ALST - BACSU - GREMLIN Contacts

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ALST - Amino-acid carrier protein AlsT

UniProt:	Q45068	Sequences: MESFFNSLINIPSDFIWKYLFYILIGLGLFFTIRFGFIQFRYFIEMFRIVGEKPEGNKGVSSMQAFFISAASRVGTGNLTGVALAIATGGPGAVFWMWVVAAVGMASSFVESTLAQLYKVRDGEDFRGGPAYYIQKGLGARWLGIVFAILITVSFGLIFNAVQTNTIAGALDGAFHVNKIVVAIVLAVLTAFIIFGGLKRVVAVSQLIVPVMAGIYILIALFVVITNITAFPGVIATIVKNALGFEQVVGGGIGGIIVIGAQRGLFSNEAGMGSAPNAAATAHVSHPAKQGFIQTLGVFFDTFIICTSTAFIILLYSVTPKGDGIQVTQAALNHHIGGWAPTFIAVAMFLFAFSSVVGNYYYGETNIEFIKTSKTWLNIYRIAVIAMVVYGSLSGFQIVWDMADLFMGIMALINLIVIALLSNVAYKVYKDYAKQRKQGLDPVFKAKNIPGLKNAETWEDEKQEA	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	465 (432)
Sequences:	3767 (2329)
Seq/√Len:	112.0

ECOLI - YAAJ
BACSU - ALST GLNT YRBD YFLA

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
94_V	310_A	4.691	1.00
117_L	428_V	4.094	1.00
220_A	308_S	3.537	1.00
134_I	417_V	3.348	1.00
110_V	425_A	3.313	1.00
228_I	231_F	3.203	1.00
120_V	136_K	3.068	1.00
138_L	420_L	2.958	1.00
307_T	311_F	2.939	1.00
236_A	240_K	2.923	1.00
109_F	429_Y	2.916	1.00
222_F	226_T	2.759	1.00
40_F	102_A	2.705	1.00
235_I	239_V	2.680	1.00
230_A	233_G	2.670	1.00
205_S	354_S	2.584	1.00
34_R	426_Y	2.576	1.00
27_L	419_A	2.509	1.00
204_V	208_I	2.482	1.00
363_G	380_Y	2.415	1.00
10_N	14_D	2.398	1.00
237_T	241_N	2.397	1.00
146_V	150_L	2.329	1.00
187_A	385_I	2.301	1.00
6_N	401_D	2.271	1.00
214_G	218_L	2.239	1.00
11_I	15_F	2.195	1.00
118_Y	424_V	2.187	1.00
27_L	415_L	2.143	1.00
174_A	345_A	2.135	1.00
29_L	103_V	2.083	1.00
200_R	203_A	2.071	1.00
151_I	366_N	2.067	1.00
135_Q	369_F	2.059	1.00
244_G	247_Q	2.058	1.00
134_I	144_G	2.056	1.00
233_G	236_A	2.051	1.00
191_A	385_I	2.035	1.00
13_S	405_L	1.996	1.00
286_H	431_D	1.975	1.00
34_R	423_N	1.952	1.00
135_Q	141_R	1.946	1.00
9_I	405_L	1.932	1.00
78_N	301_D	1.932	1.00
234_V	314_L	1.910	1.00
44_I	48_R	1.892	1.00
45_E	48_R	1.890	1.00
30_F	422_S	1.883	1.00
184_I	188_V	1.877	1.00
9_I	401_D	1.874	1.00
252_G	255_G	1.873	1.00
378_N	381_R	1.865	1.00
94_V	238_I	1.858	1.00
397_Q	401_D	1.835	1.00
225_I	228_I	1.795	1.00
286_H	435_Q	1.794	1.00
145_I	370_I	1.789	1.00
189_L	349_F	1.778	1.00
187_A	389_V	1.756	1.00
299_F	303_F	1.754	1.00
412_L	416_I	1.723	1.00
122_D	125_D	1.722	1.00
364_E	381_R	1.698	1.00
180_I	389_V	1.695	1.00
285_S	289_K	1.679	1.00
