YDCQ - BACSU - GREMLIN Contacts

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YDCQ - Ftsk domain-containing protein YdcQ

UniProt:	P96634	Sequences: MSDFLNKRFWKYRGKRIRPYMRNNVKLAGAIIFVPVFLLSMFLFWREQLIHFDLSQVIKNFEWNVPLIIKSVLCSVLIAVGSIVASYFLLFDSYKKILHRQKIAKMIFSNKFYEKENVKVRKIFSNETDSKEKITYFPRMYYQVKNNHIYIRIAMDMSRFQNRFLDLGKDLENGLFCDLVDKQMEEGFVCFKLLYDVKKNRISIDDAVAENGVLPLMKHISWQFDKLPHMLIAGGTGGGKTYFMLTIIKACVGLGADVRILDPKNADLADLEEVLPKKVYSQKNGILMCLRKSVDGMMERMDEMKQMSNYKTGENYAYLGLKPVFIFFDEYVAFMDLLDMKERNEALSYMKQLVMLGRQAGYFLVLGAQRPDAKYLADGIRDQFSFRVSLGLMSDTGYGMMFGDVEKAYVNKKETGRGYANVGTGSVLEFYSPIVPKGYDFMSSIKNALVGVEGAQATAVASGSVSDQTASGEGVSEANG	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	480 (428)
Sequences:	3311 (1886)
Seq/√Len:	91.2

ECOLI - FTSK
BACSU - YDCQ SFTA SP3E YUKB

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
293_S	326_I	5.467	1.00
249_K	441_F	4.175	1.00
104_A	440_D	3.972	1.00
56_Q	59_K	3.749	1.00
105_K	205_D	3.516	1.00
248_I	260_I	2.900	1.00
106_M	206_D	2.809	1.00
299_E	303_E	2.801	1.00
130_S	135_T	2.791	1.00
85_A	88_F	2.778	1.00
63_W	66_P	2.767	1.00
247_I	365_V	2.702	1.00
52_F	55_S	2.689	1.00
303_E	321_L	2.667	1.00
74_C	85_A	2.650	1.00
135_T	156_D	2.579	1.00
71_S	78_I	2.549	1.00
214_L	218_K	2.513	1.00
313_G	323_P	2.456	1.00
73_L	88_F	2.452	1.00
121_R	151_I	2.448	1.00
67_L	71_S	2.445	1.00
395_D	405_V	2.444	1.00
373_A	400_M	2.420	1.00
312_T	315_N	2.414	1.00
326_I	362_Y	2.406	1.00
248_I	327_F	2.383	1.00
54_L	58_I	2.334	1.00
298_M	356_L	2.307	1.00
63_W	67_L	2.284	1.00
155_M	164_F	2.221	1.00
444_S	448_A	2.207	1.00
251_C	256_A	2.181	1.00
67_L	74_C	2.161	1.00
71_S	74_C	2.134	1.00
164_F	189_V	2.126	1.00
230_M	388_V	2.094	1.00
442_M	446_K	2.048	1.00
63_W	71_S	2.035	1.00
126_N	139_R	2.019	1.00
351_K	379_G	2.016	1.00
339_D	344_N	2.008	1.00
47_E	50_I	2.000	1.00
100_R	208_V	1.993	1.00
70_K	78_I	1.992	1.00
222_W	420_A	1.988	1.00
66_P	71_S	1.985	1.00
62_E	66_P	1.983	1.00
204_I	208_V	1.977	1.00
243_F	247_I	1.974	1.00
45_W	49_L	1.970	1.00
127_E	131_K	1.950	1.00
42_F	49_L	1.940	1.00
235_G	238_G	1.925	1.00
66_P	78_I	1.923	1.00
66_P	70_K	1.921	1.00
255_G	320_G	1.908	1.00
115_K	119_K	1.889	1.00
41_M	44_F	1.887	1.00
199_K	415_T	1.856	1.00
249_K	435_V	1.847	1.00
