YWQB - BACSU - GREMLIN Contacts

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YWQB - Uncharacterized protein YwqB

UniProt:	P96714	Sequences: MLQNMISKDDVLASAEQLKELLPYNEENVQLIKKALILYRQDSVYRLQAVSPTEVTAYVQDVVPVRVTLNLFVIVKSGCSCPSGRICRHMLAVFLYVYAMFERVGTFTEYWLEREKLEESKELVRRQFQEKVLPNEESLSSWLAFFDSEFSLWQARTPEGSQNMQGLYYGYLSALKKHAPNKPELKSLYQIHSAIAVWLRMFTLIEAGKLNPEQDFYSLNPYVEQLMDTIYSSIDKLKTYALSFALDPFLDKTPDVIRHLLLKEEIFQYERIRVFGEIWSALLSRPKWVAREQEILKKEAGRRFSPELQFGRLHLEFLQKNDDVIFEEADQFPPEALPYTFQWLSEMTAKKDWKRLKTWYQQIEPIAMGYTKLDKPFKEIRDVIGELFLLLNAYVQQTNDQALFERFAAGCLPYTFTEYSHHLYEKKRYAEWIEIHSLVGFSINEMDKMMLKEIAASDPEALIPAYHREVAFFIDQKNRSSYKEAARYLKKLRTLYKKAKKQKVWERYIQLLSSHYKRLRALQEELQKGKLIDGES	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	536 (493)
Sequences:	508 (463)
Seq/√Len:	20.8

BACSU - YWQB

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
479_R	521_A	5.898	1.00
521_A	525_E	5.399	1.00
82_P	88_R	5.344	1.00
214_Q	217_Y	5.121	1.00
31_L	83_S	4.499	1.00
61_D	65_V	4.339	1.00
479_R	525_E	4.291	1.00
321_N	324_V	4.259	1.00
38_L	61_D	4.258	1.00
61_D	82_P	4.255	1.00
61_D	88_R	3.996	1.00
428_R	431_E	3.923	1.00
521_A	524_E	3.914	1.00
112_L	115_E	3.828	1.00
38_L	88_R	3.572	1.00
474_I	485_A	3.493	1.00
479_R	524_E	3.452	1.00
91_L	95_L	3.372	1.00
47_L	93_V	3.072	0.99
65_V	88_R	3.066	0.99
57_A	93_V	2.971	0.99
44_V	59_V	2.783	0.99
34_K	82_P	2.755	0.99
352_D	355_R	2.740	0.99
419_Y	423_L	2.715	0.99
38_L	65_V	2.586	0.98
65_V	82_P	2.577	0.98
483_K	525_E	2.538	0.98
38_L	82_P	2.512	0.98
81_C	87_C	2.502	0.98
81_C	89_H	2.502	0.98
117_L	121_K	2.500	0.98
209_K	215_D	2.499	0.98
79_C	89_H	2.405	0.97
79_C	87_C	2.405	0.97
32_I	95_L	2.400	0.97
474_I	522_L	2.393	0.97
316_E	321_N	2.388	0.97
112_L	116_K	2.334	0.96
61_D	83_S	2.334	0.96
34_K	88_R	2.299	0.96
59_V	67_V	2.294	0.96
69_L	94_F	2.247	0.96
344_L	356_L	2.225	0.95
108_T	112_L	2.189	0.95
477_K	519_L	2.161	0.94
32_I	91_L	2.149	0.94
185_L	190_Q	2.131	0.94
34_K	65_V	2.098	0.93
455_A	495_L	2.088	0.93
379_E	383_V	2.081	0.93
34_K	61_D	2.073	0.93
430_A	458_D	2.072	0.93
55_V	97_V	2.065	0.93
62_V	88_R	2.035	0.92
432_W	450_M	2.031	0.92
519_L	525_E	2.013	0.92
432_W	436_H	1.990	0.92
521_A	528_K	1.972	0.91
525_E	528_K	1.971	0.91
83_S	88_R	1.968	0.91
90_M	93_V	1.962	0.91
501_K	505_W	1.952	0.91
