GREMLIN Database
YDAP - Putative thiamine pyrophosphate-containing protein YdaP
UniProt: P96591 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 574 (530)
Sequences: 14311 (9197)
Seq/√Len: 399.5

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
491_A494_E4.9681.00
367_R510_A3.7671.00
461_N526_D3.6561.00
56_A86_G3.4571.00
501_I515_E3.4281.00
226_D246_H3.3881.00
220_E319_R3.3161.00
505_K508_E3.1061.00
20_D68_K3.0641.00
502_K528_M2.9751.00
194_V324_Y2.9521.00
371_A514_H2.8431.00
220_E315_A2.7401.00
15_E43_Q2.7241.00
65_L424_E2.7081.00
245_K396_N2.6481.00
312_C317_G2.6401.00
501_I523_V2.6081.00
499_K521_Q2.5691.00
210_A221_L2.5521.00
367_R370_E2.4731.00
21_H45_K2.4521.00
504_T508_E2.4441.00
501_I512_A2.3151.00
196_C291_I2.3121.00
417_A431_A2.2961.00
274_L314_S2.2741.00
74_S83_L2.2561.00
488_D491_A2.2271.00
502_K526_D2.1781.00
69_I151_Y2.1641.00
370_E510_A2.1341.00
268_C271_L2.1311.00
424_E427_R2.1021.00
49_T55_A2.0821.00
8_Q36_E2.0811.00
273_M276_T2.0781.00
499_K515_E2.0671.00
87_L99_A2.0221.00
293_L317_G2.0101.00
121_Q124_E2.0061.00
439_S496_C1.9941.00
492_F495_S1.9881.00
81_V85_N1.9561.00
208_I225_A1.9551.00
199_Y270_L1.9541.00
98_L147_I1.9441.00
199_Y308_A1.9431.00
490_A500_G1.9401.00
101_A158_V1.9191.00
199_Y289_P1.9011.00
12_E16_Q1.8941.00
227_K322_T1.8861.00
369_Q394_K1.8821.00
503_V512_A1.8681.00
200_I272_I1.8511.00
142_L159_L1.8491.00
514_H518_H1.8371.00
373_A376_A1.8341.00
190_K320_E1.8291.00
333_F337_C1.8071.00
438_F442_M1.7801.00
195_T198_Q1.7791.00
499_K523_V1.7741.00
198_Q202_N1.7651.00
227_K326_E1.7601.00
421_S454_P1.7561.00
69_I98_L1.7531.00
223_E227_K1.7501.00
225_A232_I1.7381.00
189_K192_Q1.7271.00
508_E511_P1.7241.00
208_I272_I1.7191.00
449_V498_A1.7111.00
60_A64_K1.7091.00
222_L226_D1.7051.00
4_K12_E1.7021.00
516_A525_V1.6911.00
459_I524_V1.6901.00
366_A370_E1.6851.00
504_T528_M1.6281.00
118_K121_Q1.6261.00
377_V420_A1.6181.00
510_A514_H1.6181.00
336_A340_H1.6041.00
363_Q506_A1.5871.00
412_C416_G1.5821.00
341_M345_W1.5771.00
208_I230_A1.5731.00
135_S138_S1.5731.00
8_Q39_H1.5701.00
219_R223_E1.5691.00
368_L432_V1.5691.00
381_D433_C1.5671.00
192_Q195_T1.5531.00
494_E499_K1.5501.00
127_A158_V1.5491.00
511_P515_E1.5451.00
12_E15_E1.5401.00
371_A510_A1.5271.00
24_G46_F1.5181.00
131_R159_L1.4971.00
66_T423_S1.4961.00
274_L293_L1.4931.00
381_D437_G1.4891.00
34_I46_F1.4851.00
