YCNB - BACSU - GREMLIN Contacts

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YCNB - Uncharacterized MFS-type transporter YcnB

UniProt:	P94422	Sequences: MNTSIEQKPFNRSVIVGILLAGAFVAILNQTLLITALPHIMRDFNVDANQAQWLTTSFMLTNGILIPITAFLIEKFTSRALLITAMSIFTAGTVVGAFAPNFPVLLTARIIQAAGAGIMMPLMQTVFLTIFPIEKRGQAMGMVGLVISFAPAIGPTLSGWAVEAFSWRSLFYIILPFAVIDLILASILMKNVTTLRKTQIDILSVILSTFGFGGLLYGFSSVGSYGWSSSTVLISLLVGVIALLLFITRQMKLKKPMLEFRVFTFGVFSLTTLLGTLVFALLIGTETILPLYTQNVRDVTAFDTGLMLLPGAVVMGFMSPIIGRIFDRVGGRGLAIAGFCIIFLTSLPFMQLTDHTSLAWIVVLYTVRLLGTAMIMMPVTTAGINALPRHLIPHGTAMNNTIRQVGGSIGTALLVSVMSNQAAHAGTTNVKHAALHGMNAAFIVAAVIALVGFLLSFTLKKPQRPAEQQPAR	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	472 (413)
Sequences:	70914 (52175)
Seq/√Len:	2567.3

ECOLI - EMRB MDTD HSRA EMRY YEBQ NANT YDJE RHMT UHPT XYLE GALP ARAE YJJL UHPC PROP YAAU MDTM YDJK MDTG MDFA MHPT YGCS GARP GLPT YIHN EXUT GUDP SOTB SHIA YDHP YQCE ENTS DGOT BCR YJHB YAJR KGTP MDTL YHJE YHJX NEPI MDTH EMRD YDIN SETC YDFJ TSGA YDIM ARAJ NARU YDEE YNFM XAPB NUPG YDHC YHHS YGAY NARK FUCP SETB YBJJ YIHO FSR AMPG CYNX SETA LPLT UIDB YIHP YEAN LACY YJIJ YEGT YFCJ MELB YCAD YICJ YAGG HCAT
BACSU - YCNB YHCA LMRB BMR3 YUBD YUSP YFIU MMR TCRB YWOD YVKA YNCC CSBC ARAE YBFB EXUT IOLT GLPT YFIG YVMA YWTG YYBO YYAJ YJBB YTBD YWFA YFHI NAIP GUDP YHJO YCXA YFIS YFNC BMR2 NASA YYBF IOLF YITG YYCB YXAM YDDS YKUC YBCL PBUE YVQJ YDGK YFKL YWOG YFMO YDEG BMR1 YQJV BBEX NARK YCEJ YUXJ YFMI YFKF YOAB YXLH CSBX YDER GLCP GUTA YQGE YJMB YWBF YTTB YNAJ YXIO
HALSA - O54630 Q9HSM8 Q9HN67 Q9HPD6 Q9HRX5 Q9HS33 Q9HMR5 Q9HSK3 Q9HMQ8 Q9HSE5
SULSO - Q97VC8 Q97U91 Q97WR9 Q97X47 Q97YH0 Q97Y15 Q97YY8 Q97VB9 Q97WR1 Q7LX65 Q97U99 Q97VV2 Q97VU3 Q97U80 Q7LX71 Q97YL8 Q97U43 Q97U98 Q97UY7 Q97UD8 Q97Y43 Q97V89 Q97UR4 Q97WS7 Q97VT2 Q97VB7 Q97Y11 Q97U76 Q97WT1 Q980K3 Q97XW7 Q97X63 Q97X92 Q97ZC9 Q97Z36 Q97YG2 Q97VQ5 Q97X02 Q97VD1 Q97Z05 Q97Z07 Q97UJ4 Q97WP8 Q97UK1 Q97YI4 Q97WJ7 Q97U71 Q97YW8

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
100_P	104_V	5.516	1.00
88_I	115_G	4.087	1.00
90_T	178_A	4.023	1.00
95_V	108_A	3.666	1.00
97_A	172_Y	3.651	1.00
103_P	107_T	3.547	1.00
78_S	129_T	3.184	1.00
61_T	110_I	3.178	1.00
101_N	104_V	3.108	1.00
92_G	108_A	2.670	1.00
276_T	406_G	2.660	1.00
92_G	115_G	2.659	1.00
387_L	395_G	2.645	1.00
300_T	303_D	2.583	1.00
280_A	410_G	2.574	1.00
102_F	106_L	2.567	1.00
348_P	364_L	2.534	1.00