243_F	388_V	1.821	1.00
63_W	70_K	1.817	1.00
66_P	74_C	1.812	1.00
30_A	37_F	1.800	1.00
74_C	78_I	1.799	1.00
439_Y	443_S	1.792	1.00
67_L	73_L	1.775	1.00
222_W	227_L	1.768	1.00
85_A	89_L	1.762	1.00
265_N	356_L	1.757	1.00
123_I	127_E	1.744	1.00
42_F	50_I	1.724	1.00
211_N	388_V	1.715	1.00
328_F	331_Y	1.710	1.00
74_C	88_F	1.706	1.00
67_L	70_K	1.690	1.00
296_G	299_E	1.681	1.00
44_F	49_L	1.668	1.00
123_I	126_N	1.639	1.00
74_C	81_G	1.634	1.00
304_M	360_A	1.616	1.00
122_K	142_Y	1.598	1.00
75_S	78_I	1.586	1.00
62_E	73_L	1.584	1.00
76_V	80_V	1.571	1.00
55_S	58_I	1.570	1.00
99_H	444_S	1.563	1.00
152_R	186_E	1.561	1.00
243_F	246_T	1.551	1.00
66_P	73_L	1.539	1.00
37_F	41_M	1.518	1.00
71_S	75_S	1.512	1.00
125_S	171_L	1.511	1.00
204_I	435_V	1.509	1.00
443_S	447_N	1.502	1.00
37_F	43_L	1.493	1.00
52_F	67_L	1.491	1.00
121_R	197_V	1.470	1.00
35_P	39_L	1.470	1.00
80_V	87_Y	1.466	1.00
254_L	257_D	1.465	1.00
67_L	75_S	1.463	1.00
230_M	365_V	1.460	1.00
119_K	123_I	1.438	0.99
273_E	446_K	1.422	0.99
331_Y	350_M	1.419	0.99
107_I	203_S	1.418	0.99
126_N	138_P	1.410	0.99
30_A	33_F	1.405	0.99
74_C	91_F	1.399	0.99
70_K	74_C	1.386	0.99
444_S	447_N	1.385	0.99
260_I	327_F	1.379	0.99
265_N	302_D	1.377	0.99
64_N	71_S	1.371	0.99
118_V	122_K	1.369	0.99
220_I	430_F	1.364	0.99
280_Y	289_C	1.363	0.99
67_L	78_I	1.359	0.99
33_F	40_S	1.348	0.99
328_F	366_L	1.344	0.99
70_K	81_G	1.331	0.99
70_K	87_Y	1.331	0.99
206_D	213_V	1.320	0.99
43_L	47_E	1.311	0.99
88_F	91_F	1.310	0.99
46_R	50_I	1.305	0.99
353_L	357_G	1.304	0.99
302_D	306_Q	1.298	0.99
39_L	43_L	1.286	0.99
171_L	174_G	1.280	0.99
64_N	68_I	1.273	0.99
31_I	38_L	1.270	0.99
46_R	49_L	1.270	0.99
74_C	77_L	1.268	0.99
251_C	325_F	1.257	0.99
162_N	166_D	1.251	0.98
128_T	171_L	1.251	0.98
73_L	87_Y	1.251	0.98
85_A	91_F	1.241	0.98
40_S	44_F	1.240	0.98
33_F	37_F	1.236	0.98
44_F	50_I	1.231	0.98
42_F	47_E	1.231	0.98
125_S	191_F	1.229	0.98
73_L	77_L	1.226	0.98
73_L	85_A	1.225	0.98
31_I	45_W	1.224	0.98
71_S	85_A	1.219	0.98
67_L	88_F	1.215	0.98
67_L	81_G	1.211	0.98
73_L	90_L	1.207	0.98
90_L	94_Y	1.206	0.98
309_N	319_L	1.203	0.98
38_L	45_W	1.199	0.98
63_W	78_I	1.198	0.98
292_K	457_A	1.187	0.98
30_A	44_F	1.180	0.98
209_A	365_V	1.179	0.98
140_M	188_F	1.179	0.98
