GREMLIN Database
CYDD - ATP-binding/permease protein CydD
UniProt: P94367 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 575 (556)
Sequences: 52497 (37155)
Seq/√Len: 1575.7

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
452_H462_Y4.5861.00
364_E539_K4.4101.00
338_A359_T4.3951.00
341_D355_N4.3521.00
361_R364_E4.3441.00
424_T428_N4.0541.00
539_K551_E4.0071.00
554_H564_Y3.9371.00
340_R393_S3.9201.00
427_L439_D3.8901.00
447_K452_H3.8311.00
340_R395_T3.4711.00
452_H456_E3.4531.00
336_T359_T3.4291.00
393_S400_E3.3591.00
354_H547_K3.1051.00
339_F342_V3.0761.00
427_L463_H3.0741.00
427_L431_R3.0261.00
438_S441_D2.9941.00
561_N565_R2.9671.00
439_D443_R2.8841.00
380_L527_I2.8731.00
446_A462_Y2.8551.00
351_Q354_H2.8421.00
343_T355_N2.7751.00
380_L495_I2.7481.00
411_A492_P2.6341.00
338_A395_T2.5571.00
550_M560_A2.5451.00
444_R448_Q2.5061.00
430_I446_A2.4641.00
336_T361_R2.4261.00
443_R452_H2.4231.00
360_L366_M2.4041.00
490_D522_K2.3961.00
385_G388_K2.3951.00
345_S351_Q2.3701.00
413_A491_T2.3641.00
541_V551_E2.3541.00
553_T556_E2.3281.00
150_I154_F2.3091.00
44_S275_T2.3081.00
550_M562_E2.2911.00
427_L442_V2.2761.00
550_M561_N2.2581.00
343_T351_Q2.2461.00
343_T391_S2.2041.00
358_F541_V2.1861.00
434_N441_D2.1841.00
365_K537_A2.1841.00
443_R447_K2.1351.00
336_T362_Q2.1221.00
460_D464_T2.1171.00
544_E563_R2.0781.00
451_L454_Y2.0681.00
339_F358_F2.0511.00
430_I442_V2.0501.00
516_F536_A2.0241.00
44_S273_A2.0121.00
508_E530_H1.9841.00
360_L525_L1.9781.00
388_K402_A1.9551.00
312_N316_P1.9411.00
441_D490_D1.9391.00
14_N91_D1.9371.00
341_D357_S1.9261.00
345_S390_D1.9221.00
335_V397_N1.9201.00
99_M319_E1.9081.00
443_R456_E1.8991.00
10_Y95_R1.8951.00
552_G556_E1.8891.00
12_K15_A1.8861.00
192_G229_D1.8571.00
156_S266_Q1.8371.00
57_Y61_V1.8261.00
366_M539_K1.8121.00
431_R442_V1.8101.00
431_R439_D1.7881.00
366_M541_V1.7651.00
509_R513_E1.7631.00
444_R447_K1.7521.00
445_A449_V1.7431.00
379_S543_L1.7231.00
549_E563_R1.7211.00
541_V548_T1.7061.00
439_D463_H1.6961.00
503_L511_L1.6791.00
367_A537_A1.6751.00
450_K510_E1.6621.00
215_R218_A1.6541.00
337_L525_L1.6391.00
544_E549_E1.6361.00
364_E538_D1.6301.00
448_Q517_E1.6261.00
467_Q472_R1.6211.00
365_K526_W1.6201.00
123_D310_R1.6191.00
446_A455_I1.6061.00
558_L568_Y1.6051.00
61_V65_T1.6041.00
430_I488_L1.5991.00
334_D397_N1.5951.00
437_A488_L1.5831.00
400_E403_L1.5801.00
466_V473_F1.5681.00
187_A309_R1.5591.00
368_L541_V1.5421.00
550_M565_R1.5401.00
336_T397_N1.5311.00
453_D456_E1.5281.00