280_S	283_L	1.927	0.90
463_I	492_L	1.914	0.90
360_Y	363_I	1.910	0.90
478_N	481_S	1.905	0.90
34_K	38_L	1.847	0.88
125_R	128_F	1.834	0.88
62_V	65_V	1.819	0.87
209_K	214_Q	1.806	0.87
279_W	283_L	1.802	0.87
38_L	62_V	1.800	0.87
396_Q	399_N	1.795	0.87
479_R	519_L	1.788	0.86
86_I	90_M	1.781	0.86
47_L	57_A	1.776	0.86
512_L	522_L	1.754	0.85
23_P	27_E	1.743	0.85
38_L	83_S	1.735	0.85
316_E	324_V	1.730	0.84
360_Y	364_E	1.719	0.84
81_C	92_A	1.705	0.84
89_H	92_A	1.705	0.84
87_C	92_A	1.705	0.84
44_V	47_L	1.692	0.83
167_L	170_G	1.679	0.83
38_L	63_V	1.677	0.82
388_F	426_K	1.663	0.82
128_F	131_K	1.662	0.82
67_V	93_V	1.656	0.82
347_M	516_Y	1.644	0.81
47_L	96_Y	1.642	0.81
36_L	95_L	1.639	0.81
486_A	525_E	1.622	0.80
62_V	82_P	1.619	0.80
485_A	520_R	1.616	0.80
34_K	83_S	1.604	0.80
79_C	92_A	1.604	0.80
27_E	90_M	1.601	0.79
35_A	38_L	1.522	0.76
186_K	190_Q	1.503	0.75
147_D	200_R	1.500	0.75
432_W	454_I	1.497	0.75
284_S	292_E	1.461	0.73
123_L	132_V	1.455	0.72
474_I	520_R	1.452	0.72
31_L	61_D	1.441	0.72
158_P	215_D	1.439	0.71
363_I	426_K	1.434	0.71
420_S	432_W	1.433	0.71
422_H	426_K	1.428	0.71
161_S	215_D	1.416	0.70
428_R	512_L	1.413	0.70
470_V	485_A	1.410	0.70
470_V	505_W	1.404	0.70
175_L	194_A	1.402	0.69
388_F	422_H	1.396	0.69
520_R	524_E	1.395	0.69
363_I	400_D	1.393	0.69
178_H	190_Q	1.383	0.68
84_G	90_M	1.363	0.67
120_S	131_K	1.359	0.67
93_V	96_Y	1.340	0.66
77_S	90_M	1.329	0.65
31_L	34_K	1.322	0.65
48_Q	66_R	1.310	0.64
192_H	253_T	1.306	0.64
513_S	527_Q	1.296	0.63
432_W	462_L	1.295	0.63
513_S	523_Q	1.293	0.63
392_N	400_D	1.291	0.63
282_L	490_K	1.290	0.63
483_K	521_A	1.288	0.63
275_F	279_W	1.283	0.62
23_P	28_N	1.282	0.62
508_Y	518_R	1.279	0.62
36_L	96_Y	1.278	0.62
247_D	250_L	1.273	0.62
170_G	191_I	1.271	0.62
178_H	325_I	1.270	0.62
410_G	423_L	1.264	0.61
400_D	426_K	1.250	0.60
31_L	88_R	1.244	0.60
209_K	217_Y	1.239	0.60
501_K	504_V	1.236	0.59
27_E	91_L	1.229	0.59
450_M	519_L	1.227	0.59
354_K	502_Q	1.226	0.59
524_E	528_K	1.226	0.59
363_I	388_F	1.223	0.59
29_V	34_K	1.220	0.58
344_L	363_I	1.212	0.58
246_L	250_L	1.205	0.57
168_Y	201_M	1.188	0.56
55_V	358_T	1.185	0.56
205_I	223_V	1.179	0.56
24_Y	32_I	1.176	0.56
112_L	132_V	1.176	0.56
451_L	466_Y	1.168	0.55
107_F	351_K	1.164	0.55
485_A	505_W	1.158	0.54
35_A	44_V	1.156	0.54
486_A	526_L	1.151	0.54
