ARAN - BACSU - GREMLIN Contacts

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ARAN - Probable arabinose-binding protein

UniProt:	P94528	Sequences: MKKMTVCFLVLMMLLTLVIAGCSAEKSSGKSGETELTFWTFNGLHEQFYVEMVKEWNKKYPDRKIKLNTVVYPYGQMHDNLSISLIAGEGVPDIADVELARFSNFLKGSDIPLADLTPLIEKDRDKFVEARLTLYSKNGKLYGLDTHVGTTVMFYNMDVMKKAGVNPDDIKTWDDYHKAGQKVRKVTGKPMGTVETNDSATFLSMISQQNSGYFDKNGKLILNNDTNVKTLQYLKDMINDKTMIPAPGGGHHSEEYYGFMNQGGAASVLMPIWYMGRFIDYMPDLKGKIAIRPLPAWKEGGDRSAGLGGTATVVPKQSKHVELAKEFLAFAKGSEEGNKKLWSVLGFDPLRWDVWSSKELKEKNKYTDYFQNGTGIFSVLLDIKDEINPIYLHEDFAKASDLVNRSVLFDALKSQQKTPKQALDRAAGELKQK	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	433 (397)
Sequences:	29970 (24026)
Seq/√Len:	1205.8

ECOLI - YCJN UGPB MALE YDCS YNJB POTF POTD
BACSU - ARAN YURO CYCB YESO YTCQ MSME MDXE LIPO
HALSA - Q9HHQ8 Q9HP00 Q9HR87 Q9HNZ3 Q9HMT5 Q9HR04
SULSO - Q97YY1 Q97ZC3 Q97UZ1 Q97VC2 Q97UF5

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
35_E	66_K	3.825	1.00
418_T	421_Q	3.577	1.00
114_A	321_V	3.416	1.00
228_V	420_K	3.276	1.00
158_D	288_K	3.276	1.00
235_K	239_N	3.141	1.00
37_T	66_K	2.934	1.00
35_E	64_K	2.929	1.00
157_M	290_A	2.928	1.00
115_D	140_K	2.767	1.00
232_Q	236_D	2.757	1.00
177_H	236_D	2.675	1.00
181_Q	240_D	2.591	1.00
236_D	240_D	2.534	1.00
50_V	54_K	2.488	1.00
157_M	161_K	2.480	1.00
172_T	175_D	2.460	1.00
155_Y	290_A	2.443	1.00
63_R	323_L	2.424	1.00
55_E	58_K	2.361	1.00
420_K	424_D	2.358	1.00
57_N	64_K	2.261	1.00
56_W	326_E	2.243	1.00
225_D	229_K	2.233	1.00
424_D	428_G	2.220	1.00
76_Q	79_D	2.198	1.00
136_S	141_L	2.178	1.00
160_M	267_S	2.171	1.00
326_E	329_A	2.166	1.00
178_K	182_K	2.144	1.00
223_N	424_D	2.084	1.00
165_V	179_A	2.071	1.00
51_E	54_K	2.066	1.00
320_H	323_L	2.065	1.00
117_T	140_K	2.060	1.00
129_E	133_T	2.052	1.00
37_T	68_N	2.049	1.00
33_E	64_K	2.044	1.00
378_S	382_D	2.035	1.00
181_Q	185_K	2.034	1.00
417_K	425_R	2.021	1.00
55_E	330_F	1.985	1.00
333_G	337_G	1.970	1.00
39_W	84_S	1.958	1.00
158_D	162_K	1.958	1.00
252_H	255_E	1.945	1.00
175_D	178_K	1.906	1.00
232_Q	419_P	1.902	1.00
229_K	232_Q	1.891	1.00
126_K	353_D	1.871	1.00
410_D	417_K	1.855	1.00
54_K	58_K	1.848	1.00
215_D	219_K	1.833	1.00
133_T	136_S	1.801	1.00
14_L	17_L	1.792	1.00
113_L	313_V	1.771	1.00
93_D	320_H	1.763	1.00
119_L	325_K	1.760	1.00
178_K	181_Q	1.745	1.00
170_I	175_D	1.739	1.00
322_E	326_E	1.715	1.00
182_K	186_V	1.706	1.00
55_E	59_K	1.702	1.00
410_D	416_Q	1.685	1.00
339_K	343_S	1.683	1.00
401_D	405_R	1.673	1.00
53_V	57_N	1.672	1.00
232_Q	420_K	1.662	1.00
