GLCD - BACSU - GREMLIN Contacts

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GLCD - Glycolate oxidase subunit GlcD

UniProt:	P94535	Sequences: MITKDVKEQLIQVSGPENFDDSNAGRLVYSYDATPQYQSMPDAVIAPRNTDEISRILTICSEHRVPIVPRGSGTNLCGGTCPTEGGLVLLFKHMNQILEIDEENLTATVQPGVITLDMIRAVESKGLFYPPDPSSMKISTIGGNINENSGGLRGLKYGVTRDYVIGLEVVLANGDIIRTGGKLAKDVAGYDLTRLFVGSEGTLGIVTEAIVKLVPKPETKKTLLALYENIDAAAQTVSDIIAAKIIPATLEFLDQPTLLVIEDYAKIGLPTSAKAVLLIEQDGPFETVERDMEKIEAICKKGDAVSVQTAQTEEEAFALTEARRSALSALARLKPTTILEDATVPRSEIANMVKAINDIAAKYDISICTFGHAGDGNLHPTCTTDIRNKDEMERVEQAFAEIFEKAIELGGTITGEHGVGEMKAPYLEMKLKKEGIDAMKALKAAFDPRNILNPGKMFAKDARKRVVAER	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	470 (428)
Sequences:	18588 (13786)
Seq/√Len:	666.4

ECOLI - GLCD YGCU YDIJ GLCE
BACSU - GLCD YITY YVDP YGAK
HALSA - Q9HMR2
SULSO - Q97U60 Q97Y18 Q7LX43 Q97U59 Q97ZB9 Q7LXI5 Q97Z67

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
50_T	168_E	4.213	1.00
168_E	208_E	4.207	1.00
61_S	449_R	3.767	1.00
145_I	209_A	3.752	1.00
96_Q	110_Q	3.388	1.00
101_D	104_N	3.293	1.00
165_I	212_K	3.175	1.00
95_N	117_D	3.052	1.00
108_T	210_I	2.997	1.00
64_R	449_R	2.994	1.00
121_A	124_S	2.989	1.00
229_N	232_A	2.954	1.00
168_E	178_R	2.904	1.00
108_T	208_E	2.848	1.00
127_L	213_L	2.809	1.00
45_I	56_I	2.805	1.00
48_R	93_H	2.787	1.00
169_V	196_F	2.761	1.00
113_V	118_M	2.682	1.00
348_E	351_N	2.642	1.00
53_I	207_T	2.578	1.00
171_L	175_D	2.549	1.00
110_Q	208_E	2.513	1.00
54_S	176_I	2.475	1.00
172_A	452_L	2.445	1.00
57_L	67_I	2.392	1.00
166_G	178_R	2.320	1.00
102_E	125_K	2.224	1.00
166_G	210_I	2.222	1.00
355_A	408_E	2.187	1.00
116_L	120_R	2.115	1.00
107_A	118_M	2.092	1.00
122_V	213_L	2.049	1.00
171_L	177_I	2.044	1.00
50_T	176_I	2.026	1.00
114_I	117_D	2.021	1.00
59_I	63_H	1.995	1.00
97_I	113_V	1.994	1.00
231_D	354_K	1.991	1.00
51_D	54_S	1.991	1.00
50_T	207_T	1.981	1.00
94_M	110_Q	1.960	1.00
50_T	54_S	1.949	1.00
146_N	199_S	1.943	1.00
168_E	176_I	1.924	1.00
51_D	55_R	1.924	1.00
169_V	204_G	1.921	1.00
109_V	141_I	1.915	1.00
70_R	73_G	1.913	1.00
89_L	205_I	1.900	1.00
57_L	452_L	1.899	1.00
48_R	52_E	1.897	1.00
166_G	180_G	1.896	1.00
123_E	216_K	1.885	1.00
167_L	196_F	1.878	1.00
91_F	205_I	1.860	1.00
106_T	210_I	1.841	1.00
293_E	297_A	1.828	1.00
195_L	442_L	1.818	1.00
107_A	211_V	1.804	1.00
99_E	108_T	1.802	1.00
