YCLF - BACSU - GREMLIN Contacts

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YCLF - Uncharacterized transporter YclF

UniProt:	P94408	Sequences: MASIDNESIIKSVPQKGFFGHPRGLFTLFFTEFWERFSYYGMRAILLYYLYTETVNGGLGFDKGTAVAIMSIYGSLVYMSTIIGGWLADRVFGTANTVFYGGIFIMFGHIALAYPGSSIAFYISMVLIIVGTGLLKPNVSSVVGDLYTKEDPRRDSGFSIFYMGINLGGLLAPLIVGTLGQKYNYHLGFGAAAVGMLLGLIVFALTRKKNLGLAGSNVPNPLSKKSAIGTGIGVIIVAIAVIISVQTGVLTIKRFIDLVSILGILIPVIYFIIMFTSKKADKTEKSRLAAYVPLFIGAVMFWAIQEQGATILAVYADERIRLSLGGFELQSSWFQSLNPLFVVIFAPIFAWLWMKLGKRQPSTPVKFSIGIILAGLSFIIMVFPAMQGKEALVSPLWLVLSFLLVVLGELCLSPVGLSVTTKLAPAAFSAQTMSMWFLTNAAAQAINAQVAGLFDKIPETMYFGTIGLISIVLGGILLLLSPVIKRAMKGVL	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	492 (464)
Sequences:	4642 (2919)
Seq/√Len:	135.5

ECOLI - DTPB DTPD DTPA YJDL
BACSU - YCLF

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
179_L	191_A	4.323	1.00
382_V	464_G	3.804	1.00
380_I	404_L	3.675	1.00
334_F	395_P	3.610	1.00
301_F	408_G	3.428	1.00
92_F	97_T	3.365	1.00
87_L	92_F	3.288	1.00
369_I	411_C	3.155	1.00
322_L	328_E	3.038	1.00
107_F	127_L	2.989	1.00
468_L	472_V	2.981	1.00
180_G	332_S	2.844	1.00
87_L	91_V	2.789	1.00
111_A	124_S	2.780	1.00
341_F	403_L	2.742	1.00
48_Y	313_A	2.725	1.00
106_M	197_L	2.678	1.00
111_A	127_L	2.663	1.00
416_G	436_W	2.659	1.00
316_A	398_L	2.632	1.00
38_S	109_H	2.621	1.00
92_F	100_Y	2.568	1.00
278_K	282_K	2.535	1.00
372_I	474_G	2.492	1.00
101_G	134_L	2.484	1.00
32_E	36_R	2.475	1.00
103_I	107_F	2.459	1.00
323_S	328_E	2.439	1.00
399_V	403_L	2.404	1.00
373_L	407_L	2.345	1.00
379_I	467_G	2.236	1.00
181_Q	331_S	2.230	1.00
302_W	413_S	2.211	1.00
32_E	35_E	2.200	1.00
70_M	309_A	2.159	1.00
70_M	310_T	2.152	1.00
380_I	400_L	2.143	1.00
35_E	136_K	2.138	1.00
278_K	283_T	2.135	1.00
362_S	365_V	2.099	1.00
337_L	399_V	2.097	1.00
348_I	352_L	2.065	1.00
256_I	259_V	2.044	1.00
226_S	230_T	2.039	1.00
475_G	479_L	2.030	1.00
99_F	204_A	2.023	1.00
158_F	421_T	2.021	1.00
375_G	471_I	2.016	1.00
112_L	124_S	1.998	1.00
63_K	314_V	1.988	1.00
47_L	51_Y	1.985	1.00
39_Y	74_G	1.979	1.00
113_A	193_A	1.970	1.00
95_A	207_R	1.964	1.00
345_F	407_L	1.950	1.00
81_T	88_A	1.941	1.00
224_K	227_A	1.930	1.00
471_I	475_G	1.912	1.00
252_I	260_S	1.896	1.00
338_N	406_V	1.863	1.00
32_E	136_K	1.861	1.00
279_K	283_T	1.859	1.00
344_I	348_I	1.835	1.00
80_S	83_I	1.826	1.00
80_S	129_I	1.818	1.00
108_G	128_I	1.813	1.00
353_W	357_G	1.792	1.00
458_P	461_M	1.789	1.00
229_G	233_G	1.775	1.00
47_L	314_V	1.766	1.00
119_I	123_I	1.757	1.00