208_I	350_L	1.669	1.00
288_A	428_V	1.666	1.00
258_V	262_Q	1.660	1.00
236_A	239_V	1.656	1.00
8_L	12_P	1.655	1.00
86_I	94_V	1.642	1.00
150_L	409_I	1.640	1.00
257_I	261_A	1.638	1.00
45_E	432_Y	1.637	1.00
32_T	39_Q	1.632	1.00
234_V	311_F	1.613	1.00
80_T	324_G	1.613	1.00
64_Q	202_V	1.594	1.00
259_I	262_Q	1.584	1.00
249_V	252_G	1.579	1.00
36_G	430_K	1.573	1.00
41_R	433_A	1.560	1.00
333_N	341_P	1.530	1.00
17_W	408_G	1.529	1.00
88_T	259_I	1.523	1.00
194_I	360_Y	1.506	1.00
178_N	181_V	1.500	1.00
218_L	222_F	1.494	1.00
423_N	427_K	1.485	1.00
191_A	195_F	1.483	1.00
428_V	431_D	1.482	1.00
231_F	234_V	1.469	1.00
226_T	229_T	1.469	1.00
7_S	10_N	1.466	1.00
24_L	265_L	1.466	1.00
367_I	371_K	1.458	1.00
115_A	280_A	1.448	1.00
135_Q	145_I	1.440	1.00
226_T	335_H	1.438	1.00
147_F	410_M	1.432	1.00
220_A	312_I	1.423	1.00
431_D	435_Q	1.420	1.00
224_V	315_L	1.415	1.00
224_V	231_F	1.414	1.00
45_E	49_I	1.413	1.00
64_Q	206_Q	1.411	1.00
67_F	205_S	1.409	1.00
74_V	305_I	1.408	1.00
279_A	294_Q	1.388	1.00
224_V	311_F	1.386	1.00
117_L	424_V	1.384	1.00
181_V	185_V	1.383	1.00
32_T	37_F	1.382	1.00
105_M	299_F	1.381	1.00
241_N	245_F	1.377	1.00
183_A	392_S	1.370	1.00
23_I	419_A	1.363	1.00
34_R	422_S	1.362	1.00
378_N	382_I	1.358	1.00
35_F	38_I	1.358	1.00
12_P	405_L	1.351	1.00
167_I	186_L	1.345	1.00
145_I	149_I	1.341	1.00
382_I	386_A	1.338	1.00
19_Y	22_Y	1.338	1.00
168_A	182_V	1.332	1.00
434_K	438_Q	1.330	1.00
98_W	307_T	1.330	1.00
234_V	315_L	1.322	1.00
177_V	182_V	1.313	1.00
62_S	284_V	1.310	1.00
426_Y	430_K	1.309	0.99
237_T	314_L	1.305	0.99
76_T	348_M	1.305	0.99
250_G	254_G	1.287	0.99
36_G	433_A	1.282	0.99
232_P	236_A	1.277	0.99
402_M	406_F	1.276	0.99
9_I	398_I	1.276	0.99
30_F	34_R	1.273	0.99
203_A	206_Q	1.267	0.99
162_V	403_A	1.267	0.99
134_I	143_L	1.263	0.99
225_I	229_T	1.257	0.99
147_F	276_P	1.240	0.99
180_I	184_I	1.239	0.99
141_R	144_G	1.213	0.99
281_T	361_Y	1.212	0.99
224_V	228_I	1.207	0.99
63_M	67_F	1.206	0.99
102_A	303_F	1.206	0.99
79_L	325_I	1.201	0.99
61_S	64_Q	1.199	0.99
272_M	411_A	1.198	0.99
424_V	427_K	1.194	0.99
6_N	10_N	1.193	0.99
389_V	393_L	1.190	0.99
39_Q	106_A	1.187	0.99
43_F	47_F	1.186	0.99
229_T	232_P	1.186	0.99
121_R	126_F	1.184	0.99
204_V	357_V	1.182	0.99
152_T	155_F	1.182	0.99
66_F	300_F	1.177	0.99
183_A	389_V	1.173	0.99
221_L	225_I	1.168	0.99