54_S	58_T	1.800	1.00
53_I	205_I	1.799	1.00
46_A	93_H	1.795	1.00
168_E	207_T	1.790	1.00
358_D	362_K	1.774	1.00
105_L	127_L	1.753	1.00
106_T	165_I	1.752	1.00
100_I	121_A	1.745	1.00
55_R	58_T	1.739	1.00
49_N	52_E	1.729	1.00
117_D	120_R	1.728	1.00
405_K	408_E	1.706	1.00
69_P	205_I	1.697	1.00
91_F	94_M	1.693	1.00
441_A	445_A	1.673	1.00
145_I	164_V	1.670	1.00
421_E	456_K	1.627	1.00
180_G	188_A	1.626	1.00
105_L	215_P	1.618	1.00
146_N	206_V	1.608	1.00
437_D	440_K	1.597	1.00
404_E	429_M	1.593	1.00
393_E	397_Q	1.587	1.00
404_E	408_E	1.585	1.00
144_N	160_T	1.583	1.00
397_Q	401_E	1.578	1.00
57_L	61_S	1.575	1.00
145_I	211_V	1.563	1.00
60_C	87_L	1.562	1.00
58_T	61_S	1.549	1.00
196_F	204_G	1.546	1.00
170_V	207_T	1.539	1.00
101_D	106_T	1.522	1.00
97_I	121_A	1.518	1.00
59_I	65_V	1.510	1.00
163_Y	214_V	1.505	1.00
96_Q	113_V	1.503	1.00
179_T	189_G	1.501	1.00
45_I	87_L	1.494	1.00
53_I	170_V	1.494	1.00
289_E	293_E	1.476	1.00
239_D	243_A	1.474	1.00
437_D	441_A	1.473	1.00
109_V	211_V	1.466	1.00
232_A	235_Q	1.463	1.00
444_A	450_N	1.460	1.00
164_V	167_L	1.454	1.00
355_A	409_L	1.450	1.00
110_Q	113_V	1.449	1.00
57_L	205_I	1.446	1.00
139_S	144_N	1.439	1.00
440_K	444_A	1.438	1.00
231_D	235_Q	1.438	1.00
179_T	193_T	1.436	1.00
362_K	401_E	1.435	1.00
172_A	446_F	1.423	1.00
53_I	89_L	1.418	1.00
22_S	25_G	1.403	1.00
121_A	125_K	1.399	1.00
355_A	358_D	1.397	1.00
47_P	52_E	1.396	1.00
321_E	325_S	1.395	1.00
443_K	450_N	1.381	1.00
20_D	25_G	1.379	1.00
47_P	56_I	1.373	1.00
130_P	163_Y	1.368	1.00
359_I	362_K	1.363	1.00
176_I	207_T	1.348	1.00
57_L	170_V	1.338	1.00
107_A	213_L	1.333	1.00
400_A	404_E	1.333	1.00
100_I	107_A	1.332	1.00
355_A	405_K	1.313	1.00
438_A	441_A	1.311	1.00
388_N	391_E	1.309	1.00
109_V	118_M	1.302	1.00
95_N	110_Q	1.292	1.00
235_Q	239_D	1.284	1.00
435_G	438_A	1.282	1.00
351_N	355_A	1.278	1.00
170_V	176_I	1.274	1.00
363_Y	401_E	1.271	1.00
293_E	296_E	1.269	1.00
100_I	127_L	1.268	1.00
58_T	62_E	1.262	1.00
52_E	55_R	1.253	1.00
60_C	67_I	1.251	1.00
228_E	232_A	1.246	1.00
396_E	400_A	1.242	1.00
432_K	435_G	1.242	1.00
391_E	394_R	1.234	1.00
120_R	124_S	1.226	1.00
23_N	26_R	1.225	1.00
171_L	446_F	1.220	1.00
107_A	122_V	1.218	1.00
417_H	420_G	1.214	1.00
357_N	361_A	1.206	1.00
251_E	254_D	1.197	1.00
358_D	361_A	1.183	1.00
46_A	90_L	1.181	1.00
312_T	315_E	1.170	1.00