163_M	343_V	1.755	1.00
170_L	343_V	1.746	1.00
105_I	135_L	1.724	1.00
230_T	233_G	1.717	1.00
143_V	157_G	1.714	1.00
214_A	219_P	1.709	1.00
476_I	480_L	1.693	1.00
275_F	288_L	1.655	1.00
330_Q	333_W	1.652	1.00
61_F	69_I	1.632	1.00
207_R	212_G	1.613	1.00
372_I	376_L	1.601	1.00
482_P	485_K	1.595	1.00
110_I	193_A	1.587	1.00
48_Y	331_S	1.570	1.00
474_G	478_L	1.541	1.00
118_S	122_Y	1.531	1.00
108_G	131_G	1.523	1.00
52_T	185_Y	1.520	1.00
140_S	437_F	1.513	1.00
479_L	483_V	1.510	1.00
161_F	165_I	1.508	1.00
50_L	70_M	1.499	1.00
341_F	406_V	1.497	1.00
338_N	342_V	1.485	1.00
377_S	405_V	1.478	1.00
300_M	473_L	1.475	1.00
184_N	187_L	1.473	1.00
258_L	262_L	1.462	1.00
298_A	439_T	1.459	1.00
62_D	65_T	1.457	1.00
194_V	198_L	1.443	1.00
386_M	460_T	1.438	1.00
385_A	388_G	1.434	1.00
277_S	283_T	1.427	1.00
323_S	326_G	1.401	1.00
322_L	331_S	1.385	1.00
51_Y	314_V	1.381	1.00
145_D	421_T	1.374	1.00
375_G	474_G	1.354	1.00
162_Y	409_E	1.353	1.00
166_N	338_N	1.350	1.00
368_S	474_G	1.349	1.00
27_T	206_T	1.343	1.00
465_T	469_I	1.343	1.00
464_G	468_L	1.341	1.00
33_F	164_G	1.340	1.00
41_G	176_V	1.338	1.00
373_L	408_G	1.337	1.00
394_S	397_W	1.337	1.00
124_S	128_I	1.335	1.00
179_L	183_Y	1.335	1.00
100_Y	103_I	1.331	1.00
305_Q	308_G	1.326	1.00
106_M	110_I	1.324	1.00
177_G	332_S	1.323	1.00
303_A	443_A	1.322	1.00
231_G	234_V	1.320	1.00
383_F	387_Q	1.319	1.00
229_G	232_I	1.315	1.00
316_A	395_P	1.313	1.00
342_V	409_E	1.312	1.00
393_V	397_W	1.309	1.00
282_K	286_S	1.307	1.00
279_K	282_K	1.307	1.00
381_M	401_S	1.304	1.00
230_T	234_V	1.303	1.00
187_L	190_G	1.301	1.00
32_E	161_F	1.297	1.00
94_T	145_D	1.292	1.00
47_L	66_A	1.283	1.00
87_L	97_T	1.278	1.00
364_P	481_S	1.270	1.00
365_V	481_S	1.266	1.00
84_G	133_G	1.266	1.00
368_S	478_L	1.262	1.00
465_T	468_L	1.262	1.00
361_P	369_I	1.261	1.00
176_V	179_L	1.260	1.00
68_A	452_G	1.257	1.00
319_R	391_A	1.256	1.00
50_L	121_F	1.255	1.00
352_L	356_L	1.253	1.00
319_R	392_L	1.245	1.00
227_A	230_T	1.242	1.00
375_G	379_I	1.236	1.00
163_M	346_A	1.233	1.00
132_T	135_L	1.232	1.00
214_A	217_N	1.228	1.00
376_L	404_L	1.228	1.00
162_Y	342_V	1.228	1.00
49_Y	115_P	1.222	1.00
155_D	418_S	1.214	1.00
175_I	191_A	1.213	1.00
233_G	236_I	1.211	1.00
36_R	39_Y	1.210	1.00
257_D	260_S	1.206	1.00
222_L	225_K	1.205	1.00
132_T	136_K	1.195	1.00
327_F	333_W	1.194	1.00
106_M	200_L	1.191	1.00
283_T	286_S	1.184	0.99
257_D	261_I	1.184	0.99
413_S	417_L	1.180	0.99
430_A	434_S	1.174	0.99
136_K	437_F	1.169	0.99
218_V	221_P	1.165	0.99
355_K	358_K	1.165	0.99