58_I	70_K	1.178	0.98
82_S	85_A	1.175	0.98
85_A	93_S	1.175	0.98
74_C	90_L	1.166	0.98
174_G	187_G	1.166	0.98
64_N	67_L	1.165	0.98
31_I	35_P	1.164	0.98
294_V	298_M	1.163	0.98
41_M	49_L	1.161	0.98
88_F	93_S	1.157	0.97
388_V	418_G	1.153	0.97
90_L	93_S	1.152	0.97
69_I	73_L	1.147	0.97
32_I	36_V	1.134	0.97
226_K	415_T	1.126	0.97
77_L	93_S	1.119	0.97
176_F	187_G	1.117	0.97
117_N	197_V	1.111	0.97
87_Y	90_L	1.107	0.97
78_I	85_A	1.105	0.97
64_N	70_K	1.101	0.97
51_H	60_N	1.101	0.97
73_L	84_V	1.101	0.97
331_Y	335_M	1.099	0.97
41_M	47_E	1.094	0.96
73_L	91_F	1.093	0.96
35_P	42_F	1.091	0.96
81_G	85_A	1.088	0.96
41_M	45_W	1.076	0.96
61_F	64_N	1.072	0.96
140_M	154_A	1.069	0.96
293_S	362_Y	1.069	0.96
105_K	206_D	1.067	0.96
33_F	41_M	1.061	0.96
35_P	45_W	1.059	0.96
31_I	34_V	1.058	0.96
93_S	96_K	1.053	0.96
397_G	400_M	1.053	0.96
45_W	48_Q	1.052	0.96
137_F	153_I	1.050	0.95
307_M	316_Y	1.042	0.95
155_M	159_R	1.037	0.95
62_E	69_I	1.035	0.95
68_I	84_V	1.034	0.95
74_C	87_Y	1.031	0.95
179_L	182_K	1.026	0.95
286_I	294_V	1.024	0.95
85_A	90_L	1.021	0.95
62_E	70_K	1.020	0.95
67_L	89_L	1.015	0.95
87_Y	94_Y	1.015	0.95
463_G	466_S	1.015	0.95
455_A	459_A	1.011	0.94
331_Y	366_L	1.010	0.94
147_N	431_Y	1.006	0.94
309_N	315_N	1.001	0.94
104_A	437_K	0.999	0.94
63_W	87_Y	0.994	0.94
74_C	89_L	0.993	0.94
389_S	396_T	0.993	0.94
404_D	427_V	0.990	0.94
106_M	203_S	0.989	0.94
229_H	236_T	0.986	0.94
72_V	75_S	0.984	0.94
201_R	415_T	0.978	0.93
80_V	91_F	0.978	0.93
203_S	206_D	0.977	0.93
258_V	325_F	0.976	0.93
70_K	77_L	0.967	0.93
122_K	139_R	0.965	0.93
62_E	67_L	0.965	0.93
125_S	169_K	0.964	0.93
45_W	50_I	0.962	0.93
445_I	448_A	0.958	0.93
70_K	75_S	0.955	0.93
261_L	286_I	0.954	0.93
455_A	458_T	0.949	0.92
53_D	59_K	0.938	0.92
336_D	355_M	0.928	0.91
70_K	92_D	0.925	0.91
73_L	93_S	0.922	0.91
89_L	92_D	0.920	0.91
37_F	50_I	0.919	0.91
456_Q	459_A	0.917	0.91
71_S	84_V	0.916	0.91
55_S	59_K	0.914	0.91
86_S	90_L	0.911	0.91
293_S	353_L	0.906	0.90
244_M	331_Y	0.905	0.90
118_V	144_V	0.902	0.90
457_A	461_A	0.902	0.90
77_L	80_V	0.898	0.90
373_A	397_G	0.895	0.90
54_L	60_N	0.893	0.90
51_H	55_S	0.893	0.90
118_V	142_Y	0.891	0.90
243_F	390_L	0.890	0.90
74_C	86_S	0.889	0.90
31_I	39_L	0.888	0.90
78_I	90_L	0.887	0.90
37_F	49_L	0.886	0.89
