GREMLIN Database
CYDC - ATP-binding/permease protein CydC
UniProt: P94366 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 567 (549)
Sequences: 52214 (37106)
Seq/√Len: 1583.7

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
443_T453_L4.5401.00
336_G345_D4.5251.00
354_K530_E4.4591.00
333_K349_S4.3251.00
351_K354_K4.2861.00
335_S383_M3.9661.00
415_D419_N3.9581.00
530_E542_I3.8461.00
418_G430_A3.7511.00
438_A443_T3.6931.00
545_H555_Y3.6911.00
383_M390_S3.3741.00
443_T447_N3.3671.00
335_S385_E3.3671.00
331_E349_S3.2811.00
344_S538_R3.1801.00
334_L337_V3.1751.00
418_G454_E3.0151.00
429_S432_D3.0051.00
418_G422_R2.9581.00
552_N556_T2.9431.00
370_I518_A2.9211.00
338_S345_D2.8831.00
437_A453_L2.8721.00
430_A434_T2.7991.00
370_I486_L2.7041.00
402_N483_P2.5471.00
421_I437_A2.5111.00
435_R439_S2.5071.00
541_E551_K2.4921.00
333_K385_E2.4711.00
331_E351_K2.4481.00
350_F356_I2.4221.00
404_L482_R2.4011.00
434_T443_T2.3941.00
425_H432_D2.3881.00
375_G378_E2.3731.00
451_D455_G2.3701.00
146_I150_F2.3411.00
481_N513_K2.3401.00
41_T270_G2.3181.00
532_I542_I2.2951.00
544_T547_E2.2861.00
541_E553_G2.2861.00
395_Q398_S2.2661.00
348_L532_I2.2641.00
541_E552_N2.2351.00
418_G433_T2.2051.00
434_T438_A2.1971.00
331_E352_G2.1751.00
355_K528_M2.1581.00
41_T268_L2.1531.00
334_L348_L2.1071.00
338_S381_G2.1071.00
421_I433_T2.0901.00
442_L445_L2.0811.00
330_D387_N2.0601.00
336_G347_H2.0091.00
535_D554_V1.9721.00
507_L527_D1.9721.00
350_F516_F1.9691.00
340_G380_D1.9421.00
499_E521_R1.9371.00
378_E392_S1.9301.00
307_Q311_S1.9281.00
11_M87_D1.9161.00
432_D481_N1.9061.00
434_T447_N1.8821.00
95_Q314_G1.8741.00
152_D261_R1.8641.00
356_I530_E1.8581.00
435_R438_A1.8381.00
543_G547_E1.8281.00
422_R433_T1.8201.00
53_L57_G1.8021.00
436_A440_A1.8001.00
187_S224_R1.7961.00
422_R430_A1.7411.00
500_Y504_E1.7281.00
356_I532_I1.7231.00
369_L534_L1.7141.00
57_G61_I1.7101.00
494_L502_I1.7001.00
532_I539_V1.6861.00
329_Q387_N1.6591.00
332_L516_F1.6561.00
540_A554_V1.6501.00
390_S393_H1.6501.00
357_G528_M1.6481.00
343_V346_I1.6371.00
437_A446_V1.6361.00
182_D304_K1.6281.00
430_A454_E1.6221.00
439_S508_D1.6091.00
441_G501_E1.6031.00
119_G305_T1.5981.00
358_I369_L1.5971.00
444_E447_N1.5921.00
210_L213_S1.5891.00
535_D540_A1.5871.00
354_K529_D1.5851.00
421_I479_L1.5781.00
458_G463_A1.5651.00
355_K517_L1.5521.00
434_T453_L1.5461.00
457_I464_L1.5361.00
331_E387_N1.5261.00
541_E556_T1.5221.00
526_L546_N1.5191.00
547_E551_K1.5131.00