436_I	440_K	1.170	1.00
54_S	170_V	1.169	1.00
345_P	348_E	1.158	1.00
56_I	87_L	1.155	1.00
177_I	189_G	1.154	1.00
70_R	88_V	1.150	1.00
145_I	160_T	1.141	1.00
66_P	86_G	1.137	1.00
359_I	405_K	1.132	1.00
394_R	397_Q	1.128	1.00
441_A	444_A	1.127	1.00
61_S	451_I	1.125	1.00
119_I	133_P	1.125	1.00
186_D	190_Y	1.119	1.00
56_I	89_L	1.115	1.00
313_E	317_F	1.113	1.00
194_R	438_A	1.104	1.00
255_Q	259_L	1.103	1.00
413_I	416_E	1.091	1.00
196_F	206_V	1.086	1.00
71_G	140_T	1.086	1.00
180_G	187_V	1.077	1.00
67_I	89_L	1.076	1.00
390_D	393_E	1.061	1.00
46_A	92_K	1.060	1.00
91_F	111_P	1.047	1.00
43_A	87_L	1.046	1.00
164_V	197_V	1.043	1.00
115_T	133_P	1.038	1.00
158_G	162_D	1.037	1.00
167_L	193_T	1.036	1.00
352_M	409_L	1.032	1.00
239_D	242_A	1.026	1.00
142_G	209_A	1.016	1.00
253_L	256_P	1.016	1.00
371_G	374_G	1.015	1.00
169_V	177_I	1.013	1.00
199_S	203_L	1.010	1.00
294_K	297_A	1.006	1.00
167_L	209_A	1.001	1.00
296_E	300_K	0.999	1.00
26_R	30_S	0.997	1.00
287_T	290_R	0.995	1.00
70_R	90_L	0.995	1.00
42_D	85_G	0.995	1.00
354_K	358_D	0.992	1.00
191_D	194_R	0.992	1.00
64_R	451_I	0.990	1.00
285_F	289_E	0.988	1.00
178_R	210_I	0.985	1.00
315_E	318_A	0.984	1.00
21_D	26_R	0.982	1.00
75_N	79_G	0.976	1.00
115_T	144_N	0.976	1.00
195_L	203_L	0.972	1.00
58_T	175_D	0.971	1.00
95_N	113_V	0.971	1.00
117_D	121_A	0.965	1.00
414_T	419_V	0.962	1.00
50_T	170_V	0.955	1.00
392_M	396_E	0.953	1.00
29_Y	46_A	0.952	1.00
26_R	40_M	0.951	1.00
67_I	451_I	0.947	1.00
320_T	323_R	0.944	1.00
328_S	331_A	0.943	1.00
190_Y	202_T	0.937	1.00
366_S	369_T	0.936	1.00
27_L	30_S	0.932	1.00
254_D	257_T	0.931	1.00
359_I	401_E	0.926	1.00
256_P	259_L	0.925	1.00
20_D	46_A	0.924	1.00
141_I	211_V	0.923	1.00
165_I	210_I	0.922	1.00
50_T	110_Q	0.921	1.00
180_G	189_G	0.917	1.00
141_I	209_A	0.917	1.00
247_P	256_P	0.916	1.00
179_T	196_F	0.916	1.00
397_Q	400_A	0.913	1.00
297_A	301_K	0.911	1.00
53_I	94_M	0.905	1.00
239_D	301_K	0.905	1.00
323_R	326_A	0.899	1.00
320_T	324_R	0.898	1.00
178_R	208_E	0.897	1.00
249_T	254_D	0.894	1.00
113_V	117_D	0.887	1.00
351_N	409_L	0.887	1.00
71_G	111_P	0.886	1.00
163_Y	212_K	0.882	1.00
173_N	177_I	0.881	1.00
71_G	91_F	0.881	1.00
47_P	93_H	0.879	1.00
343_T	412_T	0.878	1.00
405_K	409_L	0.877	1.00
238_S	242_A	0.876	1.00
53_I	91_F	0.874	1.00
314_E	318_A	0.873	1.00
351_N	354_K	0.870	1.00