516_Y	519_L	1.147	0.54
386_E	526_L	1.146	0.54
59_V	93_V	1.143	0.53
395_V	399_N	1.142	0.53
214_Q	220_N	1.142	0.53
108_T	115_E	1.129	0.52
466_Y	521_A	1.124	0.52
32_I	36_L	1.123	0.52
517_K	523_Q	1.117	0.52
69_L	392_N	1.114	0.51
485_A	508_Y	1.110	0.51
467_H	492_L	1.107	0.51
44_V	92_A	1.098	0.50
65_V	92_A	1.097	0.50
363_I	519_L	1.096	0.50
158_P	161_S	1.087	0.50
27_E	86_I	1.086	0.50
150_F	519_L	1.085	0.50
95_L	106_T	1.077	0.49
172_L	431_E	1.071	0.49
161_S	214_Q	1.068	0.48
405_E	431_E	1.054	0.47
69_L	77_S	1.054	0.47
477_K	485_A	1.048	0.47
62_V	241_A	1.046	0.47
30_Q	62_V	1.045	0.47
35_A	79_C	1.043	0.47
146_F	314_H	1.041	0.47
64_P	288_W	1.039	0.47
522_L	526_L	1.032	0.46
59_V	79_C	1.025	0.46
316_E	522_L	1.025	0.46
25_N	427_K	1.024	0.46
23_P	32_I	1.023	0.45
72_F	75_V	1.021	0.45
433_I	461_A	1.016	0.45
35_A	59_V	1.014	0.45
35_A	81_C	1.013	0.45
35_A	89_H	1.013	0.45
35_A	87_C	1.013	0.45
235_D	238_K	1.009	0.45
275_F	480_S	1.005	0.44
226_L	230_I	1.005	0.44
401_Q	510_Q	1.002	0.44
345_S	349_A	1.000	0.44
80_S	194_A	1.000	0.44
484_E	517_K	1.000	0.44
356_L	400_D	0.990	0.43
244_F	247_D	0.989	0.43
35_A	482_Y	0.984	0.43
190_Q	209_K	0.981	0.43
479_R	483_K	0.976	0.42
59_V	81_C	0.975	0.42
59_V	89_H	0.975	0.42
59_V	87_C	0.975	0.42
327_E	330_D	0.974	0.42
339_Y	522_L	0.972	0.42
118_E	121_K	0.971	0.42
429_Y	454_I	0.970	0.42
201_M	208_G	0.967	0.42
151_S	272_I	0.966	0.42
285_R	288_W	0.965	0.42
142_W	423_L	0.961	0.41
479_R	528_K	0.956	0.41
395_V	411_C	0.954	0.41
72_F	460_E	0.953	0.41
400_D	500_K	0.952	0.41
223_V	424_Y	0.948	0.41
520_R	523_Q	0.945	0.40
62_V	70_N	0.943	0.40
461_A	470_V	0.942	0.40
161_S	217_Y	0.941	0.40
135_N	149_E	0.941	0.40
79_C	88_R	0.940	0.40
81_C	88_R	0.935	0.40
182_K	490_K	0.924	0.39
142_W	519_L	0.922	0.39
421_H	449_M	0.920	0.39
389_L	425_E	0.919	0.39
234_I	433_I	0.919	0.39
246_L	423_L	0.919	0.39
200_R	205_I	0.918	0.39
47_L	78_G	0.916	0.39
107_F	112_L	0.915	0.38
193_S	209_K	0.914	0.38
340_T	359_W	0.913	0.38
313_L	325_I	0.911	0.38
388_F	391_L	0.910	0.38
116_K	124_V	0.909	0.38
65_V	83_S	0.908	0.38
432_W	458_D	0.906	0.38
482_Y	518_R	0.906	0.38
313_L	317_F	0.905	0.38
109_E	408_A	0.904	0.38
379_E	382_D	0.899	0.38
378_K	382_D	0.898	0.37
167_L	171_Y	0.893	0.37
124_V	127_Q	0.891	0.37
234_I	297_K	0.890	0.37
245_A	249_F	0.886	0.37