368_L379_S1.5251.00
443_R462_Y1.5251.00
353_L356_F1.5091.00
441_D444_R1.5081.00
556_E560_A1.5071.00
102_P319_E1.4961.00
535_E555_E1.4911.00
528_T533_G1.4751.00
40_G279_A1.4621.00
361_R539_K1.4421.00
440_E443_R1.4361.00
99_M103_G1.4341.00
195_V229_D1.4321.00
344_F378_T1.4211.00
460_D465_S1.4191.00
446_A452_H1.4161.00
58_V62_A1.4121.00
384_E414_V1.4101.00
199_R226_E1.4081.00
261_F265_G1.4051.00
382_L394_V1.4051.00
431_R437_A1.3981.00
153_G160_A1.3941.00
265_G269_D1.3841.00
371_R544_E1.3771.00
342_V389_P1.3701.00
439_D442_V1.3661.00
563_R566_R1.3621.00
339_F383_I1.3551.00
36_M283_V1.3491.00
454_Y477_E1.3491.00
513_E517_E1.3481.00
355_N547_K1.3471.00
441_D488_L1.3451.00
180_L183_R1.3411.00
333_Q397_N1.3411.00
555_E559_A1.3381.00
219_F432_L1.3371.00
344_F382_L1.3321.00
517_E520_K1.3271.00
413_A486_I1.3141.00
172_V176_V1.3121.00
423_D465_S1.3091.00
344_F387_L1.3061.00
153_G157_W1.2901.00
371_R563_R1.2901.00
367_A534_V1.2831.00
458_L464_T1.2781.00
335_V362_Q1.2771.00
188_K233_L1.2731.00
192_G233_L1.2611.00
426_I481_I1.2541.00
192_G195_V1.2541.00
13_Q91_D1.2531.00
24_L73_S1.2341.00
440_E444_R1.2321.00
454_Y458_L1.2301.00
434_N437_A1.2231.00
372_S507_T1.2221.00
340_R357_S1.2191.00
343_T354_H1.2171.00
467_Q470_G1.2161.00
99_M315_A1.2121.00
446_A451_L1.2101.00
389_P401_T1.2091.00
519_L524_I1.2051.00
448_Q487_L1.2051.00
399_V403_L1.2041.00
383_I525_L1.2031.00
266_Q271_E1.2001.00
159_F280_F1.1921.00
211_M216_R1.1801.00
366_M525_L1.1781.00
336_T398_G1.1771.00
457_S477_E1.1761.00
203_A219_F1.1741.00
33_A147_V1.1721.00
479_Q501_V1.1711.00
451_L455_I1.1691.00
273_A276_M1.1631.00
362_Q492_P1.1581.00
445_A487_L1.1551.00
358_F379_S1.1521.00
221_D225_K1.1511.00
356_F379_S1.1451.00
54_L58_V1.1451.00
152_L280_F1.1451.00
206_G420_H1.1421.00
443_R446_A1.1411.00
109_S387_L1.1411.00
217_H221_D1.1401.00
473_F481_I1.1351.00
94_V98_N1.1341.00
438_S488_L1.1331.00
540_I554_H1.1331.00
228_R232_E1.1271.00
450_K507_T1.1171.00
40_G44_S1.1151.00
334_D362_Q1.1141.00
399_V404_L1.1121.00
96_L314_V1.1071.00
456_E461_G1.1051.00
351_Q390_D1.0981.00
339_F394_V1.0931.00
111_F115_D1.0881.00
115_D194_N1.0861.00
341_D391_S1.0841.00
112_R115_D1.0821.00
360_L523_T1.0751.00
415_L486_I1.0691.00
365_K524_I1.0681.00
554_H558_L1.0671.00
98_N102_P1.0601.00
99_M102_P1.0591.00
195_V226_E1.0581.00
27_V73_S1.0571.00
528_T534_V1.0571.00
308_I312_N1.0561.00
453_D457_S1.0541.00
449_V484_A1.0521.00
339_F379_S1.0471.00
37_F41_F1.0461.00
486_I494_I1.0391.00
83_H87_K1.0381.00