139_G	142_W	1.167	0.99
178_N	182_V	1.159	0.99
108_S	112_S	1.155	0.99
189_L	353_F	1.153	0.99
12_P	15_F	1.152	0.99
37_F	40_F	1.152	0.99
203_A	207_L	1.151	0.99
356_V	388_V	1.148	0.99
316_Y	335_H	1.146	0.99
42_Y	433_A	1.143	0.99
164_T	392_S	1.141	0.99
278_A	362_Y	1.137	0.99
137_G	421_L	1.135	0.99
122_D	127_R	1.130	0.99
237_T	240_K	1.129	0.98
138_L	142_W	1.112	0.98
316_Y	331_A	1.111	0.98
240_K	246_E	1.111	0.98
30_F	426_Y	1.106	0.98
222_F	336_I	1.106	0.98
22_Y	26_G	1.105	0.98
371_K	376_W	1.105	0.98
23_I	412_L	1.104	0.98
142_W	146_V	1.100	0.98
7_S	11_I	1.097	0.98
31_F	110_V	1.096	0.98
241_N	244_G	1.095	0.98
318_V	330_A	1.094	0.98
217_I	221_L	1.090	0.98
231_F	235_I	1.088	0.98
367_I	376_W	1.088	0.98
227_N	315_L	1.086	0.98
330_A	333_N	1.084	0.98
330_A	334_H	1.084	0.98
112_S	294_Q	1.081	0.98
133_Y	417_V	1.080	0.98
11_I	14_D	1.080	0.98
172_D	179_K	1.080	0.98
313_I	328_T	1.074	0.98
43_F	299_F	1.073	0.98
113_T	288_A	1.073	0.98
42_Y	292_F	1.073	0.98
188_V	192_F	1.056	0.98
80_T	166_T	1.052	0.98
190_T	353_F	1.050	0.98
8_L	11_I	1.047	0.98
227_N	230_A	1.046	0.98
342_T	346_V	1.046	0.98
109_F	113_T	1.046	0.98
113_T	291_G	1.043	0.97
309_T	328_T	1.042	0.97
109_F	288_A	1.040	0.97
100_V	261_A	1.035	0.97
72_S	358_G	1.030	0.97
25_I	100_V	1.029	0.97
68_I	198_L	1.028	0.97
217_I	308_S	1.027	0.97
326_Q	330_A	1.026	0.97
87_A	327_V	1.017	0.97
247_Q	250_G	1.009	0.97
343_F	347_A	1.008	0.97
169_G	326_Q	1.007	0.97
296_L	300_F	1.004	0.97
159_F	359_N	1.004	0.97
50_V	293_I	1.003	0.97
313_I	327_V	1.002	0.97
196_G	200_R	0.995	0.97
228_I	232_P	0.995	0.97
430_K	434_K	0.993	0.97
181_V	184_I	0.993	0.97
83_A	328_T	0.990	0.97
251_G	255_G	0.987	0.96
223_V	335_H	0.986	0.96
62_S	293_I	0.985	0.96
42_Y	45_E	0.984	0.96
249_V	253_I	0.980	0.96
152_T	367_I	0.973	0.96
105_M	303_F	0.971	0.96
386_A	390_Y	0.971	0.96
208_I	354_S	0.969	0.96
233_G	237_T	0.969	0.96
310_A	314_L	0.963	0.96
411_A	415_L	0.960	0.96
64_Q	203_A	0.956	0.96
211_V	215_I	0.954	0.96
390_Y	394_S	0.953	0.96
336_I	339_W	0.947	0.96
83_A	313_I	0.947	0.96
166_T	348_M	0.945	0.95
429_Y	433_A	0.942	0.95
46_M	296_L	0.935	0.95
127_R	365_T	0.934	0.95
35_F	426_Y	0.933	0.95
45_E	436_R	0.932	0.95
98_W	235_I	0.931	0.95
248_V	251_G	0.930	0.95
269_E	274_S	0.927	0.95
155_F	274_S	0.927	0.95
86_I	314_L	0.926	0.95
47_F	296_L	0.924	0.95
230_A	315_L	0.924	0.95