367_F	412_L	1.157	0.99
169_G	339_P	1.152	0.99
36_R	136_K	1.150	0.99
35_E	40_Y	1.141	0.99
115_P	120_A	1.140	0.99
177_G	333_W	1.135	0.99
49_Y	121_F	1.133	0.99
140_S	161_F	1.130	0.99
34_W	195_G	1.123	0.99
105_I	132_T	1.123	0.99
275_F	282_K	1.121	0.99
85_G	430_A	1.120	0.99
277_S	282_K	1.120	0.99
463_F	466_I	1.119	0.99
77_V	129_I	1.119	0.99
225_K	229_G	1.117	0.99
215_G	218_V	1.116	0.99
419_V	484_I	1.111	0.99
92_F	96_N	1.111	0.99
322_L	330_Q	1.108	0.99
33_F	167_L	1.103	0.99
280_A	283_T	1.102	0.99
223_S	226_S	1.099	0.99
43_R	306_E	1.098	0.99
482_P	486_R	1.084	0.99
61_F	118_S	1.084	0.99
260_S	263_G	1.074	0.99
255_F	259_V	1.074	0.99
147_Y	157_G	1.071	0.99
221_P	225_K	1.068	0.99
162_Y	166_N	1.065	0.99
36_R	40_Y	1.063	0.99
32_E	135_L	1.056	0.99
227_A	231_G	1.051	0.99
165_I	437_F	1.049	0.99
232_I	238_A	1.049	0.99
224_K	228_I	1.044	0.99
233_G	237_V	1.038	0.99
480_L	483_V	1.038	0.99
275_F	279_K	1.036	0.99
312_L	401_S	1.036	0.99
403_L	407_L	1.034	0.99
80_S	133_G	1.034	0.99
320_I	398_L	1.034	0.99
225_K	282_K	1.031	0.99
205_L	208_K	1.025	0.99
48_Y	52_T	1.024	0.98
249_V	252_I	1.024	0.98
303_A	446_I	1.022	0.98
335_Q	339_P	1.022	0.98
274_M	277_S	1.022	0.98
85_G	434_S	1.016	0.98
384_P	397_W	1.014	0.98
78_Y	136_K	1.012	0.98
226_S	233_G	1.011	0.98
461_M	464_G	1.009	0.98
256_I	261_I	1.007	0.98
201_I	205_L	0.999	0.98
376_L	380_I	0.997	0.98
346_A	350_A	0.994	0.98
77_V	80_S	0.990	0.98
144_G	421_T	0.988	0.98
280_A	284_E	0.986	0.98
165_I	417_L	0.984	0.98
143_V	146_L	0.983	0.98
277_S	280_A	0.983	0.98
346_A	414_P	0.978	0.98
223_S	227_A	0.977	0.98
140_S	433_M	0.974	0.98
226_S	229_G	0.974	0.98
52_T	181_Q	0.974	0.98
342_V	347_P	0.972	0.98
370_G	412_L	0.970	0.98
310_T	451_A	0.967	0.98
237_V	240_A	0.965	0.98
178_T	183_Y	0.963	0.98
225_K	228_I	0.961	0.98
329_L	333_W	0.955	0.98
258_L	261_I	0.951	0.98
190_G	194_V	0.949	0.98
472_V	479_L	0.949	0.98
308_G	405_V	0.948	0.98
281_D	284_E	0.947	0.97
43_R	70_M	0.946	0.97
65_T	68_A	0.944	0.97
312_L	402_F	0.944	0.97
413_S	416_G	0.942	0.97
241_V	244_S	0.942	0.97
319_R	459_E	0.940	0.97
301_F	342_V	0.938	0.97
409_E	413_S	0.937	0.97
239_I	242_I	0.937	0.97
316_A	320_I	0.933	0.97
298_A	436_W	0.930	0.97
462_Y	466_I	0.929	0.97
61_F	65_T	0.929	0.97
29_F	164_G	0.929	0.97
106_M	193_A	0.927	0.97
190_G	193_A	0.927	0.97
48_Y	317_D	0.919	0.97
108_G	112_L	0.918	0.97
78_Y	437_F	0.911	0.97
76_L	445_A	0.910	0.97
483_V	487_A	0.908	0.97
249_V	253_K	0.907	0.97
156_S	350_A	0.902	0.97
34_W	139_V	0.901	0.97
255_F	290_A	0.901	0.97