315_E	319_L	0.870	1.00
164_V	209_A	0.869	1.00
350_A	354_K	0.864	1.00
247_P	254_D	0.864	1.00
115_T	118_M	0.864	1.00
427_L	436_I	0.863	1.00
316_A	319_L	0.861	1.00
27_L	40_M	0.861	1.00
21_D	43_A	0.858	1.00
236_T	239_D	0.858	1.00
404_E	407_I	0.856	1.00
107_A	121_A	0.855	1.00
427_L	431_L	0.854	1.00
296_E	299_C	0.853	1.00
130_P	214_V	0.851	1.00
359_I	363_Y	0.850	1.00
317_F	321_E	0.846	1.00
316_A	320_T	0.843	1.00
223_L	227_Y	0.842	1.00
378_L	381_T	0.840	1.00
142_G	146_N	0.839	1.00
92_K	140_T	0.837	1.00
72_S	140_T	0.833	1.00
50_T	94_M	0.832	1.00
239_D	302_G	0.831	1.00
111_P	209_A	0.830	1.00
327_L	330_L	0.828	1.00
454_P	457_M	0.828	1.00
22_S	26_R	0.826	1.00
66_P	453_N	0.826	1.00
118_M	141_I	0.826	1.00
292_M	296_E	0.825	1.00
116_L	137_K	0.825	1.00
235_Q	238_S	0.825	1.00
55_R	59_I	0.823	1.00
187_V	190_Y	0.821	1.00
416_E	420_G	0.821	1.00
428_E	436_I	0.820	1.00
145_I	206_V	0.819	1.00
319_L	323_R	0.818	1.00
401_E	404_E	0.816	1.00
315_E	320_T	0.815	1.00
313_E	316_A	0.815	1.00
50_T	53_I	0.811	1.00
323_R	327_L	0.811	1.00
115_T	139_S	0.810	1.00
369_T	374_G	0.809	1.00
348_E	409_L	0.808	1.00
47_P	91_F	0.808	1.00
189_G	446_F	0.805	1.00
186_D	189_G	0.801	1.00
416_E	419_V	0.799	1.00
180_G	186_D	0.797	1.00
286_E	290_R	0.794	1.00
191_D	442_L	0.793	1.00
237_V	241_I	0.793	1.00
442_L	446_F	0.791	1.00
65_V	87_L	0.791	1.00
390_D	394_R	0.789	1.00
324_R	329_A	0.788	1.00
352_M	356_I	0.786	1.00
327_L	331_A	0.785	1.00
191_D	445_A	0.783	1.00
389_K	393_E	0.781	1.00
249_T	253_L	0.780	1.00
227_Y	236_T	0.779	1.00
206_V	209_A	0.779	1.00
127_L	215_P	0.778	1.00
323_R	329_A	0.777	1.00
377_N	381_T	0.774	1.00
247_P	250_L	0.773	1.00
126_G	216_K	0.772	1.00
131_P	163_Y	0.771	1.00
42_D	86_G	0.771	1.00
116_L	136_M	0.769	1.00
231_D	350_A	0.769	1.00
255_Q	274_K	0.769	1.00
369_T	373_A	0.767	1.00
389_K	392_M	0.767	1.00
437_D	444_A	0.766	1.00
318_A	321_E	0.764	1.00
159_V	162_D	0.762	1.00
415_G	418_G	0.760	1.00
311_Q	315_E	0.759	1.00
29_Y	44_V	0.758	1.00
25_G	28_V	0.757	1.00
247_P	251_E	0.756	1.00
443_K	453_N	0.754	1.00
297_A	300_K	0.752	1.00
351_N	357_N	0.750	1.00
231_D	351_N	0.748	1.00
288_V	292_M	0.748	1.00
136_M	139_S	0.748	1.00
248_A	282_D	0.747	1.00
414_T	417_H	0.747	1.00
101_D	108_T	0.746	1.00
106_T	212_K	0.746	1.00
423_K	426_Y	0.745	1.00
286_E	289_E	0.743	1.00
248_A	251_E	0.743	1.00
166_G	208_E	0.742	1.00