324_E327_D1.0361.00
109_S381_A1.0301.00
157_W161_I1.0281.00
262_W266_Q1.0271.00
419_P482_A1.0251.00
161_I165_L1.0241.00
337_L383_I1.0221.00
526_W537_A1.0221.00
219_F222_A1.0201.00
382_L389_P1.0181.00
225_K229_D1.0111.00
346_Y352_V1.0111.00
542_F563_R1.0111.00
450_K513_E1.0101.00
158_P271_E1.0091.00
263_T277_I1.0091.00
428_N431_R1.0091.00
407_Q410_D1.0091.00
166_Y255_L1.0081.00
91_D95_R1.0061.00
236_K239_R1.0061.00
492_P522_K1.0041.00
223_Y227_E1.0011.00
231_F235_R1.0001.00
450_K514_T0.9991.00
498_E529_H0.9971.00
17_L83_H0.9961.00
38_T59_P0.9961.00
364_E551_E0.9911.00
126_H307_S0.9901.00
494_I522_K0.9901.00
21_V81_G0.9891.00
396_L408_I0.9881.00
455_I462_Y0.9881.00
394_V401_T0.9871.00
199_R222_A0.9871.00
338_A398_G0.9831.00
475_G480_R0.9821.00
176_V180_L0.9761.00
15_A19_V0.9741.00
41_F45_K0.9731.00
351_Q391_S0.9721.00
24_L76_V0.9711.00
215_R219_F0.9701.00
442_V462_Y0.9701.00
40_G276_M0.9691.00
324_E403_L0.9681.00
372_S480_R0.9681.00
19_V23_F0.9671.00
444_R490_D0.9641.00
437_A441_D0.9631.00
210_W219_F0.9611.00
184_A236_K0.9601.00
377_S381_A0.9591.00
460_D463_H0.9581.00
450_K517_E0.9561.00
146_A150_I0.9561.00
342_V382_L0.9551.00
187_A191_S0.9491.00
367_A528_T0.9471.00
510_E513_E0.9461.00
445_A488_L0.9421.00
222_A226_E0.9411.00
345_S352_V0.9351.00
104_A320_A0.9331.00
218_A222_A0.9321.00
466_V472_R0.9321.00
188_K192_G0.9311.00
58_V61_V0.9251.00
459_P464_T0.9231.00
427_L462_Y0.9201.00
543_L548_T0.9191.00
404_L408_I0.9171.00
24_L80_V0.9161.00
355_N391_S0.9151.00
90_S94_V0.9141.00
448_Q518_V0.9131.00
224_E228_R0.9121.00
427_L443_R0.9121.00
374_S543_L0.9101.00
506_I510_E0.9091.00
442_V488_L0.9071.00
396_L493_I0.9051.00
483_L496_L0.9031.00
228_R231_F0.9021.00
530_H533_G0.9011.00
447_K456_E0.8971.00
107_L111_F0.8961.00
267_Q272_L0.8941.00
229_D233_L0.8931.00
95_R99_M0.8921.00
119_I313_N0.8921.00
338_A357_S0.8901.00
384_E495_I0.8901.00
123_D307_S0.8881.00
305_Q309_R0.8871.00
264_A268_A0.8861.00
456_E462_Y0.8861.00
65_T69_A0.8851.00
337_L396_L0.8841.00
500_T511_L0.8841.00
415_L483_L0.8841.00
556_E559_A0.8831.00
389_P402_A0.8821.00
96_L120_L0.8821.00
407_Q411_A0.8821.00
155_F276_M0.8811.00
188_K236_K0.8811.00
367_A540_I0.8791.00
393_S402_A0.8781.00
16_R20_L0.8771.00
321_S388_K0.8721.00
365_K516_F0.8681.00
218_A221_D0.8681.00
384_E412_V0.8671.00
162_L262_W0.8671.00
14_N87_K0.8611.00
389_P394_V0.8581.00
365_K519_L0.8571.00
340_R359_T0.8541.00
189_L234_E0.8511.00
421_L481_I0.8511.00
548_T551_E0.8501.00
451_L457_S0.8491.00