229_A248_H1.4801.00
300_I311_V1.4751.00
136_A168_E1.4621.00
402_I420_A1.4611.00
128_V155_G1.4571.00
363_Q367_R1.4571.00
421_S453_L1.4561.00
200_I270_L1.4551.00
490_A502_K1.4541.00
335_N339_E1.4461.00
13_L144_N1.4461.00
400_D427_R1.4441.00
10_M161_V1.4351.00
511_P514_H1.4311.00
203_A206_P1.4301.00
458_V525_V1.4241.00
197_A324_Y1.4161.00
367_R371_A1.4151.00
270_L291_I1.4051.00
54_V444_D1.3851.00
331_R335_N1.3841.00
448_A455_I1.3831.00
10_M143_L1.3771.00
376_A428_Q1.3751.00
232_I242_V1.3721.00
69_I147_I1.3691.00
448_A498_A1.3671.00
289_P307_T1.3601.00
458_V513_F1.3561.00
100_I161_V1.3531.00
445_L498_A1.3531.00
267_E336_A1.3531.00
106_S164_D1.3521.00
422_L453_L1.3521.00
49_T58_A1.3481.00
364_V527_V1.3461.00
373_A428_Q1.3421.00
21_H422_L1.3371.00
197_A321_L1.3321.00
17_W147_I1.3301.00
430_I517_L1.3291.00
442_M492_F1.3221.00
374_D396_N1.3201.00
83_L99_A1.3181.00
372_A430_I1.3171.00
458_V527_V1.3151.00
490_A494_E1.3141.00
223_E322_T1.3141.00
45_K451_Y1.3111.00
339_E343_H1.3101.00
315_A319_R1.3021.00
188_P317_G1.2881.00
421_S428_Q1.2871.00
98_L150_A1.2841.00
17_W144_N1.2811.00
56_A83_L1.2771.00
377_V424_E1.2761.00
428_Q517_L1.2731.00
274_L318_L1.2721.00
456_T516_A1.2711.00
224_F228_A1.2671.00
338_T341_M1.2651.00
203_A270_L1.2641.00
418_I448_A1.2621.00
87_L97_V1.2611.00
492_F496_C1.2611.00
193_L324_Y1.2601.00
207_I268_C1.2581.00
133_V139_L1.2571.00
301_G306_V1.2561.00
431_A457_V1.2441.00
80_A101_A1.2431.00
138_S141_D1.2351.00
463_E486_N1.2261.00
337_C341_M1.2251.00
338_T342_Q1.2241.00
194_V198_Q1.2201.00
224_F322_T1.2131.00
23_Y62_E1.2111.00
454_P521_Q1.2101.00
15_E41_R1.2071.00
221_L318_L1.2061.00
454_P520_D1.2021.00
47_I422_L1.1991.00
359_L527_V1.1991.00
143_L159_L1.1981.00
222_L243_P1.1981.00
141_D145_Q1.1971.00
491_A495_S1.1951.00
374_D397_A1.1901.00
7_G36_E1.1901.00
22_V37_L1.1901.00
224_F318_L1.1891.00
320_E323_E1.1881.00
223_E226_D1.1781.00
62_E423_S1.1771.00
187_E320_E1.1731.00
313_D316_L1.1721.00
377_V429_A1.1701.00
214_M221_L1.1701.00
493_A524_V1.1691.00
234_V249_F1.1681.00
195_T199_Y1.1671.00
509_L527_V1.1671.00
263_E267_E1.1651.00
13_L143_L1.1641.00
359_L364_V1.1631.00
220_E223_E1.1601.00
316_L319_R1.1541.00
208_I224_F1.1531.00
63_A96_P1.1521.00
60_A89_D1.1451.00
410_M440_M1.1411.00
9_A170_I1.1391.00
162_S165_L1.1391.00
201_N326_E1.1381.00
498_A524_V1.1361.00
5_T169_K1.1351.00