47_D	50_Q	2.473	1.00
12_R	135_K	2.461	1.00
65_L	114_A	2.433	1.00
69_T	118_I	2.416	1.00
314_V	366_T	2.409	1.00
57_S	110_I	2.398	1.00
318_M	370_L	2.355	1.00
443_I	447_V	2.348	1.00
137_G	327_D	2.341	1.00
359_A	363_V	2.306	1.00
20_L	146_V	2.266	1.00
85_A	118_I	2.265	1.00
131_F	139_A	2.262	1.00
92_G	111_I	2.238	1.00
135_K	138_Q	2.233	1.00
83_I	186_S	2.197	1.00
46_V	102_F	2.185	1.00
54_L	105_L	2.144	1.00
99_A	104_V	2.111	1.00
74_E	393_P	2.088	1.00
96_G	108_A	2.085	1.00
388_P	391_L	2.070	1.00
261_R	264_T	2.069	1.00
50_Q	102_F	2.055	1.00
94_V	175_L	2.028	1.00
165_F	169_S	1.994	1.00
183_I	187_I	1.985	1.00
99_A	108_A	1.956	1.00
284_G	414_L	1.952	1.00
132_P	135_K	1.945	1.00
104_V	108_A	1.935	1.00
65_L	117_G	1.911	1.00
201_D	204_S	1.903	1.00
87_S	182_L	1.884	1.00
57_S	106_L	1.866	1.00
83_I	182_L	1.861	1.00
272_T	402_I	1.847	1.00
357_S	360_W	1.830	1.00
324_R	328_R	1.796	1.00
73_I	122_L	1.776	1.00
96_G	105_L	1.772	1.00
261_R	391_L	1.758	1.00
72_L	81_L	1.734	1.00
46_V	50_Q	1.705	1.00
79_R	83_I	1.687	1.00
185_A	189_M	1.685	1.00
281_L	449_A	1.664	1.00
166_S	169_S	1.647	1.00
203_L	249_R	1.645	1.00
345_T	364_L	1.630	1.00
161_A	169_S	1.616	1.00
39_H	42_R	1.603	1.00
283_I	407_G	1.597	1.00
72_L	76_F	1.594	1.00
338_G	374_M	1.582	1.00
323_G	327_D	1.576	1.00
350_M	443_I	1.565	1.00
95_V	98_F	1.562	1.00
90_T	182_L	1.558	1.00
341_I	371_G	1.546	1.00
71_F	75_K	1.537	1.00
345_T	371_G	1.534	1.00
333_G	336_I	1.532	1.00
84_T	88_I	1.496	1.00
90_T	175_L	1.475	1.00
440_A	444_V	1.466	1.00
88_I	92_G	1.464	1.00
294_Q	304_T	1.462	1.00
41_M	51_A	1.450	1.00
163_E	302_F	1.449	1.00
219_F	222_V	1.443	1.00
94_V	98_F	1.436	1.00
314_V	318_M	1.436	1.00
22_G	82_L	1.435	1.00
103_P	106_L	1.425	1.00
222_V	227_W	1.410	1.00
303_D	306_L	1.400	1.00
343_F	453_F	1.399	1.00
36_A	162_V	1.399	1.00
343_F	347_L	1.392	1.00
259_E	391_L	1.392	1.00
244_L	248_T	1.388	1.00
299_V	303_D	1.377	1.00
83_I	185_A	1.372	1.00
322_I	374_M	1.368	1.00
91_A	95_V	1.359	1.00
184_L	188_L	1.345	1.00
343_F	450_L	1.342	1.00
258_L	261_R	1.333	1.00
16_V	131_F	1.332	1.00
80_A	84_T	1.330	1.00
73_I	78_S	1.328	1.00
60_L	408_S	1.323	1.00
61_T	65_L	1.318	1.00
292_Y	297_R	1.315	1.00
90_T	179_V	1.314	1.00
21_A	181_D	1.310	1.00
100_P	168_R	1.295	1.00
345_T	368_R	1.294	1.00
80_A	191_N	1.285	1.00
133_I	136_R	1.283	1.00
70_A	74_E	1.282	1.00
440_A	443_I	1.276	1.00
58_F	116_A	1.275	1.00
128_L	136_R	1.271	1.00
