YITY - BACSU - GREMLIN Contacts

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YITY - Uncharacterized FAD-linked oxidoreductase YitY

UniProt:	Q796P5	Sequences: MKKKLLAFALCTGAYAALFAYSVNSEQKTATSEMTDVSRLMPVKIKQTVKGQEEEMLIDTVKEANRKNIKISIAGAQHSMGGHTYYEDGIVLDMTGYNKILSLDQEKKTIRVQSGATWNDIQKYVNPYGLAVKVMQSQNIFTIGGSLSANAHGRDIRYGSLIDTVKSFRLLKADGMIITVTPKDDLFTAVIGGYGLFGVILDVTLELTDDELYVMKTEKMNYSTYSDYFSKHVKGNPDVRMHLARISTAKKGFLKDMYVTNYVLANHQDQLSSYSELKEDEYTGATKFALGLSRRYEWGRNWLWDTQQSYFLSQNGTEISRNNVMRSESKFLEYENNDNTDVLQEYFVPVKEYGSYIDDLRQTLSDEDLNLLNITIRYVQKNEKADLSYAKDDMFSLVLLINEGFSKEDQADTARIIRRMTDVAIKHGGSYYLPYMTYQTKAQMRQAYPKSEAFFQKKRTYDPDERFMNYFYQRYK	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	476 (422)
Sequences:	18626 (14438)
Seq/√Len:	702.8

ECOLI - GLCD YGCU YDIJ GLCE
BACSU - YITY GLCD YVDP YGAK
HALSA - Q9HMR2
SULSO - Q97U60 Q97Y18 Q7LX43 Q97U59 Q97ZB9 Q7LXI5

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
169_R	202_D	4.121	1.00
54_E	169_R	3.947	1.00
65_N	464_D	3.826	1.00
147_L	203_V	3.595	1.00
99_K	113_Q	3.454	1.00
166_K	206_E	3.316	1.00
68_N	464_D	3.085	1.00
104_D	107_K	3.064	1.00
111_R	204_T	3.035	1.00
98_N	120_D	3.026	1.00
111_R	202_D	2.996	1.00
169_R	179_T	2.983	1.00
124_Y	127_P	2.902	1.00
352_E	355_S	2.843	1.00
224_T	227_D	2.804	1.00
49_V	60_T	2.776	1.00
130_L	207_L	2.720	1.00
170_L	190_V	2.702	1.00
57_L	201_L	2.543	1.00
61_V	71_I	2.506	1.00
58_I	177_I	2.483	1.00
113_Q	202_D	2.467	1.00
167_S	179_T	2.449	1.00
172_K	176_M	2.419	1.00
116_A	121_I	2.368	1.00
52_Q	96_G	2.367	1.00
167_S	204_T	2.337	1.00
173_A	467_F	2.297	1.00
359_D	426_K	2.256	1.00
119_N	123_K	2.215	1.00
105_Q	128_Y	2.203	1.00
54_E	177_I	2.112	1.00
63_E	67_K	2.111	1.00
100_I	116_A	2.082	1.00
55_E	58_I	2.060	1.00
226_S	358_D	2.053	1.00
172_K	178_I	2.023	1.00
117_T	120_D	2.017	1.00
169_R	177_I	2.016	1.00
126_N	210_D	2.004	1.00
110_I	121_I	1.999	1.00
170_L	198_G	1.980	1.00
54_E	58_I	1.953	1.00
50_K	96_G	1.953	1.00
108_K	130_L	1.944	1.00
97_Y	113_Q	1.937	1.00
55_E	59_D	1.927	1.00
92_L	199_V	1.927	1.00
102_S	111_R	1.916	1.00
109_T	204_T	1.904	1.00
58_I	62_K	1.887	1.00
54_E	201_L	1.872	1.00
167_S	181_T	1.861	1.00
168_F	190_V	1.835	1.00
125_V	207_L	1.829	1.00
109_T	166_K	1.828	1.00
57_L	199_V	1.804	1.00
52_Q	56_M	1.787	1.00
189_A	457_K	1.774	1.00