55_E	340_K	1.658	1.00
57_N	61_P	1.657	1.00
34_T	323_L	1.656	1.00
95_A	315_P	1.652	1.00
174_D	177_H	1.645	1.00
15_L	18_V	1.639	1.00
421_Q	425_R	1.633	1.00
53_V	327_F	1.632	1.00
143_G	311_A	1.625	1.00
73_P	76_Q	1.623	1.00
54_K	57_N	1.622	1.00
411_A	422_A	1.610	1.00
228_V	232_Q	1.593	1.00
228_V	419_P	1.560	1.00
115_D	118_P	1.551	1.00
135_Y	311_A	1.543	1.00
177_H	240_D	1.533	1.00
153_M	292_R	1.528	1.00
425_R	429_E	1.523	1.00
177_H	181_Q	1.515	1.00
46_E	50_V	1.514	1.00
155_Y	292_R	1.512	1.00
171_K	175_D	1.508	1.00
159_V	266_A	1.502	1.00
157_M	288_K	1.490	1.00
177_H	237_M	1.483	1.00
51_E	55_E	1.478	1.00
421_Q	424_D	1.466	1.00
85_L	91_V	1.453	1.00
260_M	289_I	1.443	1.00
425_R	428_G	1.438	1.00
424_D	427_A	1.437	1.00
114_A	316_K	1.428	1.00
235_K	411_A	1.428	1.00
417_K	422_A	1.421	1.00
402_L	429_E	1.415	1.00
223_N	427_A	1.414	1.00
183_V	266_A	1.413	1.00
80_N	84_S	1.411	1.00
181_Q	242_T	1.410	1.00
259_F	264_G	1.400	1.00
159_V	183_V	1.399	1.00
174_D	178_K	1.398	1.00
337_G	340_K	1.380	1.00
340_K	344_V	1.376	1.00
33_E	62_D	1.375	1.00
34_T	320_H	1.375	1.00
56_W	63_R	1.372	1.00
56_W	330_F	1.366	1.00
314_V	328_L	1.366	1.00
226_T	229_K	1.360	1.00
233_Y	237_M	1.358	1.00
56_W	327_F	1.331	1.00
40_T	67_L	1.330	1.00
106_L	142_Y	1.328	1.00
233_Y	236_D	1.325	1.00
161_K	167_P	1.310	1.00
191_M	195_E	1.308	1.00
180_G	267_S	1.300	1.00
318_S	321_V	1.294	1.00
411_A	419_P	1.278	1.00
163_A	183_V	1.276	1.00
53_V	67_L	1.268	1.00
382_D	385_D	1.266	1.00
63_R	326_E	1.260	1.00
236_D	239_N	1.252	1.00
152_V	291_I	1.248	1.00
406_S	417_K	1.247	1.00
12_M	16_T	1.232	1.00
167_P	171_K	1.226	1.00
47_Q	50_V	1.226	1.00
177_H	233_Y	1.222	1.00
323_L	326_E	1.220	1.00
153_M	267_S	1.214	1.00
406_S	425_R	1.210	1.00
135_Y	141_L	1.194	1.00
184_R	242_T	1.190	1.00
406_S	410_D	1.186	1.00
165_V	182_K	1.186	1.00
94_I	328_L	1.178	1.00
318_S	324_A	1.166	1.00
160_M	165_V	1.166	1.00
123_D	329_A	1.150	1.00
179_A	182_K	1.147	1.00
330_F	337_G	1.147	1.00
174_D	298_K	1.147	1.00
109_S	316_K	1.138	1.00
417_K	421_Q	1.136	1.00
333_G	336_E	1.132	1.00
327_F	331_A	1.130	1.00
374_T	378_S	1.128	1.00
161_K	166_N	1.127	1.00
325_K	329_A	1.124	1.00
118_P	121_E	1.113	1.00
97_V	313_V	1.113	1.00
156_N	159_V	1.111	1.00
158_D	287_G	1.109	1.00
106_L	137_K	1.108	1.00
94_I	324_A	1.102	1.00
258_G	262_Q	1.090	1.00
192_G	195_E	1.090	1.00
160_M	179_A	1.084	1.00
93_D	318_S	1.083	1.00
353_D	356_S	1.082	1.00
36_L	327_F	1.081	1.00
11_L	14_L	1.079	1.00
47_Q	51_E	1.076	1.00
56_W	323_L	1.072	1.00
176_Y	180_G	1.071	1.00
180_G	242_T	1.068	1.00
