PBPH - BACSU - GREMLIN Contacts

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PBPH - Penicillin-binding protein H

UniProt:	Q796K8	Sequences: MTEIGREPKKKSKGNRAIRMNLFFLAVFVLFTALIFKLGVVQIVEGEQHEEDAEKSNAKTAYYPAPRGKMYDRNQKVAVDNQSVPEIVYVSTSSTKTEDKIKTAKRLASFIHIDTEFLKERDLRDYWIAAHPKKAAALLKESESNLKGDQAYKLQIERVPDQELKAIQQDDEEMETAAIYTRFSSGNAYEPQIVKAMNPNKSNSNGKNGALLDEKKNSSQRPKNDLTYDEISIVSEHLEELPGIDIVNDWTRKYPYDKTLYSVFGGVTTPDQGLLSDRKDFYLTRGYANNDRVGKSYLEYQYEEYLNSHKEKVEYVEDNKGNVVSQKTIDKGSRGYDLQLSFDMELQAKVEKIIEEEVRNSRARGNYMLDRAFAVMMDPNNGDILSMAGKKIDLKTNKIEDYAIGAFTTQYEMGSAVKGATVLAGYQDGIPHYKYYIDAPMLLGTNLIKKSYTNMGTINELTALQKSSNVYMFNVAMHIAGVTYKPHGSLPADQNDLLKMRNYYSQFGLGVKTGIDLPQESAGMQTTPKTVGGLILDLAIGQYDTYTPLQMAQYISVIANGGYRVQPRIVTSIHKPGKKDQLGKAIEHRKPKVLNKINNSESDLKQVQTGMKLVTSSGTAKNTFTEDVSGKTGTAETFYYGTNRNWWGKKTYNLTFVGYYPSKKPKVAFSVVVPSVDDDDKINKIIAKRAIHAYAELEKKHSKK	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	704 (525)
Sequences:	1410 (1103)
Seq/√Len:	48.1

ECOLI - PBP2 PBPB PBPC PBPA FTSI
BACSU - PBPH YQGF PBPA PBPF PBPG PBPB SP5D PBPD PBPI PBPC

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
248_N	258_K	5.658	1.00
295_K	299_E	4.874	1.00
580_D	584_K	4.096	1.00
374_A	690_A	3.802	1.00
153_K	157_E	3.713	1.00
316_V	320_K	3.464	1.00
608_Q	659_Y	3.362	1.00
657_V	670_S	3.248	1.00
288_A	298_L	3.215	1.00
316_V	341_S	3.134	1.00
630_G	656_F	3.104	1.00
354_I	372_A	3.102	1.00
128_I	337_D	3.101	1.00
294_G	297_Y	3.062	1.00
148_G	156_I	3.044	1.00
552_A	670_S	2.965	1.00
288_A	295_K	2.964	1.00
561_G	605_K	2.946	1.00
155_Q	247_V	2.923	1.00
174_M	177_A	2.825	1.00
248_N	259_T	2.758	1.00
168_Q	229_D	2.747	1.00
376_M	669_F	2.670	1.00
252_R	256_Y	2.634	1.00
563_Y	597_I	2.601	1.00
384_I	569_I	2.599	1.00
129_A	133_K	2.587	1.00
146_L	151_A	2.577	1.00
695_A	698_E	2.574	1.00
350_V	374_A	2.491	1.00
405_G	676_V	2.481	1.00
383_D	568_R	2.449	1.00
379_P	668_A	2.401	1.00
629_S	659_Y	2.400	1.00
287_Y	293_V	2.371	1.00
376_M	690_A	2.340	1.00
553_Q	567_P	2.328	1.00
156_I	229_D	2.279	1.00
461_L	609_T	2.268	1.00
128_I	339_Q	2.261	1.00
339_Q	572_S	2.246	1.00
558_I	607_V	2.240	1.00
298_L	302_Y	2.215	1.00
348_A	352_K	2.114	1.00
428_D	499_K	2.104	1.00
147_K	150_Q	2.089	1.00
427_Q	603_D	2.084	1.00
126_Y	134_K	2.083	1.00
658_G	691_I	2.058	1.00
148_G	229_D	2.055	1.00
154_L	157_E	2.053	1.00
320_K	323_V	2.044	1.00
421_T	539_A	2.031	1.00
293_V	298_L	2.031	1.00
159_V	264_F	2.019	1.00
161_D	290_N	2.009	0.99
148_G	233_I	2.005	0.99
287_Y	298_L	1.982	0.99
553_Q	564_R	1.975	0.99