190_K324_Y1.1351.00
131_R145_Q1.1351.00
133_V142_L1.1311.00
15_E42_N1.1311.00
499_K519_S1.1301.00
5_T8_Q1.1301.00
20_D45_K1.1291.00
131_R142_L1.1271.00
197_A201_N1.1251.00
512_A525_V1.1231.00
210_A214_M1.1221.00
342_Q346_N1.1181.00
84_L122_M1.1171.00
88_Y407_L1.1161.00
493_A498_A1.1131.00
222_L242_V1.1121.00
205_K267_E1.1121.00
19_V71_V1.1121.00
107_G164_D1.1091.00
106_S168_E1.1071.00
493_A500_G1.1051.00
201_N328_K1.1051.00
6_A139_L1.1011.00
84_L126_V1.0951.00
515_E518_H1.0931.00
65_L420_A1.0911.00
446_P450_K1.0901.00
149_T157_A1.0891.00
259_K263_E1.0891.00
220_E322_T1.0801.00
206_P269_D1.0791.00
60_A95_A1.0791.00
21_H47_I1.0781.00
242_V246_H1.0751.00
10_M100_I1.0701.00
233_V250_L1.0621.00
239_K244_D1.0621.00
378_L393_F1.0591.00
81_V122_M1.0591.00
122_M126_V1.0581.00
219_R222_L1.0581.00
500_G524_V1.0561.00
225_A242_V1.0541.00
91_K156_V1.0541.00
54_V441_V1.0491.00
339_E342_Q1.0491.00
223_E319_R1.0461.00
509_L513_F1.0441.00
222_L246_H1.0411.00
501_I525_V1.0381.00
463_E528_M1.0381.00
72_C83_L1.0351.00
127_A130_N1.0331.00
250_L264_A1.0331.00
421_S429_A1.0301.00
4_K169_K1.0281.00
207_I233_V1.0271.00
428_Q456_T1.0271.00
56_A72_C1.0251.00
456_T523_V1.0211.00
226_D248_H1.0191.00
375_D427_R1.0181.00
225_A248_H1.0151.00
202_N289_P1.0131.00
372_A378_L1.0131.00
9_A140_P1.0111.00
30_I33_F1.0091.00
197_A325_I1.0091.00
208_I221_L1.0081.00
109_V132_E1.0081.00
306_V309_G1.0061.00
421_S425_P1.0051.00
503_V508_E1.0031.00
196_C308_A1.0021.00
129_F149_T1.0021.00
61_A65_L1.0021.00
316_L320_E0.9971.00
414_L438_F0.9941.00
196_C310_L0.9941.00
10_M33_F0.9911.00
47_I451_Y0.9911.00
227_K327_R0.9901.00
285_P288_T0.9861.00
519_S523_V0.9861.00
22_V71_V0.9851.00
187_E316_L0.9821.00
273_M278_F0.9801.00
360_K533_P0.9781.00
203_A269_D0.9771.00
188_P320_E0.9771.00
334_L338_T0.9751.00
340_H344_W0.9691.00
446_P496_C0.9681.00
151_Y154_K0.9661.00
379_S429_A0.9661.00
503_V509_L0.9641.00
438_F459_I0.9601.00
218_K222_L0.9591.00
397_A400_D0.9541.00
459_I489_Y0.9521.00
198_Q201_N0.9511.00
103_Q160_S0.9491.00
413_G431_A0.9451.00
490_A526_D0.9451.00
191_E194_V0.9441.00
87_L123_F0.9431.00
379_S431_A0.9421.00
365_V432_V0.9411.00
508_E512_A0.9391.00
421_S426_E0.9351.00
516_A523_V0.9341.00
369_Q393_F0.9341.00
201_N325_I0.9331.00
442_M496_C0.9311.00
130_N158_V0.9311.00
190_K194_V0.9261.00
120_E130_N0.9251.00
74_S99_A0.9251.00
363_Q509_L0.9231.00