217_Y	221_S	1.269	1.00
160_W	164_A	1.267	1.00
24_F	150_A	1.266	1.00
347_L	351_Q	1.266	1.00
36_A	170_L	1.266	1.00
92_G	112_Q	1.266	1.00
77_T	80_A	1.264	1.00
269_S	273_L	1.260	1.00
32_L	170_L	1.254	1.00
138_Q	327_D	1.252	1.00
29_N	32_L	1.251	1.00
263_F	269_S	1.241	1.00
169_S	176_P	1.228	1.00
325_I	329_V	1.227	1.00
311_G	369_L	1.225	1.00
454_L	458_T	1.223	1.00
299_V	307_M	1.215	1.00
172_Y	176_P	1.214	1.00
321_I	324_R	1.213	1.00
53_W	57_S	1.210	1.00
27_I	147_I	1.206	1.00
359_A	362_V	1.190	1.00
15_I	130_I	1.189	1.00
268_F	272_T	1.179	1.00
76_F	81_L	1.175	1.00
350_M	446_A	1.174	1.00
340_C	453_F	1.173	1.00
330_G	333_G	1.165	1.00
363_V	367_V	1.157	1.00
107_T	111_I	1.157	1.00
43_D	168_R	1.155	1.00
13_S	17_G	1.154	1.00
95_V	104_V	1.153	1.00
193_T	196_R	1.150	1.00
37_L	51_A	1.138	1.00
176_P	180_I	1.120	1.00
221_S	225_Y	1.120	1.00
340_C	344_L	1.118	1.00
348_P	351_Q	1.109	1.00
333_G	337_A	1.106	1.00
339_F	452_G	1.106	1.00
63_G	408_S	1.102	1.00
80_A	83_I	1.101	1.00
421_Q	440_A	1.099	1.00
39_H	43_D	1.093	1.00
83_I	87_S	1.088	1.00
406_G	410_G	1.088	1.00
257_M	261_R	1.086	1.00
363_V	366_T	1.085	1.00
249_R	253_L	1.084	1.00
127_F	143_V	1.082	1.00
57_S	61_T	1.080	1.00
43_D	167_W	1.080	1.00
202_I	206_I	1.078	1.00
78_S	191_N	1.077	1.00
12_R	131_F	1.071	1.00
18_I	181_D	1.070	1.00
358_L	362_V	1.062	1.00
61_T	113_A	1.060	1.00
157_L	160_W	1.059	1.00
74_E	394_H	1.059	1.00
104_V	107_T	1.057	1.00
79_R	186_S	1.054	1.00
169_S	172_Y	1.053	1.00
74_E	78_S	1.052	1.00
347_L	446_A	1.052	1.00
85_A	115_G	1.050	1.00
97_A	168_R	1.048	1.00
14_V	188_L	1.047	1.00
324_R	327_D	1.045	1.00
332_R	336_I	1.045	1.00
93_T	174_I	1.043	1.00
65_L	68_I	1.042	1.00
331_G	385_N	1.042	1.00
96_G	171_F	1.038	1.00
182_L	186_S	1.036	1.00
443_I	446_A	1.034	1.00
54_L	102_F	1.032	1.00
439_N	443_I	1.029	1.00
22_G	119_M	1.029	1.00
257_M	260_F	1.028	1.00
450_L	454_L	1.021	1.00
98_F	172_Y	1.016	1.00
41_M	48_A	1.015	1.00
444_V	448_I	1.013	1.00
277_L	452_G	1.010	1.00
416_S	420_N	1.009	1.00
289_L	365_Y	1.005	1.00
266_G	270_L	1.005	1.00
22_G	86_M	0.998	1.00
336_I	453_F	0.997	1.00
200_I	205_V	0.996	1.00
266_G	269_S	0.995	1.00
383_G	399_N	0.989	1.00
29_N	109_R	0.987	1.00
200_I	203_L	0.987	1.00
18_I	188_L	0.987	1.00
56_T	408_S	0.974	1.00
447_V	451_V	0.972	1.00
77_T	81_L	0.970	1.00
345_T	367_V	0.964	1.00
320_P	324_R	0.960	1.00
275_G	399_N	0.958	1.00
86_M	182_L	0.957	1.00
256_P	259_E	0.955	1.00
