NRGA - BACSU - GREMLIN Contacts

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NRGA - Ammonium transporter NrgA

UniProt:	Q07429	Sequences: MQMGDTVFMFFCALLVWLMTPGLALFYGGMVKSKNVLSTAMHSFSSIAIVSIVWVLFGYTLAFAPGNSIIGGLEWAGLKGVGFDPGDYSDTIPHSLFMMFQMTFAVLTTAIISGAFAERMRFGAFLLFSVLWASLVYTPVAHWVWGGGWIGQLGALDFAGGNVVHISSGVAGLVLAIVLGKRKDGTASSPHNLIYTFLGGALIWFGWFGFNVGSALTLDGVAMYAFINTNTAAAAGIAGWILVEWIINKKPTMLGAVSGAIAGLVAITPAAGFVTPFASIIIGIIGGAVCFWGVFSLKKKFGYDDALDAFGLHGIGGTWGGIATGLFATTSVNSAGADGLFYGDASLIWKQIVAIAATYVFVFIVTFVIIKIVSLFLPLRATEEEESLGLDLTMHGEKAYQDSM	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	404 (388)
Sequences:	5444 (2904)
Seq/√Len:	147.4

ECOLI - AMTB
BACSU - NRGA
SULSO - Q97Z75

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
174_V	363_F	4.668	1.00
18_L	202_L	4.523	1.00
371_K	374_S	4.042	1.00
319_W	323_A	3.595	1.00
266_A	286_G	3.364	1.00
239_G	284_I	3.343	1.00
175_L	370_I	3.261	1.00
274_V	282_I	3.226	1.00
57_F	134_S	3.189	1.00
293_G	315_I	2.896	1.00
382_T	385_E	2.850	1.00
149_W	357_A	2.799	1.00
322_I	352_I	2.728	1.00
200_G	257_V	2.651	1.00
326_L	341_F	2.635	1.00
96_L	223_M	2.629	1.00
48_A	237_I	2.594	1.00
318_T	355_I	2.561	1.00
349_W	353_V	2.518	1.00
371_K	375_L	2.481	1.00
208_F	230_N	2.422	1.00
245_W	251_P	2.402	1.00
155_A	354_A	2.308	1.00
289_V	319_W	2.295	1.00
212_V	226_F	2.268	1.00
367_F	371_K	2.267	1.00
78_L	98_M	2.241	1.00
290_C	316_G	2.230	1.00
143_W	149_W	2.221	1.00
13_A	99_M	2.199	1.00
285_I	319_W	2.167	1.00
237_I	260_A	2.083	1.00
156_L	272_G	2.024	1.00
224_Y	228_N	2.024	1.00
235_A	280_I	2.014	1.00
267_I	274_V	1.982	1.00
140_V	358_T	1.955	1.00
51_S	102_M	1.952	1.00
178_V	367_F	1.944	1.00
5_D	91_T	1.924	1.00
140_V	167_S	1.912	1.00
56_L	77_G	1.906	1.00
381_A	390_L	1.902	1.00
127_L	377_L	1.890	1.00
136_V	365_V	1.890	1.00
50_V	133_A	1.889	1.00
12_C	213_G	1.876	1.00
162_N	321_G	1.872	1.00
237_I	256_A	1.872	1.00
352_I	356_A	1.870	1.00
116_F	120_M	1.865	1.00
53_V	130_V	1.788	1.00
43_S	113_S	1.774	1.00
61_L	70_I	1.770	1.00
266_A	282_I	1.732	1.00
109_T	129_S	1.719	1.00
121_R	378_P	1.711	1.00
323_A	326_L	1.694	1.00
197_F	253_M	1.687	1.00
30_M	254_L	1.677	1.00
63_F	97_F	1.667	1.00
346_S	350_K	1.663	1.00
62_A	141_A	1.647	1.00
55_V	231_T	1.637	1.00
361_F	365_V	1.635	1.00
45_S	126_L	1.626	1.00
52_I	280_I	1.617	1.00
171_A	362_V	1.616	1.00
124_A	373_V	1.600	1.00
153_L	353_V	1.581	1.00
51_S	230_N	1.579	1.00
243_V	288_A	1.578	1.00
53_V	138_T	1.563	1.00