223_V	332_L	0.918	0.95
20_L	408_G	0.918	0.95
165_N	400_W	0.915	0.95
130_P	276_P	0.909	0.94
120_V	135_Q	0.908	0.94
151_I	410_M	0.906	0.94
248_V	252_G	0.905	0.94
86_I	310_A	0.905	0.94
25_I	265_L	0.905	0.94
46_M	295_T	0.899	0.94
82_V	306_C	0.899	0.94
377_L	381_R	0.898	0.94
267_S	301_D	0.894	0.94
199_K	203_A	0.894	0.94
270_A	298_V	0.891	0.94
305_I	308_S	0.890	0.94
175_F	342_T	0.889	0.94
190_T	356_V	0.888	0.94
141_R	145_I	0.884	0.94
315_L	335_H	0.881	0.93
169_G	172_D	0.875	0.93
224_V	234_V	0.874	0.93
70_A	74_V	0.873	0.93
105_M	295_T	0.869	0.93
333_N	337_G	0.869	0.93
86_I	313_I	0.867	0.93
134_I	142_W	0.866	0.93
246_E	252_G	0.866	0.93
112_S	297_G	0.864	0.93
59_G	283_H	0.864	0.93
159_F	272_M	0.863	0.93
419_A	422_S	0.863	0.93
424_V	428_V	0.862	0.93
80_T	83_A	0.861	0.93
222_F	225_I	0.853	0.92
173_G	326_Q	0.852	0.92
323_D	326_Q	0.852	0.92
21_F	25_I	0.852	0.92
285_S	432_Y	0.850	0.92
31_F	418_I	0.844	0.92
91_P	237_T	0.843	0.92
193_I	204_V	0.842	0.92
88_T	253_I	0.841	0.92
73_R	108_S	0.840	0.92
143_L	417_V	0.839	0.92
420_L	423_N	0.838	0.92
126_F	283_H	0.837	0.92
153_V	406_F	0.836	0.92
60_V	202_V	0.836	0.92
95_F	243_L	0.835	0.92
338_G	341_P	0.834	0.91
215_I	347_A	0.832	0.91
23_I	27_L	0.832	0.91
79_L	344_I	0.828	0.91
340_A	344_I	0.827	0.91
171_L	349_F	0.826	0.91
110_V	426_Y	0.825	0.91
299_F	304_I	0.824	0.91
422_S	426_Y	0.822	0.91
10_N	401_D	0.822	0.91
49_I	293_I	0.822	0.91
383_A	386_A	0.815	0.91
401_D	405_L	0.814	0.90
223_V	312_I	0.813	0.90
84_L	259_I	0.813	0.90
237_T	319_T	0.811	0.90
95_F	99_V	0.810	0.90
143_L	146_V	0.806	0.90
120_V	127_R	0.806	0.90
235_I	311_F	0.805	0.90
209_V	212_M	0.804	0.90
116_Q	119_K	0.804	0.90
34_R	37_F	0.798	0.90
365_T	368_E	0.797	0.90
303_F	307_T	0.796	0.89
190_T	388_V	0.793	0.89
201_V	361_Y	0.793	0.89
219_I	347_A	0.792	0.89
110_V	113_T	0.792	0.89
308_S	312_I	0.791	0.89
161_A	394_S	0.791	0.89
284_V	289_K	0.788	0.89
170_A	329_Q	0.787	0.89
235_I	307_T	0.785	0.89
276_P	280_A	0.785	0.89
155_F	380_Y	0.785	0.89
150_L	413_I	0.782	0.89
130_P	133_Y	0.782	0.89
164_T	356_V	0.782	0.89
74_V	213_A	0.781	0.89
180_I	393_L	0.780	0.88
267_S	302_T	0.774	0.88
159_F	407_M	0.771	0.88
166_T	325_I	0.770	0.88
229_T	233_G	0.769	0.88
28_G	104_G	0.768	0.88
46_M	292_F	0.766	0.88
20_L	411_A	0.766	0.88
66_F	293_I	0.762	0.87
387_M	390_Y	0.760	0.87
171_L	182_V	0.759	0.87