375_V	548_P	1.956	0.99
503_Y	507_F	1.942	0.99
153_K	156_I	1.928	0.99
190_E	199_P	1.912	0.99
287_Y	292_R	1.906	0.99
688_K	692_H	1.880	0.99
152_Y	259_T	1.876	0.99
156_I	168_Q	1.862	0.99
377_M	552_A	1.859	0.99
154_L	260_L	1.856	0.99
170_D	223_K	1.851	0.99
600_S	603_D	1.849	0.99
458_I	468_S	1.846	0.99
262_S	282_Y	1.837	0.99
288_A	293_V	1.829	0.99
667_V	694_Y	1.828	0.99
161_D	292_R	1.801	0.99
460_E	475_V	1.791	0.99
611_M	659_Y	1.784	0.99
226_L	234_V	1.782	0.99
315_Y	320_K	1.779	0.99
654_L	683_N	1.766	0.99
306_L	310_K	1.760	0.99
160_P	168_Q	1.747	0.99
378_D	383_D	1.728	0.98
337_D	574_H	1.712	0.98
462_T	465_Q	1.701	0.98
383_D	571_T	1.698	0.98
313_V	320_K	1.696	0.98
597_I	601_E	1.689	0.98
130_A	343_D	1.679	0.98
350_V	388_A	1.674	0.98
557_V	564_R	1.668	0.98
159_V	267_V	1.655	0.98
166_A	170_D	1.646	0.98
423_L	503_Y	1.634	0.98
287_Y	297_Y	1.629	0.98
417_V	504_Y	1.629	0.98
316_V	323_V	1.625	0.98
282_Y	285_R	1.622	0.98
437_I	457_T	1.614	0.98
205_N	208_N	1.613	0.98
313_V	316_V	1.612	0.98
658_G	687_A	1.608	0.97
244_I	253_K	1.595	0.97
374_A	671_V	1.592	0.97
314_E	320_K	1.591	0.97
399_I	402_Y	1.588	0.97
378_D	381_N	1.577	0.97
316_V	319_N	1.574	0.97
423_L	607_V	1.562	0.97
559_A	629_S	1.558	0.97
461_L	613_L	1.553	0.97
155_Q	159_V	1.550	0.97
377_M	668_A	1.539	0.97
559_A	659_Y	1.530	0.97
148_G	151_A	1.529	0.97
346_L	386_S	1.526	0.97
299_E	302_Y	1.518	0.96
195_K	215_K	1.508	0.96
227_T	230_E	1.485	0.96
427_Q	506_Q	1.483	0.96
338_L	573_I	1.481	0.96
152_Y	155_Q	1.471	0.96
159_V	241_L	1.470	0.96
465_Q	613_L	1.470	0.96
349_K	693_A	1.470	0.96
427_Q	600_S	1.469	0.96
404_I	407_F	1.467	0.96
148_G	232_S	1.458	0.95
242_P	253_K	1.449	0.95
436_Y	478_H	1.446	0.95
163_E	167_I	1.439	0.95
551_M	657_V	1.436	0.95
336_Y	586_I	1.426	0.95
553_Q	556_S	1.426	0.95
476_A	500_M	1.422	0.95
507_F	599_N	1.408	0.95
127_W	138_L	1.406	0.94
667_V	695_A	1.404	0.94
385_L	667_V	1.397	0.94
198_N	222_P	1.389	0.94
614_V	630_G	1.387	0.94
317_E	320_K	1.385	0.94
146_L	150_Q	1.382	0.94
555_I	657_V	1.382	0.94
599_N	603_D	1.378	0.94
339_Q	574_H	1.376	0.94
240_E	243_G	1.374	0.94
289_N	293_V	1.374	0.94
617_S	621_K	1.367	0.94
653_N	672_V	1.359	0.93
548_P	552_A	1.358	0.93
608_Q	629_S	1.350	0.93
687_A	691_I	1.337	0.93
375_V	549_L	1.331	0.93
615_T	628_V	1.331	0.93
419_G	558_I	1.324	0.92
609_T	612_K	1.322	0.92
353_I	689_R	1.318	0.92
165_K	290_N	1.314	0.92
155_Q	260_L	1.311	0.92
455_M	468_S	1.305	0.92
462_T	466_K	1.301	0.92
432_H	610_G	1.300	0.92
164_L	170_D	1.300	0.92
181_T	185_S	1.292	0.92
316_V	321_G	1.286	0.91