8_F	11_F	1.542	1.00
345_A	349_W	1.531	1.00
98_M	227_I	1.529	1.00
59_Y	94_H	1.510	1.00
143_W	357_A	1.499	1.00
75_W	94_H	1.492	1.00
196_T	257_V	1.489	1.00
169_G	314_G	1.482	1.00
153_L	350_K	1.481	1.00
339_G	342_Y	1.481	1.00
171_A	366_T	1.472	1.00
166_I	170_V	1.470	1.00
322_I	348_I	1.469	1.00
170_V	363_F	1.467	1.00
231_T	280_I	1.462	1.00
297_L	301_F	1.446	1.00
349_W	352_I	1.443	1.00
385_E	393_T	1.410	1.00
4_G	7_V	1.407	1.00
373_V	377_L	1.407	1.00
41_M	256_A	1.401	1.00
293_G	311_G	1.395	1.00
51_S	234_A	1.393	1.00
353_V	357_A	1.389	1.00
127_L	373_V	1.385	1.00
350_K	353_V	1.354	1.00
111_I	309_A	1.354	1.00
17_W	205_F	1.352	1.00
156_L	273_F	1.351	1.00
193_L	254_L	1.348	1.00
17_W	47_I	1.344	1.00
144_V	163_V	1.340	1.00
53_V	134_S	1.323	1.00
319_W	326_L	1.323	1.00
373_V	376_F	1.318	1.00
296_S	300_K	1.317	1.00
374_S	378_P	1.308	1.00
116_F	175_L	1.294	1.00
383_E	387_S	1.294	1.00
53_V	57_F	1.291	1.00
288_A	292_W	1.289	1.00
170_V	359_Y	1.286	1.00
5_D	219_D	1.284	1.00
49_I	126_L	1.282	1.00
131_L	369_I	1.279	1.00
6_T	93_P	1.278	1.00
6_T	96_L	1.275	1.00
120_M	379_L	1.271	1.00
191_H	400_Y	1.266	1.00
150_I	354_A	1.262	1.00
162_N	358_T	1.251	1.00
243_V	292_W	1.241	1.00
178_V	371_K	1.241	1.00
46_S	125_F	1.241	1.00
215_A	222_A	1.238	1.00
55_V	280_I	1.233	1.00
49_I	130_V	1.233	1.00
388_L	393_T	1.228	1.00
52_I	235_A	1.223	1.00
52_I	238_A	1.220	1.00
38_S	42_H	1.218	1.00
215_A	219_D	1.215	1.00
9_M	92_I	1.200	1.00
176_A	303_Y	1.193	1.00
261_I	312_L	1.191	1.00
8_F	12_C	1.190	1.00
115_A	172_G	1.186	1.00
353_V	356_A	1.185	1.00
204_W	260_A	1.183	1.00
348_I	352_I	1.178	1.00
47_I	106_V	1.173	1.00
224_Y	276_P	1.165	1.00
325_G	348_I	1.156	1.00
340_L	343_G	1.151	1.00
170_V	174_V	1.148	1.00
192_N	195_Y	1.141	1.00
99_M	226_F	1.139	1.00
28_G	36_V	1.132	0.99
167_S	362_V	1.131	0.99
146_G	151_G	1.130	0.99
322_I	355_I	1.125	0.99
166_I	359_Y	1.124	0.99
53_V	133_A	1.124	0.99
166_I	355_I	1.123	0.99
277_F	281_I	1.122	0.99
275_T	329_T	1.122	0.99
9_M	96_L	1.120	0.99
121_R	124_A	1.111	0.99
13_A	96_L	1.106	0.99
63_F	101_Q	1.102	0.99
35_N	390_L	1.102	0.99
321_G	355_I	1.101	0.99
14_L	205_F	1.100	0.99
318_T	359_Y	1.096	0.99
385_E	394_M	1.096	0.99
126_L	130_V	1.085	0.99
314_G	359_Y	1.074	0.99
144_V	358_T	1.071	0.99
134_S	138_T	1.065	0.99
38_S	395_H	1.065	0.99
17_W	103_T	1.064	0.99
165_H	168_S	1.063	0.99
282_I	323_A	1.062	0.99
20_T	106_V	1.058	0.99
133_A	138_T	1.054	0.99
77_G	277_F	1.053	0.99
166_I	318_T	1.050	0.99