467_Q471_I0.8461.00
208_S381_A0.8451.00
106_M320_A0.8431.00
152_L160_A0.8421.00
332_L397_N0.8421.00
422_F429_N0.8381.00
347_D350_S0.8361.00
401_T408_I0.8361.00
406_D410_D0.8341.00
222_A225_K0.8341.00
180_L184_A0.8301.00
466_V470_G0.8301.00
345_S348_N0.8301.00
562_E565_R0.8291.00
330_L404_L0.8291.00
430_I481_I0.8281.00
220_I224_E0.8271.00
421_L478_R0.8241.00
448_Q452_H0.8231.00
362_Q397_N0.8231.00
104_A321_S0.8221.00
175_P179_L0.8221.00
221_D224_E0.8211.00
395_T398_G0.8201.00
345_S349_S0.8191.00
449_V480_R0.8191.00
494_I519_L0.8171.00
31_S69_A0.8171.00
154_F157_W0.8171.00
173_L247_A0.8151.00
149_V160_A0.8141.00
151_A155_F0.8131.00
21_V84_I0.8121.00
356_F548_T0.8121.00
491_T522_K0.8111.00
31_S73_S0.8111.00
217_H220_I0.8091.00
158_P266_Q0.8091.00
103_G317_Q0.8081.00
544_E547_K0.8071.00
180_L240_F0.8071.00
430_I462_Y0.8051.00
425_S428_N0.8051.00
106_M110_R0.8041.00
209_D213_S0.8021.00
226_E229_D0.8021.00
328_Q399_V0.8001.00
99_M318_P0.7921.00
311_M315_A0.7901.00
451_L481_I0.7901.00
55_L58_V0.7891.00
171_V175_P0.7871.00
343_T390_D0.7861.00
512_M533_G0.7821.00
412_V493_I0.7791.00
431_R436_E0.7791.00
96_L311_M0.7771.00
235_R239_R0.7771.00
41_F59_P0.7761.00
508_E512_M0.7761.00
330_L333_Q0.7761.00
494_I524_I0.7741.00
233_L236_K0.7731.00
115_D119_I0.7721.00
410_D489_Q0.7711.00
60_I64_R0.7711.00
72_V76_V0.7711.00
558_L565_R0.7681.00
275_T279_A0.7681.00
512_M528_T0.7671.00
25_G140_S0.7631.00
267_Q277_I0.7621.00
404_L407_Q0.7611.00
116_M314_V0.7611.00
229_D232_E0.7591.00
418_K478_R0.7581.00
561_N566_R0.7571.00
328_Q403_L0.7571.00
335_V523_T0.7571.00
31_S66_F0.7551.00
41_F44_S0.7541.00
458_L473_F0.7541.00
37_F40_G0.7531.00
156_S160_A0.7531.00
130_A304_Y0.7531.00
207_V211_M0.7531.00
151_A154_F0.7521.00
206_G209_D0.7511.00
30_F34_F0.7511.00
126_H303_G0.7511.00
337_L493_I0.7501.00
332_L492_P0.7501.00
100_L108_R0.7501.00
37_F151_A0.7481.00
369_L542_F0.7471.00
179_L183_R0.7451.00
266_Q269_D0.7431.00
184_A233_L0.7421.00
326_G330_L0.7411.00
61_V64_R0.7401.00
554_H568_Y0.7401.00
192_G226_E0.7391.00
44_S47_A0.7381.00
45_K55_L0.7381.00
454_Y457_S0.7371.00
318_P322_Q0.7361.00
153_G164_A0.7351.00
232_E236_K0.7351.00
147_V150_I0.7331.00
141_A293_P0.7331.00
330_L407_Q0.7311.00
17_L87_K0.7301.00
130_A301_V0.7301.00
75_Y79_L0.7301.00
372_S498_E0.7281.00
38_T66_F0.7281.00
62_A65_T0.7261.00
155_F279_A0.7251.00
475_G502_G0.7241.00
345_S350_S0.7241.00
354_H545_N0.7231.00
38_T62_A0.7231.00
43_I278_A0.7231.00
480_R507_T0.7221.00
196_L230_W0.7201.00