11_L	15_L	1.068	1.00
156_N	287_G	1.065	1.00
327_F	330_F	1.065	1.00
225_D	228_V	1.061	1.00
11_L	17_L	1.058	1.00
16_T	19_I	1.057	1.00
7_C	14_L	1.056	1.00
124_R	132_L	1.056	1.00
410_D	425_R	1.055	1.00
159_V	162_K	1.054	1.00
229_K	233_Y	1.048	1.00
159_V	163_A	1.040	1.00
132_L	136_S	1.039	1.00
81_L	95_A	1.038	1.00
406_S	426_A	1.036	1.00
316_K	321_V	1.035	1.00
314_V	325_K	1.034	1.00
255_E	258_G	1.025	1.00
315_P	318_S	1.023	1.00
235_K	419_P	1.021	1.00
314_V	324_A	1.019	1.00
15_L	19_I	1.019	1.00
321_V	325_K	1.012	1.00
176_Y	267_S	1.007	1.00
34_T	62_D	1.004	1.00
88_G	317_Q	1.004	1.00
114_A	318_S	1.003	1.00
187_T	190_P	1.001	1.00
38_F	312_T	0.993	1.00
405_R	429_E	0.992	1.00
65_I	327_F	0.990	1.00
228_V	423_L	0.986	1.00
85_L	112_P	0.986	1.00
334_S	339_K	0.984	1.00
95_A	313_V	0.981	1.00
206_I	211_S	0.980	1.00
94_I	327_F	0.979	1.00
358_K	362_E	0.977	1.00
19_I	22_C	0.977	1.00
259_F	265_A	0.977	1.00
121_E	124_R	0.977	1.00
10_V	14_L	0.976	1.00
22_C	25_E	0.975	1.00
402_L	405_R	0.974	1.00
340_K	343_S	0.970	1.00
182_K	185_K	0.966	1.00
351_R	354_V	0.965	1.00
232_Q	235_K	0.964	1.00
57_N	62_D	0.961	1.00
53_V	65_I	0.955	1.00
209_Q	229_K	0.954	1.00
163_A	186_V	0.953	1.00
179_A	267_S	0.949	1.00
18_V	21_G	0.949	1.00
80_N	83_I	0.948	1.00
126_K	351_R	0.946	1.00
52_M	55_E	0.946	1.00
165_V	183_V	0.945	1.00
277_R	280_D	0.944	1.00
231_L	411_A	0.942	1.00
398_K	401_D	0.938	1.00
406_S	429_E	0.932	1.00
158_D	161_K	0.930	1.00
336_E	339_K	0.929	1.00
270_M	274_Y	0.929	1.00
212_G	215_D	0.928	1.00
379_V	382_D	0.923	1.00
339_K	354_V	0.922	1.00
51_E	344_V	0.920	1.00
132_L	141_L	0.919	1.00
14_L	18_V	0.916	1.00
51_E	340_K	0.915	1.00
405_R	410_D	0.914	1.00
39_W	70_V	0.910	1.00
336_E	340_K	0.909	1.00
206_I	227_N	0.907	1.00
78_H	101_R	0.904	1.00
13_M	16_T	0.898	1.00
22_C	26_K	0.893	1.00
83_I	87_A	0.888	1.00
129_E	352_W	0.886	1.00
422_A	426_A	0.886	1.00
55_E	336_E	0.884	1.00
185_K	188_G	0.876	1.00
220_L	427_A	0.876	1.00
222_L	227_N	0.875	1.00
154_F	270_M	0.875	1.00
418_T	422_A	0.872	1.00
8_F	15_L	0.871	1.00
10_V	17_L	0.865	1.00
413_K	416_Q	0.862	1.00
143_G	313_V	0.856	1.00
12_M	18_V	0.854	1.00
39_W	92_P	0.854	1.00
10_V	16_T	0.853	1.00
95_A	113_L	0.853	1.00
59_K	336_E	0.850	1.00
38_F	94_I	0.849	1.00
117_T	121_E	0.849	1.00
7_C	17_L	0.848	1.00
128_V	352_W	0.846	1.00
36_L	323_L	0.846	1.00
7_C	10_V	0.845	1.00
59_K	333_G	0.843	1.00
358_K	361_K	0.838	1.00
375_G	378_S	0.836	1.00
161_K	288_K	0.834	1.00
402_L	426_A	0.834	1.00
163_A	167_P	0.831	1.00
177_H	242_T	0.824	1.00
146_T	312_T	0.823	1.00