75_S	87_Y	0.885	0.89
295_D	299_E	0.882	0.89
43_L	49_L	0.880	0.89
83_I	88_F	0.879	0.89
456_Q	460_V	0.875	0.89
42_F	45_W	0.875	0.89
270_D	442_M	0.875	0.89
78_I	81_G	0.873	0.89
75_S	80_V	0.871	0.89
440_D	443_S	0.867	0.88
127_E	130_S	0.866	0.88
69_I	77_L	0.866	0.88
259_R	293_S	0.864	0.88
295_D	356_L	0.862	0.88
66_P	75_S	0.858	0.88
39_L	47_E	0.857	0.88
232_I	430_F	0.854	0.88
446_K	453_E	0.854	0.88
37_F	44_F	0.853	0.88
460_V	465_V	0.851	0.88
70_K	93_S	0.851	0.88
147_N	199_K	0.849	0.87
235_G	391_G	0.849	0.87
312_T	351_K	0.848	0.87
67_L	85_A	0.848	0.87
60_N	63_W	0.845	0.87
84_V	88_F	0.845	0.87
66_P	69_I	0.844	0.87
60_N	67_L	0.843	0.87
78_I	82_S	0.839	0.87
63_W	74_C	0.833	0.86
71_S	89_L	0.832	0.86
161_Q	182_K	0.831	0.86
67_L	87_Y	0.829	0.86
66_P	80_V	0.826	0.86
259_R	277_K	0.826	0.86
34_V	39_L	0.825	0.86
68_I	73_L	0.825	0.86
61_F	66_P	0.823	0.86
61_F	76_V	0.823	0.86
30_A	40_S	0.822	0.86
30_A	41_M	0.819	0.85
51_H	59_K	0.817	0.85
97_I	448_A	0.817	0.85
121_R	124_F	0.816	0.85
62_E	65_V	0.808	0.85
55_S	66_P	0.808	0.85
37_F	40_S	0.805	0.84
79_A	83_I	0.804	0.84
45_W	51_H	0.802	0.84
35_P	44_F	0.799	0.84
366_L	384_F	0.799	0.84
87_Y	91_F	0.799	0.84
54_L	57_V	0.798	0.84
78_I	87_Y	0.796	0.84
73_L	76_V	0.791	0.83
34_V	38_L	0.789	0.83
311_K	438_G	0.787	0.83
128_T	131_K	0.787	0.83
52_F	58_I	0.786	0.83
87_Y	96_K	0.785	0.83
68_I	87_Y	0.785	0.83
126_N	137_F	0.785	0.83
64_N	73_L	0.784	0.83
73_L	80_V	0.783	0.83
291_R	349_Y	0.782	0.83
177_C	181_D	0.780	0.83
373_A	396_T	0.776	0.82
61_F	65_V	0.775	0.82
51_H	54_L	0.774	0.82
67_L	77_L	0.774	0.82
65_V	87_Y	0.773	0.82
64_N	80_V	0.773	0.82
71_S	82_S	0.773	0.82
169_K	181_D	0.772	0.82
71_S	81_G	0.768	0.82
70_K	90_L	0.767	0.81
55_S	70_K	0.766	0.81
54_L	67_L	0.765	0.81
63_W	68_I	0.765	0.81
64_N	81_G	0.765	0.81
98_L	103_I	0.764	0.81
66_P	87_Y	0.764	0.81
58_I	73_L	0.763	0.81
84_V	91_F	0.762	0.81
44_F	47_E	0.759	0.81
64_N	90_L	0.758	0.81
75_S	88_F	0.757	0.81
222_W	422_V	0.757	0.81
36_V	40_S	0.757	0.81
31_I	41_M	0.756	0.81
265_N	305_K	0.756	0.81
266_A	304_M	0.756	0.81
55_S	67_L	0.754	0.80
77_L	85_A	0.753	0.80
75_S	91_F	0.752	0.80
183_Q	188_F	0.749	0.80
92_D	96_K	0.748	0.80
445_I	457_A	0.748	0.80
74_C	82_S	0.747	0.80
53_D	58_I	0.746	0.80
