TIG - BACSU - GREMLIN Contacts

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TIG - Trigger factor

UniProt:	P80698	Sequences: MSVKWEKQEGNEGVLTVEVDAETFKTALDDAFKKVVKQVSIPGFRKGKIPRGLFEQRFGVEALYQDALDILLPVEYPKAVEEAGIEPVDRPEIDVEKIEKGESLIFTAKVTVKPEVKLGEYKGLGIEKDDTTVTDEDVQNELKALQERQAELVVKEEGAVEEGNTVVLDFEGFVDGEAFEGGKAENYSLEVGSGSFIPGFEDQLVGLEAGAEKDVEVTFPEEYHAEDLAGKPAVFKVKIHEIKAKELPELDDEFAKDIDEEVETLAELTEKTKKRLEEAKENEADAKLREELVLKASENAEIDVPQAMVDTELDRMLKEFEQRLQMQGMNLELYTQFSGQDEAALKEQMKEDAEKRVKSNLTLEAIAKAENLEVSDEEVDAELTKMAEAYNMPVENIKQAIGSTDAMKEDLKVRKAIDFLVENR	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	424 (412)
Sequences:	3600 (2510)
Seq/√Len:	123.7

ECOLI - TIG
BACSU - TIG

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
207_L	213_K	3.930	1.00
212_E	238_K	3.848	1.00
216_E	232_P	3.484	1.00
160_V	191_V	3.352	1.00
143_K	146_Q	3.247	1.00
186_N	240_H	3.180	1.00
155_K	158_G	2.923	1.00
214_D	234_V	2.851	1.00
154_V	241_E	2.849	1.00
117_K	301_E	2.632	1.00
277_E	281_E	2.605	1.00
153_V	246_E	2.604	1.00
174_V	231_K	2.603	1.00
139_Q	143_K	2.592	1.00
207_L	239_I	2.583	1.00
306_Q	310_D	2.574	1.00
171_E	183_K	2.501	1.00
365_A	369_A	2.485	1.00
40_S	46_K	2.480	1.00
378_E	415_K	2.474	1.00
270_E	274_K	2.452	1.00
295_K	298_E	2.450	1.00
75_E	106_F	2.424	1.00
173_F	236_K	2.410	1.00
294_L	355_K	2.374	1.00
78_K	82_E	2.372	1.00
171_E	178_A	2.334	1.00
208_E	211_A	2.319	1.00
171_E	236_K	2.312	1.00
159_A	208_E	2.311	1.00
99_E	102_E	2.263	1.00
365_A	368_K	2.255	1.00
226_E	229_A	2.219	1.00
209_A	242_I	2.197	1.00
136_E	140_N	2.185	1.00
273_K	277_E	2.159	1.00
135_D	273_K	2.145	1.00
214_D	236_K	2.128	1.00
216_E	234_V	2.120	1.00
167_V	240_H	2.103	1.00
384_T	388_E	2.083	1.00
161_E	244_A	2.061	1.00
169_D	240_H	2.059	1.00
218_T	232_P	2.051	1.00
139_Q	269_T	2.045	1.00
162_E	202_D	2.006	1.00
350_K	354_E	1.980	1.00
382_E	385_K	1.978	1.00
141_E	144_A	1.953	1.00
266_A	270_E	1.943	1.00
354_E	358_K	1.933	1.00
174_V	233_A	1.932	1.00
396_N	399_Q	1.931	1.00
393_P	396_N	1.925	1.00
18_E	103_S	1.924	1.00
212_E	236_K	1.912	1.00
134_T	137_D	1.904	1.00
287_K	291_E	1.895	1.00
136_E	139_Q	1.893	1.00
147_E	245_K	1.861	1.00
294_L	298_E	1.854	1.00
271_K	274_K	1.839	1.00
137_D	280_K	1.829	1.00
274_K	278_E	1.808	1.00
314_D	346_K	1.802	1.00
341_D	344_A	1.793	1.00
74_V	78_K	1.791	1.00
143_K	147_E	1.764	1.00
274_K	277_E	1.745	1.00
344_A	347_E	1.741	1.00
162_E	205_V	1.708	1.00
347_E	350_K	1.706	1.00
262_V	271_K	1.706	1.00
160_V	166_V	1.682	1.00
255_A	265_L	1.681	1.00
97_K	105_I	1.666	1.00
267_E	270_E	1.664	1.00
263_E	267_E	1.643	1.00
14_V	107_T	1.639	1.00