82_L	126_V	0.952	1.00
342_I	449_A	0.950	1.00
303_D	307_M	0.950	1.00
138_Q	142_M	0.948	1.00
278_V	375_I	0.946	1.00
191_N	195_L	0.946	1.00
58_F	62_N	0.939	1.00
138_Q	324_R	0.936	1.00
268_F	387_L	0.934	1.00
272_T	398_M	0.934	1.00
129_T	392_I	0.933	1.00
338_G	371_G	0.931	1.00
134_E	138_Q	0.929	1.00
93_T	112_Q	0.929	1.00
36_A	40_I	0.928	1.00
421_Q	425_A	0.928	1.00
265_F	391_L	0.924	1.00
58_F	113_A	0.923	1.00
163_E	300_T	0.915	1.00
294_Q	301_A	0.914	1.00
199_Q	203_L	0.913	1.00
334_L	337_A	0.913	1.00
352_L	364_L	0.906	1.00
156_T	309_L	0.903	1.00
452_G	456_S	0.901	1.00
218_G	222_V	0.900	1.00
325_I	334_L	0.896	1.00
136_R	385_N	0.894	1.00
360_W	363_V	0.894	1.00
175_L	179_V	0.894	1.00
248_T	251_M	0.889	1.00
445_A	449_A	0.889	1.00
28_L	174_I	0.886	1.00
347_L	350_M	0.883	1.00
187_I	190_K	0.883	1.00
337_A	341_I	0.881	1.00
336_I	457_F	0.880	1.00
179_V	183_I	0.877	1.00
161_A	165_F	0.876	1.00
446_A	450_L	0.876	1.00
274_L	456_S	0.875	1.00
343_F	446_A	0.875	1.00
419_S	422_A	0.875	1.00
417_V	421_Q	0.873	1.00
336_I	340_C	0.871	1.00
458_T	461_K	0.870	1.00
421_Q	424_H	0.868	1.00
418_M	422_A	0.867	1.00
318_M	321_I	0.867	1.00
200_I	204_S	0.865	1.00
338_G	375_I	0.864	1.00
293_T	361_I	0.864	1.00
306_L	310_P	0.864	1.00
20_L	142_M	0.862	1.00
307_M	362_V	0.861	1.00
108_A	111_I	0.858	1.00
270_L	458_T	0.857	1.00
90_T	94_V	0.856	1.00
313_V	317_F	0.854	1.00
161_A	173_I	0.853	1.00
79_R	191_N	0.853	1.00
160_W	302_F	0.852	1.00
198_T	202_I	0.852	1.00
248_T	252_K	0.849	1.00
315_M	373_A	0.847	1.00
271_T	383_G	0.847	1.00
247_I	251_M	0.844	1.00
345_T	348_P	0.843	1.00
377_M	381_T	0.843	1.00
251_M	261_R	0.842	1.00
128_L	392_I	0.842	1.00
454_L	457_F	0.840	1.00
279_F	403_R	0.836	1.00
58_F	109_R	0.836	1.00
126_V	189_M	0.835	1.00
84_T	87_S	0.835	1.00
96_G	99_A	0.832	1.00
55_T	287_T	0.831	1.00
381_T	385_N	0.829	1.00
97_A	175_L	0.825	1.00
360_W	364_L	0.823	1.00
164_A	302_F	0.821	1.00
28_L	154_G	0.819	1.00
192_V	195_L	0.816	1.00
82_L	185_A	0.816	1.00
265_F	269_S	0.813	1.00
317_F	320_P	0.811	1.00
16_V	139_A	0.809	1.00
198_T	201_D	0.805	1.00
183_I	186_S	0.801	1.00
70_A	393_P	0.800	1.00
81_L	84_T	0.800	1.00
293_T	297_R	0.799	1.00
145_L	148_S	0.797	1.00
29_N	89_F	0.797	1.00
410_G	413_L	0.796	1.00
288_I	415_V	0.795	1.00
96_G	112_Q	0.793	1.00
65_L	69_T	0.793	1.00
415_V	419_S	0.792	1.00
420_N	423_A	0.791	1.00
66_I	400_N	0.791	1.00
457_F	461_K	0.790	1.00