384_K	387_I	0.820	1.00
221_I	224_N	0.819	1.00
160_M	183_V	0.818	1.00
114_A	315_P	0.818	1.00
129_E	132_L	0.817	1.00
324_A	328_L	0.817	1.00
12_M	15_L	0.815	1.00
117_T	141_L	0.814	1.00
10_V	13_M	0.813	1.00
423_L	427_A	0.812	1.00
163_A	182_K	0.811	1.00
127_F	332_K	0.806	1.00
113_L	142_Y	0.806	1.00
55_E	337_G	0.806	1.00
119_L	322_E	0.805	1.00
106_L	113_L	0.804	1.00
314_V	318_S	0.800	1.00
231_L	422_A	0.800	1.00
401_D	404_N	0.796	1.00
339_K	357_S	0.793	1.00
357_S	360_L	0.792	1.00
84_S	89_E	0.788	1.00
114_A	118_P	0.787	1.00
155_Y	167_P	0.786	1.00
36_L	320_H	0.783	1.00
334_S	337_G	0.782	1.00
171_K	296_A	0.782	1.00
423_L	426_A	0.781	1.00
91_V	315_P	0.780	1.00
241_K	245_P	0.779	1.00
322_E	325_K	0.779	1.00
117_T	136_S	0.774	1.00
231_L	423_L	0.772	1.00
184_R	192_G	0.771	1.00
237_M	242_T	0.771	1.00
212_G	216_K	0.769	1.00
244_I	247_P	0.765	1.00
215_D	221_I	0.763	1.00
34_T	63_R	0.763	1.00
115_D	142_Y	0.762	1.00
70_V	80_N	0.760	1.00
11_L	18_V	0.760	1.00
207_S	388_N	0.756	1.00
402_L	406_S	0.752	1.00
13_M	17_L	0.752	1.00
62_D	326_E	0.750	1.00
119_L	123_D	0.750	1.00
180_G	184_R	0.747	1.00
57_N	65_I	0.747	1.00
48_F	51_E	0.745	1.00
183_V	188_G	0.742	1.00
114_A	119_L	0.741	1.00
183_V	187_T	0.738	1.00
118_P	325_K	0.738	1.00
108_G	112_P	0.738	1.00
166_N	171_K	0.737	1.00
258_G	261_N	0.737	1.00
167_P	170_I	0.736	1.00
204_S	207_S	0.736	1.00
59_K	330_F	0.736	1.00
224_N	227_N	0.736	1.00
52_M	337_G	0.736	1.00
354_V	357_S	0.735	1.00
7_C	11_L	0.735	1.00
186_V	190_P	0.732	1.00
156_N	288_K	0.731	1.00
163_A	266_A	0.731	1.00
400_S	404_N	0.728	1.00
13_M	18_V	0.727	1.00
114_A	314_V	0.725	1.00
254_E	257_Y	0.723	1.00
209_Q	233_Y	0.723	1.00
177_H	180_G	0.722	1.00
403_V	426_A	0.717	1.00
202_F	206_I	0.715	1.00
136_S	139_G	0.715	1.00
130_A	133_T	0.710	1.00
52_M	330_F	0.709	1.00
152_V	380_L	0.704	1.00
296_A	299_E	0.702	1.00
165_V	170_I	0.701	1.00
21_G	24_A	0.701	1.00
411_A	417_K	0.693	1.00
184_R	241_K	0.692	1.00
7_C	18_V	0.687	1.00
173_W	233_Y	0.685	1.00
120_I	141_L	0.685	1.00
39_W	68_N	0.685	1.00
36_L	324_A	0.685	1.00
381_L	385_D	0.684	1.00
33_E	61_P	0.680	1.00
254_E	258_G	0.678	1.00
120_I	123_D	0.677	1.00
276_G	280_D	0.677	1.00
334_S	353_D	0.676	1.00
94_I	312_T	0.675	1.00
127_F	132_L	0.672	1.00
184_R	190_P	0.672	1.00
8_F	12_M	0.672	1.00
105_F	113_L	0.671	1.00
29_G	32_G	0.670	1.00
104_N	108_G	0.669	1.00
297_W	300_G	0.669	1.00
179_A	183_V	0.668	1.00
79_D	83_I	0.668	1.00
359_E	362_E	0.668	1.00
8_F	11_L	0.666	1.00
275_M	279_I	0.666	1.00
162_K	188_G	0.665	1.00