425_P	428_E	0.742	1.00
167_L	206_V	0.741	1.00
324_R	327_L	0.740	1.00
360_A	363_Y	0.739	1.00
234_A	238_S	0.737	1.00
57_L	172_A	0.735	1.00
323_R	330_L	0.733	1.00
336_T	339_L	0.731	1.00
428_E	437_D	0.730	1.00
300_K	303_D	0.726	1.00
291_D	294_K	0.725	1.00
281_Q	295_I	0.724	1.00
324_R	330_L	0.724	1.00
284_P	287_T	0.724	1.00
249_T	256_P	0.723	1.00
193_T	197_V	0.722	1.00
337_T	341_D	0.720	1.00
104_N	347_S	0.720	1.00
68_V	86_G	0.719	1.00
44_V	88_V	0.718	1.00
168_E	210_I	0.715	1.00
363_Y	397_Q	0.713	1.00
344_V	352_M	0.709	1.00
167_L	179_T	0.708	1.00
251_E	255_Q	0.707	1.00
59_I	87_L	0.706	1.00
355_A	359_I	0.705	1.00
411_G	415_G	0.703	1.00
120_R	123_E	0.703	1.00
295_I	299_C	0.703	1.00
324_R	331_A	0.703	1.00
341_D	346_R	0.703	1.00
223_L	226_L	0.702	1.00
100_I	125_K	0.701	1.00
450_N	453_N	0.697	1.00
148_N	159_V	0.695	1.00
323_R	328_S	0.691	1.00
395_V	399_F	0.690	1.00
100_I	213_L	0.688	1.00
75_N	80_T	0.688	1.00
47_P	94_M	0.687	1.00
290_R	293_E	0.687	1.00
51_D	176_I	0.686	1.00
20_D	26_R	0.686	1.00
115_T	141_I	0.683	1.00
407_I	429_M	0.680	1.00
260_V	263_D	0.680	1.00
257_T	326_A	0.678	1.00
340_E	343_T	0.678	1.00
94_M	207_T	0.674	1.00
339_L	342_A	0.673	1.00
262_E	265_A	0.671	1.00
47_P	53_I	0.670	1.00
122_V	125_K	0.666	1.00
368_C	371_G	0.666	1.00
20_D	29_Y	0.665	1.00
325_S	330_L	0.665	1.00
169_V	179_T	0.664	1.00
282_D	285_F	0.664	1.00
280_E	283_G	0.662	1.00
247_P	253_L	0.658	1.00
287_T	291_D	0.658	1.00
233_A	237_V	0.657	1.00
308_Q	315_E	0.656	1.00
92_K	114_I	0.656	1.00
329_A	333_L	0.655	1.00
23_N	27_L	0.654	1.00
393_E	396_E	0.654	1.00
251_E	256_P	0.653	1.00
26_R	29_Y	0.653	1.00
299_C	304_A	0.652	1.00
172_A	451_I	0.652	1.00
377_N	380_P	0.649	1.00
54_S	57_L	0.648	1.00
252_F	257_T	0.647	1.00
178_R	188_A	0.646	1.00
105_L	212_K	0.646	1.00
259_L	263_D	0.645	1.00
261_I	264_Y	0.645	1.00
335_P	339_L	0.643	1.00
403_F	407_I	0.642	1.00
179_T	188_A	0.642	1.00
382_C	386_I	0.641	1.00
427_L	430_K	0.641	1.00
326_A	330_L	0.640	1.00
128_F	216_K	0.640	1.00
414_T	418_G	0.638	1.00
175_D	434_E	0.638	1.00
253_L	257_T	0.638	1.00
167_L	197_V	0.637	1.00
367_I	371_G	0.637	1.00
192_L	446_F	0.636	1.00
119_I	128_F	0.634	1.00
52_E	56_I	0.634	1.00
61_S	173_N	0.633	1.00
337_T	340_E	0.633	1.00
69_P	91_F	0.633	1.00
330_L	333_L	0.630	1.00
281_Q	284_P	0.629	1.00
41_P	88_V	0.629	1.00