323_D	352_D	0.886	0.37
95_L	432_W	0.884	0.37
316_E	489_L	0.884	0.37
266_I	269_Y	0.884	0.37
125_R	131_K	0.883	0.37
243_S	246_L	0.882	0.36
315_L	319_Q	0.882	0.36
450_M	516_Y	0.881	0.36
71_L	128_F	0.881	0.36
167_L	466_Y	0.879	0.36
94_F	98_Y	0.877	0.36
273_R	509_I	0.876	0.36
86_I	91_L	0.874	0.36
76_K	490_K	0.873	0.36
62_V	68_T	0.871	0.36
250_L	253_T	0.866	0.35
88_R	91_L	0.865	0.35
27_E	31_L	0.864	0.35
250_L	255_D	0.863	0.35
492_L	508_Y	0.861	0.35
28_N	32_I	0.859	0.35
304_F	365_P	0.858	0.35
324_V	523_Q	0.852	0.35
519_L	523_Q	0.852	0.35
508_Y	512_L	0.851	0.35
65_V	79_C	0.849	0.34
125_R	130_E	0.845	0.34
191_I	307_E	0.844	0.34
49_A	53_T	0.843	0.34
197_V	226_L	0.840	0.34
120_S	125_R	0.838	0.34
505_W	519_L	0.837	0.34
519_L	522_L	0.836	0.34
433_I	505_W	0.835	0.34
312_R	419_Y	0.834	0.34
388_F	400_D	0.834	0.34
65_V	87_C	0.834	0.34
65_V	89_H	0.834	0.34
65_V	81_C	0.834	0.34
318_L	351_K	0.834	0.34
149_E	204_L	0.832	0.33
188_L	419_Y	0.831	0.33
459_P	524_E	0.830	0.33
491_K	494_T	0.830	0.33
488_Y	520_R	0.830	0.33
124_V	128_F	0.827	0.33
93_V	361_Q	0.826	0.33
296_L	491_K	0.822	0.33
167_L	174_A	0.817	0.33
289_V	292_E	0.817	0.33
114_R	254_P	0.816	0.33
432_W	467_H	0.816	0.33
249_F	253_T	0.815	0.32
460_E	501_K	0.814	0.32
275_F	292_E	0.811	0.32
174_A	185_L	0.810	0.32
208_G	215_D	0.809	0.32
51_S	121_K	0.807	0.32
93_V	459_P	0.807	0.32
23_P	31_L	0.805	0.32
501_K	508_Y	0.801	0.32
462_L	495_L	0.799	0.32
340_T	432_W	0.798	0.31
28_N	86_I	0.797	0.31
367_A	373_L	0.797	0.31
320_K	323_D	0.794	0.31
226_L	233_S	0.793	0.31
466_Y	479_R	0.793	0.31
286_P	293_Q	0.790	0.31
250_L	499_A	0.790	0.31
327_E	365_P	0.786	0.31
23_P	95_L	0.785	0.31
59_V	92_A	0.780	0.30
466_Y	523_Q	0.779	0.30
329_A	469_E	0.778	0.30
169_Y	228_D	0.777	0.30
230_I	234_I	0.776	0.30
56_T	93_V	0.776	0.30
344_L	519_L	0.776	0.30
166_G	484_E	0.775	0.30
39_Y	355_R	0.774	0.30
124_V	240_Y	0.773	0.30
111_W	115_E	0.772	0.30
297_K	457_S	0.770	0.30
70_N	80_S	0.768	0.30
167_L	505_W	0.768	0.30
480_S	483_K	0.768	0.30
471_A	511_L	0.766	0.30
35_A	88_R	0.766	0.30
127_Q	313_L	0.765	0.30
332_F	489_L	0.762	0.29
491_K	505_W	0.761	0.29
55_V	70_N	0.761	0.29
356_L	383_V	0.759	0.29
341_F	344_L	0.757	0.29
39_Y	489_L	0.754	0.29
76_K	122_E	0.754	0.29
38_L	44_V	0.754	0.29
453_E	466_Y	0.753	0.29
250_L	359_W	0.753	0.29