167_V	241_E	1.624	1.00
78_K	81_E	1.613	1.00
18_E	105_I	1.605	1.00
140_N	143_K	1.560	1.00
318_K	321_E	1.556	1.00
140_N	144_A	1.543	1.00
381_A	384_T	1.539	1.00
252_D	255_A	1.538	1.00
146_Q	250_L	1.537	1.00
146_Q	247_L	1.522	1.00
25_K	29_D	1.517	1.00
145_L	268_L	1.480	1.00
173_F	178_A	1.478	1.00
158_G	244_A	1.472	1.00
264_T	267_E	1.471	1.00
127_E	291_E	1.468	1.00
163_G	190_E	1.467	1.00
351_E	354_E	1.462	1.00
204_L	207_L	1.459	1.00
370_E	419_F	1.459	1.00
119_G	300_A	1.450	1.00
394_V	398_K	1.448	1.00
265_L	269_T	1.435	1.00
12_E	111_T	1.427	1.00
121_Y	370_E	1.423	1.00
6_E	14_V	1.421	1.00
23_T	26_T	1.419	1.00
382_E	414_R	1.417	1.00
158_G	164_N	1.412	1.00
168_L	237_V	1.411	1.00
295_K	299_N	1.400	1.00
120_E	123_G	1.393	1.00
281_E	285_D	1.374	1.00
290_E	294_L	1.353	1.00
314_D	318_K	1.346	1.00
418_D	422_E	1.340	1.00
253_E	256_K	1.339	1.00
33_K	36_V	1.335	1.00
142_L	265_L	1.328	1.00
380_D	398_K	1.313	1.00
266_A	269_T	1.311	1.00
152_L	165_T	1.290	1.00
81_E	84_G	1.290	1.00
167_V	188_S	1.268	1.00
376_D	408_K	1.254	1.00
374_V	411_L	1.252	1.00
252_D	264_T	1.250	1.00
300_A	362_T	1.248	1.00
278_E	282_N	1.248	1.00
306_Q	350_K	1.247	1.00
169_D	238_K	1.239	0.99
381_A	385_K	1.227	0.99
213_K	239_I	1.226	0.99
150_A	245_K	1.223	0.99
178_A	183_K	1.223	0.99
125_G	295_K	1.213	0.99
51_R	55_E	1.212	0.99
12_E	109_K	1.210	0.99
10_G	303_D	1.208	0.99
252_D	256_K	1.207	0.99
383_L	394_V	1.190	0.99
111_T	307_A	1.186	0.99
375_S	378_E	1.186	0.99
199_G	202_D	1.183	0.99
167_V	243_K	1.182	0.99
312_E	356_R	1.181	0.99
20_D	23_T	1.169	0.99
192_G	201_E	1.157	0.99
29_D	33_K	1.155	0.99
165_T	190_E	1.155	0.99
378_E	381_A	1.154	0.99
16_T	105_I	1.154	0.99
310_D	346_K	1.139	0.99
313_L	350_K	1.138	0.99
190_E	245_K	1.137	0.99
207_L	215_V	1.132	0.99
17_V	106_F	1.131	0.99
160_V	239_I	1.129	0.99
250_L	265_L	1.125	0.99
374_V	412_K	1.125	0.99
204_L	213_K	1.116	0.99
203_Q	215_V	1.116	0.99
151_E	246_E	1.111	0.99
142_L	146_Q	1.107	0.99
32_F	63_L	1.099	0.99
209_A	241_E	1.098	0.99
376_D	380_D	1.095	0.99
322_Q	326_M	1.094	0.99
22_E	25_K	1.088	0.99
168_L	204_L	1.086	0.99
77_P	81_E	1.084	0.99
26_T	30_D	1.084	0.99
285_D	421_V	1.083	0.99
304_V	309_V	1.078	0.99
384_T	394_V	1.075	0.99
377_E	380_D	1.073	0.98
270_E	273_K	1.072	0.98
255_A	268_L	1.068	0.98
155_K	244_A	1.068	0.98
395_E	399_Q	1.067	0.98
122_K	370_E	1.067	0.98
166_V	242_I	1.067	0.98
129_D	287_K	1.067	0.98
322_Q	325_Q	1.064	0.98
377_E	381_A	1.060	0.98
15_L	79_A	1.060	0.98
310_D	314_D	1.059	0.98
155_K	161_E	1.056	0.98
215_V	237_V	1.055	0.98
380_D	384_T	1.049	0.98
19_V	71_L	1.049	0.98
49_I	54_F	1.046	0.98