74_A	77_Q	1.766	1.00
108_K	209_D	1.760	1.00
53_E	56_M	1.754	1.00
112_V	143_I	1.747	1.00
110_I	205_L	1.742	1.00
59_D	62_K	1.731	1.00
61_V	467_F	1.728	1.00
276_E	279_E	1.720	1.00
423_V	426_K	1.706	1.00
422_D	426_K	1.704	1.00
73_I	199_V	1.696	1.00
148_S	193_G	1.694	1.00
94_M	199_V	1.688	1.00
452_E	455_F	1.661	1.00
103_L	124_Y	1.659	1.00
456_Q	460_T	1.651	1.00
169_R	201_L	1.647	1.00
459_R	465_E	1.625	1.00
147_L	165_V	1.617	1.00
452_E	456_Q	1.599	1.00
120_D	123_K	1.598	1.00
124_Y	128_Y	1.594	1.00
422_D	446_Q	1.580	1.00
415_R	419_R	1.579	1.00
366_D	419_R	1.565	1.00
411_A	415_R	1.559	1.00
64_A	90_I	1.555	1.00
359_D	423_V	1.550	1.00
61_V	65_N	1.533	1.00
362_Q	366_D	1.520	1.00
94_M	97_Y	1.511	1.00
62_K	65_N	1.506	1.00
227_D	230_S	1.504	1.00
57_L	171_L	1.502	1.00
100_I	124_Y	1.483	1.00
63_E	69_I	1.478	1.00
453_A	456_Q	1.477	1.00
104_D	109_T	1.472	1.00
349_P	352_E	1.469	1.00
230_S	234_K	1.463	1.00
359_D	362_Q	1.453	1.00
409_D	412_D	1.451	1.00
148_S	200_I	1.451	1.00
164_T	208_T	1.451	1.00
432_Y	437_T	1.449	1.00
146_S	161_L	1.427	1.00
26_E	29_T	1.424	1.00
61_V	199_V	1.423	1.00
165_V	168_F	1.422	1.00
171_L	201_L	1.421	1.00
147_L	205_L	1.417	1.00
49_V	90_I	1.415	1.00
173_A	461_Y	1.415	1.00
112_V	205_L	1.402	1.00
180_V	183_K	1.400	1.00
226_S	230_S	1.400	1.00
317_T	320_S	1.386	1.00
455_F	459_R	1.386	1.00
190_V	198_G	1.366	1.00
177_I	201_L	1.361	1.00
61_V	171_L	1.354	1.00
113_Q	116_A	1.352	1.00
298_W	301_N	1.315	1.00
24_N	29_T	1.315	1.00
270_Q	273_S	1.311	1.00
289_A	293_S	1.303	1.00
123_K	127_P	1.297	1.00
62_K	66_R	1.289	1.00
458_K	465_E	1.281	1.00
133_K	164_T	1.274	1.00
355_S	359_D	1.270	1.00
451_S	455_F	1.266	1.00
319_I	323_N	1.264	1.00
359_D	427_H	1.258	1.00
180_V	187_F	1.250	1.00
171_L	177_I	1.249	1.00
418_R	422_D	1.248	1.00
57_L	92_L	1.244	1.00
290_L	294_R	1.240	1.00
297_E	300_R	1.231	1.00
51_G	56_M	1.227	1.00
98_N	113_Q	1.226	1.00
110_I	207_L	1.225	1.00
56_M	59_D	1.224	1.00
450_K	453_A	1.224	1.00
141_F	146_S	1.223	1.00
51_G	60_T	1.221	1.00
326_R	330_K	1.213	1.00
223_S	227_D	1.207	1.00
293_S	297_E	1.206	1.00
300_R	304_W	1.199	1.00
112_V	121_I	1.198	1.00
367_E	419_R	1.185	1.00
99_K	116_A	1.184	1.00
50_K	93_D	1.183	1.00
103_L	110_I	1.175	1.00
301_N	304_W	1.165	1.00
291_G	295_R	1.164	1.00
60_T	90_I	1.164	1.00
60_T	92_L	1.153	1.00