63_V	489_L	0.753	0.29
118_E	197_V	0.752	0.29
107_F	294_E	0.752	0.29
412_L	492_L	0.750	0.29
164_M	168_Y	0.750	0.29
61_D	91_L	0.749	0.29
80_S	410_G	0.748	0.29
400_D	403_L	0.748	0.29
171_Y	174_A	0.748	0.29
119_E	128_F	0.747	0.29
86_I	209_K	0.746	0.29
52_P	300_A	0.744	0.28
118_E	130_E	0.743	0.28
59_V	82_P	0.742	0.28
65_V	161_S	0.742	0.28
276_G	279_W	0.742	0.28
153_W	170_G	0.741	0.28
44_V	79_C	0.739	0.28
315_L	491_K	0.738	0.28
286_P	427_K	0.737	0.28
432_W	519_L	0.736	0.28
470_V	522_L	0.735	0.28
59_V	65_V	0.735	0.28
222_Y	289_V	0.734	0.28
424_Y	432_W	0.732	0.28
79_C	82_P	0.731	0.28
490_K	524_E	0.730	0.28
194_A	238_K	0.729	0.28
363_I	422_H	0.729	0.28
201_M	289_V	0.728	0.28
488_Y	491_K	0.726	0.28
351_K	503_K	0.722	0.27
337_L	342_Q	0.721	0.27
201_M	209_K	0.720	0.27
148_S	427_K	0.718	0.27
247_D	254_P	0.717	0.27
23_P	512_L	0.716	0.27
146_F	526_L	0.716	0.27
450_M	454_I	0.716	0.27
473_F	476_Q	0.715	0.27
69_L	510_Q	0.715	0.27
495_L	508_Y	0.713	0.27
93_V	358_T	0.711	0.27
145_F	454_I	0.711	0.27
169_Y	448_K	0.711	0.27
92_A	482_Y	0.709	0.27
412_L	438_L	0.708	0.27
485_A	519_L	0.707	0.27
328_E	333_P	0.707	0.27
244_F	248_P	0.704	0.26
387_L	488_Y	0.702	0.26
277_E	326_F	0.701	0.26
110_Y	327_E	0.701	0.26
419_Y	487_R	0.701	0.26
433_I	463_I	0.700	0.26
343_W	432_W	0.698	0.26
88_R	92_A	0.697	0.26
492_L	523_Q	0.696	0.26
113_E	408_A	0.696	0.26
134_P	257_I	0.695	0.26
44_V	89_H	0.695	0.26
44_V	81_C	0.695	0.26
44_V	87_C	0.695	0.26
164_M	171_Y	0.695	0.26
310_F	345_S	0.694	0.26
408_A	422_H	0.690	0.26
190_Q	198_W	0.689	0.26
311_G	485_A	0.689	0.26
429_Y	432_W	0.688	0.26
31_L	95_L	0.688	0.26
110_Y	457_S	0.687	0.26
275_F	520_R	0.683	0.25
362_Q	407_F	0.683	0.25
420_S	447_D	0.682	0.25
82_P	89_H	0.679	0.25
82_P	87_C	0.679	0.25
175_L	198_W	0.678	0.25
253_T	257_I	0.677	0.25
123_L	432_W	0.675	0.25
293_Q	297_K	0.675	0.25
359_W	481_S	0.674	0.25
516_Y	522_L	0.673	0.25
477_K	481_S	0.671	0.25
195_I	198_W	0.669	0.25
35_A	61_D	0.666	0.24
304_F	320_K	0.666	0.24
108_T	116_K	0.666	0.24
417_T	449_M	0.665	0.24
446_M	490_K	0.664	0.24
232_S	510_Q	0.663	0.24
47_L	517_K	0.661	0.24
128_F	132_V	0.660	0.24
49_A	55_V	0.660	0.24
139_L	500_K	0.660	0.24
146_F	324_V	0.660	0.24
77_S	84_G	0.659	0.24
30_Q	33_K	0.659	0.24
432_W	451_L	0.657	0.24
36_L	41_Q	0.657	0.24
404_F	407_F	0.657	0.24