360_V	364_I	1.050	0.99
7_V	11_F	1.050	0.99
42_H	113_S	1.049	0.99
293_G	297_L	1.041	0.99
30_M	196_T	1.039	0.99
383_E	386_E	1.033	0.99
341_F	344_D	1.030	0.99
303_Y	311_G	1.029	0.99
177_I	303_Y	1.026	0.99
359_Y	363_F	1.025	0.99
368_V	372_I	1.022	0.99
32_K	118_E	1.018	0.99
285_I	289_V	1.018	0.99
231_T	276_P	1.017	0.99
235_A	284_I	1.015	0.99
275_T	278_A	1.013	0.99
162_N	166_I	1.011	0.99
173_L	303_Y	1.010	0.99
230_N	233_A	1.009	0.99
284_I	288_A	1.007	0.99
384_E	388_L	0.998	0.99
245_W	249_K	0.994	0.99
21_P	198_L	0.993	0.99
154_G	350_K	0.991	0.99
97_F	216_L	0.985	0.99
120_M	179_L	0.982	0.99
233_A	236_G	0.981	0.98
330_T	342_Y	0.981	0.98
346_S	349_W	0.981	0.98
124_A	377_L	0.977	0.98
298_K	311_G	0.973	0.98
236_G	259_G	0.973	0.98
140_V	361_F	0.966	0.98
155_A	321_G	0.962	0.98
365_V	369_I	0.962	0.98
9_M	216_L	0.962	0.98
281_I	285_I	0.961	0.98
373_V	378_P	0.957	0.98
95_S	224_Y	0.956	0.98
239_G	287_G	0.955	0.98
215_A	221_V	0.955	0.98
310_F	314_G	0.950	0.98
36_V	191_H	0.948	0.98
262_A	316_G	0.944	0.98
39_T	117_A	0.944	0.98
369_I	373_V	0.943	0.98
380_R	386_E	0.937	0.98
372_I	375_L	0.935	0.98
178_V	374_S	0.934	0.98
326_L	348_I	0.933	0.98
364_I	368_V	0.932	0.98
370_I	379_L	0.925	0.98
204_W	230_N	0.921	0.98
239_G	288_A	0.920	0.98
238_A	242_L	0.919	0.98
64_A	72_G	0.918	0.98
325_G	351_Q	0.916	0.98
174_V	178_V	0.912	0.98
14_L	226_F	0.912	0.98
174_V	367_F	0.911	0.98
102_M	230_N	0.906	0.97
45_S	241_I	0.905	0.97
294_V	311_G	0.903	0.97
36_V	399_A	0.901	0.97
258_S	312_L	0.901	0.97
347_L	350_K	0.900	0.97
363_F	367_F	0.899	0.97
15_L	209_G	0.897	0.97
161_G	269_P	0.894	0.97
149_W	353_V	0.892	0.97
207_W	268_T	0.891	0.97
339_G	343_G	0.890	0.97
52_I	56_L	0.889	0.97
113_S	125_F	0.887	0.97
18_L	205_F	0.883	0.97
197_F	257_V	0.880	0.97
285_I	323_A	0.879	0.97
367_F	374_S	0.878	0.97
95_S	227_I	0.878	0.97
95_S	223_M	0.871	0.97
235_A	239_G	0.871	0.97
46_S	129_S	0.871	0.97
4_G	218_L	0.868	0.97
211_N	268_T	0.865	0.97
140_V	362_V	0.865	0.97
135_L	365_V	0.859	0.97
262_A	312_L	0.858	0.96
228_N	271_A	0.857	0.96
32_K	188_S	0.856	0.96
225_A	271_A	0.855	0.96
25_L	198_L	0.853	0.96
373_V	379_L	0.852	0.96
170_V	314_G	0.851	0.96
65_P	74_E	0.846	0.96
87_D	90_D	0.846	0.96
39_T	43_S	0.843	0.96
323_A	327_F	0.841	0.96
282_I	327_F	0.841	0.96
369_I	372_I	0.838	0.96
147_G	152_Q	0.836	0.96
278_A	281_I	0.836	0.96
274_V	327_F	0.836	0.96
318_T	322_I	0.836	0.96
177_I	363_F	0.836	0.96
232_A	267_I	0.835	0.96
75_W	81_V	0.834	0.96