64_A	71_I	1.153	1.00
288_F	291_G	1.151	1.00
308_Q	311_F	1.144	1.00
414_A	418_R	1.142	1.00
408_E	411_A	1.142	1.00
165_V	191_I	1.135	1.00
361_R	365_S	1.129	1.00
27_Q	30_A	1.127	1.00
283_T	287_K	1.127	1.00
159_G	163_D	1.125	1.00
412_D	415_R	1.123	1.00
322_N	325_M	1.120	1.00
65_N	466_R	1.120	1.00
283_T	286_T	1.106	1.00
58_I	171_L	1.094	1.00
110_I	125_V	1.088	1.00
287_K	291_G	1.088	1.00
291_G	294_R	1.087	1.00
276_E	280_D	1.087	1.00
358_D	362_Q	1.083	1.00
251_K	255_K	1.083	1.00
122_Q	135_M	1.078	1.00
323_N	326_R	1.075	1.00
172_K	461_Y	1.074	1.00
406_S	409_D	1.073	1.00
71_I	92_L	1.068	1.00
178_I	183_K	1.063	1.00
256_D	260_T	1.062	1.00
329_S	333_E	1.061	1.00
325_M	328_E	1.059	1.00
147_L	161_L	1.055	1.00
168_F	187_F	1.046	1.00
318_E	322_N	1.046	1.00
190_V	200_I	1.045	1.00
363_T	419_R	1.041	1.00
103_L	130_L	1.037	1.00
75_G	142_T	1.037	1.00
290_L	293_S	1.035	1.00
307_Q	310_Y	1.029	1.00
188_T	453_A	1.027	1.00
244_A	247_S	1.027	1.00
120_D	124_Y	1.020	1.00
328_E	331_F	1.018	1.00
456_Q	459_R	1.016	1.00
307_Q	311_F	1.008	1.00
47_Q	90_I	1.007	1.00
68_N	466_R	1.007	1.00
284_G	287_K	1.006	1.00
269_D	272_S	1.004	1.00
243_L	247_S	0.995	1.00
222_Y	231_K	0.992	1.00
69_I	90_I	0.990	1.00
407_K	411_A	0.974	1.00
319_I	322_N	0.973	1.00
363_T	423_V	0.972	1.00
433_L	436_M	0.968	1.00
354_G	358_D	0.965	1.00
282_Y	286_T	0.962	1.00
144_G	203_V	0.962	1.00
50_K	95_T	0.961	1.00
419_R	422_D	0.959	1.00
356_Y	360_L	0.958	1.00
322_N	326_R	0.955	1.00
54_E	113_Q	0.949	1.00
306_T	310_Y	0.946	1.00
62_K	176_M	0.944	1.00
226_S	354_G	0.944	1.00
118_W	135_M	0.940	1.00
54_E	171_L	0.940	1.00
327_S	331_F	0.938	1.00
445_R	451_S	0.937	1.00
257_M	260_T	0.936	1.00
30_A	34_M	0.935	1.00
281_E	284_G	0.933	1.00
304_W	307_Q	0.933	1.00
250_K	254_L	0.932	1.00
340_T	343_L	0.930	1.00
431_Y	434_P	0.929	1.00
46_K	88_D	0.923	1.00
279_E	282_Y	0.921	1.00
362_Q	365_S	0.920	1.00
343_L	346_Y	0.917	1.00
94_M	114_S	0.917	1.00
185_D	188_T	0.911	1.00
170_L	178_I	0.906	1.00
305_D	308_Q	0.905	1.00
189_A	197_F	0.905	1.00
74_A	91_V	0.904	1.00
33_E	50_K	0.904	1.00
434_P	437_T	0.899	1.00
104_D	111_R	0.898	1.00
444_M	448_Y	0.898	1.00
252_G	255_K	0.895	1.00
321_R	325_M	0.895	1.00
297_E	301_N	0.891	1.00
164_T	206_E	0.889	1.00
415_R	418_R	0.887	1.00
30_A	44_K	0.887	1.00
179_T	204_T	0.885	1.00
278_K	282_Y	0.884	1.00