141_E	279_A	1.042	0.98
73_P	77_P	1.042	0.98
318_K	322_Q	1.041	0.98
367_A	416_A	1.038	0.98
158_G	161_E	1.031	0.98
52_G	56_Q	1.028	0.98
173_F	234_V	1.026	0.98
271_K	275_R	1.026	0.98
363_L	416_A	1.019	0.98
149_Q	257_D	1.014	0.98
135_D	139_Q	1.010	0.98
52_G	55_E	1.009	0.98
116_V	365_A	1.004	0.98
92_E	109_K	0.995	0.98
313_L	346_K	0.994	0.98
191_V	205_V	0.993	0.98
343_A	347_E	0.991	0.97
113_K	364_E	0.990	0.97
135_D	138_V	0.989	0.97
279_A	283_E	0.989	0.97
144_A	147_E	0.989	0.97
30_D	70_I	0.987	0.97
169_D	185_E	0.980	0.97
41_I	49_I	0.979	0.97
31_A	70_I	0.979	0.97
217_V	235_F	0.978	0.97
3_V	83_A	0.977	0.97
22_E	103_S	0.975	0.97
31_A	66_D	0.974	0.97
160_V	204_L	0.972	0.97
173_F	183_K	0.970	0.97
165_T	243_K	0.969	0.97
146_Q	265_L	0.969	0.97
351_E	355_K	0.968	0.97
270_E	277_E	0.966	0.97
207_L	211_A	0.965	0.97
129_D	288_L	0.964	0.97
340_Q	348_Q	0.960	0.97
23_T	74_V	0.960	0.97
97_K	102_E	0.960	0.97
22_E	26_T	0.957	0.97
302_I	358_K	0.952	0.97
312_E	315_R	0.952	0.97
179_F	182_G	0.951	0.97
153_V	244_A	0.950	0.97
251_D	254_F	0.949	0.97
16_T	107_T	0.949	0.97
27_A	30_D	0.946	0.97
32_F	54_F	0.945	0.97
189_L	196_F	0.943	0.97
80_V	87_P	0.942	0.97
319_E	323_R	0.936	0.96
399_Q	403_S	0.934	0.96
296_A	362_T	0.932	0.96
29_D	51_R	0.930	0.96
137_D	140_N	0.930	0.96
317_L	346_K	0.927	0.96
14_V	109_K	0.923	0.96
297_S	359_S	0.921	0.96
217_V	233_A	0.920	0.96
139_Q	142_L	0.916	0.96
160_V	205_V	0.915	0.96
366_I	416_A	0.912	0.96
218_T	221_E	0.906	0.96
373_E	408_K	0.906	0.96
372_L	419_F	0.903	0.96
160_V	242_I	0.902	0.96
117_K	369_A	0.897	0.95
35_V	39_V	0.894	0.95
221_E	230_G	0.894	0.95
187_Y	195_S	0.890	0.95
168_L	239_I	0.889	0.95
157_E	208_E	0.886	0.95
86_E	113_K	0.886	0.95
291_E	295_K	0.882	0.95
133_V	276_L	0.882	0.95
292_L	420_L	0.880	0.95
259_D	264_T	0.880	0.95
162_E	190_E	0.873	0.95
128_K	288_L	0.873	0.95
343_A	346_K	0.871	0.95
385_K	388_E	0.861	0.94
8_Q	14_V	0.857	0.94
342_E	346_K	0.857	0.94
76_Y	110_V	0.855	0.94
170_F	184_A	0.854	0.94
202_D	205_V	0.853	0.94
368_K	371_N	0.852	0.94
165_T	188_S	0.849	0.94
282_N	286_A	0.849	0.94
63_L	67_A	0.846	0.94
75_E	78_K	0.841	0.94
283_E	287_K	0.840	0.94
160_V	207_L	0.834	0.93
285_D	418_D	0.826	0.93
68_L	104_L	0.825	0.93
340_Q	344_A	0.825	0.93
292_L	421_V	0.821	0.93
301_E	358_K	0.820	0.93
219_F	223_Y	0.818	0.93
4_K	16_T	0.813	0.92
316_M	353_A	0.812	0.92
144_A	148_R	0.812	0.92
215_V	234_V	0.811	0.92
154_V	209_A	0.810	0.92
157_E	161_E	0.808	0.92
119_G	299_N	0.808	0.92
366_I	370_E	0.807	0.92
323_R	327_Q	0.806	0.92
297_S	300_A	0.805	0.92
23_T	78_K	0.804	0.92
34_K	38_Q	0.803	0.92
