PBPB - BACSU - GREMLIN Contacts

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PBPB - Penicillin-binding protein 2B

UniProt:	Q07868	Sequences: MIQMPKKNKFMNRGAAILSICFALFFFVILGRMAYIQITGKANGEVLATKATEQHEKKRTIEASRGSILDRKGKVIAEDTATYKLIAILDKKMTTDVKHPQHVVNKEKTAEALSKVINLDKADILDILNKDAKQVEFGSAGRDITYSQKQKIEKMKLPGISFLRDTKRYYPNGVFASNLIGYAEVDEETNEISGAMGLEKVLDKYLKERDGYVTYESDKSGWELPNSKNKITAPKNGDNVYLTIDQKIQTFLEDSMTKVAQKYNPKKIMAAVVDPKTGKVLAMGQRPSFDPNKRDVTNYYNDLISYAYEPGSTMKIFTLAAAMQENVFNANEKYKSGTFEVGGAPVKDHNNGVGWGPTTYHDGVLRSSNVAFAKLAKEKLGYDRLNQYLHKFNFYQKTGIDLPGEVSSKINFKYEFDKASTAYGQASAVTPIQQIQAATAIANDGKMMKPYVIDHIVDPDKDKTIYQNKPESAGTPISASTAKKVRDILGEVVTSKIGTGQAYKIEGFDVAGKTGTAQIAGKGGYLDGTDNYIFSFMGMAPKDDPELLIYVAVQQPQLKAGQSSSDPVSEIFNPTMKNSLHYLNIEPTEKSDSDKEETKAQTMPDLTDQTVAAAQKKAKEENLTPIVIGSDVAVKEQYPKADEEVLTNQKVFLKTGGKIKMPDMTGWSRREVLQYGELAGIHIEVSGQGYAVSQSVKKDKEIKDKTVIKVKFKNPD	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	716 (561)
Sequences:	9990 (7197)
Seq/√Len:	303.8

ECOLI - FTSI PBP2 PBPC PBPB PBPA
BACSU - PBPB SP5D YQGF PBPA PBPH PBPG PBPF PBPC PBPI PBPD

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
270_A	575_T	3.458	1.00
458_D	463_K	3.265	1.00
272_V	549_I	3.205	1.00
279_K	454_D	3.192	1.00
446_K	475_T	3.141	1.00
199_E	209_R	3.138	1.00
537_M	550_Y	3.099	1.00
279_K	451_Y	3.088	1.00
486_R	539_M	3.060	1.00
208_E	217_S	2.957	1.00
490_G	509_D	2.933	1.00
69_L	239_N	2.872	1.00
512_G	536_F	2.782	1.00
325_E	384_R	2.753	1.00
435_I	550_Y	2.717	1.00
276_K	544_D	2.693	1.00
252_L	270_A	2.691	1.00
333_K	357_P	2.659	1.00
275_P	548_L	2.605	1.00
241_Y	455_H	2.541	1.00
256_M	268_I	2.512	1.00
387_Q	391_K	2.511	1.00
324_Q	481_T	2.494	1.00
274_D	277_T	2.409	1.00
99_H	103_V	2.389	1.00
340_E	345_P	2.383	1.00
436_Q	447_M	2.333	1.00
449_K	471_E	2.296	1.00
332_E	379_K	2.292	1.00
363_G	371_A	2.291	1.00
361_H	491_E	2.263	1.00
274_D	279_K	2.252	1.00
365_L	491_E	2.248	1.00
71_R	245_D	2.233	1.00
358_T	368_S	2.211	1.00
361_H	487_D	2.208	1.00
362_D	366_R	2.207	1.00
69_L	241_Y	2.201	1.00
329_N	332_E	2.178	1.00
255_S	574_P	2.139	1.00
251_F	578_N	2.132	1.00
258_K	574_P	2.130	1.00
71_R	279_K	2.112	1.00
266_K	555_Q	2.103	1.00
479_A	483_K	2.102	1.00
67_S	75_V	2.097	1.00
362_D	365_L	2.064	1.00
272_V	575_T	2.063	1.00
324_Q	478_S	2.063	1.00
273_V	435_I	2.046	1.00
281_L	547_L	2.013	1.00
573_N	577_K	2.013	1.00
274_D	546_E	2.012	1.00
32_R	35_Y	2.010	1.00
239_N	457_V	2.009	1.00
314_M	389_L	2.004	1.00
547_L	579_S	1.990	1.00
359_T	362_D	1.988	1.00
67_S	239_N	1.975	1.00
145_T	148_Q	1.969	1.00
384_R	387_Q	1.964	1.00
358_T	362_D	1.963	1.00
276_K	546_E	1.944	1.00
317_F	437_A	1.924	1.00
475_T	479_A	1.920	1.00