551_M	655_T	1.282	0.91
585_A	588_H	1.282	0.91
666_K	698_E	1.270	0.91
458_I	462_T	1.267	0.91
615_T	630_G	1.263	0.91
425_G	475_V	1.259	0.90
435_Y	457_T	1.254	0.90
503_Y	599_N	1.253	0.90
438_D	456_G	1.253	0.90
566_Q	592_K	1.252	0.90
474_N	478_H	1.251	0.90
148_G	168_Q	1.250	0.90
305_Y	308_S	1.243	0.90
349_K	353_I	1.240	0.90
548_P	670_S	1.234	0.90
182_R	186_G	1.229	0.89
422_V	472_M	1.226	0.89
413_M	542_Q	1.219	0.89
134_K	137_A	1.219	0.89
287_Y	296_S	1.215	0.89
423_L	507_F	1.214	0.89
460_E	610_G	1.212	0.89
601_E	605_K	1.204	0.88
619_T	656_F	1.200	0.88
558_I	608_Q	1.200	0.88
499_K	502_N	1.192	0.88
564_R	567_P	1.192	0.88
317_E	321_G	1.191	0.88
327_K	330_D	1.188	0.88
295_K	298_L	1.180	0.87
420_A	504_Y	1.180	0.87
620_A	623_T	1.177	0.87
653_N	674_P	1.176	0.87
570_V	573_I	1.174	0.87
166_A	169_Q	1.170	0.87
415_S	418_K	1.167	0.87
177_A	188_A	1.165	0.87
413_M	546_Y	1.164	0.87
287_Y	291_D	1.162	0.86
615_T	656_F	1.161	0.86
572_S	585_A	1.161	0.86
194_V	198_N	1.155	0.86
378_D	385_L	1.147	0.86
614_V	620_A	1.146	0.86
319_N	324_V	1.141	0.85
318_D	321_G	1.140	0.85
460_E	471_Y	1.135	0.85
412_E	655_T	1.128	0.85
384_I	387_M	1.121	0.84
441_M	477_M	1.120	0.84
289_N	298_L	1.115	0.84
350_V	376_M	1.109	0.84
573_I	587_E	1.102	0.83
477_M	536_L	1.098	0.83
459_N	462_T	1.097	0.83
306_L	309_H	1.092	0.83
346_L	385_L	1.089	0.83
558_I	659_Y	1.088	0.83
157_E	168_Q	1.087	0.83
612_K	627_D	1.087	0.83
350_V	690_A	1.084	0.82
432_H	435_Y	1.082	0.82
287_Y	290_N	1.079	0.82
411_Y	653_N	1.076	0.82
287_Y	302_Y	1.076	0.82
281_F	284_T	1.075	0.82
311_E	317_E	1.074	0.82
612_K	615_T	1.069	0.81
157_E	292_R	1.068	0.81
614_V	619_T	1.064	0.81
422_V	464_L	1.064	0.81
297_Y	300_Y	1.063	0.81
346_L	694_Y	1.063	0.81
156_I	233_I	1.061	0.81
464_L	472_M	1.060	0.81
404_I	408_T	1.058	0.81
412_E	635_A	1.056	0.81
315_Y	319_N	1.045	0.80
551_M	670_S	1.044	0.80
292_R	298_L	1.040	0.80
468_S	471_Y	1.036	0.79
318_D	322_N	1.034	0.79
671_V	687_A	1.030	0.79
314_E	323_V	1.021	0.78
390_K	405_G	1.021	0.78
319_N	323_V	1.019	0.78
351_E	388_A	1.016	0.78
315_Y	323_V	1.016	0.78
278_R	282_Y	1.011	0.78
423_L	603_D	1.011	0.78
279_K	285_R	1.003	0.77
502_N	506_Q	1.003	0.77
240_E	244_I	1.001	0.77
464_L	607_V	0.998	0.77
269_T	272_Q	0.995	0.77
312_K	316_V	0.994	0.77
498_L	502_N	0.994	0.77
314_E	319_N	0.993	0.76
458_I	463_A	0.993	0.76
420_A	554_Y	0.992	0.76
321_G	324_V	0.991	0.76
467_S	631_K	0.982	0.76
371_R	405_G	0.978	0.75
181_T	188_A	0.974	0.75
289_N	292_R	0.974	0.75
424_A	503_Y	0.966	0.74
146_L	259_T	0.964	0.74
