389_F	445_L	0.835	0.96
49_F	53_V	0.831	0.96
256_S	284_Y	0.830	0.96
109_N	114_I	0.828	0.96
11_F	27_Y	0.825	0.96
425_L	428_A	0.822	0.96
310_G	314_G	0.822	0.96
401_Q	464_N	0.820	0.96
231_A	234_N	0.820	0.96
69_I	73_I	0.818	0.96
168_H	171_E	0.818	0.96
417_N	437_S	0.816	0.96
426_K	429_T	0.816	0.96
341_A	395_K	0.815	0.96
44_L	47_N	0.814	0.95
371_Y	391_E	0.812	0.95
182_F	185_N	0.811	0.95
463_D	510_P	0.810	0.95
165_I	171_E	0.809	0.95
213_Y	216_S	0.809	0.95
436_D	440_Q	0.809	0.95
243_G	402_P	0.808	0.95
354_D	357_Y	0.804	0.95
153_S	156_I	0.801	0.95
248_K	328_L	0.800	0.95
448_A	452_F	0.799	0.95
66_K	69_I	0.797	0.95
38_T	48_P	0.797	0.95
387_P	391_E	0.795	0.95
488_L	491_E	0.791	0.95
134_A	137_I	0.790	0.95
12_F	22_K	0.789	0.95
122_D	126_F	0.789	0.95
270_P	275_L	0.788	0.95
423_A	430_T	0.788	0.95
222_V	226_T	0.783	0.94
45_I	50_S	0.783	0.94
449_L	453_F	0.782	0.94
411_T	441_T	0.780	0.94
272_L	284_Y	0.776	0.94
518_H	521_G	0.773	0.94
45_I	54_F	0.771	0.94
154_L	158_S	0.771	0.94
10_S	16_V	0.770	0.94
149_K	152_A	0.770	0.94
343_L	366_F	0.769	0.94
10_S	14_L	0.766	0.94
267_E	443_R	0.766	0.94
114_I	117_I	0.765	0.94
42_I	47_N	0.765	0.94
184_R	187_I	0.764	0.94
11_F	15_A	0.763	0.94
480_H	499_Q	0.763	0.94
24_Y	29_T	0.763	0.94
165_I	168_H	0.763	0.94
146_K	152_A	0.760	0.94
51_S	54_F	0.759	0.93
76_F	80_F	0.758	0.93
180_R	184_R	0.756	0.93
190_Y	194_Y	0.756	0.93
37_G	40_Q	0.751	0.93
10_S	22_K	0.751	0.93
51_S	61_L	0.749	0.93
267_E	270_P	0.748	0.93
306_N	356_I	0.746	0.93
32_N	38_T	0.745	0.93
43_L	51_S	0.743	0.93
272_L	506_M	0.743	0.93
223_E	226_T	0.743	0.93
297_T	300_A	0.741	0.93
148_K	151_F	0.739	0.93
392_S	405_A	0.737	0.92
34_G	37_G	0.736	0.92
216_S	223_E	0.735	0.92
17_I	24_Y	0.735	0.92
197_T	201_G	0.733	0.92
178_L	183_D	0.731	0.92
18_L	25_L	0.731	0.92
328_L	527_M	0.731	0.92
438_Y	442_A	0.730	0.92
177_L	180_R	0.729	0.92
115_F	118_M	0.729	0.92
132_L	135_V	0.728	0.92
503_V	523_E	0.726	0.92
213_Y	219_L	0.721	0.92
366_F	370_T	0.718	0.91
167_L	171_E	0.717	0.91
218_D	222_V	0.716	0.91
497_N	500_N	0.714	0.91
50_S	54_F	0.712	0.91
126_F	129_I	0.712	0.91
184_R	193_L	0.711	0.91
390_T	455_E	0.710	0.91
260_D	263_L	0.710	0.91
275_L	469_I	0.708	0.91
13_V	23_T	0.707	0.91
253_S	471_G	0.707	0.91
130_I	133_I	0.704	0.91
247_I	452_F	0.702	0.91
255_Q	438_Y	0.702	0.91
25_L	29_T	0.701	0.90
17_I	26_S	0.701	0.90
132_L	136_L	0.700	0.90
214_A	219_L	0.699	0.90
45_I	49_F	0.697	0.90
48_P	51_S	0.696	0.90
297_T	301_E	0.696	0.90
156_I	159_G	0.695	0.90
85_N	197_T	0.695	0.90
42_I	51_S	0.695	0.90
276_A	286_D	0.692	0.90