285_R	289_V	0.656	0.24
296_L	299_E	0.653	0.24
226_L	237_L	0.653	0.24
26_E	34_K	0.653	0.24
289_V	293_Q	0.652	0.24
100_M	184_E	0.650	0.24
246_L	249_F	0.649	0.24
169_Y	172_L	0.648	0.24
433_I	454_I	0.648	0.24
415_T	434_E	0.647	0.24
247_D	289_V	0.647	0.24
300_A	303_R	0.646	0.23
344_L	367_A	0.645	0.23
466_Y	525_E	0.644	0.23
454_I	461_A	0.644	0.23
169_Y	281_A	0.643	0.23
90_M	94_F	0.643	0.23
470_V	516_Y	0.643	0.23
61_D	73_V	0.642	0.23
82_P	214_Q	0.641	0.23
316_E	447_D	0.638	0.23
53_T	71_L	0.638	0.23
90_M	383_V	0.637	0.23
94_F	522_L	0.637	0.23
23_P	86_I	0.636	0.23
146_F	155_A	0.636	0.23
111_W	249_F	0.635	0.23
23_P	35_A	0.634	0.23
182_K	185_L	0.633	0.23
290_A	354_K	0.632	0.23
117_L	129_Q	0.631	0.23
120_S	123_L	0.631	0.23
198_W	298_K	0.631	0.23
444_N	510_Q	0.631	0.23
402_A	458_D	0.630	0.23
55_V	68_T	0.630	0.23
380_I	384_I	0.630	0.23
474_I	505_W	0.630	0.23
369_G	427_K	0.628	0.23
347_M	355_R	0.627	0.23
388_F	408_A	0.627	0.23
264_E	319_Q	0.626	0.23
458_D	471_A	0.625	0.23
466_Y	491_K	0.625	0.23
440_G	486_A	0.624	0.22
52_P	352_D	0.624	0.22
65_V	91_L	0.624	0.22
27_E	32_I	0.624	0.22
160_G	423_L	0.623	0.22
486_A	518_R	0.623	0.22
247_D	287_K	0.623	0.22
60_Q	64_P	0.623	0.22
268_Q	271_R	0.622	0.22
296_L	301_G	0.622	0.22
228_D	232_S	0.620	0.22
23_P	90_M	0.620	0.22
437_S	461_A	0.619	0.22
94_F	347_M	0.619	0.22
490_K	528_K	0.619	0.22
93_V	129_Q	0.618	0.22
505_W	517_K	0.618	0.22
328_E	373_L	0.618	0.22
77_S	518_R	0.616	0.22
466_Y	470_V	0.616	0.22
69_L	230_I	0.615	0.22
91_L	356_L	0.615	0.22
55_V	69_L	0.615	0.22
228_D	323_D	0.615	0.22
138_S	265_E	0.613	0.22
299_E	324_V	0.613	0.22
264_E	268_Q	0.612	0.22
315_L	465_A	0.612	0.22
474_I	512_L	0.612	0.22
395_V	400_D	0.610	0.22
32_I	38_L	0.610	0.22
67_V	82_P	0.609	0.22
222_Y	234_I	0.609	0.22
327_E	331_Q	0.607	0.22
63_V	88_R	0.607	0.22
190_Q	193_S	0.606	0.22
477_K	488_Y	0.606	0.22
217_Y	519_L	0.606	0.22
75_V	102_E	0.606	0.22
120_S	513_S	0.605	0.22
77_S	432_W	0.604	0.22
292_E	490_K	0.604	0.22
40_R	113_E	0.603	0.22
111_W	118_E	0.602	0.21
271_R	475_D	0.602	0.21
157_T	445_E	0.601	0.21
182_K	526_L	0.601	0.21
35_A	92_A	0.601	0.21
256_V	259_H	0.601	0.21
99_A	228_D	0.600	0.21
35_A	67_V	0.599	0.21
39_Y	234_I	0.598	0.21
77_S	94_F	0.597	0.21
225_Q	239_T	0.596	0.21
120_S	132_V	0.596	0.21
108_T	518_R	0.596	0.21