358_I532_I1.5031.00
519_T524_W1.4911.00
95_Q99_L1.4721.00
431_E434_T1.4711.00
432_D435_R1.4711.00
345_D538_R1.4591.00
37_S274_T1.4581.00
372_I384_I1.4451.00
351_K530_E1.4441.00
437_A443_T1.4441.00
190_R224_R1.4361.00
98_R314_G1.4341.00
149_F156_A1.4281.00
428_A479_L1.4271.00
339_V368_T1.4251.00
260_L264_D1.4191.00
451_D456_R1.4081.00
508_D511_E1.4071.00
256_V260_L1.4051.00
430_A433_T1.4051.00
374_G405_Y1.3861.00
328_D387_N1.3641.00
54_P58_F1.3501.00
361_A535_D1.3481.00
504_E508_D1.3421.00
194_H221_V1.3371.00
425_H428_A1.3331.00
546_N550_E1.3321.00
432_D479_L1.3311.00
445_L468_Q1.3191.00
339_V377_L1.3181.00
339_V372_I1.3161.00
404_L477_A1.3151.00
334_L373_L1.3141.00
33_A278_L1.3131.00
149_F153_R1.3111.00
458_G461_G1.3101.00
554_V557_K1.3091.00
361_A554_V1.3031.00
95_Q310_L1.3021.00
414_D456_R1.3011.00
337_V379_P1.2961.00
417_L472_V1.2961.00
214_H423_F1.2911.00
330_D352_G1.2791.00
357_G525_M1.2711.00
379_P391_R1.2711.00
176_V179_R1.2651.00
183_R228_A1.2591.00
21_L69_M1.2541.00
422_R428_A1.2531.00
319_T322_Q1.2491.00
362_S498_T1.2461.00
335_S347_H1.2441.00
449_L455_G1.2391.00
437_A442_L1.2341.00
331_E388_G1.2231.00
356_I516_F1.2131.00
373_L516_F1.2121.00
155_S275_A1.2091.00
187_S228_A1.2051.00
10_G87_D1.2031.00
30_I143_A1.1941.00
261_R266_D1.1911.00
168_I172_L1.1901.00
206_R211_S1.1881.00
431_E435_R1.1851.00
338_S344_S1.1821.00
436_A478_F1.1781.00
531_I545_H1.1761.00
429_S479_L1.1751.00
105_K377_L1.1741.00
439_S478_F1.1731.00
448_N468_Q1.1731.00
510_F515_V1.1721.00
389_T393_H1.1661.00
336_G381_G1.1641.00
442_L446_V1.1641.00
148_V275_A1.1621.00
216_K220_Y1.1601.00
445_L449_L1.1551.00
346_I369_L1.1541.00
187_S190_R1.1531.00
434_T437_A1.1501.00
352_G483_P1.1491.00
201_G411_Y1.1441.00
464_L472_V1.1421.00
396_D400_Q1.1411.00
198_S214_H1.1371.00
268_L271_P1.1331.00
212_K216_K1.1321.00
348_L369_L1.1251.00
350_F514_L1.1231.00
470_Q492_A1.1211.00
329_Q352_G1.1101.00
389_T394_L1.1041.00
24_I69_M1.1001.00
92_F309_I1.0981.00
545_H549_L1.0981.00
441_G498_T1.0981.00
90_K94_D1.0961.00
223_E227_K1.0921.00
447_N452_G1.0821.00
466_G471_R1.0761.00
519_T525_M1.0751.00
355_K515_V1.0721.00
107_E111_Q1.0701.00
446_V453_L1.0681.00
334_L384_I1.0661.00
111_Q189_Q1.0601.00
37_S41_T1.0571.00
332_L373_L1.0571.00
384_I391_R1.0531.00
154_T266_D1.0531.00
108_G111_Q1.0521.00
303_G307_Q1.0521.00
16_T20_C1.0511.00
105_K371_D1.0511.00
50_T54_P1.0491.00
406_I477_A1.0481.00
48_G51_S1.0461.00
258_L272_A1.0451.00
372_I379_P1.0371.00