346_L	376_M	0.963	0.74
403_A	408_T	0.962	0.74
182_R	185_S	0.960	0.74
315_Y	318_D	0.959	0.74
661_P	666_K	0.959	0.74
565_V	595_N	0.952	0.73
354_I	388_A	0.951	0.73
654_L	679_D	0.950	0.73
294_G	298_L	0.949	0.73
619_T	630_G	0.941	0.72
151_A	155_Q	0.936	0.72
158_R	164_L	0.934	0.72
554_Y	558_I	0.934	0.72
282_Y	286_G	0.929	0.71
313_V	321_G	0.927	0.71
426_Y	606_Q	0.919	0.71
419_G	607_V	0.919	0.71
435_Y	439_A	0.917	0.70
148_G	160_P	0.916	0.70
167_I	196_A	0.916	0.70
314_E	317_E	0.915	0.70
444_G	447_L	0.913	0.70
287_Y	294_G	0.912	0.70
379_P	556_S	0.911	0.70
344_M	348_A	0.909	0.70
673_V	686_I	0.904	0.69
189_Y	195_K	0.904	0.69
315_Y	321_G	0.897	0.69
312_K	320_K	0.896	0.69
412_E	653_N	0.895	0.69
304_E	308_S	0.890	0.68
293_V	296_S	0.885	0.68
418_K	469_N	0.883	0.68
572_S	588_H	0.883	0.68
287_Y	303_E	0.878	0.67
130_A	385_L	0.877	0.67
189_Y	193_I	0.871	0.67
175_E	178_A	0.868	0.66
230_E	233_I	0.864	0.66
316_V	324_V	0.862	0.66
262_S	265_G	0.861	0.66
376_M	667_V	0.858	0.65
179_I	182_R	0.856	0.65
375_V	387_M	0.855	0.65
480_A	497_L	0.854	0.65
608_Q	611_M	0.854	0.65
448_I	536_L	0.853	0.65
615_T	624_F	0.853	0.65
680_D	683_N	0.852	0.65
193_I	239_E	0.849	0.65
175_E	182_R	0.848	0.64
417_V	546_Y	0.848	0.64
144_S	248_N	0.846	0.64
628_V	687_A	0.846	0.64
463_A	471_Y	0.846	0.64
293_V	297_Y	0.845	0.64
346_L	690_A	0.845	0.64
251_T	260_L	0.843	0.64
465_Q	617_S	0.843	0.64
179_I	184_S	0.841	0.64
163_E	166_A	0.838	0.63
464_L	610_G	0.831	0.63
655_T	672_V	0.831	0.63
299_E	566_Q	0.830	0.63
164_L	167_I	0.829	0.63
345_E	697_L	0.828	0.63
476_A	497_L	0.828	0.63
469_N	631_K	0.828	0.63
473_F	540_I	0.827	0.62
373_F	548_P	0.827	0.62
158_R	163_E	0.824	0.62
190_E	194_V	0.824	0.62
198_N	202_S	0.824	0.62
403_A	409_T	0.823	0.62
346_L	349_K	0.823	0.62
563_Y	593_V	0.820	0.62
163_E	168_Q	0.816	0.61
239_E	267_V	0.816	0.61
415_S	469_N	0.816	0.61
628_V	660_Y	0.814	0.61
377_M	598_N	0.812	0.61
432_H	606_Q	0.810	0.61
377_M	556_S	0.810	0.61
263_V	267_V	0.810	0.61
502_N	505_S	0.809	0.61
176_T	180_Y	0.808	0.61
298_L	303_E	0.808	0.61
510_G	550_Q	0.808	0.61
114_D	117_F	0.807	0.61
375_V	407_F	0.806	0.60
418_K	631_K	0.804	0.60
341_S	383_D	0.801	0.60
160_P	163_E	0.800	0.60
126_Y	337_D	0.799	0.60
436_Y	439_A	0.799	0.60
126_Y	137_A	0.798	0.60
425_G	460_E	0.797	0.60
542_Q	545_T	0.797	0.60
423_L	472_M	0.797	0.60
124_R	128_I	0.793	0.59
497_L	543_Y	0.793	0.59
574_H	585_A	0.793	0.59
411_Y	672_V	0.791	0.59
435_Y	438_D	0.790	0.59
182_R	188_A	0.790	0.59
558_I	668_A	0.789	0.59
534_L	537_D	0.788	0.59
