GREMLIN Database
LUTP - L-lactate permease
UniProt: P71067 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 563 (504)
Sequences: 1571 (990)
Seq/√Len: 44.1

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
528_K531_D6.4311.00
52_I56_L5.0871.00
27_F49_I4.5921.00
454_F458_S4.2411.00
500_A551_T4.2371.00
264_V268_W4.1141.00
415_Q418_K3.9121.00
237_V257_V3.7901.00
55_V65_A3.7761.00
222_E273_T3.6941.00
553_L557_V3.6881.00
51_L65_A3.6511.00
229_V265_F3.5751.00
393_V397_F3.4401.00
460_V544_L3.2431.00
30_W35_K3.1121.00
411_K415_Q3.0841.00
327_K331_T3.0791.00
96_K412_E2.9551.00
97_T401_I2.9171.00
124_S258_S2.9061.00
111_T116_L2.8971.00
162_I213_I2.8511.00
544_L548_C2.8281.00
180_V480_G2.7571.00
27_F31_A2.7321.00
51_L433_V2.7281.00
492_M497_S2.6771.00
317_M390_I2.6671.00
47_L69_A2.6521.00
73_A425_A2.6321.00
92_K416_E2.6081.00
215_S219_K2.6031.00
53_I57_V2.5471.00
197_R243_N2.5301.00
20_A57_V2.4041.00
395_S399_T2.3521.00
37_M41_T2.3141.00
96_K405_D2.3121.00
549_I553_L2.2531.00
404_K408_T2.2221.00
299_Y303_Q2.2041.00
396_K406_W2.1661.00
407_G411_K2.1611.00
233_S261_A2.1511.00
545_L549_I2.1511.00
391_A395_S2.1351.00
236_V240_L2.1351.00
177_I195_V2.0830.99
302_G306_K2.0810.99
309_S398_I2.0500.99
48_G52_I2.0480.99
460_V548_C2.0460.99
194_M495_V2.0310.99
484_K498_V2.0310.99
329_A332_G1.9980.99
402_S405_D1.9980.99
147_V523_V1.9950.99
197_R239_Y1.9890.99
157_A519_A1.9510.99
204_V235_A1.9280.99
434_T440_S1.9260.99
305_F309_S1.9010.99
225_P269_W1.8980.99
253_L257_V1.8960.99
306_K400_A1.8400.99
180_V498_V1.8320.99
323_I326_V1.8200.98
240_L244_F1.8170.98
321_W387_A1.8070.98
96_K408_T1.8020.98
30_W34_I1.8000.98
305_F312_L1.7980.98
44_L426_S1.7800.98
342_K347_V1.7720.98
403_W407_G1.7590.98
233_S258_S1.7380.98
18_A446_T1.7320.98
168_V472_D1.7190.98
300_R303_Q1.7110.98
480_G498_V1.6940.98
90_L392_A1.6770.97
31_A37_M1.6750.97
233_S257_V1.6730.97
473_T508_G1.6670.97
211_I223_I1.6590.97
340_F377_K1.6570.97
116_L226_A1.6510.97
326_V329_A1.6490.97
81_G421_I1.6490.97
101_D104_R1.6410.97
241_S253_L1.6350.97
122_A210_L1.6310.97
260_A264_V1.6130.97
70_T347_V1.6050.97
208_L227_I1.5950.97
195_V503_S1.5810.96
169_A195_V1.5740.96
509_K515_S1.5710.96
187_P190_E1.5590.96
205_F208_L1.5520.96
181_E186_I1.5510.96
463_W540_S1.5480.96
178_T247_P1.5410.96
325_S329_A1.5370.96
45_A48_G1.5340.96
106_S308_W1.5310.96
196_G242_S1.5220.95
38_K42_A1.5210.95
118_A159_I1.5150.95
239_Y244_F1.5140.95
180_V191_I1.4970.95
193_Q243_N1.4730.95
303_Q306_K1.4680.94
204_V231_G1.4580.94
198_Q554_Q1.4560.94
31_A45_A1.4540.94
277_F280_E1.4320.94
71_Q436_S1.4310.94
198_Q550_I1.4260.93
119_L230_S1.4140.93
105_S299_Y1.4120.93
226_A265_F1.4000.93
472_D505_G1.3910.93
20_A23_V1.3720.92
92_K413_T1.3690.92
165_T510_M1.3640.92
224_W227_I1.3640.92
265_F269_W1.3580.92
129_L137_A1.3540.92
181_E188_A1.3510.92
114_R277_F1.3480.91
137_A530_S1.3300.91
147_V525_L1.3210.91
390_I394_L1.3160.90
42_A128_F1.3150.90
90_L314_L1.3090.90
179_A182_G1.2910.90
158_G535_F1.2910.90
552_F556_H1.2890.89
198_Q503_S1.2770.89
19_L23_V1.2750.89
56_L62_A1.2750.89
122_A126_G1.2750.89
401_I405_D1.2530.88