254_F	412_N	0.692	0.90
103_Q	106_N	0.690	0.90
154_L	165_I	0.690	0.90
51_S	59_A	0.689	0.90
21_A	26_S	0.688	0.90
85_N	96_L	0.687	0.90
297_T	473_H	0.686	0.89
499_Q	502_R	0.685	0.89
279_G	284_Y	0.684	0.89
20_W	28_K	0.684	0.89
195_N	198_I	0.684	0.89
182_F	194_Y	0.684	0.89
186_Y	190_Y	0.681	0.89
384_K	387_P	0.681	0.89
244_K	402_P	0.680	0.89
404_Y	530_L	0.679	0.89
424_S	427_K	0.677	0.89
166_N	169_Y	0.677	0.89
259_I	269_T	0.676	0.89
423_A	431_G	0.676	0.89
186_Y	189_K	0.676	0.89
303_T	523_E	0.674	0.89
378_V	383_L	0.673	0.89
538_S	541_Y	0.673	0.89
43_L	55_F	0.673	0.89
37_G	42_I	0.673	0.89
56_L	59_A	0.673	0.89
160_I	451_Q	0.673	0.89
70_I	74_I	0.672	0.89
188_V	193_L	0.672	0.89
284_Y	506_M	0.671	0.88
122_D	125_Y	0.671	0.88
532_H	550_S	0.670	0.88
340_S	363_D	0.669	0.88
111_G	115_F	0.668	0.88
313_E	317_F	0.668	0.88
133_I	136_L	0.667	0.88
487_I	491_E	0.667	0.88
12_F	18_L	0.666	0.88
332_L	404_Y	0.664	0.88
235_A	238_F	0.664	0.88
12_F	19_F	0.663	0.88
329_P	404_Y	0.662	0.88
244_K	338_Y	0.662	0.88
241_A	466_V	0.659	0.88
138_W	142_L	0.659	0.88
84_A	96_L	0.657	0.87
248_K	406_H	0.657	0.87
274_K	457_K	0.656	0.87
345_G	381_M	0.656	0.87
166_N	170_A	0.655	0.87
47_N	51_S	0.655	0.87
101_I	276_A	0.655	0.87
18_L	24_Y	0.654	0.87
268_V	273_N	0.653	0.87
170_A	174_R	0.651	0.87
258_L	435_V	0.650	0.87
10_S	20_W	0.648	0.87
409_T	452_F	0.648	0.87
14_L	24_Y	0.648	0.87
389_F	448_A	0.646	0.87
262_K	265_G	0.645	0.86
230_Y	233_P	0.644	0.86
423_A	426_K	0.642	0.86
285_F	547_D	0.641	0.86
136_L	139_R	0.640	0.86
215_S	222_V	0.640	0.86
340_S	404_Y	0.638	0.86
474_N	477_S	0.637	0.86
247_I	396_L	0.637	0.86
183_D	195_N	0.637	0.86
10_S	13_V	0.635	0.86
167_L	170_A	0.635	0.86
109_N	112_D	0.635	0.86
16_V	80_F	0.634	0.85
388_F	448_A	0.634	0.85
176_Q	181_T	0.633	0.85
252_E	409_T	0.633	0.85
379_I	384_K	0.630	0.85
30_E	36_K	0.629	0.85
464_N	468_M	0.628	0.85
12_F	28_K	0.627	0.85
179_T	183_D	0.627	0.85
12_F	27_Y	0.626	0.85
245_N	466_V	0.626	0.85
13_V	18_L	0.626	0.85
161_A	168_H	0.626	0.85
25_L	30_E	0.625	0.85
250_H	408_I	0.624	0.85
295_G	298_S	0.622	0.84
224_N	228_S	0.622	0.84
255_Q	477_S	0.622	0.84
338_Y	534_E	0.620	0.84
85_N	412_N	0.620	0.84
261_Y	268_V	0.619	0.84
131_I	135_V	0.619	0.84
211_R	214_A	0.617	0.84
34_G	40_Q	0.616	0.84
160_I	163_F	0.616	0.84
445_L	449_L	0.615	0.84
516_V	521_G	0.615	0.84
182_F	188_V	0.614	0.84
195_N	202_V	0.612	0.83
152_A	160_I	0.611	0.83
185_N	188_V	0.610	0.83
71_M	74_I	0.610	0.83
150_R	154_L	0.610	0.83
426_K	431_G	0.609	0.83
453_F	462_Y	0.608	0.83
71_M	75_D	0.607	0.83