35_N	118_E	0.829	0.96
241_I	251_P	0.829	0.96
195_Y	198_L	0.827	0.96
140_V	143_W	0.826	0.96
352_I	355_I	0.821	0.96
92_I	216_L	0.818	0.95
270_A	274_V	0.818	0.95
273_F	328_A	0.818	0.95
101_Q	214_S	0.817	0.95
236_G	239_G	0.815	0.95
243_V	287_G	0.815	0.95
7_V	218_L	0.815	0.95
356_A	360_V	0.812	0.95
149_W	153_L	0.809	0.95
193_L	253_M	0.808	0.95
239_G	243_V	0.797	0.95
36_V	40_A	0.796	0.95
252_T	397_E	0.794	0.95
131_L	135_L	0.794	0.95
61_L	138_T	0.793	0.95
20_T	43_S	0.791	0.95
147_G	151_G	0.786	0.94
167_S	171_A	0.786	0.94
374_S	377_L	0.782	0.94
31_V	307_L	0.779	0.94
25_L	194_I	0.777	0.94
385_E	388_L	0.777	0.94
348_I	355_I	0.776	0.94
9_M	13_A	0.768	0.94
119_R	304_D	0.768	0.94
258_S	287_G	0.766	0.94
93_P	96_L	0.764	0.93
162_N	265_V	0.762	0.93
266_A	323_A	0.761	0.93
242_L	246_I	0.757	0.93
130_V	134_S	0.757	0.93
174_V	177_I	0.756	0.93
345_A	352_I	0.755	0.93
51_S	260_A	0.755	0.93
270_A	282_I	0.752	0.93
57_F	138_T	0.752	0.93
368_V	371_K	0.749	0.93
41_M	122_F	0.749	0.93
243_V	291_F	0.748	0.93
123_G	127_L	0.746	0.93
296_S	299_K	0.745	0.93
6_T	92_I	0.743	0.92
267_I	282_I	0.743	0.92
37_L	253_M	0.738	0.92
46_S	113_S	0.735	0.92
25_L	195_Y	0.734	0.92
170_V	318_T	0.732	0.92
266_A	319_W	0.732	0.92
114_G	305_D	0.732	0.92
17_W	106_V	0.728	0.92
54_W	141_A	0.722	0.91
294_V	308_D	0.720	0.91
162_N	355_I	0.718	0.91
366_T	370_I	0.718	0.91
142_H	146_G	0.712	0.91
40_A	197_F	0.712	0.91
107_L	110_A	0.712	0.91
340_L	344_D	0.710	0.91
289_V	315_I	0.708	0.91
278_A	342_Y	0.706	0.90
381_A	386_E	0.705	0.90
112_I	171_A	0.704	0.90
184_D	188_S	0.704	0.90
55_V	98_M	0.703	0.90
65_P	68_S	0.703	0.90
293_G	296_S	0.697	0.90
170_V	310_F	0.695	0.90
60_T	73_L	0.693	0.90
75_W	78_L	0.692	0.90
7_V	12_C	0.692	0.90
120_M	370_I	0.692	0.90
49_I	238_A	0.688	0.89
292_W	297_L	0.687	0.89
59_Y	63_F	0.687	0.89
128_F	171_A	0.684	0.89
314_G	318_T	0.683	0.89
120_M	175_L	0.683	0.89
38_S	113_S	0.679	0.89
92_I	96_L	0.678	0.89
360_V	367_F	0.678	0.89
132_W	171_A	0.678	0.89
10_F	14_L	0.676	0.88
136_V	369_I	0.676	0.88
136_V	366_T	0.676	0.88
73_L	76_A	0.675	0.88
88_Y	91_T	0.674	0.88
128_F	366_T	0.673	0.88
45_S	122_F	0.673	0.88
23_L	201_A	0.672	0.88
116_F	370_I	0.671	0.88
123_G	245_W	0.670	0.88
250_K	396_G	0.669	0.88
51_S	106_V	0.669	0.88
39_T	42_H	0.668	0.88
7_V	14_L	0.667	0.88
60_T	64_A	0.667	0.88
266_A	316_G	0.663	0.87
247_I	291_F	0.663	0.87
173_L	177_I	0.663	0.87
196_T	254_L	0.662	0.87
104_F	210_F	0.661	0.87
253_M	257_V	0.660	0.87