380_Q	383_E	0.882	1.00
284_G	288_F	0.882	1.00
277_L	280_D	0.878	1.00
355_S	358_D	0.878	1.00
320_S	323_N	0.876	1.00
119_N	139_N	0.874	1.00
133_K	208_T	0.874	1.00
74_A	93_D	0.873	1.00
59_D	63_E	0.873	1.00
347_F	430_S	0.872	1.00
118_W	146_S	0.871	1.00
70_K	89_G	0.871	1.00
271_L	275_S	0.869	1.00
254_L	257_M	0.868	1.00
24_N	50_K	0.867	1.00
76_A	142_T	0.867	1.00
295_R	298_W	0.861	1.00
71_I	466_R	0.857	1.00
269_D	273_S	0.856	1.00
296_Y	300_R	0.855	1.00
130_L	209_D	0.854	1.00
255_K	263_V	0.853	1.00
324_V	328_E	0.853	1.00
143_I	205_L	0.850	1.00
330_K	333_E	0.845	1.00
278_K	281_E	0.844	1.00
243_L	246_I	0.844	1.00
75_G	94_M	0.842	1.00
31_T	34_M	0.842	1.00
180_V	190_V	0.841	1.00
241_M	244_A	0.838	1.00
119_N	140_I	0.837	1.00
241_M	245_R	0.837	1.00
57_L	94_M	0.835	1.00
242_H	245_R	0.834	1.00
336_N	339_N	0.833	1.00
423_V	427_H	0.832	1.00
364_L	368_D	0.832	1.00
25_S	30_A	0.832	1.00
255_K	258_Y	0.831	1.00
29_T	32_S	0.831	1.00
79_S	83_H	0.829	1.00
304_W	308_Q	0.828	1.00
328_E	332_L	0.827	1.00
31_T	44_K	0.826	1.00
272_S	275_S	0.824	1.00
35_T	42_P	0.822	1.00
144_G	148_S	0.819	1.00
143_I	203_V	0.819	1.00
168_F	203_V	0.817	1.00
75_G	114_S	0.816	1.00
326_R	329_S	0.814	1.00
54_E	57_L	0.811	1.00
54_E	97_Y	0.811	1.00
98_N	116_A	0.809	1.00
165_V	203_V	0.806	1.00
425_I	446_Q	0.803	1.00
308_Q	312_L	0.802	1.00
193_G	197_F	0.801	1.00
116_A	120_D	0.800	1.00
179_T	202_D	0.797	1.00
166_K	204_T	0.796	1.00
356_Y	427_H	0.795	1.00
185_D	460_T	0.794	1.00
432_Y	435_Y	0.794	1.00
95_T	142_T	0.793	1.00
287_K	290_L	0.793	1.00
260_T	264_L	0.792	1.00
228_Y	233_V	0.792	1.00
355_S	427_H	0.792	1.00
70_K	468_M	0.792	1.00
200_I	203_V	0.792	1.00
110_I	124_Y	0.791	1.00
340_T	344_Q	0.789	1.00
303_L	308_Q	0.785	1.00
109_T	206_E	0.784	1.00
327_S	330_K	0.784	1.00
285_A	291_G	0.783	1.00
26_E	30_A	0.782	1.00
442_A	445_R	0.780	1.00
320_S	325_M	0.780	1.00
231_K	234_K	0.777	1.00
304_W	311_F	0.777	1.00
440_T	443_Q	0.776	1.00
363_T	366_D	0.776	1.00
57_L	97_Y	0.772	1.00
118_W	121_I	0.772	1.00
51_G	94_M	0.770	1.00
234_K	306_T	0.767	1.00
33_E	48_T	0.767	1.00
374_I	379_V	0.766	1.00
303_L	306_T	0.765	1.00
260_T	263_V	0.765	1.00
255_K	260_T	0.765	1.00
25_S	47_Q	0.763	1.00
367_E	415_R	0.762	1.00
441_K	445_R	0.760	1.00
419_R	423_V	0.759	1.00
147_L	200_I	0.749	1.00
262_Y	265_A	0.748	1.00