396_L	456_L	0.606	0.83
38_T	44_L	0.606	0.83
186_Y	193_L	0.606	0.83
51_S	58_L	0.605	0.83
428_A	431_G	0.605	0.83
438_Y	475_G	0.605	0.83
39_T	43_L	0.604	0.83
264_N	439_F	0.603	0.83
102_K	106_N	0.603	0.83
44_L	48_P	0.601	0.82
217_D	226_T	0.601	0.82
362_Y	365_F	0.601	0.82
210_Q	214_A	0.600	0.82
285_F	289_F	0.600	0.82
100_N	103_Q	0.599	0.82
376_E	387_P	0.599	0.82
49_F	52_A	0.599	0.82
214_A	222_V	0.598	0.82
62_A	66_K	0.598	0.82
139_R	143_K	0.597	0.82
356_I	360_I	0.595	0.82
48_P	57_G	0.595	0.82
47_N	63_K	0.595	0.82
268_V	439_F	0.595	0.82
33_L	37_G	0.594	0.82
18_L	21_A	0.594	0.82
275_L	279_G	0.594	0.82
189_K	195_N	0.593	0.81
160_I	167_L	0.593	0.81
117_I	121_H	0.593	0.81
519_T	548_L	0.593	0.81
32_N	35_V	0.590	0.81
111_G	114_I	0.588	0.81
316_A	319_T	0.588	0.81
273_N	276_A	0.588	0.81
234_N	237_Y	0.587	0.81
219_L	225_Y	0.587	0.81
422_D	426_K	0.587	0.81
194_Y	197_T	0.586	0.81
288_F	526_V	0.585	0.81
247_I	456_L	0.583	0.80
394_P	455_E	0.583	0.80
187_I	195_N	0.583	0.80
298_S	330_A	0.581	0.80
36_K	43_L	0.581	0.80
305_D	404_Y	0.581	0.80
396_L	452_F	0.580	0.80
15_A	27_Y	0.580	0.80
425_L	440_Q	0.580	0.80
347_Y	368_A	0.579	0.80
45_I	58_L	0.579	0.80
355_Q	358_K	0.576	0.80
432_D	435_V	0.576	0.80
25_L	28_K	0.575	0.79
286_D	517_N	0.575	0.79
182_F	186_Y	0.574	0.79
185_N	189_K	0.573	0.79
147_M	164_F	0.572	0.79
192_G	301_E	0.572	0.79
316_A	321_G	0.572	0.79
445_L	523_E	0.572	0.79
197_T	202_V	0.569	0.79
290_H	474_N	0.569	0.79
311_L	314_G	0.567	0.79
388_F	392_S	0.567	0.79
416_F	475_G	0.567	0.79
303_T	409_T	0.566	0.78
166_N	171_E	0.566	0.78
469_I	508_R	0.565	0.78
44_L	53_V	0.564	0.78
116_S	120_G	0.564	0.78
11_F	14_L	0.564	0.78
248_K	470_Y	0.563	0.78
72_L	133_I	0.563	0.78
213_Y	217_D	0.563	0.78
216_S	220_T	0.563	0.78
45_I	55_F	0.563	0.78
212_A	222_V	0.562	0.78
161_A	166_N	0.562	0.78
495_Y	499_Q	0.562	0.78
390_T	393_I	0.560	0.78
14_L	17_I	0.559	0.78
409_T	445_L	0.559	0.78
423_A	427_K	0.559	0.78
301_E	353_R	0.559	0.78
244_K	511_G	0.558	0.77
88_F	92_F	0.557	0.77
184_R	200_D	0.557	0.77
246_I	530_L	0.556	0.77
326_Q	335_K	0.556	0.77
290_H	294_Q	0.555	0.77
124_F	128_D	0.555	0.77
341_A	366_F	0.555	0.77
72_L	75_D	0.554	0.77
505_L	548_L	0.554	0.77
444_Y	447_E	0.554	0.77
340_S	408_I	0.553	0.77
31_F	36_K	0.552	0.77
339_T	530_L	0.552	0.77
449_L	467_I	0.552	0.77
433_N	436_D	0.552	0.77
81_V	84_A	0.552	0.77
38_T	59_A	0.552	0.77
302_L	306_N	0.552	0.77
199_Y	202_V	0.551	0.77
158_S	165_I	0.550	0.76
252_E	385_D	0.550	0.76
411_T	444_Y	0.549	0.76
232_K	236_E	0.549	0.76
10_S	18_L	0.548	0.76
345_G	383_L	0.548	0.76