207_L	211_V	0.759	0.87
128_G	280_A	0.757	0.87
28_G	103_V	0.757	0.87
26_G	419_A	0.757	0.87
32_T	40_F	0.756	0.87
78_N	267_S	0.756	0.87
172_D	182_V	0.755	0.87
289_K	432_Y	0.754	0.87
294_Q	297_G	0.753	0.87
183_A	393_L	0.752	0.87
142_W	145_I	0.752	0.87
231_F	311_F	0.752	0.87
86_I	319_T	0.750	0.86
198_L	361_Y	0.744	0.86
425_A	429_Y	0.742	0.86
38_I	429_Y	0.742	0.86
108_S	275_A	0.742	0.86
219_I	336_I	0.740	0.86
376_W	379_I	0.739	0.86
342_T	345_A	0.735	0.85
73_R	294_Q	0.735	0.85
238_I	310_A	0.734	0.85
170_A	325_I	0.734	0.85
6_N	398_I	0.733	0.85
423_N	430_K	0.732	0.85
160_N	403_A	0.731	0.85
241_N	246_E	0.731	0.85
245_F	248_V	0.728	0.85
38_I	42_Y	0.720	0.84
162_V	400_W	0.715	0.84
35_F	429_Y	0.714	0.84
198_L	201_V	0.714	0.84
195_F	378_N	0.714	0.84
339_W	342_T	0.712	0.84
84_L	87_A	0.710	0.83
219_I	343_F	0.708	0.83
67_F	206_Q	0.705	0.83
209_V	213_A	0.704	0.83
213_A	305_I	0.704	0.83
293_I	297_G	0.703	0.83
256_I	259_I	0.700	0.82
169_G	173_G	0.697	0.82
6_N	397_Q	0.695	0.82
359_N	407_M	0.693	0.82
226_T	230_A	0.691	0.82
430_K	433_A	0.691	0.82
212_M	267_S	0.689	0.81
317_S	320_P	0.688	0.81
279_A	297_G	0.688	0.81
50_V	296_L	0.686	0.81
16_I	412_L	0.686	0.81
79_L	351_F	0.686	0.81
104_G	107_S	0.684	0.81
21_F	265_L	0.683	0.81
159_F	403_A	0.683	0.81
15_F	19_Y	0.680	0.81
72_S	359_N	0.679	0.81
155_F	359_N	0.678	0.80
227_N	335_H	0.678	0.80
48_R	51_G	0.676	0.80
57_N	121_R	0.673	0.80
286_H	432_Y	0.673	0.80
35_F	110_V	0.672	0.80
394_S	399_V	0.672	0.80
379_I	382_I	0.668	0.79
316_Y	321_K	0.667	0.79
49_I	432_Y	0.666	0.79
112_S	279_A	0.665	0.79
71_A	298_V	0.665	0.79
241_N	256_I	0.665	0.79
68_I	358_G	0.664	0.79
122_D	365_T	0.663	0.79
374_K	378_N	0.661	0.79
49_I	289_K	0.660	0.79
217_I	220_A	0.659	0.79
240_K	244_G	0.659	0.79
329_Q	333_N	0.657	0.78
325_I	348_M	0.655	0.78
76_T	352_A	0.654	0.78
74_V	300_F	0.654	0.78
160_N	384_V	0.653	0.78
267_S	303_F	0.652	0.78
274_S	359_N	0.651	0.78
36_G	44_I	0.650	0.78
31_F	422_S	0.646	0.77
420_L	424_V	0.642	0.77
333_N	338_G	0.642	0.77
59_G	126_F	0.641	0.77
344_I	347_A	0.641	0.77
110_V	429_Y	0.640	0.77
187_A	191_A	0.639	0.76
423_N	426_Y	0.639	0.76
167_I	352_A	0.639	0.76
131_A	366_N	0.638	0.76
151_I	155_F	0.638	0.76
159_F	411_A	0.636	0.76
38_I	106_A	0.634	0.76
172_D	176_H	0.634	0.76
240_K	245_F	0.631	0.75
245_F	249_V	0.630	0.75
76_T	166_T	0.629	0.75