334_L369_L1.0331.00
34_E38_E1.0311.00
95_Q98_R1.0311.00
444_E448_N1.0311.00
94_D98_R1.0271.00
162_A250_S1.0261.00
157_I161_A1.0261.00
477_A485_L1.0251.00
214_H217_N1.0221.00
79_Q83_R1.0171.00
180_K231_S1.0161.00
218_I222_S1.0141.00
398_S401_K1.0131.00
440_A475_A1.0111.00
354_K542_I1.0111.00
332_L386_V1.0091.00
441_G505_T1.0081.00
35_W55_V1.0081.00
231_S234_R1.0071.00
21_L72_A1.0061.00
333_K388_G1.0061.00
190_R221_V1.0061.00
257_F261_R1.0021.00
153_R157_I1.0011.00
483_P513_K0.9951.00
220_Y224_R0.9951.00
489_E520_H0.9941.00
362_S471_R0.9921.00
441_G504_E0.9911.00
419_N422_R0.9911.00
485_L513_K0.9901.00
410_P473_A0.9881.00
451_D454_E0.9861.00
142_A146_I0.9841.00
122_Q302_A0.9811.00
418_G453_L0.9801.00
226_R230_M0.9781.00
553_G556_T0.9771.00
517_L528_M0.9771.00
435_R481_N0.9761.00
367_S371_D0.9731.00
386_V399_W0.9721.00
533_V554_V0.9721.00
534_L539_V0.9701.00
386_V484_I0.9661.00
14_I79_Q0.9641.00
333_K347_H0.9631.00
319_T393_H0.9631.00
194_H217_N0.9631.00
428_A432_D0.9611.00
521_R524_W0.9561.00
205_L214_H0.9561.00
318_E395_Q0.9561.00
12_K16_T0.9561.00
18_I77_V0.9551.00
474_L487_L0.9531.00
21_L76_I0.9491.00
345_D381_G0.9471.00
441_G508_D0.9461.00
357_G519_T0.9461.00
457_I463_A0.9461.00
87_D91_S0.9441.00
119_G302_A0.9431.00
337_V372_I0.9421.00
217_N221_V0.9411.00
394_L399_W0.9401.00
61_I65_A0.9361.00
151_Q271_P0.9351.00
13_R17_L0.9351.00
100_G315_F0.9341.00
436_A479_L0.9321.00
37_S271_P0.9321.00
433_T453_L0.9301.00
262_L267_I0.9281.00
501_E504_E0.9261.00
421_I472_V0.9251.00
115_L308_E0.9241.00
418_G434_T0.9221.00
447_N453_L0.9211.00
172_L176_V0.9181.00
176_V235_V0.9091.00
213_S217_N0.9071.00
210_L214_H0.9071.00
364_A534_L0.9061.00
158_I257_F0.9051.00
438_A447_N0.9041.00
223_E226_R0.9011.00
300_Q304_K0.8981.00
406_I474_L0.8971.00
169_F242_A0.8961.00
91_S95_Q0.8951.00
379_P392_S0.8951.00
182_D186_K0.8951.00
458_G462_R0.8921.00
183_R187_S0.8901.00
439_S509_L0.8891.00
183_R231_S0.8891.00
374_G486_L0.8881.00
327_S387_N0.8871.00
497_E501_E0.8861.00
54_P57_G0.8851.00
383_M392_S0.8801.00
180_K228_A0.8791.00
491_T502_I0.8791.00
38_E42_G0.8781.00
547_E550_E0.8771.00
219_F223_E0.8751.00
28_A65_A0.8751.00
422_R427_S0.8751.00
259_G263_I0.8731.00
539_V542_I0.8721.00
103_F107_E0.8711.00
346_I539_V0.8701.00
442_L448_N0.8701.00
355_K510_F0.8701.00
86_A90_K0.8691.00
92_F116_A0.8661.00
379_P384_I0.8651.00
374_G403_L0.8641.00
433_T479_L0.8621.00
375_G396_D0.8621.00
412_I472_V0.8611.00
224_R228_A0.8601.00