294_R	297_E	0.747	1.00
370_N	373_N	0.746	1.00
359_D	363_T	0.745	1.00
352_E	427_H	0.744	1.00
252_G	259_V	0.743	1.00
285_A	293_S	0.742	1.00
286_T	293_S	0.742	1.00
174_D	178_I	0.742	1.00
325_M	332_L	0.742	1.00
410_Q	414_A	0.740	1.00
458_K	468_M	0.737	1.00
229_F	233_V	0.736	1.00
259_V	262_Y	0.734	1.00
270_Q	275_S	0.733	1.00
242_H	247_S	0.728	1.00
221_N	224_T	0.725	1.00
181_T	184_D	0.725	1.00
282_Y	285_A	0.722	1.00
65_N	174_D	0.721	1.00
73_I	94_M	0.721	1.00
213_Y	216_K	0.718	1.00
425_I	428_G	0.718	1.00
253_F	258_Y	0.717	1.00
434_P	438_Y	0.715	1.00
114_S	203_V	0.713	1.00
168_F	200_I	0.713	1.00
327_S	333_E	0.712	1.00
224_T	228_Y	0.709	1.00
51_G	96_G	0.706	1.00
321_R	324_V	0.706	1.00
369_L	374_I	0.704	1.00
285_A	288_F	0.703	1.00
131_A	210_D	0.701	1.00
301_N	305_D	0.699	1.00
325_M	329_S	0.698	1.00
55_E	177_I	0.695	1.00
317_T	321_R	0.691	1.00
97_Y	201_L	0.690	1.00
257_M	261_N	0.688	1.00
452_E	459_R	0.688	1.00
457_K	461_Y	0.688	1.00
72_S	89_G	0.687	1.00
407_K	410_Q	0.686	1.00
95_T	117_T	0.686	1.00
121_I	143_I	0.684	1.00
30_A	33_E	0.684	1.00
129_G	210_D	0.680	1.00
290_L	295_R	0.679	1.00
339_N	343_L	0.678	1.00
118_W	141_F	0.677	1.00
322_N	329_S	0.676	1.00
277_L	282_Y	0.676	1.00
48_T	91_V	0.676	1.00
422_D	425_I	0.676	1.00
411_A	414_A	0.674	1.00
335_E	339_N	0.673	1.00
316_G	320_S	0.671	1.00
282_Y	288_F	0.671	1.00
27_Q	31_T	0.671	1.00
318_E	321_R	0.671	1.00
444_M	451_S	0.670	1.00
324_V	329_S	0.670	1.00
445_R	452_E	0.667	1.00
271_L	274_Y	0.666	1.00
34_M	42_P	0.666	1.00
286_T	292_L	0.663	1.00
160_S	163_D	0.661	1.00
250_K	253_F	0.661	1.00
358_D	361_R	0.661	1.00
230_S	233_V	0.659	1.00
294_R	298_W	0.659	1.00
302_W	306_T	0.657	1.00
46_K	89_G	0.656	1.00
285_A	290_L	0.655	1.00
299_G	302_W	0.654	1.00
258_Y	262_Y	0.653	1.00
444_M	447_A	0.651	1.00
285_A	295_R	0.650	1.00
379_V	382_N	0.650	1.00
289_A	295_R	0.650	1.00
173_A	466_R	0.648	1.00
125_V	128_Y	0.648	1.00
319_I	325_M	0.647	1.00
100_I	112_V	0.647	1.00
465_E	468_M	0.645	1.00
408_E	412_D	0.645	1.00
273_S	276_E	0.645	1.00
277_L	281_E	0.644	1.00
306_T	311_F	0.644	1.00
338_D	344_Q	0.642	1.00
340_T	345_E	0.642	1.00
76_A	117_T	0.640	1.00
167_S	202_D	0.640	1.00
293_S	300_R	0.639	1.00
252_G	256_D	0.637	1.00
364_L	367_E	0.636	1.00
327_S	332_L	0.636	1.00
328_E	333_E	0.634	1.00
56_M	60_T	0.634	1.00