300_F	304_I	0.629	0.75
179_K	182_V	0.628	0.75
216_Y	220_A	0.628	0.75
230_A	234_V	0.628	0.75
94_V	98_W	0.627	0.75
8_L	15_F	0.627	0.75
244_G	252_G	0.627	0.75
311_F	315_L	0.626	0.75
161_A	164_T	0.626	0.75
239_V	314_L	0.625	0.75
145_I	148_A	0.623	0.75
123_G	373_S	0.623	0.75
272_M	407_M	0.621	0.74
109_F	425_A	0.620	0.74
37_F	102_A	0.619	0.74
72_S	272_M	0.619	0.74
66_F	297_G	0.619	0.74
115_A	276_P	0.619	0.74
87_A	322_G	0.618	0.74
16_I	408_G	0.617	0.74
160_N	359_N	0.616	0.74
80_T	323_D	0.615	0.74
60_V	281_T	0.615	0.74
280_A	381_R	0.614	0.74
27_L	31_F	0.613	0.73
345_A	349_F	0.612	0.73
127_R	368_E	0.610	0.73
113_T	425_A	0.609	0.73
31_F	425_A	0.606	0.73
215_I	346_V	0.606	0.73
423_N	428_V	0.605	0.72
157_L	383_A	0.603	0.72
20_L	412_L	0.601	0.72
155_F	159_F	0.600	0.72
221_L	224_V	0.600	0.72
416_I	420_L	0.600	0.72
288_A	425_A	0.598	0.72
101_A	302_T	0.598	0.72
238_I	314_L	0.597	0.71
183_A	187_A	0.596	0.71
189_L	192_F	0.592	0.71
215_I	219_I	0.592	0.71
160_N	380_Y	0.590	0.71
113_T	428_V	0.589	0.70
223_V	316_Y	0.589	0.70
117_L	427_K	0.589	0.70
171_L	175_F	0.588	0.70
145_I	369_F	0.586	0.70
390_Y	393_L	0.586	0.70
182_V	186_L	0.584	0.70
98_W	239_V	0.584	0.70
87_A	323_D	0.583	0.70
146_V	149_I	0.583	0.70
130_P	277_N	0.582	0.70
175_F	182_V	0.582	0.70
36_G	423_N	0.581	0.69
161_A	399_V	0.580	0.69
99_V	239_V	0.580	0.69
60_V	68_I	0.579	0.69
169_G	179_K	0.579	0.69
328_T	331_A	0.579	0.69
133_Y	414_N	0.578	0.69
318_V	327_V	0.577	0.69
16_I	411_A	0.577	0.69
84_L	396_F	0.575	0.69
122_D	373_S	0.573	0.68
228_I	233_G	0.572	0.68
62_S	282_A	0.571	0.68
9_I	13_S	0.570	0.68
417_V	420_L	0.568	0.68
50_V	300_F	0.567	0.68
176_H	179_K	0.567	0.68
279_A	290_Q	0.566	0.67
113_T	429_Y	0.566	0.67
255_G	258_V	0.566	0.67
386_A	389_V	0.565	0.67
40_F	44_I	0.565	0.67
108_S	119_K	0.565	0.67
190_T	194_I	0.564	0.67
100_V	265_L	0.563	0.67
23_I	416_I	0.563	0.67
46_M	50_V	0.562	0.67
73_R	279_A	0.561	0.67
182_V	185_V	0.561	0.67
318_V	321_K	0.561	0.67
368_E	373_S	0.560	0.67
153_V	158_I	0.560	0.67
95_F	239_V	0.560	0.67
217_I	304_I	0.560	0.67
380_Y	384_V	0.560	0.67
312_I	332_L	0.558	0.66
356_V	384_V	0.557	0.66
97_M	302_T	0.557	0.66
198_L	202_V	0.557	0.66
58_K	283_H	0.556	0.66
246_E	249_V	0.555	0.66
431_D	434_K	0.555	0.66
84_L	400_W	0.554	0.66
48_R	52_E	0.554	0.66
131_A	277_N	0.553	0.66
58_K	284_V	0.552	0.65