323_L389_T0.8601.00
357_G531_I0.8581.00
398_S402_N0.8551.00
457_I461_G0.8551.00
323_L393_H0.8461.00
355_K507_L0.8451.00
391_R399_W0.8431.00
145_V156_A0.8431.00
397_G401_K0.8421.00
503_K519_T0.8421.00
338_S380_D0.8391.00
100_G316_K0.8361.00
535_D538_R0.8331.00
167_I171_I0.8301.00
416_T419_N0.8291.00
216_K219_F0.8291.00
95_Q313_P0.8281.00
352_G387_N0.8271.00
325_A394_L0.8251.00
261_R264_D0.8231.00
184_Q229_T0.8221.00
213_S216_K0.8221.00
18_I80_Y0.8201.00
482_R513_K0.8191.00
176_V180_K0.8191.00
332_L484_I0.8191.00
412_I469_A0.8171.00
440_A471_R0.8161.00
552_N557_K0.8151.00
203_E371_D0.8151.00
306_I310_L0.8141.00
28_A69_M0.8141.00
485_L510_F0.8121.00
148_V156_A0.8111.00
204_T208_L0.8101.00
24_I65_A0.8091.00
92_F306_I0.8081.00
112_M309_I0.8051.00
217_N220_Y0.8041.00
147_Y151_Q0.8031.00
68_G72_A0.8021.00
549_L556_T0.8021.00
56_I60_L0.7981.00
485_L515_V0.7971.00
385_E388_G0.7961.00
439_S443_T0.7951.00
403_L484_I0.7941.00
35_W62_A0.7931.00
11_M83_R0.7931.00
553_G558_L0.7911.00
99_L312_Q0.7901.00
41_T44_F0.7871.00
221_V224_R0.7861.00
171_I175_L0.7851.00
325_A328_D0.7851.00
215_S219_F0.7841.00
322_Q398_S0.7841.00
421_I453_L0.7831.00
470_Q493_H0.7831.00
379_P383_M0.7821.00
442_L472_V0.7811.00
394_L398_S0.7811.00
316_K378_E0.7811.00
102_R106_K0.7801.00
324_E398_S0.7801.00
335_S349_S0.7801.00
359_I533_V0.7771.00
330_D514_L0.7761.00
35_W58_F0.7761.00
179_R183_R0.7761.00
503_K524_W0.7741.00
422_R425_H0.7731.00
262_L272_A0.7721.00
152_D156_A0.7721.00
318_E322_Q0.7721.00
126_Y299_G0.7721.00
499_E503_K0.7711.00
102_R315_F0.7711.00
150_F153_R0.7701.00
111_Q115_L0.7691.00
437_A440_A0.7681.00
202_L206_R0.7661.00
430_A453_L0.7651.00
401_K480_G0.7651.00
212_K215_S0.7651.00
28_A62_A0.7641.00
38_E41_T0.7641.00
201_G204_T0.7641.00
38_E55_V0.7641.00
228_A231_S0.7631.00
450_P455_G0.7601.00
20_C24_I0.7601.00
161_A164_P0.7581.00
58_F61_I0.7571.00
96_L104_A0.7571.00
154_T261_R0.7561.00
27_A31_M0.7551.00
126_Y296_T0.7551.00
325_A398_S0.7541.00
154_T157_I0.7521.00
34_E147_Y0.7511.00
143_A146_I0.7511.00
65_A69_M0.7501.00
413_F420_N0.7491.00
187_S221_V0.7481.00
362_S489_E0.7481.00
466_G493_H0.7471.00
318_E321_L0.7471.00
318_E396_D0.7431.00
191_L225_Y0.7411.00
270_G274_T0.7411.00
55_V58_F0.7411.00
51_S54_P0.7401.00
409_H469_A0.7391.00
422_R426_P0.7391.00
227_K231_S0.7381.00
344_S536_G0.7371.00
546_N549_L0.7371.00
122_Q298_N0.7351.00
343_V534_L0.7351.00
327_S483_P0.7341.00
230_M234_R0.7331.00
442_L453_L0.7311.00
224_R227_K0.7301.00