165_L168_F0.7191.00
389_P393_S0.7191.00
479_Q502_G0.7151.00
138_A142_L0.7141.00
321_S385_G0.7141.00
119_I123_D0.7131.00
250_C254_G0.7121.00
9_P95_R0.7121.00
363_G523_T0.7051.00
500_T508_E0.7051.00
350_S354_H0.7031.00
142_L146_A0.7031.00
17_L80_V0.7021.00
95_R98_N0.7021.00
434_N489_Q0.7011.00
450_K453_D0.7011.00
158_P161_I0.7001.00
309_R313_N0.6991.00
29_I143_L0.6981.00
14_N17_L0.6971.00
59_P62_A0.6971.00
23_F27_V0.6961.00
446_A449_V0.6961.00
9_P12_K0.6951.00
188_K191_S0.6941.00
69_A73_S0.6931.00
408_I412_V0.6931.00
508_E533_G0.6921.00
395_T400_E0.6911.00
426_I455_I0.6871.00
381_A387_L0.6861.00
190_K193_R0.6861.00
365_K536_A0.6861.00
366_M551_E0.6851.00
327_D330_L0.6851.00
156_S272_L0.6821.00
45_K48_T0.6811.00
555_E558_L0.6811.00
539_K553_T0.6801.00
12_K16_R0.6801.00
160_A280_F0.6791.00
423_D467_Q0.6791.00
560_A563_R0.6781.00
329_I407_Q0.6771.00
329_I405_K0.6771.00
20_L80_V0.6771.00
148_S286_P0.6751.00
103_G319_E0.6751.00
451_L462_Y0.6751.00
434_N490_D0.6731.00
360_L364_E0.6721.00
550_M563_R0.6711.00
439_D462_Y0.6711.00
511_L514_T0.6701.00
172_V175_P0.6691.00
178_S182_T0.6681.00
304_Y307_S0.6671.00
448_Q514_T0.6651.00
98_N220_I0.6651.00
396_L401_T0.6641.00
346_Y378_T0.6631.00
184_A188_K0.6631.00
27_V69_A0.6631.00
431_R434_N0.6621.00
159_F266_Q0.6621.00
380_L525_L0.6621.00
37_F155_F0.6621.00
55_L59_P0.6601.00
28_T74_R0.6581.00
382_L387_L0.6581.00
353_L543_L0.6571.00
118_G197_Y0.6571.00
443_R455_I0.6541.00
150_I153_G0.6541.00
148_S287_L0.6531.00
92_M124_I0.6511.00
89_V93_R0.6511.00
163_L284_V0.6491.00
327_D407_Q0.6481.00
421_L466_V0.6481.00
363_G521_G0.6471.00
483_L487_L0.6451.00
105_L109_S0.6451.00
123_D190_K0.6451.00
89_V128_Q0.6451.00
368_L525_L0.6431.00
441_D445_A0.6431.00
445_A484_A0.6421.00
334_D523_T0.6421.00
96_L315_A0.6421.00
112_R198_S0.6411.00
495_I525_L0.6401.00
33_A36_M0.6401.00
44_S48_T0.6391.00
439_D446_A0.6391.00
339_F356_F0.6371.00
95_R315_A0.6361.00
344_F352_V0.6361.00
127_L308_I0.6361.00
483_L511_L0.6351.00
474_S477_E0.6351.00
461_G464_T0.6341.00
550_M558_L0.6331.00
238_Q242_R0.6321.00
539_K556_E0.6321.00
183_R188_K0.6311.00
140_S144_L0.6301.00
194_N310_R0.6301.00
424_T465_S0.6301.00
534_V537_A0.6291.00
550_M557_L0.6271.00
397_N492_P0.6251.00
266_Q270_G0.6251.00
289_E293_P0.6251.00
25_G77_E0.6241.00
156_S159_F0.6231.00
249_Q292_L0.6231.00
57_Y60_I0.6221.00
348_N390_D0.6221.00
90_S227_E0.6211.00
129_D300_E0.6211.00
425_S463_H0.6201.00
418_K469_T0.6191.00
380_L414_V0.6171.00
82_H133_K0.6161.00
87_K90_S0.6161.00