469_E483_K0.9221.00
68_K151_Y0.9221.00
72_C99_A0.9211.00
220_E318_L0.9211.00
498_A522_P0.9171.00
335_N338_T0.9171.00
33_F161_V0.9151.00
80_A123_F0.9141.00
202_N270_L0.9131.00
445_L524_V0.9111.00
337_C340_H0.9101.00
452_K520_D0.9091.00
8_Q12_E0.9091.00
145_Q149_T0.9071.00
223_E326_E0.9061.00
512_A516_A0.9031.00
56_A97_V0.9011.00
460_L529_I0.9001.00
445_L457_V0.8991.00
207_I271_L0.8981.00
456_T517_L0.8971.00
6_A136_A0.8911.00
129_F142_L0.8901.00
196_C270_L0.8891.00
64_K95_A0.8861.00
37_L44_L0.8841.00
13_L17_W0.8781.00
81_V88_Y0.8731.00
121_Q125_D0.8681.00
389_M432_V0.8671.00
448_A457_V0.8661.00
421_S521_Q0.8661.00
364_V460_L0.8641.00
438_F524_V0.8641.00
376_A430_I0.8631.00
300_I309_G0.8601.00
207_I265_M0.8591.00
512_A515_E0.8551.00
253_L265_M0.8551.00
439_S442_M0.8521.00
371_A513_F0.8501.00
198_Q328_K0.8481.00
129_F146_A0.8471.00
456_T525_V0.8471.00
297_P311_V0.8451.00
336_A339_E0.8431.00
61_A416_G0.8431.00
65_L402_I0.8421.00
120_E132_E0.8411.00
448_A522_P0.8401.00
199_Y291_I0.8401.00
375_D397_A0.8391.00
85_N409_T0.8381.00
94_G153_K0.8381.00
419_A423_S0.8371.00
463_E531_N0.8331.00
432_V460_L0.8321.00
150_A157_A0.8301.00
84_L123_F0.8301.00
205_K269_D0.8301.00
310_L317_G0.8291.00
224_F325_I0.8281.00
13_L16_Q0.8271.00
365_V460_L0.8241.00
58_A448_A0.8241.00
21_H62_E0.8241.00
332_R335_N0.8221.00
188_P193_L0.8211.00
367_R509_L0.8201.00
494_E500_G0.8201.00
35_E38_R0.8181.00
208_I274_L0.8161.00
148_R152_S0.8161.00
244_D249_F0.8161.00
436_G465_L0.8151.00
98_L151_Y0.8151.00
32_E167_A0.8151.00
161_V166_F0.8091.00
455_I522_P0.8091.00
217_A220_E0.8081.00
371_A517_L0.8081.00
228_A325_I0.8061.00
196_C199_Y0.8061.00
193_L320_E0.8051.00
210_A232_I0.8011.00
216_K399_Q0.8001.00
245_K374_D0.7981.00
71_V98_L0.7971.00
210_A234_V0.7971.00
515_E519_S0.7941.00
488_D502_K0.7921.00
359_L506_A0.7891.00
320_E324_Y0.7891.00
430_I458_V0.7891.00
57_L409_T0.7841.00
293_L310_L0.7831.00
195_T308_A0.7821.00
418_I453_L0.7811.00
129_F145_Q0.7811.00
196_C317_G0.7811.00
214_M241_V0.7781.00
450_K485_Q0.7771.00
14_L71_V0.7771.00
337_C345_W0.7761.00
341_M344_W0.7751.00
330_D334_L0.7741.00
129_F157_A0.7741.00
478_I481_V0.7731.00
65_L423_S0.7721.00
128_V157_A0.7691.00
461_N528_M0.7671.00
39_H42_N0.7651.00
456_T520_D0.7651.00
4_K9_A0.7631.00
417_A455_I0.7621.00
20_D62_E0.7601.00
5_T36_E0.7601.00
365_V393_F0.7581.00
507_E511_P0.7531.00