272_V	547_L	1.907	1.00
355_W	368_S	1.907	1.00
478_S	481_T	1.903	1.00
251_F	255_S	1.898	1.00
248_I	579_S	1.890	1.00
270_A	551_V	1.885	1.00
203_D	207_K	1.881	1.00
202_L	240_V	1.865	1.00
71_R	281_L	1.854	1.00
509_D	543_D	1.851	1.00
321_A	388_Y	1.831	1.00
253_E	284_G	1.803	1.00
248_I	281_L	1.799	1.00
250_T	254_D	1.794	1.00
70_D	74_K	1.794	1.00
365_L	495_S	1.787	1.00
320_A	481_T	1.780	1.00
444_D	483_K	1.778	1.00
511_A	539_M	1.766	1.00
218_D	222_W	1.750	1.00
348_D	368_S	1.748	1.00
491_E	495_S	1.740	1.00
252_L	282_A	1.733	1.00
444_D	479_A	1.733	1.00
444_D	486_R	1.732	1.00
376_A	422_A	1.708	1.00
440_A	447_M	1.703	1.00
439_T	548_L	1.695	1.00
538_G	572_F	1.693	1.00
320_A	392_F	1.686	1.00
121_K	125_L	1.686	1.00
487_D	490_G	1.675	1.00
252_L	575_T	1.675	1.00
572_F	576_M	1.671	1.00
320_A	477_I	1.665	1.00
442_A	511_A	1.664	1.00
75_V	78_E	1.664	1.00
300_Y	306_Y	1.653	1.00
455_H	467_Q	1.645	1.00
438_A	489_L	1.641	1.00
505_I	573_N	1.640	1.00
338_T	345_P	1.626	1.00
184_E	195_A	1.610	1.00
241_Y	457_V	1.610	1.00
553_V	571_I	1.603	1.00
551_V	572_F	1.591	1.00
438_A	537_M	1.586	1.00
316_I	441_I	1.585	1.00
446_K	472_S	1.580	1.00
123_D	126_D	1.579	1.00
257_T	286_R	1.576	1.00
273_V	450_P	1.570	1.00
477_I	482_A	1.569	1.00
374_K	379_K	1.565	1.00
34_A	38_I	1.563	1.00
363_G	372_F	1.561	1.00
199_E	210_D	1.551	1.00
241_Y	454_D	1.543	1.00
490_G	494_T	1.528	1.00
436_Q	450_P	1.526	1.00
431_P	550_Y	1.522	1.00
538_G	576_M	1.507	1.00
320_A	485_V	1.507	1.00
202_L	401_D	1.503	1.00
483_K	486_R	1.497	1.00
519_I	554_Q	1.494	1.00
392_F	477_I	1.493	1.00
493_V	512_G	1.493	1.00
63_A	210_D	1.487	1.00
111_E	121_K	1.481	1.00
120_D	123_D	1.468	1.00
74_K	246_Q	1.465	1.00
100_P	103_V	1.461	1.00
325_E	388_Y	1.456	1.00
493_V	510_V	1.456	1.00
99_H	102_H	1.455	1.00
443_N	448_M	1.452	1.00
272_V	579_S	1.443	1.00
243_T	279_K	1.440	1.00
88_I	92_K	1.438	1.00
280_V	452_V	1.435	1.00
254_D	258_K	1.435	1.00
43_N	46_V	1.433	1.00
328_F	360_Y	1.429	1.00
350_N	353_V	1.426	1.00
540_A	580_L	1.415	1.00
101_Q	198_L	1.407	1.00
460_D	463_K	1.406	1.00
256_M	284_G	1.405	1.00
310_P	429_V	1.405	1.00
254_D	578_N	1.398	1.00
319_L	372_F	1.393	1.00
364_V	488_I	1.391	1.00
339_F	374_K	1.390	1.00
383_D	413_K	1.380	1.00
447_M	474_G	1.374	1.00
89_L	102_H	1.372	1.00
247_K	582_Y	1.370	1.00
376_A	385_L	1.363	1.00
448_M	470_P	1.355	1.00
391_K	474_G	1.352	1.00
328_F	332_E	1.348	1.00
85_L	144_I	1.347	1.00
324_Q	391_K	1.344	1.00
330_A	488_I	1.342	1.00
114_S	173_G	1.340	1.00
274_D	281_L	1.334	1.00
31_G	35_Y	1.331	1.00
273_V	548_L	1.317	1.00
100_P	218_D	1.316	1.00
67_S	78_E	1.315	1.00
113_L	117_I	1.313	1.00
69_L	75_V	1.313	1.00
394_F	429_V	1.309	1.00