89_F	116_A	0.789	1.00
346_S	350_M	0.787	1.00
416_S	419_S	0.784	1.00
87_S	91_A	0.783	1.00
218_G	221_S	0.782	1.00
145_L	316_G	0.779	1.00
246_F	250_Q	0.777	1.00
362_V	366_T	0.777	1.00
100_P	103_P	0.772	1.00
63_G	401_T	0.768	1.00
422_A	425_A	0.766	1.00
413_L	416_S	0.764	1.00
292_Y	296_V	0.763	1.00
78_S	125_T	0.761	1.00
36_A	171_F	0.759	1.00
89_F	178_A	0.759	1.00
384_I	392_I	0.757	1.00
18_I	184_L	0.755	1.00
326_F	378_P	0.754	1.00
151_P	312_A	0.754	1.00
444_V	447_V	0.753	1.00
150_A	154_G	0.753	1.00
417_V	420_N	0.753	1.00
249_R	252_K	0.751	1.00
29_N	174_I	0.750	1.00
284_G	445_A	0.750	1.00
33_L	54_L	0.748	1.00
293_T	307_M	0.748	1.00
24_F	153_I	0.743	1.00
159_G	301_A	0.742	1.00
199_Q	202_I	0.742	1.00
342_I	345_T	0.742	1.00
76_F	80_A	0.742	1.00
89_F	115_G	0.741	1.00
125_T	393_P	0.738	1.00
18_I	185_A	0.738	1.00
342_I	371_G	0.738	1.00
199_Q	255_K	0.738	1.00
154_G	158_S	0.737	1.00
245_L	248_T	0.736	1.00
277_L	448_I	0.735	1.00
109_R	112_Q	0.734	1.00
156_T	160_W	0.733	1.00
148_S	315_M	0.732	1.00
40_I	105_L	0.732	1.00
52_Q	56_T	0.731	1.00
340_C	343_F	0.730	1.00
53_W	412_A	0.730	1.00
204_S	249_R	0.728	1.00
339_F	375_I	0.727	1.00
336_I	456_S	0.725	1.00
159_G	305_G	0.723	1.00
24_F	146_V	0.721	1.00
126_V	130_I	0.720	1.00
67_P	71_F	0.720	1.00
247_I	260_F	0.716	1.00
344_L	348_P	0.716	1.00
153_I	156_T	0.714	1.00
162_V	170_L	0.713	1.00
94_V	172_Y	0.713	1.00
318_M	322_I	0.711	1.00
397_A	401_T	0.711	1.00
307_M	310_P	0.710	1.00
71_F	394_H	0.710	1.00
366_T	369_L	0.707	1.00
25_V	178_A	0.706	1.00
92_G	95_V	0.706	1.00
341_I	345_T	0.703	1.00
176_P	179_V	0.701	1.00
420_N	425_A	0.700	1.00
267_V	386_A	0.700	1.00
276_T	402_I	0.700	1.00
123_M	143_V	0.698	1.00
194_T	197_K	0.697	1.00
52_Q	288_I	0.696	1.00
169_S	173_I	0.695	1.00
48_A	419_S	0.695	1.00
100_P	108_A	0.694	1.00
125_T	129_T	0.692	1.00
314_V	317_F	0.691	1.00
455_L	459_L	0.691	1.00
243_L	247_I	0.690	1.00
362_V	365_Y	0.690	1.00
148_S	319_S	0.688	1.00
267_V	460_K	0.688	1.00
60_L	63_G	0.686	1.00
374_M	378_P	0.684	1.00
46_V	51_A	0.684	1.00
293_T	299_V	0.682	1.00
38_P	42_R	0.675	1.00
54_L	57_S	0.674	1.00
177_F	180_I	0.673	1.00
267_V	270_L	0.673	1.00
302_F	306_L	0.671	1.00
418_M	421_Q	0.670	1.00
68_I	71_F	0.670	1.00
291_L	295_N	0.669	1.00
124_Q	140_M	0.667	1.00
203_L	206_I	0.667	1.00
25_V	29_N	0.666	1.00
22_G	185_A	0.664	1.00
321_I	325_I	0.664	1.00
49_N	419_S	0.663	1.00
451_V	455_L	0.660	1.00
15_I	18_I	0.655	1.00