244_E	255_G	0.660	0.87
241_I	256_A	0.658	0.87
218_L	222_A	0.658	0.87
287_G	290_C	0.655	0.87
227_I	276_P	0.654	0.87
37_L	397_E	0.653	0.87
122_F	395_H	0.652	0.87
113_S	116_F	0.652	0.87
158_F	225_A	0.648	0.86
156_L	328_A	0.647	0.86
128_F	132_W	0.646	0.86
13_A	103_T	0.645	0.86
179_L	379_L	0.645	0.86
59_Y	75_W	0.645	0.86
332_V	339_G	0.641	0.86
54_W	62_A	0.640	0.86
51_S	231_T	0.640	0.86
181_K	302_G	0.639	0.85
286_G	319_W	0.639	0.85
356_A	359_Y	0.638	0.85
73_L	77_G	0.638	0.85
172_G	176_A	0.638	0.85
364_I	367_F	0.636	0.85
155_A	162_N	0.636	0.85
144_V	151_G	0.634	0.85
255_G	290_C	0.634	0.85
59_Y	97_F	0.631	0.85
281_I	327_F	0.630	0.85
61_L	139_P	0.630	0.85
23_L	107_L	0.629	0.85
298_K	301_F	0.628	0.85
128_F	370_I	0.628	0.85
61_L	73_L	0.627	0.84
166_I	314_G	0.626	0.84
247_I	296_S	0.624	0.84
145_W	163_V	0.622	0.84
175_L	366_T	0.622	0.84
344_D	348_I	0.621	0.84
207_W	264_L	0.620	0.84
392_L	398_K	0.619	0.84
311_G	315_I	0.619	0.84
170_V	362_V	0.618	0.84
48_A	238_A	0.616	0.83
21_P	202_L	0.615	0.83
232_A	286_G	0.613	0.83
268_T	272_G	0.613	0.83
182_R	304_D	0.612	0.83
165_H	313_H	0.611	0.83
66_G	142_H	0.611	0.83
215_A	225_A	0.610	0.83
211_N	229_T	0.609	0.83
19_M	211_N	0.609	0.83
99_M	102_M	0.606	0.82
329_T	342_Y	0.605	0.82
311_G	314_G	0.604	0.82
388_L	392_L	0.604	0.82
47_I	230_N	0.602	0.82
118_E	188_S	0.601	0.82
167_S	358_T	0.600	0.82
144_V	155_A	0.600	0.82
42_H	117_A	0.599	0.82
340_L	345_A	0.599	0.82
116_F	129_S	0.598	0.82
136_V	362_V	0.598	0.82
262_A	290_C	0.597	0.81
98_M	102_M	0.594	0.81
278_A	329_T	0.594	0.81
211_N	214_S	0.594	0.81
347_L	351_Q	0.594	0.81
222_A	225_A	0.592	0.81
105_A	133_A	0.592	0.81
10_F	223_M	0.592	0.81
361_F	364_I	0.589	0.81
150_I	155_A	0.589	0.81
47_I	102_M	0.588	0.80
143_W	361_F	0.588	0.80
122_F	251_P	0.588	0.80
165_H	321_G	0.587	0.80
8_F	215_A	0.585	0.80
210_F	229_T	0.583	0.80
287_G	319_W	0.583	0.80
247_I	292_W	0.583	0.80
10_F	226_F	0.581	0.80
180_G	380_R	0.579	0.79
74_E	78_L	0.578	0.79
127_L	369_I	0.576	0.79
103_T	164_V	0.576	0.79
19_M	203_I	0.576	0.79
35_N	381_A	0.576	0.79
67_N	70_I	0.574	0.79
178_V	363_F	0.572	0.79
112_I	116_F	0.571	0.78
236_G	266_A	0.571	0.78
103_T	226_F	0.569	0.78
116_F	125_F	0.567	0.78
42_H	125_F	0.566	0.78
344_D	347_L	0.566	0.78
298_K	308_D	0.566	0.78
13_A	226_F	0.565	0.78
349_W	356_A	0.564	0.78
74_E	77_G	0.563	0.78
274_V	279_S	0.562	0.77
210_F	268_T	0.561	0.77
46_S	110_A	0.560	0.77
324_T	348_I	0.560	0.77
224_Y	332_V	0.559	0.77