248_I	282_A	1.307	1.00
434_Q	537_M	1.307	1.00
141_G	148_Q	1.304	1.00
258_K	262_K	1.303	1.00
340_E	343_G	1.297	1.00
322_A	375_L	1.293	1.00
360_Y	371_A	1.275	1.00
271_A	431_P	1.273	1.00
209_R	235_K	1.272	1.00
334_Y	379_K	1.269	1.00
441_I	485_V	1.267	1.00
125_L	129_N	1.267	1.00
173_G	290_D	1.262	1.00
302_D	556_P	1.256	1.00
494_T	504_K	1.256	1.00
519_I	555_Q	1.249	1.00
492_V	500_G	1.248	1.00
248_I	272_V	1.240	1.00
370_V	374_K	1.230	1.00
451_Y	468_N	1.229	1.00
252_L	284_G	1.227	1.00
112_A	115_K	1.224	1.00
243_T	451_Y	1.221	1.00
493_V	536_F	1.218	1.00
480_S	484_K	1.217	1.00
486_R	511_A	1.216	1.00
89_L	173_G	1.212	1.00
335_K	357_P	1.210	1.00
271_A	432_I	1.209	1.00
179_L	244_I	1.203	1.00
316_I	489_L	1.203	1.00
330_A	484_K	1.201	1.00
273_V	439_T	1.201	1.00
270_A	549_I	1.200	1.00
108_K	112_A	1.199	1.00
386_N	390_H	1.189	1.00
74_K	247_K	1.189	1.00
198_L	240_V	1.189	1.00
283_M	303_L	1.180	1.00
238_D	465_I	1.180	1.00
257_T	261_Q	1.178	1.00
325_E	380_L	1.175	1.00
46_V	50_K	1.173	1.00
457_V	464_T	1.169	1.00
319_L	360_Y	1.169	1.00
414_Y	417_D	1.167	1.00
355_W	366_R	1.162	1.00
89_L	177_S	1.157	1.00
27_F	31_G	1.153	1.00
172_N	246_Q	1.149	1.00
320_A	388_Y	1.148	1.00
271_A	435_I	1.147	1.00
350_N	354_G	1.146	1.00
442_A	539_M	1.144	1.00
500_G	503_Y	1.137	1.00
275_P	439_T	1.126	1.00
35_Y	43_N	1.124	1.00
114_S	117_I	1.123	1.00
313_T	434_Q	1.118	1.00
531_N	555_Q	1.117	1.00
434_Q	535_S	1.115	1.00
358_T	366_R	1.113	1.00
435_I	548_L	1.111	1.00
377_K	419_A	1.111	1.00
578_N	581_H	1.109	1.00
464_T	467_Q	1.104	1.00
227_S	230_K	1.104	1.00
269_M	303_L	1.102	1.00
316_I	438_A	1.100	1.00
549_I	576_M	1.099	1.00
390_H	396_Q	1.098	1.00
317_F	389_L	1.096	1.00
388_Y	391_K	1.095	1.00
112_A	116_V	1.095	1.00
260_A	268_I	1.093	1.00
317_F	394_F	1.093	1.00
273_V	436_Q	1.092	1.00
381_G	384_R	1.089	1.00
257_T	265_P	1.086	1.00
323_M	488_I	1.084	1.00
383_D	387_Q	1.083	1.00
350_N	355_W	1.080	1.00
564_S	569_S	1.074	1.00
324_Q	388_Y	1.073	1.00
580_L	583_L	1.073	1.00
102_H	173_G	1.067	1.00
328_F	375_L	1.067	1.00
123_D	127_I	1.054	1.00
360_Y	375_L	1.053	1.00
551_V	571_I	1.052	1.00
320_A	482_A	1.042	1.00
549_I	575_T	1.039	1.00
24_L	28_V	1.038	1.00
335_K	368_S	1.037	1.00
98_K	210_D	1.037	1.00
547_L	583_L	1.035	1.00
275_P	547_L	1.033	1.00
89_L	93_M	1.031	1.00
121_K	124_I	1.027	1.00
251_F	254_D	1.023	1.00
171_P	174_V	1.020	1.00
107_E	125_L	1.019	1.00
482_A	486_R	1.012	1.00
395_Y	433_Q	1.010	1.00
535_S	552_A	1.003	1.00
32_R	36_I	1.003	1.00
425_Q	518_Q	1.001	1.00
177_S	288_S	0.999	1.00
105_N	108_K	0.994	1.00
327_V	379_K	0.993	1.00
255_S	578_N	0.993	1.00
198_L	242_L	0.992	1.00
534_F	564_S	0.990	1.00
373_A	423_Y	0.990	1.00