353_K512_D0.7301.00
34_E37_S0.7261.00
445_L448_N0.7261.00
156_A275_A0.7261.00
71_V75_K0.7241.00
147_Y150_F0.7241.00
26_T139_I0.7221.00
138_A142_A0.7201.00
22_T136_S0.7201.00
57_G60_L0.7161.00
245_F249_L0.7161.00
491_T499_E0.7161.00
385_E390_S0.7111.00
91_S94_D0.7111.00
449_L464_L0.7101.00
40_V273_L0.7101.00
115_L119_G0.7091.00
14_I83_R0.7081.00
14_I76_I0.7081.00
261_R265_G0.7071.00
430_A437_A0.7061.00
151_Q274_T0.7051.00
353_K514_L0.7051.00
137_M288_E0.7051.00
91_S310_L0.7021.00
149_F160_V0.7021.00
144_V282_Y0.7011.00
92_F310_L0.7001.00
64_I68_G0.6991.00
350_F354_K0.6981.00
11_M14_I0.6961.00
502_I505_T0.6961.00
551_K554_V0.6951.00
471_R498_T0.6941.00
417_L446_V0.6931.00
399_W403_L0.6921.00
412_I457_I0.6921.00
499_E524_W0.6921.00
155_S261_R0.6911.00
386_V391_R0.6911.00
168_I171_I0.6871.00
175_L179_R0.6871.00
434_T446_V0.6871.00
530_E544_T0.6851.00
356_I542_I0.6851.00
134_M138_A0.6851.00
525_M528_M0.6841.00
152_D267_I0.6831.00
324_E395_Q0.6831.00
414_D458_G0.6811.00
474_L478_F0.6811.00
554_V558_L0.6801.00
34_E151_Q0.6801.00
425_H481_N0.6801.00
42_G45_N0.6791.00
370_I516_F0.6781.00
341_R368_T0.6771.00
42_G51_S0.6761.00
372_I377_L0.6761.00
144_V281_E0.6751.00
146_I149_F0.6751.00
183_R186_K0.6741.00
425_H480_G0.6731.00
99_L314_G0.6721.00
541_E554_V0.6711.00
119_G185_W0.6711.00
371_D377_L0.6711.00
358_I516_F0.6711.00
13_R16_T0.6701.00
17_L76_I0.6691.00
88_L120_I0.6691.00
95_Q312_Q0.6681.00
322_Q395_Q0.6671.00
441_G444_E0.6661.00
304_K308_E0.6661.00
123_F303_G0.6651.00
432_D436_A0.6651.00
108_G193_N0.6631.00
486_L516_F0.6621.00
334_L346_I0.6621.00
152_D155_S0.6591.00
329_Q514_L0.6591.00
233_L237_F0.6591.00
313_P317_E0.6581.00
30_I33_A0.6561.00
94_D215_S0.6531.00
114_T192_S0.6531.00
299_G302_A0.6521.00
85_G89_R0.6521.00
185_W188_Y0.6521.00
541_E548_L0.6501.00
415_D456_R0.6471.00
348_L539_V0.6461.00
189_Q305_T0.6461.00
88_L123_F0.6441.00
474_L502_I0.6441.00
340_G381_G0.6421.00
439_S505_T0.6421.00
555_Y558_L0.6391.00
541_E549_L0.6391.00
545_H548_L0.6371.00
244_D287_R0.6371.00
387_N483_P0.6361.00
414_D463_A0.6351.00
249_L253_T0.6351.00
499_E523_H0.6341.00
422_R437_A0.6341.00
85_G124_R0.6341.00
53_L56_I0.6331.00
41_T45_N0.6331.00
333_K383_M0.6321.00
92_F120_I0.6321.00
257_F260_L0.6311.00
22_T73_R0.6311.00
328_D402_N0.6301.00
83_R86_A0.6301.00
425_H429_S0.6301.00
346_I534_L0.6301.00
180_K183_R0.6281.00
101_P105_K0.6271.00
123_F306_I0.6251.00
542_I547_E0.6241.00
25_Q70_T0.6241.00
409_H460_G0.6241.00