48_Q	52_F	0.745	0.80
75_S	82_S	0.732	0.78
117_N	120_V	0.731	0.78
35_P	41_M	0.731	0.78
41_M	54_L	0.731	0.78
87_Y	93_S	0.729	0.78
53_D	56_Q	0.729	0.78
179_L	189_V	0.728	0.78
454_G	458_T	0.727	0.78
161_Q	189_V	0.725	0.78
89_L	93_S	0.722	0.77
119_K	142_Y	0.722	0.77
268_L	390_L	0.721	0.77
66_P	76_V	0.720	0.77
73_L	82_S	0.720	0.77
339_D	351_K	0.720	0.77
71_S	88_F	0.719	0.77
31_I	46_R	0.718	0.77
66_P	82_S	0.715	0.77
70_K	73_L	0.715	0.77
131_K	157_M	0.714	0.77
52_F	60_N	0.713	0.77
92_D	95_K	0.712	0.76
78_I	83_I	0.712	0.76
36_V	43_L	0.709	0.76
59_K	63_W	0.708	0.76
60_N	66_P	0.708	0.76
74_C	84_V	0.708	0.76
235_G	393_M	0.707	0.76
62_E	68_I	0.706	0.76
83_I	86_S	0.706	0.76
59_K	64_N	0.704	0.76
386_F	422_V	0.704	0.76
39_L	77_L	0.702	0.75
318_Y	428_L	0.701	0.75
68_I	78_I	0.699	0.75
38_L	41_M	0.698	0.75
245_L	271_L	0.697	0.75
82_S	93_S	0.694	0.75
138_P	154_A	0.691	0.74
60_N	70_K	0.687	0.74
30_A	39_L	0.687	0.74
62_E	86_S	0.687	0.74
70_K	76_V	0.686	0.74
69_I	87_Y	0.686	0.74
71_S	87_Y	0.684	0.74
447_N	450_V	0.679	0.73
259_R	457_A	0.679	0.73
443_S	446_K	0.678	0.73
31_I	37_F	0.678	0.73
421_N	425_G	0.676	0.73
81_G	86_S	0.675	0.73
282_Q	288_M	0.675	0.73
48_Q	51_H	0.675	0.73
417_R	429_E	0.674	0.72
396_T	400_M	0.673	0.72
54_L	59_K	0.672	0.72
45_W	52_F	0.672	0.72
43_L	48_Q	0.670	0.72
42_F	46_R	0.669	0.72
73_L	79_A	0.669	0.72
76_V	92_D	0.665	0.71
69_I	74_C	0.665	0.71
452_V	461_A	0.665	0.71
459_A	463_G	0.664	0.71
72_V	81_G	0.663	0.71
120_V	124_F	0.661	0.71
283_K	337_L	0.659	0.71
165_L	291_R	0.655	0.70
58_I	62_E	0.655	0.70
30_A	43_L	0.653	0.70
63_W	85_A	0.653	0.70
84_V	87_Y	0.653	0.70
156_D	172_E	0.651	0.70
49_L	55_S	0.649	0.70
73_L	81_G	0.649	0.70
350_M	364_L	0.648	0.69
30_A	34_V	0.647	0.69
67_L	76_V	0.646	0.69
89_L	96_K	0.643	0.69
37_F	47_E	0.641	0.69
67_L	84_V	0.641	0.69
62_E	74_C	0.640	0.69
201_R	434_I	0.640	0.69
84_V	90_L	0.639	0.68
37_F	45_W	0.638	0.68
143_Q	188_F	0.638	0.68
151_I	161_Q	0.638	0.68
40_S	49_L	0.637	0.68
66_P	81_G	0.636	0.68
58_I	66_P	0.634	0.68
61_F	70_K	0.633	0.68
32_I	35_P	0.633	0.68
264_K	329_D	0.633	0.68
165_L	189_V	0.631	0.67
168_G	409_Y	0.631	0.67
173_N	182_K	0.630	0.67
230_M	386_F	0.629	0.67
75_S	89_L	0.628	0.67
39_L	44_F	0.626	0.67
33_F	47_E	0.626	0.67