453_I	456_I	0.990	1.00
489_L	539_M	0.985	1.00
92_K	211_G	0.985	1.00
269_M	431_P	0.984	1.00
259_V	571_I	0.984	1.00
348_D	355_W	0.979	1.00
101_Q	105_N	0.977	1.00
328_F	379_K	0.976	1.00
534_F	562_Q	0.976	1.00
417_D	420_S	0.974	1.00
335_K	348_D	0.974	1.00
327_V	380_L	0.973	1.00
541_P	545_P	0.970	1.00
246_Q	250_T	0.968	1.00
394_F	437_A	0.967	1.00
122_A	126_D	0.964	1.00
320_A	441_I	0.963	1.00
106_K	114_S	0.961	1.00
546_E	583_L	0.960	1.00
88_I	136_E	0.957	1.00
441_I	486_R	0.954	1.00
364_V	489_L	0.953	1.00
114_S	119_L	0.953	1.00
565_S	569_S	0.952	1.00
388_Y	392_F	0.952	1.00
327_V	384_R	0.949	1.00
255_S	258_K	0.948	1.00
429_V	434_Q	0.947	1.00
355_W	358_T	0.946	1.00
176_A	179_L	0.944	1.00
399_G	405_E	0.944	1.00
388_Y	477_I	0.941	1.00
401_D	451_Y	0.941	1.00
349_H	563_S	0.938	1.00
119_L	124_I	0.936	1.00
252_L	272_V	0.932	1.00
527_D	530_D	0.932	1.00
148_Q	151_K	0.930	1.00
283_M	301_N	0.929	1.00
448_M	472_S	0.926	1.00
322_A	328_F	0.923	1.00
268_I	553_V	0.922	1.00
431_P	435_I	0.915	1.00
267_K	302_D	0.915	1.00
384_R	388_Y	0.914	1.00
442_A	548_L	0.914	1.00
271_A	283_M	0.914	1.00
534_F	568_V	0.911	1.00
398_T	405_E	0.910	1.00
275_P	442_A	0.907	1.00
361_H	488_I	0.905	1.00
455_H	464_T	0.903	1.00
337_G	374_K	0.903	1.00
247_K	250_T	0.898	1.00
260_A	286_R	0.898	1.00
125_L	128_L	0.896	1.00
339_F	377_K	0.895	1.00
68_I	79_D	0.894	1.00
491_E	494_T	0.894	1.00
341_V	419_A	0.893	1.00
483_K	487_D	0.882	1.00
146_Y	150_Q	0.881	1.00
576_M	580_L	0.880	1.00
195_A	204_K	0.878	1.00
72_K	245_D	0.878	1.00
176_A	244_I	0.877	1.00
339_F	373_A	0.874	1.00
434_Q	550_Y	0.874	1.00
35_Y	39_T	0.873	1.00
101_Q	218_D	0.872	1.00
144_I	148_Q	0.872	1.00
283_M	452_V	0.871	1.00
307_A	428_A	0.870	1.00
198_L	202_L	0.869	1.00
333_K	359_T	0.867	1.00
503_Y	569_S	0.866	1.00
117_I	121_K	0.865	1.00
483_K	591_S	0.864	1.00
436_Q	449_K	0.862	1.00
114_S	120_D	0.862	1.00
323_M	481_T	0.857	1.00
358_T	371_A	0.855	1.00
205_Y	238_D	0.852	1.00
84_K	165_D	0.849	1.00
252_L	268_I	0.848	1.00
109_T	113_L	0.847	1.00
486_R	489_L	0.847	1.00
338_T	347_K	0.846	1.00
368_S	371_A	0.845	1.00
64_S	236_N	0.845	1.00
211_G	234_P	0.844	1.00
172_N	175_F	0.843	1.00
406_V	430_T	0.841	1.00
387_Q	390_H	0.841	1.00
481_T	485_V	0.841	1.00
128_L	131_D	0.839	1.00
481_T	484_K	0.838	1.00
149_K	153_E	0.838	1.00
271_A	550_Y	0.836	1.00
130_K	139_S	0.835	1.00
102_H	114_S	0.832	1.00
34_A	39_T	0.831	1.00
141_G	150_Q	0.830	1.00
510_V	540_A	0.829	1.00
73_G	454_D	0.829	1.00
259_V	262_K	0.828	1.00
255_S	571_I	0.827	1.00
109_T	112_A	0.827	1.00
174_V	177_S	0.827	1.00
509_D	585_I	0.827	1.00
256_M	270_A	0.826	1.00
574_P	577_K	0.826	1.00
301_N	304_I	0.824	1.00
321_A	380_L	0.824	1.00