352_K	355_E	0.787	0.59
353_I	693_A	0.787	0.59
464_L	611_M	0.786	0.59
565_V	593_V	0.784	0.58
180_Y	183_F	0.783	0.58
151_A	156_I	0.781	0.58
167_I	170_D	0.779	0.58
425_G	430_I	0.778	0.58
279_K	283_L	0.777	0.58
317_E	324_V	0.776	0.58
168_Q	232_S	0.776	0.58
158_R	287_Y	0.773	0.57
442_L	447_L	0.772	0.57
128_I	132_P	0.772	0.57
167_I	235_S	0.770	0.57
161_D	164_L	0.770	0.57
416_A	557_V	0.770	0.57
693_A	696_E	0.769	0.57
150_Q	153_K	0.768	0.57
602_S	605_K	0.766	0.57
319_N	322_N	0.764	0.56
416_A	551_M	0.761	0.56
351_E	355_E	0.760	0.56
413_M	417_V	0.760	0.56
426_Y	603_D	0.758	0.56
438_D	455_M	0.758	0.56
438_D	441_M	0.756	0.56
614_V	618_G	0.754	0.55
175_E	190_E	0.754	0.55
288_A	302_Y	0.752	0.55
180_Y	184_S	0.750	0.55
194_V	197_M	0.749	0.55
161_D	167_I	0.749	0.55
384_I	568_R	0.744	0.54
272_Q	281_F	0.741	0.54
311_E	321_G	0.740	0.54
127_W	130_A	0.740	0.54
426_Y	607_V	0.740	0.54
421_T	542_Q	0.740	0.54
427_Q	507_F	0.737	0.54
435_Y	459_N	0.737	0.54
352_K	356_E	0.737	0.54
175_E	195_K	0.736	0.54
415_S	631_K	0.735	0.53
304_E	307_N	0.735	0.53
359_R	689_R	0.734	0.53
400_E	403_A	0.731	0.53
288_A	299_E	0.728	0.53
430_I	478_H	0.727	0.53
223_K	231_I	0.724	0.52
358_V	361_S	0.724	0.52
619_T	680_D	0.723	0.52
209_G	213_D	0.723	0.52
175_E	186_G	0.723	0.52
172_E	175_E	0.720	0.52
476_A	503_Y	0.719	0.52
418_K	467_S	0.715	0.51
369_L	379_P	0.714	0.51
164_L	189_Y	0.714	0.51
451_S	468_S	0.713	0.51
229_D	696_E	0.711	0.51
352_K	693_A	0.711	0.51
128_I	131_H	0.708	0.51
656_F	683_N	0.707	0.51
137_A	144_S	0.707	0.51
278_R	281_F	0.706	0.51
143_E	245_D	0.705	0.50
673_V	683_N	0.705	0.50
275_L	285_R	0.705	0.50
189_Y	246_I	0.704	0.50
350_V	354_I	0.704	0.50
158_R	161_D	0.701	0.50
175_E	192_Q	0.700	0.50
431_P	436_Y	0.699	0.50
424_A	507_F	0.698	0.50
158_R	195_K	0.698	0.50
546_Y	551_M	0.697	0.50
553_Q	557_V	0.695	0.49
403_A	676_V	0.694	0.49
612_K	616_S	0.693	0.49
155_Q	160_P	0.692	0.49
419_G	555_I	0.690	0.49
188_A	670_S	0.690	0.49
121_R	125_D	0.686	0.49
470_V	474_N	0.686	0.49
561_G	601_E	0.685	0.48
330_D	334_R	0.684	0.48
222_P	343_D	0.684	0.48
190_E	473_F	0.684	0.48
558_I	610_G	0.682	0.48
436_Y	440_P	0.682	0.48
431_P	435_Y	0.682	0.48
241_L	247_V	0.681	0.48
345_E	572_S	0.681	0.48
439_A	442_L	0.680	0.48
191_P	195_K	0.677	0.48
124_R	137_A	0.676	0.48
212_L	250_W	0.675	0.47
305_Y	310_K	0.674	0.47
251_T	257_D	0.674	0.47
162_Q	199_P	0.673	0.47
464_L	628_V	0.671	0.47
446_N	536_L	0.670	0.47
146_L	152_Y	0.669	0.47
416_A	655_T	0.669	0.47
291_D	573_I	0.667	0.47
312_K	323_V	0.667	0.47