277_S	281_D	0.900	0.97
21_H	25_L	0.899	0.97
456_K	459_E	0.899	0.97
178_T	182_K	0.897	0.97
226_S	239_I	0.896	0.96
174_L	333_W	0.889	0.96
177_G	180_G	0.889	0.96
345_F	348_I	0.888	0.96
51_Y	63_K	0.884	0.96
248_G	251_T	0.884	0.96
36_R	165_I	0.883	0.96
235_I	239_I	0.882	0.96
214_A	218_V	0.879	0.96
315_Y	398_L	0.879	0.96
459_E	462_Y	0.878	0.96
228_I	232_I	0.872	0.96
99_F	102_G	0.869	0.96
171_L	174_L	0.869	0.96
418_S	422_K	0.866	0.96
345_F	403_L	0.866	0.96
232_I	237_V	0.864	0.96
413_S	436_W	0.860	0.96
306_E	440_N	0.859	0.96
32_E	165_I	0.858	0.96
321_R	392_L	0.853	0.95
348_I	353_W	0.850	0.95
308_G	409_E	0.849	0.95
373_L	404_L	0.849	0.95
306_E	444_Q	0.848	0.95
257_D	262_L	0.847	0.95
107_F	111_A	0.847	0.95
52_T	58_G	0.846	0.95
294_L	367_F	0.846	0.95
68_A	448_A	0.842	0.95
159_S	353_W	0.842	0.95
382_V	386_M	0.841	0.95
69_I	122_Y	0.841	0.95
305_Q	406_V	0.841	0.95
140_S	417_L	0.840	0.95
203_F	207_R	0.839	0.95
221_P	230_T	0.839	0.95
67_V	310_T	0.836	0.95
252_I	263_G	0.832	0.95
368_S	481_S	0.832	0.95
71_S	447_N	0.832	0.95
45_I	50_L	0.828	0.95
380_I	401_S	0.828	0.95
305_Q	413_S	0.826	0.94
230_T	237_V	0.822	0.94
34_W	37_F	0.821	0.94
317_D	331_S	0.820	0.94
232_I	239_I	0.819	0.94
135_L	139_V	0.816	0.94
161_F	409_E	0.816	0.94
341_F	399_V	0.815	0.94
345_F	410_L	0.815	0.94
166_N	409_E	0.813	0.94
173_P	336_S	0.810	0.94
82_I	434_S	0.809	0.94
476_I	479_L	0.808	0.94
158_F	294_L	0.807	0.94
251_T	254_R	0.805	0.94
52_T	317_D	0.804	0.94
349_F	407_L	0.804	0.94
367_F	416_G	0.803	0.94
170_L	340_L	0.802	0.94
231_G	235_I	0.802	0.94
19_F	22_P	0.801	0.94
160_I	163_M	0.798	0.93
237_V	244_S	0.798	0.93
254_R	259_V	0.797	0.93
113_A	190_G	0.796	0.93
89_D	93_G	0.796	0.93
483_V	486_R	0.795	0.93
230_T	240_A	0.793	0.93
33_F	165_I	0.792	0.93
62_D	66_A	0.791	0.93
443_A	446_I	0.790	0.93
233_G	239_I	0.789	0.93
253_K	256_I	0.789	0.93
161_F	417_L	0.788	0.93
370_G	408_G	0.786	0.93
349_F	352_L	0.784	0.93
449_Q	453_L	0.783	0.93
329_L	395_P	0.783	0.93
220_N	223_S	0.781	0.93
21_H	24_G	0.780	0.93
145_D	429_S	0.780	0.93
216_S	219_P	0.777	0.93
338_N	409_E	0.777	0.93
268_V	271_F	0.777	0.93
236_I	241_V	0.777	0.93
218_V	226_S	0.775	0.92
235_I	238_A	0.771	0.92
233_G	242_I	0.769	0.92
259_V	263_G	0.765	0.92
295_F	420_T	0.761	0.92
252_I	255_F	0.760	0.92
384_P	393_V	0.758	0.92
35_E	39_Y	0.756	0.91
90_R	220_N	0.755	0.91
454_F	465_T	0.752	0.91
84_G	147_Y	0.750	0.91
381_M	384_P	0.750	0.91
77_V	138_N	0.747	0.91
161_F	424_A	0.746	0.91
446_I	449_Q	0.744	0.91
246_Q	249_V	0.744	0.91