336_S	370_V	0.823	1.00
436_Q	439_T	0.822	1.00
317_F	392_F	0.822	1.00
334_Y	374_K	0.821	1.00
102_H	105_N	0.821	1.00
385_L	389_L	0.820	1.00
394_F	434_Q	0.818	1.00
493_V	500_G	0.818	1.00
85_L	160_I	0.818	1.00
540_A	576_M	0.818	1.00
270_A	571_I	0.813	1.00
87_A	160_I	0.812	1.00
520_A	530_D	0.809	1.00
202_L	453_I	0.809	1.00
205_Y	456_I	0.806	1.00
201_V	403_P	0.805	1.00
110_A	114_S	0.805	1.00
176_A	180_I	0.804	1.00
547_L	576_M	0.803	1.00
277_T	448_M	0.802	1.00
243_T	454_D	0.802	1.00
546_E	586_E	0.799	1.00
147_S	151_K	0.798	1.00
202_L	205_Y	0.796	1.00
184_E	194_G	0.795	1.00
17_I	21_C	0.793	1.00
87_A	93_M	0.793	1.00
209_R	212_Y	0.791	1.00
360_Y	488_I	0.790	1.00
319_L	485_V	0.789	1.00
449_K	473_A	0.788	1.00
307_A	406_V	0.787	0.99
318_T	422_A	0.787	0.99
512_G	569_S	0.785	0.99
553_V	568_V	0.784	0.99
70_D	246_Q	0.784	0.99
549_I	572_F	0.784	0.99
110_A	113_L	0.783	0.99
347_K	351_N	0.780	0.99
238_D	456_I	0.779	0.99
271_A	303_L	0.779	0.99
364_V	372_F	0.778	0.99
248_I	575_T	0.777	0.99
493_V	501_Q	0.776	0.99
176_A	253_E	0.774	0.99
110_A	125_L	0.774	0.99
300_Y	305_S	0.771	0.99
58_K	212_Y	0.770	0.99
139_S	142_R	0.764	0.99
434_Q	438_A	0.762	0.99
380_L	384_R	0.761	0.99
45_E	49_T	0.760	0.99
318_T	385_L	0.760	0.99
150_Q	154_K	0.760	0.99
105_N	185_V	0.759	0.99
116_V	167_K	0.758	0.99
420_S	426_A	0.756	0.99
170_Y	178_N	0.753	0.99
122_A	125_L	0.753	0.99
508_F	585_I	0.753	0.99
321_A	325_E	0.752	0.99
85_L	199_E	0.750	0.99
212_Y	232_T	0.750	0.99
269_M	552_A	0.749	0.99
514_T	538_G	0.748	0.99
500_G	536_F	0.744	0.99
533_I	552_A	0.744	0.99
73_G	241_Y	0.743	0.99
541_P	546_E	0.742	0.99
492_V	499_T	0.742	0.99
337_G	356_G	0.741	0.99
316_I	364_V	0.739	0.99
500_G	514_T	0.739	0.99
317_F	434_Q	0.738	0.99
502_A	569_S	0.738	0.99
563_S	566_D	0.737	0.99
480_S	593_S	0.736	0.99
484_K	487_D	0.736	0.99
444_D	482_A	0.736	0.99
432_I	450_P	0.735	0.99
567_P	570_E	0.734	0.99
534_F	565_S	0.733	0.99
428_A	431_P	0.731	0.99
484_K	488_I	0.730	0.99
501_Q	504_K	0.729	0.99
253_E	257_T	0.728	0.99
346_V	420_S	0.727	0.99
66_G	240_V	0.725	0.99
330_A	361_H	0.725	0.99
107_E	117_I	0.724	0.99
346_V	423_Y	0.724	0.99
334_Y	363_G	0.724	0.99
508_F	546_E	0.724	0.99
400_I	452_V	0.721	0.99
319_L	488_I	0.721	0.99
23_A	27_F	0.721	0.99
430_T	433_Q	0.719	0.99
276_K	444_D	0.719	0.99
105_N	109_T	0.718	0.99
105_N	222_W	0.718	0.99
252_L	255_S	0.717	0.99
280_V	283_M	0.717	0.99
490_G	493_V	0.717	0.99
564_S	568_V	0.716	0.99
495_S	501_Q	0.714	0.99
423_Y	518_Q	0.714	0.99
480_S	483_K	0.713	0.99
564_S	570_E	0.713	0.99
13_R	17_I	0.712	0.99
457_V	461_K	0.712	0.99
313_T	537_M	0.712	0.99
376_A	382_Y	0.712	0.99
576_M	579_S	0.712	0.99
16_A	20_I	0.711	0.99