254_G257_G0.7511.00
73_L100_I0.7501.00
488_D494_E0.7491.00
88_Y126_V0.7481.00
242_V249_F0.7481.00
62_E68_K0.7471.00
282_D286_D0.7431.00
201_N323_E0.7421.00
136_A140_P0.7421.00
369_Q396_N0.7411.00
449_V522_P0.7391.00
17_W151_Y0.7391.00
26_P48_Q0.7391.00
15_E20_D0.7351.00
201_N324_Y0.7351.00
36_E39_H0.7341.00
23_Y58_A0.7341.00
414_L457_V0.7341.00
380_V401_F0.7331.00
22_V73_L0.7311.00
385_V437_G0.7301.00
380_V389_M0.7301.00
215_K399_Q0.7291.00
132_E160_S0.7271.00
49_T54_V0.7261.00
272_I293_L0.7251.00
469_E473_Q0.7241.00
20_D43_Q0.7221.00
270_L289_P0.7211.00
188_P316_L0.7211.00
185_N313_D0.7201.00
377_V427_R0.7191.00
236_L390_A0.7181.00
206_P230_A0.7181.00
63_A95_A0.7171.00
243_P396_N0.7161.00
430_I456_T0.7161.00
145_Q148_R0.7151.00
19_V147_I0.7141.00
380_V403_V0.7141.00
212_Q237_P0.7111.00
428_Q454_P0.7071.00
333_F336_A0.7071.00
25_I83_L0.7051.00
128_V149_T0.7031.00
439_S487_V0.7021.00
217_A315_A0.7021.00
483_K531_N0.7011.00
449_V497_G0.7011.00
30_I73_L0.7001.00
206_P270_L0.6991.00
175_V178_S0.6961.00
282_D285_P0.6961.00
342_Q345_W0.6961.00
142_L145_Q0.6941.00
414_L444_D0.6941.00
372_A376_A0.6931.00
344_W348_I0.6901.00
149_T153_K0.6901.00
432_V458_V0.6881.00
120_E124_E0.6871.00
30_I34_I0.6871.00
457_V498_A0.6851.00
63_A97_V0.6840.99
74_S101_A0.6840.99
53_E82_H0.6830.99
136_A170_I0.6820.99
81_V84_L0.6810.99
500_G526_D0.6800.99
204_K269_D0.6790.99
101_A160_S0.6790.99
33_F166_F0.6780.99
234_V244_D0.6770.99
38_R479_D0.6770.99
381_D413_G0.6760.99
106_S134_H0.6750.99
128_V152_S0.6750.99
317_G320_E0.6740.99
62_E66_T0.6720.99
243_P246_H0.6720.99
319_R323_E0.6710.99
319_R322_T0.6710.99
33_F73_L0.6690.99
87_L126_V0.6690.99
439_S489_Y0.6670.99
123_F158_V0.6670.99
379_S420_A0.6630.99
314_S319_R0.6630.99
333_F341_M0.6630.99
74_S80_A0.6620.99
209_L273_M0.6620.99
464_N469_E0.6610.99
431_A437_G0.6600.99
229_A247_P0.6570.99
379_S402_I0.6550.99
422_L451_Y0.6550.99
187_E190_K0.6540.99
503_V525_V0.6530.99
140_P144_N0.6530.99
192_Q196_C0.6530.99
449_V485_Q0.6530.99
90_A97_V0.6510.99
322_T326_E0.6490.99
324_Y328_K0.6480.99
95_A412_C0.6480.99
359_L505_K0.6480.99
91_K128_V0.6480.99
364_V458_V0.6480.99
330_D333_F0.6450.99
136_A165_L0.6450.99
418_I447_T0.6440.99
56_A99_A0.6440.99
208_I232_I0.6420.99
458_V509_L0.6400.99
21_H68_K0.6400.99
448_A453_L0.6380.99
438_F489_Y0.6370.99
332_R336_A0.6370.99
75_I115_Q0.6350.99