51_Y	317_D	0.743	0.91
137_P	141_S	0.743	0.91
22_P	25_L	0.741	0.91
236_I	240_A	0.739	0.91
67_V	314_V	0.737	0.90
256_I	260_S	0.736	0.90
183_Y	330_Q	0.736	0.90
139_V	165_I	0.734	0.90
319_R	390_E	0.732	0.90
230_T	239_I	0.732	0.90
35_E	196_M	0.732	0.90
382_V	460_T	0.732	0.90
467_G	471_I	0.728	0.90
228_I	231_G	0.727	0.90
186_H	190_G	0.727	0.90
45_I	188_G	0.726	0.90
472_V	476_I	0.725	0.90
349_F	353_W	0.724	0.90
297_G	477_L	0.724	0.90
239_I	244_S	0.723	0.90
181_Q	332_S	0.720	0.89
461_M	468_L	0.719	0.89
255_F	260_S	0.719	0.89
254_R	257_D	0.718	0.89
38_S	132_T	0.718	0.89
304_I	374_A	0.717	0.89
304_I	470_S	0.717	0.89
277_S	284_E	0.717	0.89
236_I	243_I	0.715	0.89
232_I	236_I	0.712	0.89
75_S	445_A	0.710	0.89
76_L	129_I	0.709	0.89
148_T	211_L	0.708	0.89
102_G	196_M	0.707	0.88
35_E	307_Q	0.705	0.88
365_V	368_S	0.705	0.88
305_Q	338_N	0.703	0.88
36_R	132_T	0.701	0.88
315_Y	320_I	0.700	0.88
353_W	361_P	0.700	0.88
113_A	200_L	0.699	0.88
98_V	203_F	0.698	0.88
110_I	114_Y	0.698	0.88
233_G	240_A	0.697	0.88
175_I	179_L	0.697	0.88
166_N	339_P	0.697	0.88
232_I	235_I	0.696	0.88
294_L	419_V	0.696	0.88
301_F	412_L	0.693	0.87
47_L	67_V	0.691	0.87
226_S	232_I	0.691	0.87
175_I	178_T	0.691	0.87
144_G	158_F	0.689	0.87
230_T	235_I	0.689	0.87
97_T	134_L	0.688	0.87
27_T	209_K	0.688	0.87
252_I	257_D	0.688	0.87
278_K	281_D	0.686	0.87
237_V	241_V	0.684	0.87
256_I	262_L	0.683	0.87
225_K	233_G	0.681	0.87
322_L	395_P	0.680	0.87
140_S	165_I	0.679	0.86
39_Y	136_K	0.678	0.86
275_F	278_K	0.678	0.86
470_S	474_G	0.677	0.86
225_K	230_T	0.675	0.86
229_G	235_I	0.674	0.86
391_A	394_S	0.673	0.86
166_N	169_G	0.672	0.86
109_H	196_M	0.670	0.86
311_I	463_F	0.668	0.86
78_Y	166_N	0.667	0.85
376_L	379_I	0.665	0.85
36_R	41_G	0.664	0.85
194_V	224_K	0.664	0.85
368_S	477_L	0.664	0.85
47_L	313_A	0.662	0.85
99_F	200_L	0.661	0.85
96_N	100_Y	0.660	0.85
138_N	430_A	0.659	0.85
259_V	262_L	0.658	0.85
308_G	402_F	0.656	0.84
300_M	408_G	0.655	0.84
355_K	359_R	0.655	0.84
291_Y	420_T	0.653	0.84
181_Q	317_D	0.652	0.84
273_I	276_T	0.652	0.84
29_F	33_F	0.651	0.84
140_S	413_S	0.648	0.84
229_G	453_L	0.648	0.84
304_I	405_V	0.647	0.84
383_F	386_M	0.647	0.84
224_K	232_I	0.646	0.84
426_A	429_S	0.646	0.84
79_M	444_Q	0.645	0.83
299_V	443_A	0.645	0.83
86_W	91_V	0.643	0.83
255_F	258_L	0.643	0.83
382_V	385_A	0.640	0.83
254_R	260_S	0.639	0.83
82_I	86_W	0.639	0.83
216_S	220_N	0.637	0.83
388_G	393_V	0.636	0.83
382_V	466_I	0.636	0.83
337_L	341_F	0.635	0.83
213_L	343_V	0.634	0.82