57_N	63_R	0.659	1.00
378_S	381_L	0.659	1.00
261_N	281_Y	0.656	1.00
189_K	264_G	0.655	1.00
422_A	425_R	0.653	1.00
329_A	333_G	0.652	1.00
184_R	187_T	0.652	1.00
395_D	398_K	0.652	1.00
166_N	179_A	0.652	1.00
20_A	24_A	0.651	1.00
176_Y	193_T	0.651	1.00
155_Y	160_M	0.651	1.00
118_P	140_K	0.649	1.00
9_L	16_T	0.646	1.00
406_S	422_A	0.646	1.00
85_L	315_P	0.645	1.00
114_A	325_K	0.645	1.00
43_G	47_Q	0.645	1.00
244_I	259_F	0.644	1.00
211_S	227_N	0.643	1.00
224_N	228_V	0.642	1.00
163_A	179_A	0.640	1.00
405_R	409_F	0.639	1.00
173_W	177_H	0.638	1.00
256_Y	268_V	0.637	1.00
181_Q	184_R	0.636	1.00
234_L	238_I	0.635	1.00
119_L	122_K	0.635	1.00
191_M	194_V	0.635	1.00
183_V	267_S	0.632	1.00
352_W	356_S	0.632	1.00
8_F	18_V	0.631	1.00
124_R	136_S	0.628	1.00
114_A	317_Q	0.626	1.00
118_P	122_K	0.625	1.00
102_F	143_G	0.625	1.00
239_N	242_T	0.624	1.00
321_V	324_A	0.623	1.00
170_I	179_A	0.623	1.00
409_F	413_K	0.623	1.00
221_I	427_A	0.622	1.00
8_F	14_L	0.622	1.00
194_V	265_A	0.621	1.00
123_D	325_K	0.621	1.00
20_A	23_S	0.620	1.00
235_K	238_I	0.620	1.00
154_F	291_I	0.619	1.00
379_V	383_I	0.616	1.00
135_Y	143_G	0.616	1.00
159_V	188_G	0.615	1.00
9_L	15_L	0.615	1.00
128_V	355_W	0.614	1.00
396_F	400_S	0.611	1.00
119_L	321_V	0.611	1.00
77_M	81_L	0.610	1.00
207_S	212_G	0.609	1.00
9_L	12_M	0.609	1.00
102_F	106_L	0.608	1.00
6_V	13_M	0.608	1.00
259_F	262_Q	0.607	1.00
162_K	186_V	0.607	1.00
59_K	326_E	0.606	1.00
419_P	423_L	0.605	1.00
420_K	423_L	0.602	1.00
198_D	201_T	0.602	1.00
103_S	107_K	0.601	1.00
82_S	104_N	0.600	1.00
56_W	61_P	0.600	1.00
382_D	386_E	0.598	1.00
52_M	340_K	0.598	1.00
59_K	62_D	0.597	1.00
125_D	128_V	0.596	1.00
21_G	25_E	0.596	1.00
68_N	84_S	0.595	1.00
9_L	13_M	0.595	1.00
52_M	331_A	0.593	1.00
191_M	245_P	0.593	1.00
38_F	67_L	0.590	1.00
188_G	191_M	0.590	1.00
78_H	104_N	0.589	1.00
12_M	17_L	0.588	1.00
229_K	297_W	0.587	1.00
277_R	281_Y	0.585	1.00
17_L	20_A	0.585	1.00
375_G	379_V	0.581	1.00
355_W	358_K	0.579	1.00
226_T	230_T	0.579	1.00
190_P	264_G	0.578	1.00
68_N	80_N	0.577	1.00
101_R	104_N	0.575	1.00
37_T	93_D	0.575	1.00
153_M	269_L	0.574	1.00
31_S	62_D	0.574	1.00
76_Q	80_N	0.572	1.00
16_T	20_A	0.572	1.00
91_V	317_Q	0.570	1.00
224_N	427_A	0.570	1.00
380_L	384_K	0.570	1.00
56_W	65_I	0.568	1.00
357_S	361_K	0.568	1.00
296_A	300_G	0.566	1.00
180_G	237_M	0.566	1.00
156_N	263_G	0.564	1.00
183_V	186_V	0.564	1.00
149_G	310_T	0.564	1.00
25_E	28_S	0.563	1.00
189_K	192_G	0.563	1.00
312_T	328_L	0.562	1.00
32_G	62_D	0.561	1.00
376_I	379_V	0.561	1.00
235_K	418_T	0.561	1.00