193_I	196_A	0.666	0.47
182_R	218_S	0.666	0.47
312_K	315_Y	0.665	0.46
289_N	296_S	0.663	0.46
189_Y	192_Q	0.662	0.46
278_R	285_R	0.660	0.46
660_Y	695_A	0.660	0.46
160_P	166_A	0.659	0.46
293_V	303_E	0.658	0.46
412_E	417_V	0.658	0.46
472_M	475_V	0.658	0.46
679_D	684_K	0.658	0.46
387_M	569_I	0.657	0.46
354_I	361_S	0.657	0.46
679_D	683_N	0.655	0.45
533_G	536_L	0.654	0.45
320_K	324_V	0.654	0.45
379_P	559_A	0.653	0.45
378_D	560_N	0.652	0.45
212_L	235_S	0.651	0.45
288_A	291_D	0.650	0.45
248_N	252_R	0.649	0.45
623_T	626_E	0.649	0.45
144_S	252_R	0.646	0.45
219_S	228_Y	0.644	0.44
118_L	209_G	0.644	0.44
505_S	510_G	0.644	0.44
338_L	348_A	0.643	0.44
299_E	303_E	0.643	0.44
149_D	596_K	0.642	0.44
190_E	195_K	0.642	0.44
503_Y	506_Q	0.641	0.44
317_E	323_V	0.641	0.44
381_N	385_L	0.641	0.44
268_T	473_F	0.640	0.44
357_E	689_R	0.639	0.44
297_Y	303_E	0.637	0.44
115_T	118_L	0.636	0.44
160_P	232_S	0.634	0.43
635_A	653_N	0.634	0.43
313_V	317_E	0.634	0.43
135_A	138_L	0.632	0.43
313_V	323_V	0.631	0.43
325_S	330_D	0.631	0.43
175_E	673_V	0.630	0.43
626_E	692_H	0.630	0.43
159_V	163_E	0.630	0.43
312_K	317_E	0.629	0.43
189_Y	196_A	0.629	0.43
189_Y	197_M	0.626	0.43
263_V	588_H	0.625	0.42
476_A	536_L	0.625	0.42
616_S	624_F	0.624	0.42
411_Y	674_P	0.624	0.42
669_F	690_A	0.624	0.42
356_E	689_R	0.623	0.42
446_N	473_F	0.623	0.42
190_E	249_D	0.622	0.42
584_K	592_K	0.621	0.42
195_K	203_N	0.620	0.42
158_R	167_I	0.620	0.42
501_R	505_S	0.619	0.42
163_E	189_Y	0.619	0.42
293_V	304_E	0.619	0.42
634_T	637_T	0.618	0.42
630_G	658_G	0.618	0.42
354_I	358_V	0.616	0.42
151_A	233_I	0.615	0.41
356_E	696_E	0.615	0.41
436_Y	471_Y	0.615	0.41
696_E	699_K	0.614	0.41
196_A	199_P	0.614	0.41
518_P	600_S	0.614	0.41
658_G	671_V	0.613	0.41
461_L	606_Q	0.612	0.41
432_H	436_Y	0.612	0.41
555_I	668_A	0.612	0.41
178_A	182_R	0.612	0.41
556_S	668_A	0.611	0.41
473_F	536_L	0.611	0.41
193_I	655_T	0.611	0.41
347_Q	387_M	0.611	0.41
189_Y	235_S	0.611	0.41
275_L	279_K	0.609	0.41
176_T	179_I	0.608	0.41
287_Y	295_K	0.607	0.41
291_D	298_L	0.607	0.41
148_G	265_G	0.606	0.41
548_P	655_T	0.606	0.41
163_E	191_P	0.606	0.41
195_K	211_L	0.605	0.41
413_M	543_Y	0.605	0.41
402_Y	509_L	0.604	0.40
439_A	679_D	0.604	0.40
163_E	178_A	0.603	0.40
479_I	500_M	0.603	0.40
415_S	467_S	0.603	0.40
476_A	539_A	0.603	0.40
228_Y	232_S	0.602	0.40
194_V	228_Y	0.600	0.40
191_P	246_I	0.599	0.40
160_P	167_I	0.599	0.40
326_Q	329_I	0.598	0.40
195_K	198_N	0.596	0.40
296_S	300_Y	0.595	0.40
129_A	344_M	0.595	0.40
630_G	684_K	0.595	0.40
167_I	177_A	0.593	0.39