355_K527_D0.6241.00
551_K556_T0.6231.00
24_I28_A0.6201.00
433_T436_A0.6191.00
337_V382_G0.6191.00
31_M62_A0.6181.00
440_A474_L0.6181.00
78_Y129_L0.6181.00
136_S140_V0.6161.00
441_G502_I0.6161.00
484_I514_L0.6161.00
173_L239_S0.6151.00
536_G540_A0.6151.00
471_R494_L0.6151.00
438_A453_L0.6141.00
259_G262_L0.6131.00
103_F112_M0.6121.00
530_E547_E0.6121.00
370_I405_Y0.6111.00
351_K356_I0.6101.00
16_T19_T0.6091.00
337_V347_H0.6081.00
159_L279_A0.6081.00
111_Q305_T0.6071.00
321_L325_A0.6071.00
553_G557_K0.6061.00
416_T454_E0.6061.00
396_D399_W0.6051.00
125_R295_A0.6041.00
452_G455_G0.6041.00
496_I499_E0.6041.00
350_F355_K0.6041.00
420_N472_V0.6031.00
169_F246_F0.6021.00
114_T118_E0.6011.00
465_S468_Q0.5991.00
433_T437_A0.5991.00
267_I271_P0.5991.00
531_I544_T0.5981.00
284_L288_E0.5961.00
362_S519_T0.5961.00
438_A444_E0.5961.00
86_A222_S0.5951.00
100_G103_F0.5941.00
258_L262_L0.5941.00
330_D483_P0.5941.00
81_A128_E0.5931.00
185_W301_E0.5931.00
49_I53_L0.5921.00
11_M84_T0.5911.00
164_P168_I0.5911.00
187_S225_Y0.5911.00
51_S55_V0.5891.00
302_A305_T0.5891.00
541_E557_K0.5881.00
440_A478_F0.5871.00
181_A232_T0.5871.00
425_H479_L0.5871.00
231_S235_V0.5861.00
406_I487_L0.5861.00
337_V384_I0.5861.00
404_L480_G0.5851.00
443_T446_V0.5841.00
204_T207_F0.5841.00
93_L97_F0.5841.00
69_M72_A0.5841.00
379_P390_S0.5811.00
417_L457_I0.5811.00
526_L545_H0.5811.00
503_K517_L0.5811.00
114_T188_Y0.5801.00
436_A475_A0.5801.00
494_L498_T0.5791.00
533_V541_E0.5791.00
121_S124_R0.5791.00
319_T323_L0.5771.00
346_I532_I0.5761.00
344_S347_H0.5761.00
82_A85_G0.5751.00
25_Q69_M0.5751.00
137_M141_P0.5741.00
484_I516_F0.5731.00
50_T53_L0.5731.00
328_D352_G0.5731.00
505_T508_D0.5721.00
167_I170_M0.5711.00
37_S270_G0.5711.00
172_L175_L0.5701.00
316_K375_G0.5691.00
495_D498_T0.5691.00
422_R479_L0.5681.00
253_T257_F0.5681.00
371_D405_Y0.5671.00
362_S494_L0.5671.00
60_L64_I0.5661.00
227_K230_M0.5661.00
194_H198_S0.5661.00
461_G469_A0.5651.00
120_I306_I0.5651.00
125_R129_L0.5651.00
114_T189_Q0.5641.00
144_V278_L0.5641.00
102_R342_S0.5631.00
320_P323_L0.5621.00
183_R224_R0.5621.00
186_K190_R0.5601.00
180_K232_T0.5601.00
435_R509_L0.5601.00
153_R156_A0.5591.00
498_T502_I0.5581.00
467_G495_D0.5581.00
386_V394_L0.5581.00
389_T398_S0.5571.00
321_L395_Q0.5561.00
201_G413_F0.5551.00
478_F509_L0.5551.00
154_T257_F0.5551.00
406_I490_P0.5541.00
109_T113_V0.5501.00
78_Y82_A0.5481.00
67_H71_V0.5481.00
549_L552_N0.5481.00
101_P376_F0.5471.00