99_M317_Q0.6151.00
68_I72_V0.6141.00
262_W265_G0.6141.00
514_T517_E0.6141.00
333_Q411_A0.6121.00
423_D472_R0.6121.00
505_P508_E0.6101.00
508_E532_A0.6101.00
563_R567_L0.6071.00
431_R446_A0.6071.00
413_A489_Q0.6071.00
503_L507_T0.6061.00
148_S283_V0.6061.00
442_V446_A0.6051.00
96_L124_I0.6041.00
356_F543_L0.6041.00
551_E556_E0.6041.00
107_L116_M0.6041.00
328_Q331_D0.6031.00
444_R518_V0.6031.00
560_A565_R0.6001.00
254_G258_L0.6001.00
125_E128_Q0.5991.00
358_F548_T0.5991.00
480_R503_L0.5981.00
554_H557_L0.5981.00
54_L57_Y0.5981.00
115_D310_R0.5981.00
350_S545_N0.5971.00
513_E536_A0.5971.00
236_K240_F0.5971.00
360_L365_K0.5961.00
104_A107_L0.5961.00
342_V392_G0.5961.00
345_S391_S0.5941.00
550_M566_R0.5921.00
449_V483_L0.5921.00
50_P53_I0.5911.00
449_V487_L0.5901.00
186_N237_K0.5891.00
320_A409_A0.5881.00
92_M127_L0.5881.00
192_G230_W0.5871.00
493_I523_T0.5861.00
85_I132_L0.5861.00
476_G504_D0.5841.00
504_D507_T0.5841.00
209_D212_F0.5841.00
34_F66_F0.5831.00
512_M526_W0.5831.00
513_E516_F0.5821.00
415_L496_L0.5801.00
14_N88_I0.5781.00
361_R366_M0.5771.00
258_L262_W0.5771.00
447_K453_D0.5771.00
342_V357_S0.5761.00
190_K306_D0.5751.00
549_E561_N0.5751.00
97_Y101_E0.5751.00
322_Q405_K0.5741.00
349_S352_V0.5731.00
450_K511_L0.5731.00
176_V179_L0.5731.00
188_K229_D0.5721.00
272_L276_M0.5721.00
356_F541_V0.5721.00
16_R19_V0.5711.00
342_V394_V0.5701.00
118_G194_N0.5691.00
416_N419_P0.5691.00
396_L404_L0.5691.00
335_V492_P0.5681.00
82_H86_L0.5671.00
372_S528_T0.5671.00
264_A267_Q0.5661.00
307_S310_R0.5661.00
512_M536_A0.5651.00
232_E235_R0.5641.00
545_N549_E0.5611.00
129_D133_K0.5611.00
199_R203_A0.5611.00
105_L386_A0.5601.00
327_D405_K0.5601.00
27_V31_S0.5601.00
62_A66_F0.5591.00
141_A145_Y0.5581.00
118_G193_R0.5571.00
351_Q355_N0.5571.00
145_Y149_V0.5561.00
86_L89_V0.5561.00
37_F279_A0.5561.00
417_Q475_G0.5541.00
542_F550_M0.5521.00
124_I311_M0.5521.00
487_L518_V0.5521.00
447_K462_Y0.5521.00
535_E554_H0.5511.00
381_A414_V0.5501.00
326_G403_L0.5491.00
191_S195_V0.5491.00
137_P293_P0.5491.00
540_I553_T0.5491.00
141_A144_L0.5481.00
263_T267_Q0.5481.00
40_G275_T0.5481.00
110_R347_D0.5481.00
79_L83_H0.5471.00
158_P262_W0.5451.00
178_S181_V0.5451.00
429_N481_I0.5441.00
431_R488_L0.5441.00
189_L237_K0.5441.00
455_I458_L0.5441.00
154_F158_P0.5431.00
118_G122_E0.5421.00
28_T73_S0.5421.00
199_R219_F0.5421.00
140_S143_L0.5421.00
324_E328_Q0.5401.00
442_V445_A0.5401.00
558_L561_N0.5401.00
564_Y567_L0.5391.00
354_H357_S0.5391.00