37_I	460_E	0.596	0.21
163_N	174_A	0.595	0.21
472_F	476_Q	0.594	0.21
397_Q	504_V	0.593	0.21
400_D	404_F	0.593	0.21
37_I	41_Q	0.592	0.21
240_Y	510_Q	0.592	0.21
111_W	463_I	0.591	0.21
45_Y	58_Y	0.591	0.21
93_V	366_I	0.591	0.21
128_F	344_L	0.590	0.21
436_H	447_D	0.590	0.21
27_E	95_L	0.590	0.21
198_W	202_F	0.589	0.21
124_V	224_E	0.589	0.21
185_L	193_S	0.588	0.21
28_N	85_R	0.588	0.21
73_V	392_N	0.587	0.21
389_L	517_K	0.586	0.21
150_F	408_A	0.586	0.21
196_A	200_R	0.586	0.21
130_E	236_K	0.585	0.21
411_C	414_Y	0.585	0.21
126_R	510_Q	0.585	0.21
33_K	487_R	0.584	0.21
43_S	523_Q	0.583	0.21
95_L	420_S	0.581	0.21
87_C	482_Y	0.579	0.20
89_H	482_Y	0.579	0.20
81_C	482_Y	0.579	0.20
458_D	461_A	0.578	0.20
508_Y	519_L	0.577	0.20
74_I	290_A	0.577	0.20
238_K	246_L	0.577	0.20
126_R	236_K	0.577	0.20
164_M	214_Q	0.577	0.20
252_K	257_I	0.575	0.20
117_L	120_S	0.574	0.20
367_A	454_I	0.572	0.20
207_A	345_S	0.572	0.20
323_D	512_L	0.571	0.20
69_L	341_F	0.571	0.20
285_R	346_E	0.570	0.20
256_V	288_W	0.570	0.20
108_T	111_W	0.570	0.20
45_Y	78_G	0.569	0.20
41_Q	150_F	0.569	0.20
34_K	62_V	0.568	0.20
104_V	192_H	0.566	0.20
94_F	525_E	0.566	0.20
73_V	183_P	0.565	0.20
28_N	94_F	0.562	0.20
187_S	191_I	0.562	0.20
432_W	505_W	0.562	0.20
232_S	268_Q	0.561	0.20
195_I	250_L	0.561	0.20
70_N	290_A	0.561	0.20
79_C	482_Y	0.560	0.20
372_K	503_K	0.560	0.20
286_P	290_A	0.560	0.20
165_Q	215_D	0.559	0.20
209_K	516_Y	0.559	0.20
33_K	526_L	0.558	0.20
254_P	275_F	0.558	0.20
122_E	490_K	0.557	0.20
113_E	510_Q	0.557	0.20
347_M	523_Q	0.556	0.19
320_K	328_E	0.555	0.19
199_L	397_Q	0.554	0.19
462_L	512_L	0.554	0.19
424_Y	485_A	0.552	0.19
419_Y	466_Y	0.552	0.19
71_L	80_S	0.551	0.19
44_V	186_K	0.550	0.19
167_L	204_L	0.550	0.19
60_Q	348_T	0.549	0.19
182_K	189_Y	0.548	0.19
77_S	512_L	0.547	0.19
235_D	304_F	0.547	0.19
318_L	414_Y	0.543	0.19
293_Q	312_R	0.542	0.19
45_Y	507_R	0.541	0.19
59_V	88_R	0.540	0.19
35_A	39_Y	0.540	0.19
28_N	33_K	0.539	0.19
452_K	490_K	0.539	0.19
434_E	437_S	0.539	0.19
364_E	411_C	0.538	0.19
35_A	91_L	0.537	0.19
148_S	401_Q	0.537	0.19
434_E	462_L	0.537	0.19
477_K	505_W	0.536	0.19
355_R	419_Y	0.536	0.19
23_P	94_F	0.535	0.19
51_S	54_E	0.535	0.19
61_D	79_C	0.534	0.19
478_N	491_K	0.533	0.19
229_T	411_C	0.531	0.18
470_V	519_L	0.530	0.18
24_Y	478_N	0.530	0.18