118_E185_W0.5461.00
97_F100_G0.5461.00
14_I80_Y0.5461.00
533_V540_A0.5461.00
332_L350_F0.5461.00
319_T395_Q0.5461.00
421_I424_Y0.5451.00
104_A107_E0.5451.00
350_F532_I0.5441.00
194_H214_H0.5441.00
321_L393_H0.5441.00
106_K342_S0.5431.00
504_E527_D0.5431.00
115_L305_T0.5431.00
540_A552_N0.5421.00
328_D386_V0.5411.00
133_K288_E0.5401.00
145_V149_F0.5401.00
338_S343_V0.5401.00
165_I169_F0.5371.00
510_F513_K0.5371.00
359_I525_M0.5371.00
34_E274_T0.5371.00
248_M252_A0.5361.00
431_E438_A0.5361.00
407_P410_P0.5351.00
58_F62_A0.5341.00
490_P519_T0.5341.00
368_T372_I0.5341.00
184_Q232_T0.5331.00
110_G193_N0.5331.00
338_S347_H0.5331.00
141_P145_V0.5331.00
237_F241_F0.5311.00
321_L398_S0.5301.00
351_K514_L0.5301.00
355_K512_D0.5301.00
533_V553_G0.5291.00
358_I534_L0.5271.00
72_A76_I0.5271.00
505_T509_L0.5271.00
160_V164_P0.5271.00
191_L195_F0.5261.00
368_T377_L0.5251.00
165_I168_I0.5251.00
29_I66_R0.5241.00
517_L525_M0.5231.00
359_I522_L0.5231.00
34_E278_L0.5221.00
446_V449_L0.5221.00
535_D557_K0.5221.00
417_L442_L0.5221.00
367_S370_I0.5211.00
428_A433_T0.5211.00
150_F154_T0.5201.00
137_M289_V0.5201.00
478_F505_T0.5201.00
349_S352_G0.5191.00
159_L282_Y0.5181.00
225_Y229_T0.5181.00
496_I523_H0.5171.00
503_K527_D0.5171.00
320_P324_E0.5161.00
516_F532_I0.5161.00
420_N476_R0.5141.00
43_L51_S0.5131.00
26_T30_I0.5121.00
327_S330_D0.5121.00
440_A445_L0.5111.00
504_E507_L0.5111.00
140_V144_V0.5111.00
471_R493_H0.5111.00
334_L372_I0.5101.00
278_L285_P0.5091.00
509_L512_D0.5091.00
129_L133_K0.5091.00
490_P517_L0.5081.00
519_T523_H0.5081.00
375_G391_R0.5081.00
328_D331_E0.5071.00
205_L211_S0.5061.00
189_Q301_E0.5061.00
35_W38_E0.5051.00
35_W59_F0.5051.00
137_M140_V0.5051.00
75_K79_Q0.5051.00
358_I518_A0.5031.00
85_G120_I0.5031.00
373_L486_L0.5031.00
188_Y192_S0.5021.00
267_I272_A0.5021.00
446_V452_G0.5011.00
139_I143_A0.5011.00
116_A120_I0.5011.00
318_E323_L0.5011.00
498_T501_E0.5001.00
416_T456_R0.5001.00
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
4ry2A 2 0.9735 100 0.084 Contact Map
4a82A 2 0.9947 100 0.11 Contact Map
4f4cA 1 0.9735 100 0.151 Contact Map
4q4hB 1 0.9929 100 0.152 Contact Map
3b60A 2 0.9912 100 0.157 Contact Map
3b5xA 2 0.9912 100 0.158 Contact Map
4q4hA 1 0.9929 100 0.166 Contact Map
3zdqA 2 0.9718 100 0.167 Contact Map
4mrsA 2 1 100 0.167 Contact Map
4q9hA 1 0.9929 100 0.171 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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