172_G	223_Y	0.802	0.92
215_V	233_A	0.801	0.92
65_Q	69_D	0.801	0.92
94_D	107_T	0.801	0.92
321_E	325_Q	0.801	0.92
7_K	13_G	0.799	0.92
27_A	67_A	0.799	0.92
278_E	281_E	0.797	0.92
136_E	143_K	0.795	0.92
372_L	416_A	0.794	0.92
39_V	54_F	0.792	0.91
204_L	239_I	0.786	0.91
167_V	186_N	0.784	0.91
379_V	408_K	0.784	0.91
142_L	255_A	0.783	0.91
150_A	247_L	0.783	0.91
152_L	190_E	0.782	0.91
386_M	397_I	0.780	0.91
416_A	420_L	0.780	0.91
170_F	187_Y	0.779	0.91
54_F	58_F	0.779	0.91
135_D	277_E	0.778	0.91
197_I	223_Y	0.776	0.91
208_E	242_I	0.773	0.90
76_Y	87_P	0.773	0.90
19_V	106_F	0.772	0.90
154_V	243_K	0.770	0.90
367_A	412_K	0.768	0.90
35_V	63_L	0.768	0.90
158_G	208_E	0.766	0.90
166_V	191_V	0.764	0.90
175_D	231_K	0.763	0.90
169_D	186_N	0.763	0.90
31_A	34_K	0.763	0.90
30_D	34_K	0.762	0.90
166_V	204_L	0.761	0.90
396_N	400_A	0.761	0.90
135_D	269_T	0.756	0.89
262_V	267_E	0.754	0.89
46_K	49_I	0.752	0.89
419_F	422_E	0.751	0.89
382_E	411_L	0.750	0.89
123_G	299_N	0.750	0.89
142_L	268_L	0.743	0.89
172_G	179_F	0.741	0.88
311_T	314_D	0.736	0.88
352_D	355_K	0.735	0.88
310_D	313_L	0.734	0.88
360_N	413_V	0.733	0.88
152_L	243_K	0.730	0.88
24_F	71_L	0.730	0.88
89_D	111_T	0.727	0.88
13_G	112_V	0.727	0.88
306_Q	354_E	0.724	0.87
138_V	273_K	0.723	0.87
173_F	176_G	0.722	0.87
194_G	201_E	0.720	0.87
120_E	299_N	0.720	0.87
177_E	227_D	0.720	0.87
39_V	63_L	0.717	0.87
200_F	235_F	0.717	0.87
146_Q	251_D	0.716	0.87
116_V	300_A	0.715	0.87
38_Q	46_K	0.710	0.86
142_L	272_T	0.709	0.86
5_W	13_G	0.709	0.86
310_D	350_K	0.709	0.86
80_V	85_I	0.709	0.86
368_K	412_K	0.706	0.86
31_A	67_A	0.704	0.86
161_E	208_E	0.704	0.86
266_A	273_K	0.704	0.86
173_F	177_E	0.702	0.86
291_E	294_L	0.701	0.86
151_E	257_D	0.700	0.85
172_G	219_F	0.700	0.85
380_D	383_L	0.699	0.85
256_K	263_E	0.697	0.85
32_F	51_R	0.696	0.85
25_K	101_G	0.694	0.85
248_P	254_F	0.694	0.85
60_V	100_K	0.693	0.85
20_D	103_S	0.690	0.85
145_L	254_F	0.688	0.85
412_K	416_A	0.686	0.84
30_D	33_K	0.686	0.84
161_E	164_N	0.684	0.84
129_D	291_E	0.683	0.84
228_L	231_K	0.681	0.84
42_P	57_R	0.681	0.84
280_K	283_E	0.680	0.84
372_L	412_K	0.680	0.84
379_V	407_M	0.679	0.84
132_T	135_D	0.679	0.84
392_M	396_N	0.679	0.84
145_L	148_R	0.678	0.84
298_E	355_K	0.676	0.83
27_A	71_L	0.676	0.83
347_E	351_E	0.673	0.83
297_S	358_K	0.673	0.83
29_D	55_E	0.672	0.83
316_M	349_M	0.672	0.83
9_E	12_E	0.671	0.83
383_L	387_A	0.671	0.83
189_L	193_S	0.670	0.83
325_Q	328_G	0.669	0.83
41_I	53_L	0.669	0.83
162_E	194_G	0.667	0.83
307_A	311_T	0.667	0.83
251_D	257_D	0.666	0.83
293_V	359_S	0.665	0.82
21_A	101_G	0.665	0.82
88_V	308_M	0.665	0.82