420_A	507_F	0.593	0.39
401_D	406_A	0.593	0.39
258_K	296_S	0.593	0.39
215_K	237_H	0.592	0.39
304_E	309_H	0.592	0.39
555_I	632_T	0.591	0.39
449_K	452_Y	0.591	0.39
126_Y	130_A	0.591	0.39
197_M	539_A	0.590	0.39
163_E	190_E	0.588	0.39
122_D	582_L	0.588	0.39
276_S	444_G	0.588	0.39
178_A	190_E	0.587	0.39
133_K	296_S	0.587	0.39
252_R	311_E	0.587	0.39
691_I	695_A	0.586	0.39
162_Q	165_K	0.586	0.39
423_L	558_I	0.586	0.39
222_P	475_V	0.586	0.39
177_A	338_L	0.586	0.39
163_E	196_A	0.583	0.38
217_N	404_I	0.582	0.38
509_L	546_Y	0.582	0.38
179_I	183_F	0.582	0.38
283_L	286_G	0.581	0.38
215_K	219_S	0.580	0.38
337_D	572_S	0.580	0.38
232_S	236_E	0.580	0.38
274_L	277_D	0.579	0.38
614_V	656_F	0.579	0.38
387_M	404_I	0.579	0.38
196_A	212_L	0.579	0.38
311_E	314_E	0.579	0.38
292_R	297_Y	0.579	0.38
634_T	654_L	0.578	0.38
603_D	606_Q	0.578	0.38
141_E	342_F	0.578	0.38
348_A	351_E	0.577	0.38
156_I	159_V	0.576	0.38
191_P	235_S	0.576	0.38
262_S	268_T	0.576	0.38
680_D	684_K	0.576	0.38
243_G	403_A	0.576	0.38
241_L	254_Y	0.576	0.38
350_V	353_I	0.575	0.38
603_D	607_V	0.573	0.37
117_F	146_L	0.573	0.37
450_K	468_S	0.573	0.37
124_R	134_K	0.573	0.37
556_S	694_Y	0.573	0.37
385_L	388_A	0.572	0.37
140_K	143_E	0.572	0.37
190_E	216_K	0.572	0.37
174_M	179_I	0.571	0.37
556_S	565_V	0.571	0.37
191_P	199_P	0.571	0.37
137_A	142_S	0.570	0.37
211_L	215_K	0.570	0.37
116_E	611_M	0.569	0.37
426_Y	610_G	0.569	0.37
130_A	133_K	0.569	0.37
341_S	571_T	0.569	0.37
629_S	661_P	0.568	0.37
570_V	587_E	0.568	0.37
265_G	393_D	0.567	0.37
300_Y	303_E	0.566	0.37
553_Q	668_A	0.566	0.37
620_A	684_K	0.566	0.37
227_T	406_A	0.565	0.37
163_E	235_S	0.565	0.37
137_A	148_G	0.564	0.37
125_D	338_L	0.564	0.37
418_K	632_T	0.564	0.37
353_I	359_R	0.564	0.37
560_N	565_V	0.563	0.37
350_V	573_I	0.562	0.36
440_P	447_L	0.562	0.36
302_Y	338_L	0.562	0.36
380_N	560_N	0.561	0.36
246_I	270_P	0.561	0.36
352_K	584_K	0.561	0.36
265_G	429_G	0.560	0.36
301_Q	558_I	0.558	0.36
625_T	692_H	0.558	0.36
136_A	142_S	0.558	0.36
223_K	611_M	0.557	0.36
237_H	240_E	0.555	0.36
229_D	322_N	0.554	0.36
428_D	479_I	0.553	0.36
613_L	616_S	0.552	0.35
152_Y	260_L	0.551	0.35
269_T	273_G	0.551	0.35
164_L	195_K	0.551	0.35
430_I	479_I	0.551	0.35
160_P	164_L	0.549	0.35
164_L	212_L	0.549	0.35
611_M	689_R	0.547	0.35
328_T	666_K	0.546	0.35
291_D	297_Y	0.546	0.35
199_P	211_L	0.546	0.35
144_S	147_K	0.546	0.35
653_N	675_S	0.545	0.35
290_N	293_V	0.545	0.35
296_S	303_E	0.544	0.35
422_V	610_G	0.543	0.35
375_V	552_A	0.542	0.35
191_P	212_L	0.542	0.35