230_S262_L1.2530.88
205_F542_F1.2510.88
172_A175_I1.2420.88
122_A163_A1.2380.87
89_F392_A1.2320.87
126_G163_A1.2310.87
453_M456_F1.2280.87
538_K542_F1.2210.87
66_L69_A1.2110.86
68_S71_Q1.2010.86
95_V101_D1.2010.86
467_F536_T1.1980.86
154_L312_L1.1980.86
122_A195_V1.1940.85
516_I533_F1.1940.85
480_G484_K1.1930.85
237_V254_S1.1790.85
239_Y243_N1.1740.84
234_F251_D1.1710.84
507_T543_L1.1690.84
202_L546_L1.1670.84
114_R151_F1.1650.84
154_L535_F1.1610.84
175_I178_T1.1580.84
55_V62_A1.1550.84
545_L548_C1.1520.83
232_V393_V1.1390.83
127_A167_P1.1350.82
75_Y432_Y1.1310.82
456_F545_L1.1290.82
56_L59_R1.1260.82
209_Y539_H1.1230.82
520_C532_L1.1180.81
199_L238_Q1.1140.81
225_P271_P1.1090.81
309_S312_L1.1070.81
136_G171_G1.1070.81
329_A333_H1.1070.81
320_V330_L1.1060.81
491_G494_P1.0990.80
158_G532_L1.0960.80
237_V253_L1.0950.80
450_T453_M1.0890.80
313_L398_I1.0870.80
117_Q149_L1.0820.79
409_V412_E1.0790.79
265_F268_W1.0760.79
229_V261_A1.0730.79
46_T430_F1.0720.79
215_S220_A1.0700.78
51_L55_V1.0690.78
317_M391_A1.0670.78
201_F550_I1.0650.78
23_V49_I1.0640.78
92_K412_E1.0610.78
276_R280_E1.0610.78
135_F471_S1.0600.78
118_A214_M1.0570.78
184_T498_V1.0530.77
511_I537_I1.0530.77
112_D274_T1.0520.77
186_I495_V1.0490.77
36_R531_D1.0460.77
83_I175_I1.0440.77
428_V482_L1.0410.77
83_I172_A1.0390.76
169_A472_D1.0350.76
73_A429_G1.0320.76
119_L262_L1.0320.76
208_L224_W1.0300.76
67_M70_T1.0260.75
97_T173_I1.0230.75
78_L388_I1.0140.75
116_L223_I1.0140.75
121_I142_S1.0130.75
196_G243_N1.0090.74
44_L422_L1.0090.74
240_L546_L1.0050.74
372_I436_S1.0010.74
538_K541_L1.0010.74
74_V376_Y0.9990.74
232_V236_V0.9970.73
116_L489_S0.9960.73
456_F552_F0.9930.73
98_G156_A0.9920.73
412_E415_Q0.9910.73
441_T485_V0.9900.73
212_I220_A0.9890.73
392_A406_W0.9880.73
322_G382_G0.9870.73
27_F46_T0.9870.73
481_N484_K0.9820.72
326_V330_L0.9790.72
86_T410_F0.9770.72
339_V456_F0.9770.72
190_E495_V0.9770.72
97_T399_T0.9750.72
69_A433_V0.9750.72
119_L227_I0.9740.72
89_F406_W0.9710.71
320_V326_V0.9700.71
81_G424_I0.9660.71
380_V383_S0.9610.71
47_L133_A0.9600.70
179_A443_L0.9590.70
404_K545_L0.9590.70
117_Q151_F0.9530.70
58_Y442_T0.9520.70
531_D534_R0.9480.70
82_W386_T0.9350.68
455_T548_C0.9330.68
55_V260_A0.9320.68
446_T449_L0.9320.68
434_T439_M0.9300.68
487_A510_M0.9290.68
179_A477_L0.9270.68
93_I409_V0.9270.68
169_A506_V0.9240.68
416_E420_P0.9230.67
16_L57_V0.9200.67
215_S221_L0.9190.67
225_P265_F0.9170.67
204_V232_V0.9110.66
102_I299_Y0.9090.66
193_Q239_Y0.9080.66
185_G429_G0.9070.66
233_S237_V0.9050.66
114_R276_R0.9030.66
135_F172_A0.9020.66
396_K400_A0.8940.65
124_S259_M0.8930.65
26_I30_W0.8910.65
313_L391_A0.8890.65
71_Q432_Y0.8880.64
191_I498_V0.8870.64
165_T472_D0.8860.64
379_E382_G0.8860.64
92_K409_V0.8860.64
165_T506_V0.8830.64
462_G479_F0.8820.64
476_N502_S0.8820.64
257_V261_A0.8790.64
68_S436_S0.8790.64
208_L228_L0.8790.64
167_P472_D0.8750.63
163_A210_L0.8740.63
121_I149_L0.8730.63
342_K375_V0.8730.63
509_K514_Q0.8730.63
327_K330_L0.8710.63
309_S313_L0.8710.63
53_I58_Y0.8680.63
450_T457_F0.8660.62
504_G508_G0.8660.62
216_G442_T0.8630.62
306_K309_S0.8620.62