350_M	353_T	0.654	1.00
26_A	119_M	0.653	1.00
449_A	453_F	0.653	1.00
275_G	279_F	0.653	1.00
336_I	339_F	0.653	1.00
318_M	373_A	0.652	1.00
14_V	17_G	0.651	1.00
87_S	90_T	0.651	1.00
186_S	190_K	0.650	1.00
98_F	108_A	0.649	1.00
137_G	323_G	0.649	1.00
69_T	85_A	0.648	1.00
265_F	388_P	0.648	1.00
54_L	106_L	0.647	1.00
317_F	321_I	0.646	1.00
273_L	277_L	0.646	1.00
41_M	46_V	0.644	1.00
23_A	147_I	0.643	1.00
159_G	302_F	0.643	1.00
130_I	190_K	0.639	1.00
127_F	139_A	0.638	1.00
30_Q	62_N	0.637	1.00
272_T	276_T	0.636	1.00
444_V	461_K	0.636	1.00
69_T	81_L	0.635	1.00
128_L	384_I	0.635	1.00
256_P	260_F	0.634	1.00
59_M	407_G	0.633	1.00
202_I	205_V	0.632	1.00
140_M	381_T	0.632	1.00
318_M	374_M	0.632	1.00
32_L	158_S	0.631	1.00
442_F	446_A	0.630	1.00
198_T	205_V	0.630	1.00
44_F	167_W	0.629	1.00
107_T	110_I	0.629	1.00
384_I	396_T	0.627	1.00
79_R	190_K	0.626	1.00
273_L	455_L	0.626	1.00
356_T	360_W	0.623	1.00
161_A	170_L	0.622	1.00
456_S	459_L	0.621	1.00
264_T	269_S	0.620	1.00
19_L	123_M	0.616	1.00
13_S	131_F	0.616	1.00
222_V	225_Y	0.615	1.00
50_Q	103_P	0.612	1.00
56_T	412_A	0.612	1.00
456_S	461_K	0.610	1.00
145_L	149_F	0.610	1.00
74_E	77_T	0.607	1.00
137_G	141_G	0.606	1.00
93_T	175_L	0.603	1.00
346_S	368_R	0.603	1.00
63_G	404_Q	0.600	1.00
262_V	265_F	0.600	1.00
191_N	196_R	0.598	1.00
32_L	174_I	0.597	1.00
220_S	223_G	0.597	1.00
405_V	409_I	0.596	1.00
64_I	68_I	0.591	1.00
128_L	140_M	0.590	1.00
448_I	452_G	0.589	1.00
270_L	455_L	0.588	1.00
190_K	193_T	0.586	1.00
53_W	60_L	0.585	1.00
223_G	226_G	0.584	1.00
343_F	449_A	0.584	1.00
160_W	163_E	0.583	1.00
314_V	370_L	0.581	1.00
391_L	394_H	0.580	1.00
217_Y	220_S	0.579	1.00
332_R	460_K	0.579	1.00
337_A	340_C	0.578	1.00
253_L	256_P	0.578	1.00
148_S	316_G	0.577	1.00
62_N	404_Q	0.574	1.00
40_I	44_F	0.574	1.00
272_T	399_N	0.574	1.00
322_I	325_I	0.572	1.00
389_R	392_I	0.570	1.00
27_I	30_Q	0.570	1.00
160_W	306_L	0.570	1.00
259_E	262_V	0.570	1.00
158_S	170_L	0.568	1.00
418_M	423_A	0.568	1.00
453_F	457_F	0.567	1.00
146_V	150_A	0.566	1.00
168_R	172_Y	0.566	1.00
98_F	104_V	0.565	1.00
352_L	360_W	0.564	1.00
69_T	117_G	0.564	1.00
329_V	334_L	0.563	1.00
255_K	259_E	0.562	1.00
131_F	135_K	0.562	1.00
335_A	339_F	0.561	1.00
350_M	439_N	0.560	1.00
344_L	347_L	0.560	1.00
13_S	139_A	0.559	1.00
313_V	316_G	0.558	1.00
53_W	106_L	0.558	1.00
172_Y	175_L	0.558	1.00
180_I	184_L	0.557	1.00
244_L	247_I	0.556	1.00