466_Y	488_Y	0.530	0.18
425_E	518_R	0.529	0.18
359_W	362_Q	0.529	0.18
73_V	78_G	0.528	0.18
353_W	462_L	0.528	0.18
67_V	298_K	0.528	0.18
424_Y	427_K	0.528	0.18
208_G	219_L	0.528	0.18
65_V	526_L	0.527	0.18
395_V	398_T	0.527	0.18
429_Y	463_I	0.527	0.18
136_E	351_K	0.527	0.18
404_F	426_K	0.527	0.18
181_N	185_L	0.527	0.18
316_E	461_A	0.526	0.18
161_S	222_Y	0.526	0.18
437_S	464_P	0.525	0.18
463_I	504_V	0.525	0.18
108_T	224_E	0.525	0.18
157_T	215_D	0.524	0.18
84_G	363_I	0.524	0.18
216_F	219_L	0.524	0.18
205_I	208_G	0.524	0.18
126_R	409_A	0.523	0.18
171_Y	209_K	0.522	0.18
121_K	132_V	0.522	0.18
194_A	386_E	0.521	0.18
142_W	478_N	0.521	0.18
504_V	512_L	0.521	0.18
266_I	422_H	0.520	0.18
142_W	464_P	0.520	0.18
94_F	400_D	0.519	0.18
315_L	318_L	0.519	0.18
377_F	380_I	0.518	0.18
481_S	508_Y	0.518	0.18
488_Y	524_E	0.516	0.18
158_P	209_K	0.516	0.18
454_I	505_W	0.515	0.18
516_Y	521_A	0.514	0.18
391_L	450_M	0.512	0.18
82_P	93_V	0.512	0.18
323_D	368_M	0.511	0.18
61_D	81_C	0.510	0.18
61_D	89_H	0.510	0.18
61_D	87_C	0.510	0.18
296_L	303_R	0.510	0.18
189_Y	419_Y	0.510	0.18
391_L	471_A	0.509	0.18
411_C	427_K	0.509	0.18
400_D	522_L	0.509	0.18
106_T	308_L	0.508	0.18
436_H	454_I	0.508	0.18
298_K	398_T	0.508	0.18
69_L	321_N	0.508	0.18
282_L	355_R	0.508	0.18
463_I	476_Q	0.507	0.18
419_Y	523_Q	0.505	0.17
42_D	78_G	0.505	0.17
123_L	462_L	0.505	0.17
343_W	362_Q	0.504	0.17
29_V	80_S	0.504	0.17
352_D	462_L	0.504	0.17
215_D	466_Y	0.504	0.17
114_R	249_F	0.504	0.17
338_P	401_Q	0.504	0.17
95_L	462_L	0.504	0.17
237_L	430_A	0.504	0.17
226_L	495_L	0.504	0.17
137_E	427_K	0.503	0.17
339_Y	441_F	0.502	0.17
158_P	214_Q	0.502	0.17
31_L	167_L	0.501	0.17
67_V	79_C	0.501	0.17
294_E	430_A	0.500	0.17
122_E	135_N	0.500	0.17
158_P	217_Y	0.500	0.17

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4jsnB	1	0.4422	96.1	0.937	Contact Map
2vq2A	2	0.3881	95.9	0.938	Contact Map
4g26A	1	0.4067	95.4	0.94	Contact Map
2ho1A	2	0.3937	94.5	0.943	Contact Map
4e6hA	2	0.7425	94.5	0.943	Contact Map
4ja7A	1	0.3993	94.4	0.943	Contact Map
4kvmA	3	0.4701	94.1	0.944	Contact Map
3uq3A	1	0.4067	93.2	0.946	Contact Map
4r7sA	1	0.4608	93.2	0.946	Contact Map
2q7fA	1	0.3451	93.2	0.946	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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