249_T	252_F	0.628	1.00
323_R	331_A	0.628	1.00
238_S	241_I	0.628	1.00
97_I	109_V	0.625	1.00
314_E	317_F	0.625	1.00
254_D	259_L	0.624	1.00
101_D	105_L	0.624	1.00
319_L	322_A	0.621	1.00
419_V	427_L	0.621	1.00
203_L	442_L	0.621	1.00
324_R	328_S	0.620	1.00
299_C	302_G	0.617	1.00
251_E	257_T	0.616	1.00
180_G	190_Y	0.615	1.00
341_D	345_P	0.614	1.00
20_D	23_N	0.614	1.00
119_I	122_V	0.612	1.00
443_K	447_D	0.610	1.00
273_A	276_V	0.609	1.00
386_I	392_M	0.609	1.00
338_I	341_D	0.605	1.00
109_V	113_V	0.604	1.00
262_E	266_K	0.604	1.00
300_K	304_A	0.604	1.00
97_I	110_Q	0.603	1.00
24_A	28_V	0.603	1.00
115_T	134_S	0.602	1.00
72_S	114_I	0.602	1.00
134_S	144_N	0.600	1.00
372_H	375_D	0.599	1.00
304_A	307_V	0.598	1.00
289_E	296_E	0.597	1.00
30_S	41_P	0.597	1.00
315_E	322_A	0.596	1.00
255_Q	258_L	0.596	1.00
194_R	197_V	0.594	1.00
298_I	302_G	0.593	1.00
102_E	105_L	0.591	1.00
368_C	373_A	0.590	1.00
114_I	140_T	0.590	1.00
329_A	332_R	0.588	1.00
336_T	340_E	0.588	1.00
434_E	437_D	0.588	1.00
392_M	395_V	0.587	1.00
359_I	398_A	0.587	1.00
164_V	211_V	0.587	1.00
236_T	299_C	0.586	1.00
426_Y	429_M	0.585	1.00
177_I	438_A	0.585	1.00
320_T	327_L	0.585	1.00
43_A	65_V	0.585	1.00
340_E	344_V	0.584	1.00
156_K	282_D	0.584	1.00
151_G	154_G	0.583	1.00
325_S	328_S	0.582	1.00
316_A	323_R	0.582	1.00
322_A	327_L	0.580	1.00
360_A	364_D	0.580	1.00
336_T	341_D	0.579	1.00
252_F	256_P	0.578	1.00
354_K	357_N	0.577	1.00
311_Q	314_E	0.577	1.00
66_P	454_P	0.575	1.00
317_F	320_T	0.574	1.00
249_T	255_Q	0.574	1.00
96_Q	99_E	0.573	1.00
334_K	338_I	0.570	1.00
172_A	449_R	0.568	1.00
246_I	250_L	0.568	1.00
369_T	372_H	0.567	1.00
279_I	282_D	0.566	1.00
109_V	209_A	0.566	1.00
339_L	381_T	0.564	1.00
67_I	87_L	0.564	1.00
319_L	326_A	0.564	1.00
310_A	315_E	0.563	1.00
379_H	383_T	0.562	1.00
71_G	142_G	0.562	1.00
328_S	332_R	0.562	1.00
229_N	233_A	0.561	1.00
260_V	264_Y	0.561	1.00
295_I	298_I	0.560	1.00
417_H	421_E	0.560	1.00
411_G	414_T	0.559	1.00
177_I	204_G	0.558	1.00
334_K	340_E	0.558	1.00
240_I	243_A	0.558	1.00
353_V	357_N	0.557	1.00
246_I	249_T	0.555	1.00
358_D	363_Y	0.555	1.00
438_A	445_A	0.554	1.00
246_I	251_E	0.554	1.00
412_T	415_G	0.552	1.00
237_V	240_I	0.552	1.00
334_K	339_L	0.551	1.00
90_L	93_H	0.550	1.00
31_Y	38_Q	0.550	1.00
99_E	106_T	0.550	1.00
265_A	268_G	0.550	1.00
54_S	171_L	0.548	1.00