307_M	358_L	0.556	1.00
351_Q	443_I	0.556	1.00
369_L	373_A	0.555	1.00
310_P	362_V	0.555	1.00
456_S	460_K	0.554	1.00
457_F	460_K	0.553	1.00
135_K	139_A	0.553	1.00
325_I	328_R	0.551	1.00
441_A	445_A	0.550	1.00
334_L	338_G	0.549	1.00
418_M	441_A	0.548	1.00
275_G	403_R	0.546	1.00
17_G	21_A	0.546	1.00
242_A	245_L	0.545	1.00
331_G	461_K	0.543	1.00
86_M	178_A	0.543	1.00
127_F	136_R	0.542	1.00
270_L	460_K	0.542	1.00
310_P	314_V	0.542	1.00
147_I	151_P	0.541	1.00
119_M	185_A	0.541	1.00
414_L	445_A	0.539	1.00
95_V	99_A	0.539	1.00
412_A	416_S	0.539	1.00
122_L	125_T	0.538	1.00
152_A	312_A	0.538	1.00
184_L	187_I	0.538	1.00
118_I	122_L	0.538	1.00
255_K	258_L	0.537	1.00
311_G	365_Y	0.536	1.00
15_I	126_V	0.536	1.00
50_Q	54_L	0.534	1.00
398_M	402_I	0.534	1.00
441_A	444_V	0.532	1.00
225_Y	228_S	0.531	1.00
256_P	261_R	0.530	1.00
451_V	454_L	0.528	1.00
174_I	178_A	0.528	1.00
406_G	409_I	0.528	1.00
53_W	56_T	0.527	1.00
352_L	356_T	0.527	1.00
50_Q	106_L	0.526	1.00
311_G	368_R	0.526	1.00
25_V	177_F	0.525	1.00
37_L	55_T	0.523	1.00
88_I	111_I	0.522	1.00
262_V	395_G	0.520	1.00
142_M	145_L	0.519	1.00
28_L	32_L	0.519	1.00
152_A	313_V	0.517	1.00
329_V	333_G	0.517	1.00
339_F	453_F	0.517	1.00
22_G	181_D	0.516	1.00
20_L	145_L	0.514	1.00
332_R	461_K	0.514	1.00
109_R	113_A	0.513	1.00
73_I	125_T	0.513	1.00
299_V	358_L	0.513	1.00
404_Q	407_G	0.513	1.00
91_A	94_V	0.512	1.00
320_P	323_G	0.512	1.00
364_L	367_V	0.511	1.00
198_T	203_L	0.511	1.00
96_G	109_R	0.510	1.00
30_Q	59_M	0.510	1.00
92_G	99_A	0.510	1.00
63_G	405_V	0.509	1.00
56_T	60_L	0.508	1.00
41_M	47_D	0.507	1.00
455_L	458_T	0.507	1.00
400_N	403_R	0.507	1.00
260_F	264_T	0.507	1.00
222_V	226_G	0.506	1.00
321_I	370_L	0.506	1.00
342_I	346_S	0.504	1.00
106_L	110_I	0.504	1.00
380_T	384_I	0.502	1.00
64_I	67_P	0.502	1.00
138_Q	141_G	0.501	1.00
180_I	183_I	0.501	1.00
330_G	334_L	0.500	1.00

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
1pw4A	1	0.8686	100	0.272	Contact Map
4j05A	3	0.7945	100	0.291	Contact Map
4pypA	1	0.8814	100	0.293	Contact Map
3wdoA	1	0.8411	100	0.317	Contact Map
2gfpA	2	0.7945	100	0.333	Contact Map
3o7qA	1	0.8136	100	0.337	Contact Map
4ldsA	2	0.8686	100	0.337	Contact Map
4gc0A	1	0.9153	100	0.338	Contact Map
4zw9A	1	0.9089	100	0.34	Contact Map
2cfqA	1	0.8453	100	0.36	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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