108_K	206_E	0.634	1.00
216_K	219_K	0.634	1.00
365_S	368_D	0.632	1.00
61_V	173_A	0.632	1.00
284_G	289_A	0.632	1.00
431_Y	437_T	0.630	1.00
433_L	437_T	0.628	1.00
228_Y	232_H	0.628	1.00
445_R	448_Y	0.628	1.00
23_V	49_V	0.627	1.00
440_T	444_M	0.625	1.00
123_K	126_N	0.625	1.00
432_Y	436_M	0.624	1.00
341_D	344_Q	0.623	1.00
103_L	128_Y	0.622	1.00
286_T	291_G	0.620	1.00
341_D	345_E	0.619	1.00
51_G	57_L	0.619	1.00
370_N	374_I	0.619	1.00
226_S	355_S	0.619	1.00
45_I	91_V	0.618	1.00
250_K	255_K	0.617	1.00
138_Q	141_F	0.617	1.00
255_K	259_V	0.614	1.00
379_V	383_E	0.613	1.00
286_T	289_A	0.612	1.00
122_Q	131_A	0.611	1.00
429_G	436_M	0.609	1.00
270_Q	274_Y	0.609	1.00
451_S	454_F	0.607	1.00
300_R	307_Q	0.607	1.00
303_L	311_F	0.607	1.00
302_W	305_D	0.606	1.00
288_F	293_S	0.606	1.00
39_R	42_P	0.606	1.00
58_I	61_V	0.606	1.00
285_A	289_A	0.605	1.00
317_T	325_M	0.604	1.00
326_R	331_F	0.603	1.00
228_Y	231_K	0.603	1.00
187_F	191_I	0.603	1.00
54_E	202_D	0.603	1.00
356_Y	364_L	0.602	1.00
437_T	444_M	0.602	1.00
28_K	32_S	0.601	1.00
275_S	278_K	0.598	1.00
150_N	160_S	0.597	1.00
284_G	291_G	0.596	1.00
289_A	297_E	0.596	1.00
252_G	258_Y	0.596	1.00
335_E	341_D	0.594	1.00
63_E	90_I	0.592	1.00
431_Y	436_M	0.591	1.00
185_D	457_K	0.589	1.00
443_Q	446_Q	0.589	1.00
118_W	143_I	0.588	1.00
282_Y	289_A	0.588	1.00
105_Q	108_K	0.586	1.00
342_V	345_E	0.585	1.00
222_Y	228_Y	0.585	1.00
24_N	30_A	0.585	1.00
102_S	105_Q	0.580	1.00
413_T	417_I	0.579	1.00
319_I	324_V	0.577	1.00
445_R	449_P	0.577	1.00
417_I	421_T	0.576	1.00
259_V	264_L	0.576	1.00
79_S	84_T	0.576	1.00
296_Y	301_N	0.576	1.00
256_D	263_V	0.574	1.00
287_K	295_R	0.574	1.00
119_N	138_Q	0.573	1.00
337_N	340_T	0.573	1.00
168_F	180_V	0.572	1.00
316_G	321_R	0.571	1.00
324_V	332_L	0.571	1.00
134_V	164_T	0.569	1.00
335_E	338_D	0.569	1.00
103_L	207_L	0.569	1.00
325_M	331_F	0.568	1.00
285_A	296_Y	0.568	1.00
250_K	257_M	0.567	1.00
86_Y	89_G	0.567	1.00
315_N	320_S	0.567	1.00
281_E	289_A	0.565	1.00
303_L	307_Q	0.563	1.00
173_A	464_D	0.563	1.00
107_K	351_K	0.562	1.00
404_G	410_Q	0.560	1.00
100_I	113_Q	0.560	1.00
315_N	324_V	0.559	1.00
38_S	41_M	0.559	1.00
339_N	342_V	0.559	1.00
304_W	310_Y	0.558	1.00
253_F	257_M	0.558	1.00
296_Y	299_G	0.558	1.00
320_S	324_V	0.558	1.00
24_N	27_Q	0.556	1.00
324_V	331_F	0.555	1.00