316_A	324_R	0.547	1.00
154_G	159_V	0.547	1.00
223_L	279_I	0.545	1.00
319_L	324_R	0.544	1.00
436_I	439_M	0.543	1.00
25_G	29_Y	0.543	1.00
275_A	279_I	0.543	1.00
312_T	320_T	0.543	1.00
310_A	313_E	0.539	1.00
372_H	376_G	0.539	1.00
283_G	287_T	0.539	1.00
424_A	428_E	0.538	1.00
417_H	422_M	0.538	1.00
50_T	208_E	0.538	1.00
66_P	451_I	0.537	1.00
317_F	323_R	0.537	1.00
116_L	138_I	0.537	1.00
129_Y	211_V	0.536	1.00
156_K	248_A	0.536	1.00
54_S	207_T	0.535	1.00
419_V	422_M	0.535	1.00
202_T	443_K	0.534	1.00
312_T	316_A	0.533	1.00
381_T	384_T	0.532	1.00
30_S	38_Q	0.532	1.00
247_P	252_F	0.532	1.00
322_A	329_A	0.531	1.00
35_P	38_Q	0.531	1.00
431_L	435_G	0.531	1.00
99_E	102_E	0.530	1.00
250_L	253_L	0.529	1.00
337_T	342_A	0.529	1.00
204_G	446_F	0.529	1.00
406_A	411_G	0.528	1.00
134_S	139_S	0.528	1.00
113_V	141_I	0.526	0.99
352_M	355_A	0.526	0.99
41_P	44_V	0.524	0.99
398_A	401_E	0.524	0.99
334_K	337_T	0.523	0.99
414_T	420_G	0.523	0.99
370_F	373_A	0.522	0.99
179_T	190_Y	0.521	0.99
278_L	282_D	0.520	0.99
336_T	343_T	0.520	0.99
382_C	385_D	0.520	0.99
262_E	268_G	0.519	0.99
234_A	237_V	0.519	0.99
252_F	258_L	0.519	0.99
146_N	196_F	0.518	0.99
422_M	426_Y	0.518	0.99
380_P	383_T	0.518	0.99
324_R	332_R	0.517	0.99
148_N	198_G	0.516	0.99
186_D	430_K	0.516	0.99
314_E	320_T	0.515	0.99
320_T	326_A	0.515	0.99
415_G	419_V	0.515	0.99
68_V	82_P	0.515	0.99
280_E	284_P	0.514	0.99
322_A	325_S	0.511	0.99
324_R	333_L	0.511	0.99
313_E	318_A	0.508	0.99
315_E	321_E	0.508	0.99
39_S	81_C	0.507	0.99
23_N	40_M	0.506	0.99
321_E	324_R	0.506	0.99
119_I	216_K	0.505	0.99
322_A	331_A	0.504	0.99
327_L	333_L	0.504	0.99
254_D	258_L	0.504	0.99
431_L	456_K	0.503	0.99
48_R	94_M	0.503	0.99
323_R	332_R	0.501	0.99
453_N	456_K	0.501	0.99
323_R	333_L	0.500	0.99
305_V	308_Q	0.500	0.99
228_E	305_V	0.500	0.99

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3pm9A	5	0.9723	100	0.255	Contact Map
2uuuA	2	0.9128	100	0.3	Contact Map
4xloA	2	0.934	100	0.325	Contact Map
1wvfA	2	0.9702	100	0.331	Contact Map
4o95A	1	0.8745	100	0.336	Contact Map
1w1oA	1	0.8936	100	0.338	Contact Map
1f0xA	1	0.9234	100	0.339	Contact Map
2bvfA	1	0.9064	100	0.349	Contact Map
2exrA	1	0.9021	100	0.35	Contact Map
4bbyA	2	0.9574	100	0.354	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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