180_G	184_N	0.633	0.82
268_V	272_I	0.633	0.82
49_Y	350_A	0.632	0.82
67_V	454_F	0.631	0.82
50_L	59_L	0.630	0.82
320_I	395_P	0.630	0.82
232_I	241_V	0.628	0.82
226_S	262_L	0.628	0.82
104_F	130_V	0.626	0.82
248_G	426_A	0.626	0.82
412_L	436_W	0.625	0.82
229_G	239_I	0.624	0.81
105_I	128_I	0.620	0.81
70_M	444_Q	0.620	0.81
275_F	280_A	0.619	0.81
68_A	72_I	0.619	0.81
166_N	413_S	0.619	0.81
329_L	403_L	0.617	0.81
185_Y	189_F	0.617	0.81
373_L	411_C	0.616	0.81
35_E	41_G	0.616	0.81
109_H	193_A	0.616	0.81
173_P	177_G	0.612	0.80
74_G	77_V	0.612	0.80
135_L	161_F	0.611	0.80
141_S	433_M	0.611	0.80
224_K	231_G	0.610	0.80
88_A	93_G	0.610	0.80
138_N	192_A	0.609	0.80
170_L	339_P	0.609	0.80
135_L	140_S	0.609	0.80
238_A	252_I	0.608	0.80
312_L	316_A	0.608	0.80
224_K	230_T	0.604	0.79
26_F	30_F	0.602	0.79
158_F	424_A	0.601	0.79
461_M	465_T	0.601	0.79
364_P	486_R	0.599	0.79
301_F	338_N	0.597	0.79
139_V	142_V	0.596	0.78
17_G	23_R	0.594	0.78
372_I	475_G	0.594	0.78
32_E	41_G	0.593	0.78
206_T	209_K	0.592	0.78
269_I	272_I	0.592	0.78
99_F	103_I	0.589	0.78
218_V	223_S	0.589	0.78
385_A	460_T	0.587	0.77
157_G	421_T	0.587	0.77
368_S	372_I	0.587	0.77
220_N	226_S	0.587	0.77
250_L	254_R	0.586	0.77
349_F	410_L	0.586	0.77
206_T	210_N	0.586	0.77
135_L	138_N	0.585	0.77
78_Y	338_N	0.584	0.77
202_V	210_N	0.584	0.77
218_V	222_L	0.584	0.77
354_M	357_G	0.583	0.77
226_S	258_L	0.582	0.77
307_Q	311_I	0.582	0.77
236_I	264_I	0.582	0.77
225_K	232_I	0.581	0.77
16_K	23_R	0.580	0.77
180_G	185_Y	0.580	0.77
162_Y	338_N	0.578	0.76
37_F	195_G	0.574	0.76
308_G	338_N	0.573	0.76
44_A	173_P	0.572	0.76
35_E	135_L	0.570	0.75
159_S	350_A	0.570	0.75
384_P	401_S	0.569	0.75
387_Q	393_V	0.569	0.75
45_I	63_K	0.569	0.75
187_L	192_A	0.569	0.75
198_L	202_V	0.568	0.75
162_Y	165_I	0.566	0.75
427_A	434_S	0.566	0.75
105_I	131_G	0.566	0.75
358_K	472_V	0.566	0.75
40_Y	140_S	0.565	0.75
379_I	383_F	0.563	0.74
307_Q	378_F	0.563	0.74
100_Y	204_A	0.562	0.74
274_M	278_K	0.562	0.74
423_L	484_I	0.561	0.74
108_G	124_S	0.561	0.74
71_S	448_A	0.560	0.74
32_E	39_Y	0.560	0.74
407_L	468_L	0.558	0.74
38_S	42_M	0.558	0.74
111_A	120_A	0.557	0.74
465_T	472_V	0.557	0.74
48_Y	51_Y	0.557	0.74
44_A	172_A	0.557	0.74
309_A	313_A	0.555	0.73
231_G	244_S	0.554	0.73
315_Y	393_V	0.554	0.73
293_P	484_I	0.552	0.73
291_Y	298_A	0.552	0.73
357_G	360_Q	0.551	0.73
389_K	392_L	0.551	0.73
109_H	113_A	0.551	0.73
275_F	289_A	0.549	0.73
32_E	40_Y	0.549	0.73
149_K	154_R	0.549	0.73
417_L	433_M	0.549	0.73
31_T	135_L	0.548	0.72
79_M	443_A	0.547	0.72