340_H343_H0.6350.99
50_R450_K0.6350.99
263_E266_E0.6340.99
8_Q41_R0.6320.99
487_V495_S0.6310.99
218_K398_N0.6310.99
343_H346_N0.6300.99
32_E166_F0.6290.99
333_F345_W0.6290.99
16_Q176_Y0.6270.99
262_Y266_E0.6260.99
323_E326_E0.6250.99
346_N349_E0.6250.99
402_I412_C0.6240.99
417_A429_A0.6240.99
81_V117_I0.6240.99
501_I519_S0.6220.99
520_D523_V0.6220.99
454_P522_P0.6220.99
22_V44_L0.6210.99
498_A521_Q0.6200.99
133_V162_S0.6200.99
209_L235_T0.6200.99
227_K325_I0.6170.99
512_A523_V0.6170.99
229_A334_L0.6160.99
199_Y202_N0.6160.99
147_I151_Y0.6150.99
82_H85_N0.6150.99
4_K8_Q0.6130.99
30_I102_G0.6130.99
368_L458_V0.6130.99
433_C457_V0.6130.99
204_K330_D0.6110.99
414_L433_C0.6100.99
138_S142_L0.6100.99
415_P444_D0.6090.99
92_A407_L0.6090.99
284_L288_T0.6080.99
292_Q306_V0.6080.99
414_L448_A0.6080.99
317_G321_L0.6070.99
505_K511_P0.6040.99
283_Y286_D0.6020.99
57_L89_D0.6020.99
220_E224_F0.6020.99
106_S162_S0.6010.99
128_V153_K0.6010.99
345_W394_K0.6000.99
221_L225_A0.5990.99
45_K425_P0.5980.99
192_Q310_L0.5980.99
209_L276_T0.5970.99
488_D526_D0.5960.99
20_D66_T0.5960.99
100_I143_L0.5950.99
228_A248_H0.5940.99
294_D299_K0.5930.99
364_V509_L0.5900.99
101_A119_L0.5890.98
6_A9_A0.5890.98
363_Q510_A0.5880.98
15_E44_L0.5880.98
62_E70_G0.5870.98
225_A228_A0.5860.98
223_E323_E0.5850.98
11_T42_N0.5850.98
337_C349_E0.5840.98
209_L271_L0.5830.98
358_P530_G0.5830.98
513_F517_L0.5800.98
146_A159_L0.5800.98
438_F457_V0.5790.98
273_M290_A0.5780.98
420_A429_A0.5780.98
376_A427_R0.5780.98
300_I306_V0.5770.98
45_K422_L0.5770.98
239_K395_M0.5770.98
193_L310_L0.5760.98
103_Q109_V0.5750.98
452_K521_Q0.5740.98
164_D168_E0.5740.98
193_L321_L0.5740.98
380_V413_G0.5740.98
357_T506_A0.5730.98
13_L140_P0.5730.98
69_I150_A0.5730.98
487_V492_F0.5730.98
149_T152_S0.5730.98
58_A422_L0.5730.98
379_S413_G0.5710.98
217_A314_S0.5700.98
98_L157_A0.5700.98
200_I228_A0.5700.98
433_C441_V0.5690.98
106_S135_S0.5660.98
71_V147_I0.5650.98
240_G244_D0.5640.98
205_K333_F0.5630.98
442_M495_S0.5620.98
457_V524_V0.5620.98
65_L377_V0.5600.98
247_P338_T0.5590.98
349_E366_A0.5590.98
61_A419_A0.5580.98
234_V239_K0.5580.98
357_T505_K0.5580.98
372_A393_F0.5580.98
501_I511_P0.5570.98
213_G294_D0.5560.98
51_H82_H0.5550.98
344_W347_E0.5530.98
204_K336_A0.5530.98
244_D394_K0.5520.98
96_P150_A0.5520.98
131_R157_A0.5510.98
153_K296_D0.5500.98
365_V369_Q0.5490.98