389_P400_E0.5381.00
333_Q362_Q0.5381.00
348_N351_Q0.5381.00
377_S380_L0.5361.00
71_S75_Y0.5361.00
64_R68_I0.5361.00
519_L522_K0.5351.00
13_Q95_R0.5341.00
119_I310_R0.5331.00
372_S503_L0.5331.00
369_L534_V0.5331.00
272_L277_I0.5321.00
452_H455_I0.5321.00
253_A257_L0.5321.00
89_V124_I0.5321.00
17_L84_I0.5311.00
430_I433_G0.5311.00
177_V244_R0.5311.00
113_T117_L0.5311.00
544_E566_R0.5301.00
101_E104_A0.5301.00
405_K408_I0.5301.00
434_N438_S0.5291.00
193_R197_Y0.5291.00
426_I466_V0.5281.00
38_T41_F0.5281.00
343_T353_L0.5261.00
499_P528_T0.5241.00
46_A55_L0.5241.00
73_S76_V0.5241.00
169_V172_V0.5231.00
368_L527_I0.5231.00
127_L311_M0.5231.00
157_W160_A0.5231.00
361_R523_T0.5221.00
230_W234_E0.5221.00
169_V173_L0.5211.00
399_V407_Q0.5201.00
14_N84_I0.5191.00
455_I461_G0.5191.00
51_E55_L0.5191.00
507_T511_L0.5191.00
114_G198_S0.5181.00
13_Q16_R0.5181.00
332_L335_V0.5181.00
19_V22_I0.5171.00
76_V80_V0.5161.00
378_T387_L0.5161.00
40_G155_F0.5161.00
325_S329_I0.5141.00
359_T551_E0.5141.00
370_G376_K0.5141.00
487_L514_T0.5141.00
365_K521_G0.5141.00
333_Q396_L0.5141.00
505_P532_A0.5131.00
525_L541_V0.5131.00
122_E190_K0.5121.00
564_Y568_Y0.5121.00
242_R246_F0.5121.00
195_V199_R0.5121.00
268_A271_E0.5111.00
368_L543_L0.5111.00
415_L499_P0.5111.00
378_T382_L0.5101.00
326_G405_K0.5101.00
108_R111_F0.5091.00
32_A70_R0.5091.00
385_G401_T0.5081.00
29_I32_A0.5081.00
149_V153_G0.5071.00
425_S465_S0.5071.00
120_L124_I0.5061.00
476_G480_R0.5061.00
47_A50_P0.5061.00
360_L541_V0.5061.00
122_E125_E0.5061.00
79_L82_H0.5061.00
526_W534_V0.5061.00
225_K228_R0.5061.00
514_T518_V0.5051.00
339_F382_L0.5051.00
164_A168_F0.5051.00
480_R502_G0.5051.00
196_L200_L0.5041.00
426_I451_L0.5031.00
500_T503_L0.5031.00
496_L499_P0.5021.00
446_A484_A0.5021.00
276_M279_A0.5021.00
25_G29_I0.5011.00
141_A294_L0.5011.00
183_R187_A0.5011.00
283_V290_A0.5011.00
493_I525_L0.5011.00
499_P526_W0.5011.00
542_F549_E0.5001.00
328_Q332_L0.5001.00
518_V521_G0.5001.00
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
4ry2A 2 0.9722 100 0.071 Contact Map
4a82A 2 0.9913 100 0.102 Contact Map
4q4hB 1 0.9913 100 0.135 Contact Map
4f4cA 1 0.9739 100 0.141 Contact Map
3b5xA 2 0.9896 100 0.148 Contact Map
3b60A 2 0.9896 100 0.151 Contact Map
4q4hA 1 0.9896 100 0.152 Contact Map
3zdqA 2 0.9687 100 0.156 Contact Map
4mrsA 2 0.9983 100 0.156 Contact Map
4q9hA 1 0.993 100 0.163 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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