506_E	573_N	0.706	0.99
240_V	456_I	0.705	0.99
358_T	363_G	0.705	0.99
85_L	152_I	0.705	0.99
33_M	36_I	0.704	0.99
382_Y	418_K	0.702	0.99
107_E	110_A	0.701	0.99
575_T	579_S	0.698	0.99
396_Q	433_Q	0.696	0.99
485_V	488_I	0.696	0.99
84_K	163_L	0.695	0.99
174_V	288_S	0.694	0.99
259_V	574_P	0.693	0.99
553_V	567_P	0.690	0.99
508_F	580_L	0.690	0.99
540_A	547_L	0.688	0.99
280_V	400_I	0.688	0.99
443_N	446_K	0.687	0.99
109_T	157_L	0.687	0.99
372_F	422_A	0.685	0.99
591_S	594_D	0.684	0.99
492_V	536_F	0.684	0.99
361_H	365_L	0.684	0.99
273_V	280_V	0.683	0.99
273_V	448_M	0.683	0.99
273_V	550_Y	0.682	0.99
208_E	211_G	0.681	0.99
533_I	554_Q	0.681	0.99
259_V	263_Y	0.680	0.99
255_S	575_T	0.680	0.99
68_I	76_I	0.678	0.99
183_A	225_P	0.677	0.98
310_P	314_M	0.675	0.98
512_G	538_G	0.675	0.98
440_A	476_P	0.674	0.98
110_A	117_I	0.674	0.98
272_V	275_P	0.673	0.98
536_F	572_F	0.672	0.98
119_L	123_D	0.672	0.98
314_M	317_F	0.671	0.98
109_T	114_S	0.670	0.98
106_K	109_T	0.667	0.98
29_I	32_R	0.667	0.98
534_F	567_P	0.666	0.98
374_K	377_K	0.666	0.98
509_D	587_P	0.664	0.98
244_I	452_V	0.662	0.98
102_H	106_K	0.661	0.98
110_A	116_V	0.661	0.98
318_T	376_A	0.661	0.98
165_D	168_R	0.660	0.98
355_W	362_D	0.660	0.98
346_V	373_A	0.660	0.98
397_K	407_S	0.658	0.98
323_M	485_V	0.657	0.98
107_E	111_E	0.656	0.98
436_Q	440_A	0.656	0.98
263_Y	567_P	0.655	0.98
131_D	137_F	0.654	0.98
458_D	465_I	0.652	0.98
76_I	246_Q	0.652	0.98
510_V	536_F	0.651	0.98
528_G	531_N	0.648	0.98
309_E	517_A	0.648	0.98
402_L	452_V	0.648	0.98
33_M	37_Q	0.647	0.98
311_G	517_A	0.647	0.98
310_P	425_Q	0.647	0.98
323_M	329_N	0.646	0.98
308_Y	533_I	0.643	0.98
543_D	588_T	0.641	0.98
84_K	139_S	0.640	0.98
201_V	401_D	0.640	0.98
21_C	25_F	0.640	0.98
117_I	120_D	0.638	0.98
503_Y	512_G	0.637	0.98
283_M	304_I	0.637	0.98
304_I	402_L	0.637	0.98
370_V	373_A	0.635	0.98
334_Y	371_A	0.634	0.98
134_Q	138_G	0.634	0.98
487_D	491_E	0.634	0.98
492_V	498_G	0.634	0.98
77_A	292_N	0.634	0.98
389_L	394_F	0.633	0.98
492_V	512_G	0.631	0.98
395_Y	408_S	0.631	0.98
514_T	572_F	0.631	0.98
89_L	114_S	0.631	0.98
348_D	370_V	0.631	0.98
285_Q	303_L	0.629	0.98
420_S	425_Q	0.629	0.98
112_A	120_D	0.628	0.98
252_L	256_M	0.626	0.97
267_K	554_Q	0.626	0.97
435_I	537_M	0.626	0.97
398_T	433_Q	0.626	0.97
431_P	535_S	0.625	0.97
113_L	152_I	0.625	0.97
108_K	111_E	0.625	0.97
55_H	216_E	0.625	0.97
400_I	432_I	0.624	0.97
372_F	376_A	0.624	0.97
277_T	451_Y	0.624	0.97
213_V	231_I	0.623	0.97
365_L	492_V	0.622	0.97
382_Y	421_T	0.622	0.97
209_R	232_T	0.621	0.97
71_R	454_D	0.620	0.97
149_K	166_T	0.620	0.97
532_Y	562_Q	0.620	0.97
350_N	368_S	0.618	0.97
103_V	106_K	0.618	0.97
114_S	124_I	0.617	0.97