35_E479_D0.5490.98
222_L225_A0.5480.98
324_Y327_R0.5480.98
71_V100_I0.5480.98
188_P312_C0.5470.98
362_Q533_P0.5460.98
190_K323_E0.5460.98
185_N316_L0.5460.98
106_S165_L0.5450.98
140_P143_L0.5450.98
60_A416_G0.5450.98
25_I465_L0.5450.98
204_K332_R0.5450.98
237_P405_S0.5440.97
11_T41_R0.5440.97
192_Q308_A0.5440.97
447_T453_L0.5400.97
385_V460_L0.5400.97
98_L159_L0.5390.97
389_M401_F0.5390.97
373_A517_L0.5370.97
13_L147_I0.5370.97
23_Y422_L0.5370.97
189_K316_L0.5360.97
136_A139_L0.5360.97
449_V452_K0.5360.97
100_I159_L0.5360.97
446_P487_V0.5360.97
469_E531_N0.5350.97
299_K302_K0.5350.97
6_A168_E0.5330.97
506_A510_A0.5320.97
219_R226_D0.5320.97
379_S416_G0.5310.97
266_E286_D0.5310.97
103_Q132_E0.5310.97
55_A72_C0.5310.97
289_P308_A0.5300.97
16_Q172_R0.5300.97
459_I526_D0.5290.97
250_L261_A0.5280.97
88_Y117_I0.5280.97
185_N189_K0.5280.97
372_A517_L0.5270.97
56_A87_L0.5270.97
456_T521_Q0.5270.97
377_V402_I0.5270.97
397_A427_R0.5250.97
83_L101_A0.5240.97
201_N204_K0.5240.97
468_I472_Q0.5240.97
25_I49_T0.5230.97
18_G68_K0.5230.97
439_S443_Q0.5220.97
242_V247_P0.5220.97
229_A327_R0.5210.97
207_I264_A0.5210.97
503_V511_P0.5200.97
11_T37_L0.5200.97
64_K93_D0.5200.97
50_R446_P0.5180.97
63_A70_G0.5180.97
444_D447_T0.5170.97
110_G116_E0.5150.97
494_E501_I0.5150.97
240_G400_D0.5130.96
234_V241_V0.5130.96
503_V527_V0.5120.96
114_F408_A0.5120.96
375_D428_Q0.5120.96
456_T519_S0.5120.96
28_D75_I0.5110.96
499_K520_D0.5110.96
433_C437_G0.5100.96
365_V389_M0.5100.96
148_R151_Y0.5100.96
124_E130_N0.5090.96
119_L158_V0.5080.96
47_I447_T0.5080.96
14_L100_I0.5070.96
89_D93_D0.5060.96
141_D144_N0.5050.96
63_A69_I0.5040.96
27_G75_I0.5020.96
487_V496_C0.5020.96
337_C344_W0.5020.96
174_P178_S0.5020.96
222_L248_H0.5010.96
83_L86_G0.5010.96
212_Q277_S0.5010.96
333_F344_W0.5010.96
215_K241_V0.5010.96
91_K127_A0.5000.96
514_H517_L0.5000.96
449_V521_Q0.5000.96
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
3eyaA 5 0.9181 100 0.189 Contact Map
1v5eA 4 0.993 100 0.201 Contact Map
1ozhA 4 0.939 100 0.202 Contact Map
1t9bA 2 0.9895 100 0.203 Contact Map
1ybhA 4 0.9564 100 0.204 Contact Map
4kgdA 4 0.9913 100 0.205 Contact Map
2panA 3 0.9826 100 0.208 Contact Map
4rjjA 5 0.946 100 0.209 Contact Map
2pgnA 4 0.9808 100 0.211 Contact Map
2ihtA 4 0.9251 100 0.217 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0147 seconds.