164_F	167_L	0.547	0.76
11_F	18_L	0.547	0.76
544_F	547_D	0.546	0.76
198_I	205_A	0.546	0.76
309_F	544_F	0.544	0.76
191_L	194_Y	0.544	0.76
16_V	23_T	0.544	0.76
225_Y	228_S	0.542	0.75
271_F	446_D	0.540	0.75
353_R	408_I	0.540	0.75
45_I	53_V	0.540	0.75
434_T	437_S	0.539	0.75
147_M	150_R	0.539	0.75
305_D	406_H	0.539	0.75
17_I	27_Y	0.539	0.75
154_L	157_L	0.538	0.75
425_L	429_T	0.538	0.75
53_V	60_L	0.538	0.75
516_V	519_T	0.538	0.75
43_L	48_P	0.537	0.75
96_L	259_I	0.537	0.75
315_S	320_K	0.536	0.75
159_G	163_F	0.535	0.74
291_Q	294_Q	0.535	0.74
373_M	376_E	0.533	0.74
55_F	63_K	0.533	0.74
252_E	412_N	0.533	0.74
187_I	193_L	0.533	0.74
150_R	220_T	0.533	0.74
47_N	56_L	0.532	0.74
438_Y	474_N	0.531	0.74
379_I	382_G	0.531	0.74
147_M	155_V	0.531	0.74
33_L	36_K	0.530	0.74
19_F	59_A	0.529	0.74
153_S	160_I	0.529	0.74
210_Q	213_Y	0.529	0.74
348_K	370_T	0.529	0.74
46_F	57_G	0.528	0.74
345_G	388_F	0.527	0.73
158_S	163_F	0.526	0.73
210_Q	215_S	0.526	0.73
88_F	94_D	0.525	0.73
270_P	273_N	0.525	0.73
196_Y	203_Q	0.525	0.73
141_E	144_E	0.524	0.73
113_G	117_I	0.523	0.73
507_I	529_T	0.522	0.73
183_D	191_L	0.522	0.73
45_I	59_A	0.521	0.73
153_S	161_A	0.521	0.73
127_L	138_W	0.521	0.73
428_A	437_S	0.521	0.73
169_Y	172_K	0.520	0.72
161_A	169_Y	0.520	0.72
253_S	472_D	0.520	0.72
197_T	203_Q	0.520	0.72
217_D	223_E	0.519	0.72
367_D	371_Y	0.519	0.72
155_V	165_I	0.518	0.72
310_G	313_E	0.517	0.72
47_N	60_L	0.517	0.72
214_A	221_S	0.517	0.72
80_F	158_S	0.517	0.72
192_G	197_T	0.516	0.72
199_Y	203_Q	0.516	0.72
379_I	410_L	0.515	0.72
15_A	23_T	0.515	0.72
269_T	446_D	0.512	0.71
11_F	17_I	0.511	0.71
47_N	52_A	0.511	0.71
10_S	26_S	0.510	0.71
154_L	159_G	0.510	0.71
196_Y	204_T	0.509	0.71
192_G	196_Y	0.509	0.71
158_S	168_H	0.509	0.71
220_T	224_N	0.507	0.71
22_K	128_D	0.507	0.71
244_K	465_S	0.507	0.71
111_G	127_L	0.505	0.70
344_H	410_L	0.504	0.70
271_F	449_L	0.504	0.70
527_M	543_N	0.503	0.70
160_I	171_E	0.503	0.70
40_Q	47_N	0.503	0.70
10_S	15_A	0.502	0.70
183_D	192_G	0.501	0.70
47_N	57_G	0.500	0.69
291_Q	300_A	0.500	0.69

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2w8dA	1	0.651	100	0.438	Contact Map
2w5qA	1	0.6557	100	0.442	Contact Map
4uorA	3	0.6463	100	0.463	Contact Map
4uopA	2	0.6103	100	0.486	Contact Map
4upiA	2	0.5947	100	0.525	Contact Map
4uplA	2	0.5994	100	0.526	Contact Map
3lxqA	1	0.6009	100	0.528	Contact Map
3ed4A	3	0.6056	100	0.529	Contact Map
4uphA	2	0.5853	100	0.531	Contact Map
3b5qA	1	0.59	100	0.534	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0148 seconds.