304_I	466_I	0.545	0.72
254_R	258_L	0.544	0.72
229_G	241_V	0.544	0.72
290_A	487_A	0.544	0.72
224_K	234_V	0.544	0.72
181_Q	322_L	0.543	0.72
38_S	186_H	0.542	0.72
174_L	336_S	0.541	0.71
50_L	159_S	0.541	0.71
302_W	409_E	0.540	0.71
273_I	277_S	0.538	0.71
464_G	470_S	0.537	0.71
223_S	285_K	0.536	0.71
102_G	138_N	0.535	0.71
15_Q	19_F	0.535	0.71
163_M	167_L	0.535	0.71
36_R	161_F	0.535	0.71
253_K	260_S	0.534	0.71
477_L	481_S	0.534	0.71
224_K	235_I	0.532	0.70
354_M	360_Q	0.532	0.70
73_Y	77_V	0.531	0.70
286_S	289_A	0.530	0.70
162_Y	408_G	0.530	0.70
24_G	27_T	0.530	0.70
34_W	38_S	0.528	0.70
254_R	262_L	0.526	0.69
216_S	222_L	0.526	0.69
155_D	366_K	0.526	0.69
338_N	405_V	0.525	0.69
225_K	241_V	0.525	0.69
217_N	221_P	0.525	0.69
27_T	202_V	0.524	0.69
220_N	224_K	0.524	0.69
303_A	450_V	0.523	0.69
309_A	405_V	0.523	0.69
66_A	317_D	0.521	0.69
315_Y	381_M	0.520	0.69
61_F	122_Y	0.520	0.69
91_V	112_L	0.520	0.69
165_I	413_S	0.520	0.69
204_A	207_R	0.519	0.68
305_Q	309_A	0.518	0.68
413_S	433_M	0.518	0.68
256_I	263_G	0.518	0.68
322_L	334_F	0.518	0.68
374_A	377_S	0.517	0.68
342_V	346_A	0.516	0.68
373_L	376_L	0.515	0.68
172_A	334_F	0.514	0.68
78_Y	165_I	0.514	0.68
420_T	432_T	0.513	0.67
253_K	262_L	0.512	0.67
258_L	480_L	0.512	0.67
374_A	470_S	0.511	0.67
180_G	187_L	0.511	0.67
136_K	161_F	0.510	0.67
364_P	423_L	0.510	0.67
302_W	305_Q	0.509	0.67
68_A	71_S	0.509	0.67
417_L	437_F	0.508	0.67
106_M	163_M	0.508	0.67
238_A	264_I	0.508	0.67
74_G	379_I	0.507	0.67
208_K	211_L	0.507	0.67
365_V	485_K	0.507	0.67
156_S	159_S	0.507	0.67
40_Y	166_N	0.506	0.66
162_Y	335_Q	0.506	0.66
237_V	242_I	0.505	0.66
143_V	158_F	0.504	0.66
216_S	223_S	0.504	0.66
409_E	416_G	0.504	0.66
23_R	209_K	0.503	0.66
370_G	374_A	0.503	0.66
429_S	432_T	0.503	0.66
136_K	165_I	0.503	0.66
136_K	196_M	0.502	0.66
252_I	262_L	0.502	0.66
31_T	164_G	0.501	0.66
69_I	126_V	0.501	0.66
300_M	303_A	0.501	0.66
372_I	478_L	0.501	0.66
108_G	158_F	0.500	0.66
225_K	234_V	0.500	0.66

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4oh3A	2	0.9329	100	0.5	Contact Map
4uvmA	1	0.9411	100	0.537	Contact Map
4ikvA	1	0.9797	100	0.567	Contact Map
4q65A	1	0.8659	100	0.571	Contact Map
4tphA	2	0.8659	100	0.596	Contact Map
4xnjA	1	0.937	100	0.599	Contact Map
4w6vA	1	0.937	100	0.697	Contact Map
1pw4A	1	0.8476	100	0.731	Contact Map
3wdoA	1	0.8069	100	0.736	Contact Map
2cfqA	1	0.8232	100	0.74	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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