214_T	230_K	0.617	0.97
440_A	477_I	0.617	0.97
105_N	225_P	0.616	0.97
88_I	177_S	0.613	0.97
69_L	73_G	0.613	0.97
126_D	130_K	0.613	0.97
289_F	292_N	0.613	0.97
534_F	563_S	0.611	0.97
505_I	577_K	0.611	0.97
469_K	472_S	0.608	0.97
199_E	203_D	0.607	0.97
93_M	101_Q	0.607	0.97
247_K	251_F	0.606	0.97
112_A	155_M	0.605	0.97
116_V	148_Q	0.604	0.97
38_I	44_G	0.604	0.97
107_E	114_S	0.604	0.97
80_T	169_Y	0.603	0.97
20_I	24_L	0.603	0.97
113_L	116_V	0.602	0.97
436_Q	448_M	0.602	0.97
458_D	461_K	0.602	0.97
52_T	55_H	0.601	0.97
381_G	418_K	0.599	0.97
319_L	363_G	0.599	0.97
58_K	214_T	0.599	0.97
184_E	196_M	0.598	0.97
250_T	253_E	0.598	0.97
44_G	48_A	0.598	0.97
328_F	334_Y	0.596	0.97
198_L	452_V	0.595	0.97
425_Q	428_A	0.594	0.97
313_T	535_S	0.592	0.97
347_K	354_G	0.591	0.96
451_Y	469_K	0.591	0.96
398_T	430_T	0.591	0.96
128_L	132_A	0.591	0.96
195_A	200_K	0.591	0.96
86_I	161_S	0.590	0.96
135_V	138_G	0.590	0.96
477_I	481_T	0.588	0.96
325_E	328_F	0.587	0.96
365_L	488_I	0.587	0.96
274_D	448_M	0.587	0.96
397_K	400_I	0.587	0.96
511_A	541_P	0.586	0.96
401_D	453_I	0.585	0.96
337_G	354_G	0.584	0.96
319_L	364_V	0.584	0.96
339_F	370_V	0.583	0.96
60_T	210_D	0.583	0.96
319_L	375_L	0.582	0.96
446_K	470_P	0.582	0.96
435_I	439_T	0.580	0.96
389_L	410_I	0.580	0.96
67_S	79_D	0.580	0.96
180_I	198_L	0.579	0.96
213_V	226_N	0.579	0.96
344_A	420_S	0.578	0.96
464_T	468_N	0.578	0.96
276_K	443_N	0.577	0.96
580_L	585_I	0.577	0.96
126_D	139_S	0.576	0.96
314_M	318_T	0.576	0.96
48_A	52_T	0.576	0.96
116_V	120_D	0.575	0.96
254_D	257_T	0.575	0.96
354_G	370_V	0.574	0.96
26_F	30_L	0.574	0.96
454_D	467_Q	0.574	0.96
17_I	20_I	0.573	0.96
425_Q	517_A	0.573	0.96
280_V	432_I	0.573	0.96
438_A	548_L	0.573	0.96
98_K	101_Q	0.571	0.96
336_S	339_F	0.571	0.96
134_Q	137_F	0.570	0.96
259_V	570_E	0.570	0.96
447_M	450_P	0.570	0.96
471_E	474_G	0.570	0.96
490_G	587_P	0.570	0.96
360_Y	484_K	0.569	0.96
351_N	354_G	0.569	0.96
416_F	419_A	0.569	0.96
77_A	171_P	0.569	0.96
240_V	453_I	0.569	0.96
196_M	289_F	0.568	0.96
397_K	405_E	0.567	0.96
451_Y	454_D	0.566	0.95
144_I	149_K	0.565	0.95
87_A	210_D	0.565	0.95
441_I	477_I	0.565	0.95
31_G	34_A	0.563	0.95
106_K	110_A	0.560	0.95
508_F	577_K	0.560	0.95
405_E	408_S	0.560	0.95
235_K	238_D	0.560	0.95
281_L	454_D	0.557	0.95
127_I	131_D	0.557	0.95
328_F	371_A	0.557	0.95
43_N	47_L	0.555	0.95
539_M	548_L	0.555	0.95
211_G	237_G	0.555	0.95
308_Y	554_Q	0.554	0.95
179_L	283_M	0.553	0.95
34_A	37_Q	0.553	0.95
321_A	385_L	0.553	0.95
323_M	484_K	0.552	0.95
353_V	356_G	0.552	0.95
332_E	371_A	0.551	0.95
266_K	554_Q	0.550	0.95
276_K	448_M	0.550	0.95
322_A	380_L	0.549	0.95
295_D	298_N	0.548	0.95
157_L	160_I	0.547	0.95