275_A	362_Y	0.552	0.65
78_N	93_A	0.551	0.65
232_P	235_I	0.551	0.65
230_A	237_T	0.551	0.65
154_S	407_M	0.551	0.65
194_I	381_R	0.550	0.65
101_A	104_G	0.549	0.65
137_G	140_A	0.548	0.65
268_N	302_T	0.547	0.65
115_A	275_A	0.545	0.65
185_V	188_V	0.545	0.65
162_V	399_V	0.544	0.64
166_T	324_G	0.541	0.64
76_T	167_I	0.541	0.64
38_I	292_F	0.540	0.64
367_I	379_I	0.540	0.64
162_V	166_T	0.539	0.64
110_V	418_I	0.538	0.64
107_S	275_A	0.536	0.63
161_A	165_N	0.536	0.63
94_V	307_T	0.536	0.63
134_I	140_A	0.536	0.63
435_Q	438_Q	0.534	0.63
84_L	324_G	0.533	0.63
107_S	268_N	0.532	0.63
93_A	254_G	0.532	0.63
40_F	43_F	0.531	0.63
16_I	405_L	0.530	0.62
110_V	422_S	0.530	0.62
348_M	355_S	0.529	0.62
205_S	278_A	0.527	0.62
292_F	433_A	0.526	0.62
16_I	19_Y	0.526	0.62
125_D	199_K	0.525	0.62
42_Y	437_K	0.525	0.62
193_I	353_F	0.524	0.61
148_A	370_I	0.523	0.61
434_K	437_K	0.522	0.61
134_I	413_I	0.522	0.61
355_S	359_N	0.522	0.61
174_A	341_P	0.520	0.61
348_M	352_A	0.519	0.61
157_L	384_V	0.519	0.61
433_A	437_K	0.519	0.61
88_T	258_V	0.518	0.61
258_V	405_L	0.518	0.61
361_Y	380_Y	0.518	0.61
73_R	112_S	0.518	0.61
266_F	403_A	0.517	0.60
169_G	324_G	0.517	0.60
38_I	43_F	0.514	0.60
219_I	349_F	0.514	0.60
82_V	267_S	0.514	0.60
92_G	242_A	0.513	0.60
138_L	417_V	0.512	0.60
108_S	297_G	0.512	0.60
244_G	248_V	0.511	0.60
66_F	70_A	0.510	0.59
140_A	420_L	0.509	0.59
171_L	345_A	0.509	0.59
38_I	109_F	0.508	0.59
290_Q	298_V	0.508	0.59
49_I	294_Q	0.508	0.59
275_A	331_A	0.507	0.59
316_Y	319_T	0.507	0.59
80_T	348_M	0.507	0.59
432_Y	436_R	0.507	0.59
213_A	356_V	0.506	0.59
392_S	395_G	0.506	0.59
86_I	257_I	0.505	0.59
223_V	334_H	0.504	0.59
241_N	252_G	0.504	0.59
167_I	349_F	0.504	0.59
168_A	392_S	0.504	0.59
62_S	290_Q	0.503	0.58
84_L	166_T	0.502	0.58
318_V	334_H	0.502	0.58
395_G	398_I	0.500	0.58

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3l1lA	2	0.7914	99.9	0.857	Contact Map
3giaA	1	0.8172	99.8	0.87	Contact Map
4djkA	2	0.7591	99.7	0.891	Contact Map
4wgvA	2	0.7656	98.3	0.94	Contact Map
2xq2A	2	0.8366	98.2	0.94	Contact Map
3dh4A	3	0.7978	97.9	0.946	Contact Map
4us3A	1	0.8215	97.5	0.95	Contact Map
2jlnA	1	0.8086	96.8	0.955	Contact Map
2a65A	2	0.8172	96.3	0.957	Contact Map
4xp4A	1	0.8151	94.6	0.962	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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