145_N	233_I	0.541	0.34
437_I	440_P	0.540	0.34
189_Y	255_P	0.540	0.34
177_A	196_A	0.537	0.34
305_Y	309_H	0.536	0.34
143_E	198_N	0.536	0.34
588_H	592_K	0.536	0.34
307_N	310_K	0.535	0.34
507_F	668_A	0.535	0.34
190_E	207_K	0.535	0.34
417_V	459_N	0.535	0.34
615_T	620_A	0.534	0.34
194_V	223_K	0.534	0.34
193_I	197_M	0.534	0.34
350_V	504_Y	0.534	0.34
574_H	580_D	0.534	0.34
189_Y	212_L	0.534	0.34
654_L	671_V	0.533	0.34
415_S	632_T	0.531	0.34
566_Q	596_K	0.531	0.34
400_E	406_A	0.530	0.33
147_K	151_A	0.529	0.33
335_G	661_P	0.529	0.33
291_D	294_G	0.529	0.33
175_E	183_F	0.529	0.33
160_P	170_D	0.528	0.33
124_R	136_A	0.526	0.33
373_F	379_P	0.526	0.33
129_A	135_A	0.526	0.33
155_Q	264_F	0.526	0.33
163_E	246_I	0.526	0.33
243_G	445_T	0.525	0.33
631_K	634_T	0.524	0.33
324_V	614_V	0.523	0.33
371_R	390_K	0.523	0.33
452_Y	678_D	0.523	0.33
669_F	694_Y	0.523	0.33
425_G	480_A	0.523	0.33
412_E	456_G	0.522	0.33
385_L	590_K	0.522	0.33
421_T	475_V	0.522	0.33
244_I	249_D	0.521	0.33
377_M	567_P	0.521	0.33
212_L	237_H	0.521	0.33
260_L	570_V	0.519	0.33
369_L	375_V	0.517	0.32
685_I	690_A	0.517	0.32
203_N	215_K	0.517	0.32
455_M	462_T	0.517	0.32
326_Q	330_D	0.517	0.32
381_N	565_V	0.517	0.32
319_N	569_I	0.516	0.32
457_T	685_I	0.515	0.32
558_I	568_R	0.515	0.32
421_T	543_Y	0.514	0.32
673_V	680_D	0.512	0.32
420_A	683_N	0.512	0.32
186_G	190_E	0.512	0.32
431_P	434_K	0.511	0.32
191_P	194_V	0.510	0.32
380_N	666_K	0.510	0.32
196_A	235_S	0.509	0.32
167_I	178_A	0.508	0.32
669_F	691_I	0.508	0.32
164_L	235_S	0.507	0.31
499_K	503_Y	0.507	0.31
374_A	669_F	0.507	0.31
209_G	258_K	0.506	0.31
372_A	384_I	0.506	0.31
424_A	504_Y	0.506	0.31
378_D	571_T	0.505	0.31
467_S	632_T	0.505	0.31
172_E	179_I	0.504	0.31
478_H	670_S	0.504	0.31
248_N	660_Y	0.503	0.31
306_L	512_K	0.503	0.31
125_D	128_I	0.503	0.31
610_G	677_D	0.502	0.31
315_Y	324_V	0.502	0.31
504_Y	509_L	0.502	0.31
480_A	499_K	0.501	0.31
318_D	323_V	0.501	0.31
240_E	245_D	0.501	0.31
191_P	196_A	0.501	0.31
350_V	386_S	0.500	0.31

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2wadA	1	0.831	100	0.391	Contact Map
4oonA	1	0.4872	100	0.41	Contact Map
3udfA	2	0.6506	100	0.416	Contact Map
3vmaA	1	0.8352	100	0.419	Contact Map
3vskA	2	0.8651	100	0.42	Contact Map
2jchA	1	0.483	100	0.441	Contact Map
2olvA	1	0.7514	100	0.443	Contact Map
4ye5A	1	0.7443	100	0.457	Contact Map
4ovdA	2	0.5781	100	0.461	Contact Map
3equA	1	0.5881	100	0.467	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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