14_G	18_L	0.547	0.95
208_E	212_Y	0.547	0.95
389_L	393_N	0.547	0.95
85_L	162_F	0.546	0.95
318_T	389_L	0.546	0.95
57_K	217_S	0.546	0.95
245_D	248_I	0.543	0.94
316_I	485_V	0.543	0.94
193_S	203_D	0.543	0.94
142_R	165_D	0.543	0.94
107_E	113_L	0.542	0.94
114_S	121_K	0.540	0.94
349_H	354_G	0.540	0.94
177_S	289_F	0.539	0.94
149_K	152_I	0.539	0.94
574_P	578_N	0.539	0.94
271_A	548_L	0.538	0.94
63_A	211_G	0.538	0.94
372_F	375_L	0.538	0.94
119_L	127_I	0.536	0.94
551_V	568_V	0.536	0.94
200_K	403_P	0.536	0.94
165_D	169_Y	0.536	0.94
394_F	433_Q	0.535	0.94
269_M	285_Q	0.535	0.94
201_V	205_Y	0.535	0.94
109_T	117_I	0.535	0.94
294_R	298_N	0.534	0.94
376_A	421_T	0.532	0.94
49_T	53_E	0.531	0.94
503_Y	565_S	0.531	0.94
439_T	448_M	0.531	0.94
205_Y	466_Y	0.530	0.94
540_A	545_P	0.530	0.94
144_I	183_A	0.530	0.94
386_N	412_F	0.529	0.94
429_V	437_A	0.529	0.94
35_Y	38_I	0.529	0.94
349_H	355_W	0.528	0.94
78_E	169_Y	0.528	0.94
80_T	143_D	0.527	0.93
547_L	580_L	0.527	0.93
437_A	440_A	0.526	0.93
553_V	565_S	0.526	0.93
502_A	566_D	0.526	0.93
482_A	485_V	0.525	0.93
393_N	447_M	0.523	0.93
441_I	489_L	0.523	0.93
579_S	583_L	0.523	0.93
175_F	253_E	0.523	0.93
298_N	302_D	0.522	0.93
124_I	128_L	0.522	0.93
392_F	440_A	0.522	0.93
216_E	225_P	0.522	0.93
196_M	200_K	0.522	0.93
174_V	253_E	0.521	0.93
143_D	167_K	0.521	0.93
304_I	404_G	0.521	0.93
309_E	533_I	0.517	0.93
104_V	107_E	0.515	0.93
252_L	549_I	0.515	0.93
258_K	261_Q	0.513	0.93
59_R	213_V	0.513	0.93
510_V	572_F	0.511	0.92
306_Y	430_T	0.511	0.92
72_K	247_K	0.511	0.92
30_L	33_M	0.511	0.92
86_I	165_D	0.510	0.92
451_Y	470_P	0.510	0.92
380_L	388_Y	0.509	0.92
380_L	385_L	0.508	0.92
317_F	438_A	0.508	0.92
110_A	121_K	0.508	0.92
109_T	116_V	0.507	0.92
585_I	588_T	0.507	0.92
186_D	195_A	0.507	0.92
100_P	215_Y	0.506	0.92
185_V	198_L	0.506	0.92
253_E	286_R	0.506	0.92
480_S	594_D	0.505	0.92
137_F	140_A	0.504	0.92
187_E	195_A	0.504	0.92
22_F	38_I	0.504	0.92
316_I	437_A	0.503	0.92
259_V	553_V	0.503	0.92
110_A	115_K	0.502	0.92
510_V	573_N	0.502	0.92
348_D	351_N	0.502	0.92
32_R	38_I	0.502	0.92
506_E	509_D	0.501	0.92
538_G	551_V	0.501	0.92
124_I	127_I	0.500	0.92

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
1qmeA	1	0.75	100	0.228	Contact Map
4ye5A	1	0.7332	100	0.322	Contact Map
4ovdA	2	0.5754	100	0.327	Contact Map
3equA	1	0.595	100	0.333	Contact Map
2wadA	1	0.6955	100	0.338	Contact Map
3ue3A	1	0.5964	100	0.359	Contact Map
4oonA	1	0.4888	100	0.362	Contact Map
4bjpA	2	0.5628	100	0.364	Contact Map
3pbtA	1	0.6872	100	0.366	Contact Map
3udfA	2	0.5796	100	0.367	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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