27_Q	44_K	0.555	1.00
255_K	261_N	0.553	1.00
429_G	432_Y	0.553	1.00
300_R	303_L	0.553	1.00
280_D	283_T	0.553	1.00
410_Q	413_T	0.551	1.00
251_K	257_M	0.550	1.00
149_A	434_P	0.549	1.00
261_N	264_L	0.548	1.00
336_N	340_T	0.547	1.00
300_R	311_F	0.547	1.00
136_Q	146_S	0.547	1.00
281_E	291_G	0.546	1.00
122_Q	125_V	0.546	1.00
435_Y	438_Y	0.545	1.00
29_T	33_E	0.545	1.00
104_D	108_K	0.545	1.00
305_D	311_F	0.543	1.00
369_L	373_N	0.542	1.00
329_S	332_L	0.542	1.00
259_V	263_V	0.541	1.00
334_Y	339_N	0.540	1.00
318_E	324_V	0.540	1.00
169_R	204_T	0.539	1.00
254_L	258_Y	0.538	1.00
107_K	206_E	0.538	1.00
122_Q	210_D	0.537	1.00
72_S	86_Y	0.536	1.00
117_T	142_T	0.536	1.00
257_M	262_Y	0.536	1.00
285_A	292_L	0.534	1.00
183_K	461_Y	0.534	1.00
279_E	284_G	0.532	1.00
241_M	246_I	0.532	1.00
395_F	399_L	0.532	1.00
241_M	247_S	0.531	1.00
112_V	116_A	0.530	1.00
197_F	457_K	0.530	1.00
338_D	345_E	0.526	1.00
188_T	191_I	0.524	1.00
43_V	87_E	0.523	1.00
132_V	207_L	0.522	1.00
99_K	102_S	0.521	1.00
166_K	182_P	0.519	1.00
196_L	458_K	0.518	1.00
158_Y	208_T	0.518	1.00
280_D	285_A	0.518	1.00
315_N	319_I	0.517	1.00
44_K	87_E	0.517	1.00
168_F	191_I	0.517	1.00
107_K	204_T	0.516	1.00
315_N	318_E	0.515	1.00
324_V	327_S	0.515	1.00
300_R	308_Q	0.512	0.99
272_S	276_E	0.511	0.99
361_R	364_L	0.511	0.99
280_D	284_G	0.510	0.99
182_P	187_F	0.510	0.99
222_Y	225_Y	0.509	0.99
242_H	246_I	0.509	0.99
251_K	256_D	0.508	0.99
295_R	299_G	0.508	0.99
303_L	310_Y	0.508	0.99
287_K	292_L	0.507	0.99
165_V	205_L	0.507	0.99
132_V	205_L	0.505	0.99
344_Q	347_F	0.504	0.99
323_N	330_K	0.504	0.99
263_V	266_N	0.504	0.99
288_F	292_L	0.503	0.99
317_T	323_N	0.503	0.99
282_Y	293_S	0.502	0.99
281_E	285_A	0.501	0.99
51_G	97_Y	0.501	0.99
105_Q	130_L	0.500	0.99
182_P	191_I	0.500	0.99

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3pm9A	5	0.9328	100	0.357	Contact Map
4xloA	2	0.9391	100	0.371	Contact Map
4p8nA	1	0.9076	100	0.374	Contact Map
2vfrA	1	0.8655	100	0.385	Contact Map
2uuuA	2	0.8992	100	0.391	Contact Map
3js8A	1	0.9496	100	0.4	Contact Map
4ud8A	1	0.9517	100	0.402	Contact Map
4pvkA	1	0.9223	100	0.404	Contact Map
3vteA	1	0.937	100	0.409	Contact Map
2i0kA	1	0.9412	100	0.411	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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