384_E	387_S	0.558	0.77
242_L	245_W	0.558	0.77
243_V	289_V	0.556	0.77
88_Y	94_H	0.554	0.76
62_A	138_T	0.553	0.76
221_V	224_Y	0.552	0.76
92_I	97_F	0.549	0.76
24_A	40_A	0.549	0.76
109_T	133_A	0.548	0.76
44_F	260_A	0.547	0.76
38_S	116_F	0.547	0.76
75_W	80_G	0.546	0.75
189_S	398_K	0.546	0.75
109_T	116_F	0.546	0.75
329_T	332_V	0.545	0.75
47_I	51_S	0.545	0.75
321_G	324_T	0.543	0.75
221_V	225_A	0.538	0.74
285_I	327_F	0.537	0.74
174_V	359_Y	0.536	0.74
46_S	109_T	0.536	0.74
18_L	21_P	0.536	0.74
284_I	287_G	0.536	0.74
23_L	42_H	0.535	0.74
121_R	385_E	0.535	0.74
68_S	152_Q	0.535	0.74
298_K	315_I	0.534	0.74
32_K	35_N	0.534	0.74
90_D	217_T	0.533	0.74
286_G	289_V	0.532	0.74
73_L	81_V	0.532	0.74
350_K	354_A	0.531	0.73
362_V	366_T	0.531	0.73
298_K	310_F	0.531	0.73
112_I	132_W	0.531	0.73
130_V	238_A	0.530	0.73
42_H	116_F	0.530	0.73
386_E	389_G	0.528	0.73
298_K	303_Y	0.527	0.73
366_T	369_I	0.527	0.73
34_K	188_S	0.526	0.73
128_F	373_V	0.524	0.72
319_W	327_F	0.523	0.72
40_A	194_I	0.522	0.72
248_N	291_F	0.521	0.72
178_V	370_I	0.520	0.72
258_S	298_K	0.520	0.72
296_S	301_F	0.519	0.72
77_G	80_G	0.518	0.72
355_I	359_Y	0.518	0.72
130_V	133_A	0.517	0.71
64_A	75_W	0.517	0.71
358_T	362_V	0.517	0.71
170_V	355_I	0.516	0.71
381_A	385_E	0.516	0.71
43_S	107_L	0.516	0.71
200_G	260_A	0.515	0.71
156_L	347_L	0.514	0.71
360_V	363_F	0.514	0.71
165_H	233_A	0.514	0.71
153_L	357_A	0.512	0.71
55_V	277_F	0.510	0.70
252_T	255_G	0.510	0.70
230_N	234_A	0.510	0.70
79_K	83_F	0.510	0.70
121_R	376_F	0.510	0.70
324_T	347_L	0.508	0.70
126_L	245_W	0.508	0.70
43_S	46_S	0.506	0.70
159_A	214_S	0.506	0.70
60_T	72_G	0.505	0.70
182_R	380_R	0.504	0.69
230_N	260_A	0.504	0.69
20_T	110_A	0.504	0.69
174_V	364_I	0.502	0.69
48_A	234_A	0.502	0.69
64_A	142_H	0.502	0.69
130_V	138_T	0.502	0.69
289_V	316_G	0.501	0.69
275_T	342_Y	0.501	0.69
280_I	284_I	0.501	0.69
275_T	279_S	0.500	0.69
169_G	317_G	0.500	0.69

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2b2hA	3	0.9604	100	0.028	Contact Map
1u7gA	3	0.9332	100	0.113	Contact Map
3hd6A	3	0.9332	100	0.271	Contact Map
3b9wA	3	0.8663	100	0.292	Contact Map
4j05A	3	0.7995	40.9	0.968	Contact Map
4xnjA	1	0.505	39.5	0.968	Contact Map
4uvmA	1	0.5025	19.9	0.973	Contact Map
1pw4A	1	0.5173	19.7	0.973	Contact Map
4tphA	2	0.5074	16.8	0.974	Contact Map
1qleD	1	0.052	15.1	0.974	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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