438_G	442_M	0.626	0.67
449_L	453_E	0.625	0.67
64_N	92_D	0.624	0.67
86_S	93_S	0.624	0.67
66_P	90_L	0.620	0.66
90_L	95_K	0.620	0.66
137_F	431_Y	0.619	0.66
289_C	375_Y	0.619	0.66
418_G	430_F	0.619	0.66
357_G	362_Y	0.615	0.65
351_K	354_V	0.615	0.65
69_I	92_D	0.614	0.65
170_D	173_N	0.613	0.65
266_A	431_Y	0.613	0.65
76_V	87_Y	0.612	0.65
86_S	89_L	0.611	0.65
67_L	93_S	0.611	0.65
82_S	94_Y	0.610	0.65
454_G	457_A	0.609	0.65
116_E	120_V	0.608	0.65
65_V	71_S	0.607	0.64
68_I	74_C	0.607	0.64
65_V	77_L	0.604	0.64
77_L	84_V	0.603	0.64
248_I	258_V	0.603	0.64
147_N	304_M	0.602	0.64
150_Y	339_D	0.602	0.64
54_L	73_L	0.597	0.63
70_K	85_A	0.596	0.63
68_I	71_S	0.595	0.63
182_K	189_V	0.595	0.63
358_R	369_Q	0.594	0.63
66_P	84_V	0.594	0.63
264_K	369_Q	0.592	0.63
50_I	60_N	0.591	0.62
384_F	405_V	0.590	0.62
150_Y	216_L	0.589	0.62
76_V	81_G	0.586	0.62
31_I	42_F	0.585	0.62
353_L	373_A	0.583	0.61
147_N	430_F	0.583	0.61
88_F	94_Y	0.582	0.61
57_V	60_N	0.582	0.61
74_C	83_I	0.581	0.61
424_T	428_L	0.581	0.61
81_G	90_L	0.581	0.61
150_Y	180_V	0.579	0.61
98_L	102_K	0.579	0.61
168_G	179_L	0.579	0.61
421_N	424_T	0.578	0.61
63_W	80_V	0.577	0.61
75_S	85_A	0.575	0.60
62_E	90_L	0.575	0.60
59_K	90_L	0.573	0.60
54_L	93_S	0.570	0.60
57_V	82_S	0.570	0.60
45_W	54_L	0.570	0.60
232_I	247_I	0.569	0.60
64_N	75_S	0.569	0.60
458_T	461_A	0.568	0.59
73_L	78_I	0.567	0.59
328_F	364_L	0.566	0.59
32_I	39_L	0.565	0.59
87_Y	92_D	0.564	0.59
34_V	40_S	0.564	0.59
31_I	48_Q	0.562	0.59
36_V	41_M	0.561	0.58
56_Q	71_S	0.560	0.58
34_V	45_W	0.560	0.58
39_L	46_R	0.560	0.58
43_L	58_I	0.557	0.58
176_F	191_F	0.556	0.58
125_S	177_C	0.555	0.58
67_L	91_F	0.554	0.57
446_K	450_V	0.554	0.57
77_L	88_F	0.553	0.57
54_L	91_F	0.553	0.57
47_E	87_Y	0.553	0.57
31_I	43_L	0.552	0.57
266_A	360_A	0.552	0.57
69_I	91_F	0.552	0.57
104_A	203_S	0.551	0.57
163_R	166_D	0.551	0.57
43_L	50_I	0.551	0.57
265_N	304_M	0.550	0.57
45_W	55_S	0.550	0.57
34_V	37_F	0.549	0.57
54_L	61_F	0.549	0.57
235_G	382_D	0.548	0.57
77_L	90_L	0.548	0.57
73_L	86_S	0.547	0.57
67_L	82_S	0.546	0.56
35_P	40_S	0.546	0.56
31_I	44_F	0.545	0.56
150_Y	223_Q	0.545	0.56
47_E	52_F	0.545	0.56
113_Y	117_N	0.544	0.56
376_L	400_M	0.544	0.56
64_N	78_I	0.542	0.56
39_L	42_F	0.541	0.56
57_V	65_V	0.541	0.56