251_D	255_A	0.663	0.82
172_G	200_F	0.663	0.82
128_K	284_A	0.663	0.82
225_A	228_L	0.659	0.82
166_V	239_I	0.658	0.82
131_T	284_A	0.658	0.82
171_E	238_K	0.657	0.82
407_M	411_L	0.655	0.82
132_T	277_E	0.654	0.81
395_E	398_K	0.653	0.81
388_E	391_N	0.652	0.81
344_A	348_Q	0.651	0.81
219_F	222_E	0.648	0.81
259_D	271_K	0.648	0.81
93_I	108_A	0.648	0.81
61_E	65_Q	0.646	0.81
160_V	211_A	0.645	0.81
28_L	63_L	0.645	0.81
126_I	292_L	0.644	0.80
120_E	124_L	0.644	0.80
276_L	280_K	0.644	0.80
223_Y	235_F	0.644	0.80
272_T	275_R	0.643	0.80
220_P	223_Y	0.643	0.80
172_G	235_F	0.642	0.80
96_E	105_I	0.641	0.80
313_L	317_L	0.640	0.80
259_D	262_V	0.640	0.80
393_P	399_Q	0.638	0.80
51_R	54_F	0.638	0.80
176_G	234_V	0.637	0.80
199_G	232_P	0.636	0.80
141_E	275_R	0.636	0.80
325_Q	330_N	0.634	0.79
357_V	361_L	0.634	0.79
207_L	212_E	0.631	0.79
204_L	237_V	0.630	0.79
174_V	222_E	0.628	0.79
275_R	278_E	0.627	0.79
277_E	280_K	0.627	0.79
96_E	107_T	0.623	0.78
213_K	237_V	0.623	0.78
124_L	296_A	0.622	0.78
50_P	53_L	0.620	0.78
130_D	280_K	0.620	0.78
211_A	242_I	0.619	0.78
49_I	53_L	0.619	0.78
186_N	238_K	0.618	0.78
76_Y	80_V	0.618	0.78
152_L	245_K	0.617	0.78
168_L	195_S	0.614	0.77
314_D	317_L	0.614	0.77
155_K	242_I	0.614	0.77
345_L	349_M	0.613	0.77
324_L	328_G	0.612	0.77
288_L	291_E	0.610	0.77
73_P	106_F	0.609	0.77
26_T	29_D	0.609	0.77
190_E	195_S	0.608	0.77
85_I	110_V	0.607	0.76
174_V	177_E	0.607	0.76
246_E	249_E	0.605	0.76
319_E	356_R	0.603	0.76
366_I	420_L	0.602	0.76
383_L	398_K	0.602	0.76
126_I	288_L	0.602	0.76
200_F	220_P	0.601	0.76
11_N	111_T	0.600	0.76
162_E	191_V	0.597	0.75
121_Y	366_I	0.596	0.75
302_I	362_T	0.595	0.75
142_L	250_L	0.593	0.75
119_G	301_E	0.593	0.75
121_Y	420_L	0.593	0.75
172_G	182_G	0.592	0.75
197_I	202_D	0.591	0.74
170_F	219_F	0.591	0.74
288_L	421_V	0.591	0.74
85_I	112_V	0.590	0.74
124_L	295_K	0.589	0.74
194_G	198_P	0.589	0.74
116_V	302_I	0.588	0.74
200_F	223_Y	0.587	0.74
170_F	223_Y	0.586	0.74
53_L	56_Q	0.585	0.74
28_L	64_Y	0.584	0.74
285_D	414_R	0.584	0.74
193_S	197_I	0.583	0.73
378_E	411_L	0.582	0.73
189_L	201_E	0.581	0.73
312_E	360_N	0.580	0.73
191_V	204_L	0.580	0.73
60_V	64_Y	0.579	0.73
296_A	420_L	0.579	0.73
315_R	318_K	0.578	0.73
184_A	187_Y	0.578	0.73
139_Q	266_A	0.576	0.73
118_L	365_A	0.576	0.73
21_A	25_K	0.576	0.73
87_P	110_V	0.575	0.72
252_D	262_V	0.574	0.72
188_S	243_K	0.573	0.72
132_T	273_K	0.572	0.72
146_Q	249_E	0.571	0.72
398_K	401_I	0.571	0.72
146_Q	254_F	0.571	0.72
145_L	258_I	0.570	0.72
39_V	58_F	0.570	0.72
397_I	401_I	0.570	0.72
374_V	415_K	0.568	0.72
170_F	200_F	0.568	0.72
352_D	356_R	0.567	0.71