260_M	287_G	0.561	1.00
251_H	259_F	0.561	1.00
102_F	113_L	0.558	1.00
97_V	105_F	0.558	1.00
230_T	234_L	0.557	1.00
209_Q	230_T	0.557	1.00
128_V	131_R	0.556	1.00
188_G	192_G	0.554	1.00
186_V	189_K	0.554	1.00
160_M	167_P	0.553	1.00
279_I	289_I	0.553	1.00
206_I	230_T	0.549	1.00
132_L	145_D	0.549	1.00
171_K	176_Y	0.549	1.00
376_I	380_L	0.548	1.00
116_L	328_L	0.548	1.00
255_E	259_F	0.548	1.00
34_T	61_P	0.548	1.00
205_M	230_T	0.548	1.00
215_D	218_G	0.547	1.00
181_Q	236_D	0.547	1.00
6_V	17_L	0.546	1.00
18_V	22_C	0.546	1.00
38_F	53_V	0.545	1.00
203_L	207_S	0.543	1.00
410_D	422_A	0.541	1.00
227_N	427_A	0.540	1.00
229_K	298_K	0.539	1.00
37_T	92_P	0.539	1.00
161_K	164_G	0.538	1.00
117_T	325_K	0.538	1.00
6_V	9_L	0.538	1.00
334_S	351_R	0.536	1.00
312_T	331_A	0.536	1.00
79_D	82_S	0.536	1.00
31_S	34_T	0.535	1.00
84_S	92_P	0.534	1.00
419_P	422_A	0.533	1.00
385_D	388_N	0.532	1.00
338_N	350_L	0.531	1.00
33_E	63_R	0.531	1.00
78_H	105_F	0.529	1.00
325_K	328_L	0.528	1.00
154_F	275_M	0.527	1.00
171_K	179_A	0.527	1.00
160_M	266_A	0.525	1.00
163_A	187_T	0.525	1.00
74_Y	78_H	0.524	1.00
158_D	263_G	0.524	1.00
256_Y	265_A	0.523	1.00
36_L	94_I	0.521	1.00
397_A	401_D	0.520	1.00
106_L	109_S	0.520	1.00
64_K	67_L	0.519	1.00
170_I	292_R	0.519	1.00
223_N	420_K	0.519	1.00
154_F	289_I	0.519	1.00
61_P	323_L	0.519	1.00
17_L	21_G	0.516	1.00
167_P	179_A	0.514	1.00
174_D	233_Y	0.514	1.00
112_P	115_D	0.513	1.00
36_L	93_D	0.513	1.00
37_T	84_S	0.513	1.00
296_A	303_R	0.512	1.00
274_Y	278_F	0.512	1.00
144_L	328_L	0.511	1.00
290_A	293_P	0.511	1.00
167_P	290_A	0.511	1.00
93_D	319_K	0.511	1.00
36_L	65_I	0.510	1.00
10_V	15_L	0.509	1.00
410_D	414_S	0.508	1.00
257_Y	270_M	0.508	1.00
166_N	170_I	0.508	1.00
387_I	390_I	0.507	1.00
228_V	424_D	0.507	1.00
49_Y	52_M	0.507	1.00
237_M	243_M	0.507	1.00
175_D	179_A	0.506	1.00
124_R	127_F	0.506	1.00
44_L	47_Q	0.506	1.00
377_F	381_L	0.503	1.00
216_K	219_K	0.503	1.00
260_M	268_V	0.502	1.00
406_S	411_A	0.502	1.00
352_W	355_W	0.500	1.00

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3uorA	1	0.8684	100	0.126	Contact Map
4r9fA	1	0.873	100	0.153	Contact Map
4r2fA	1	0.8637	100	0.154	Contact Map
4mfiA	1	0.8776	100	0.158	Contact Map
3vxbA	1	0.8637	100	0.19	Contact Map
4r6kA	1	0.8776	100	0.19	Contact Map
2z8fA	3	0.8891	100	0.212	Contact Map
4c1uA	1	0.8661	100	0.216	Contact Map
1eu8A	1	0.8845	100	0.221	Contact Map
4ovjA	1	0.8799	100	0.222	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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