71_S	83_I	0.539	0.55
388_V	420_A	0.539	0.55
240_K	300_R	0.539	0.55
80_V	88_F	0.539	0.55
34_V	43_L	0.539	0.55
244_M	327_F	0.538	0.55
81_G	87_Y	0.537	0.55
91_F	95_K	0.537	0.55
30_A	36_V	0.536	0.55
265_N	281_S	0.535	0.55
79_A	91_F	0.535	0.55
338_L	345_E	0.534	0.55
77_L	81_G	0.534	0.55
244_M	268_L	0.534	0.55
66_P	85_A	0.533	0.55
71_S	86_S	0.533	0.55
64_N	74_C	0.532	0.54
34_V	42_F	0.532	0.54
330_E	358_R	0.532	0.54
63_W	81_G	0.531	0.54
458_T	462_S	0.530	0.54
116_E	463_G	0.529	0.54
390_L	415_T	0.529	0.54
159_R	164_F	0.529	0.54
99_H	102_K	0.528	0.54
64_N	82_S	0.527	0.54
204_I	249_K	0.527	0.54
41_M	50_I	0.527	0.54
86_S	91_F	0.526	0.54
232_I	243_F	0.526	0.54
33_F	45_W	0.523	0.53
39_L	45_W	0.523	0.53
70_K	86_S	0.523	0.53
39_L	82_S	0.522	0.53
391_G	426_S	0.521	0.53
101_Q	205_D	0.520	0.53
36_V	46_R	0.518	0.53
236_T	264_K	0.518	0.53
56_Q	66_P	0.518	0.53
88_F	92_D	0.517	0.52
43_L	46_R	0.517	0.52
51_H	61_F	0.517	0.52
69_I	81_G	0.517	0.52
454_G	459_A	0.516	0.52
36_V	39_L	0.515	0.52
154_A	187_G	0.514	0.52
83_I	90_L	0.513	0.52
70_K	82_S	0.512	0.52
58_I	68_I	0.511	0.52
68_I	72_V	0.511	0.52
452_V	459_A	0.510	0.51
63_W	75_S	0.510	0.51
88_F	95_K	0.510	0.51
394_S	397_G	0.509	0.51
229_H	369_Q	0.509	0.51
34_V	49_L	0.508	0.51
63_W	73_L	0.508	0.51
48_Q	59_K	0.508	0.51
77_L	464_S	0.508	0.51
459_A	462_S	0.507	0.51
43_L	54_L	0.507	0.51
331_Y	426_S	0.507	0.51
150_Y	384_F	0.507	0.51
68_I	96_K	0.506	0.51
56_Q	60_N	0.505	0.51
38_L	93_S	0.505	0.51
287_L	349_Y	0.505	0.51
85_A	92_D	0.505	0.51
38_L	50_I	0.504	0.51
88_F	96_K	0.504	0.51
62_E	71_S	0.503	0.50
153_I	431_Y	0.503	0.50
64_N	89_L	0.503	0.50
37_F	48_Q	0.503	0.50
33_F	43_L	0.503	0.50
214_L	220_I	0.501	0.50
384_F	427_V	0.500	0.50

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
2iusA	1	0.7229	100	0.426	Contact Map
2iutA	2	0.7375	100	0.462	Contact Map
4nh0A	1	0.5583	100	0.717	Contact Map
4lyaA	1	0.5708	100	0.757	Contact Map
4d2iA	3	0.6771	99.9	0.802	Contact Map
4ag6A	2	0.4854	99.8	0.82	Contact Map
1e9rA	3	0.5375	99.6	0.861	Contact Map
2r2aA	1	0.3812	98.8	0.901	Contact Map
1jbkA	1	0.3688	98.4	0.913	Contact Map
2r8rA	1	0.425	98.2	0.919	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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