286_A	290_E	0.567	0.71
27_A	74_V	0.567	0.71
133_V	138_V	0.566	0.71
285_D	289_R	0.566	0.71
268_L	272_T	0.565	0.71
194_G	202_D	0.563	0.71
203_Q	217_V	0.562	0.71
133_V	273_K	0.562	0.71
182_G	223_Y	0.560	0.70
304_V	357_V	0.560	0.70
17_V	75_E	0.560	0.70
170_F	196_F	0.559	0.70
166_V	237_V	0.559	0.70
12_E	306_Q	0.556	0.70
3_V	15_L	0.556	0.70
40_S	49_I	0.555	0.70
43_G	47_G	0.554	0.70
190_E	193_S	0.552	0.69
224_H	229_A	0.551	0.69
138_V	272_T	0.550	0.69
68_L	72_L	0.550	0.69
222_E	232_P	0.550	0.69
24_F	28_L	0.549	0.69
168_L	189_L	0.549	0.69
121_Y	369_A	0.547	0.69
28_L	32_F	0.547	0.69
28_L	67_A	0.547	0.69
304_V	354_E	0.546	0.69
210_G	240_H	0.545	0.68
97_K	101_G	0.544	0.68
2_S	18_E	0.544	0.68
36_V	49_I	0.544	0.68
133_V	277_E	0.544	0.68
296_A	299_N	0.543	0.68
193_S	201_E	0.543	0.68
252_D	266_A	0.543	0.68
382_E	386_M	0.543	0.68
133_V	280_K	0.543	0.68
380_D	394_V	0.542	0.68
58_F	66_D	0.541	0.68
394_V	397_I	0.540	0.68
154_V	167_V	0.539	0.68
209_A	239_I	0.539	0.68
5_W	83_A	0.539	0.68
138_V	269_T	0.537	0.67
196_F	200_F	0.537	0.67
15_L	110_V	0.536	0.67
409_E	413_V	0.536	0.67
321_E	331_L	0.536	0.67
261_E	264_T	0.535	0.67
160_V	209_A	0.535	0.67
155_K	159_A	0.533	0.67
178_A	181_G	0.533	0.67
131_T	280_K	0.533	0.67
36_V	54_F	0.532	0.67
117_K	365_A	0.532	0.67
252_D	265_L	0.531	0.66
408_K	412_K	0.531	0.66
323_R	326_M	0.529	0.66
220_P	235_F	0.526	0.66
17_V	79_A	0.526	0.66
272_T	276_L	0.525	0.66
149_Q	254_F	0.524	0.65
137_D	276_L	0.522	0.65
184_A	188_S	0.521	0.65
189_L	197_I	0.520	0.65
141_E	145_L	0.520	0.65
181_G	223_Y	0.519	0.65
387_A	397_I	0.519	0.65
316_M	356_R	0.516	0.64
320_F	324_L	0.515	0.64
317_L	345_L	0.513	0.64
393_P	400_A	0.513	0.64
93_I	357_V	0.513	0.64
126_I	295_K	0.511	0.64
169_D	184_A	0.510	0.63
15_L	108_A	0.509	0.63
194_G	199_G	0.508	0.63
43_G	50_P	0.508	0.63
223_Y	233_A	0.507	0.63
172_G	184_A	0.506	0.63
24_F	67_A	0.506	0.63
203_Q	233_A	0.505	0.63
31_A	35_V	0.504	0.62
99_E	103_S	0.503	0.62
225_A	229_A	0.503	0.62
309_V	354_E	0.503	0.62
66_D	70_I	0.501	0.62
196_F	235_F	0.501	0.62
142_L	269_T	0.500	0.62

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
1w26A	1	0.9693	100	0.11	Contact Map
1t11A	3	0.8844	100	0.126	Contact Map
3gtyX	1	0.9387	100	0.147	Contact Map
1p9yA	1	0.2759	100	0.696	Contact Map
1zxjA	4	0.4245	100	0.708	Contact Map
2d3o1	1	0.2358	100	0.713	Contact Map
2nsaA	2	0.3726	100	0.724	Contact Map
2nscA	2	0.2571	99.9	0.729	Contact Map
1hxvA	1	0.2005	99.7	0.812	Contact Map
3prbA	2	0.3632	99.7	0.822	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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