247_P250_P0.8600.62
404_K407_G0.8580.62
183_P428_V0.8580.62
313_L394_L0.8580.62
227_I231_G0.8530.61
238_Q472_D0.8520.61
435_N474_S0.8520.61
200_P239_Y0.8520.61
128_F315_T0.8510.61
260_A272_K0.8510.61
31_A233_S0.8470.61
107_V508_G0.8450.61
227_I232_V0.8440.60
244_F493_D0.8430.60
518_V539_H0.8420.60
144_A446_T0.8390.60
490_V497_S0.8390.60
241_S257_V0.8370.60
197_R554_Q0.8350.60
66_L549_I0.8340.60
55_V332_G0.8340.60
293_N305_F0.8340.60
445_M489_S0.8320.59
247_P262_L0.8300.59
129_L141_I0.8300.59
444_G485_V0.8270.59
257_V326_V0.8270.59
37_M45_A0.8200.58
330_L340_F0.8140.58
17_S57_V0.8120.57
45_A481_N0.8110.57
461_L482_L0.8080.57
167_P195_V0.8070.57
166_A251_D0.8050.57
85_V414_V0.8050.57
395_S401_I0.8040.57
146_L213_I0.8040.57
19_L292_T0.8020.57
275_F278_A0.7980.56
168_V510_M0.7970.56
460_V541_L0.7970.56
541_L545_L0.7920.56
410_F414_V0.7910.55
48_G342_K0.7910.55
49_I52_I0.7900.55
192_S423_T0.7870.55
52_I59_R0.7850.55
31_A311_F0.7830.55
298_A549_I0.7820.55
179_A468_I0.7810.55
180_V477_L0.7810.55
80_I135_F0.7810.55
248_E322_G0.7800.54
465_G475_A0.7800.54
314_L386_T0.7800.54
46_T88_V0.7800.54
127_A163_A0.7800.54
69_A429_G0.7750.54
324_P329_A0.7750.54
200_P235_A0.7740.54
151_F455_T0.7740.54
278_A293_N0.7740.54
233_S511_I0.7720.54
135_F473_T0.7710.54
128_F516_I0.7700.53
158_G536_T0.7690.53
297_P301_G0.7680.53
339_V380_V0.7660.53
225_P268_W0.7660.53
296_A528_K0.7650.53
28_F145_L0.7640.53
132_A172_A0.7640.53
110_I154_L0.7630.53
191_I484_K0.7630.53
230_S233_S0.7620.53
177_I191_I0.7600.53
339_V381_L0.7600.53
56_L293_N0.7580.52
463_W544_L0.7570.52
549_I557_V0.7560.52
188_A192_S0.7540.52
318_I388_I0.7520.52
509_K518_V0.7510.52
174_G246_G0.7500.52
118_A457_F0.7490.51
418_K422_L0.7480.51
232_V237_V0.7480.51
546_L550_I0.7470.51
26_I339_V0.7470.51
518_V530_S0.7450.51
102_I303_Q0.7450.51
120_L266_L0.7420.51
43_G162_I0.7420.51
264_V296_A0.7410.51
312_L316_A0.7380.50
324_P328_S0.7380.50
455_T490_V0.7380.50
122_A231_G0.7370.50
487_A492_M0.7360.50
198_Q201_F0.7360.50
192_S247_P0.7350.50
294_P297_P0.7340.50
295_A316_A0.7340.50
225_P229_V0.7340.50
163_A167_P0.7340.50
62_A268_W0.7320.50
339_V344_L0.7310.50
276_R279_G0.7300.50
423_T505_G0.7290.50
121_I125_F0.7280.49
189_M192_S0.7270.49
221_L263_A0.7270.49
76_G423_T0.7240.49
66_L488_L0.7240.49
67_M343_W0.7230.49
328_S332_G0.7230.49
82_W385_G0.7230.49
472_D503_S0.7210.49
447_L450_T0.7210.49
190_E194_M0.7200.49
510_M525_L0.7190.49
199_L203_S0.7150.48
177_I476_N0.7150.48
195_V393_V0.7140.48
501_N509_K0.7140.48
114_R275_F0.7120.48
218_R273_T0.7100.48
68_S460_V0.7090.48
130_E171_G0.7080.48
62_A339_V0.7070.47
86_T388_I0.7070.47
36_R42_A0.7060.47
156_A308_W0.7060.47
88_V105_S0.7060.47
123_F254_S0.7060.47
32_L36_R0.7040.47
345_N373_E0.7040.47
397_F403_W0.7030.47
25_I131_G0.7030.47
28_F46_T0.7030.47
318_I321_W0.7020.47
48_G332_G0.7020.47
266_L269_W0.7020.47
52_I63_E0.7020.47
128_F247_P0.7000.47
537_I542_F0.6970.46
169_A238_Q0.6960.46
329_A339_V0.6960.46
48_G51_L0.6940.46
208_L490_V0.6920.46
59_R268_W0.6910.46
80_I170_F0.6900.46
129_L431_A0.6900.46
59_R393_V0.6890.46
327_K333_H0.6890.46
531_D535_F0.6890.46
302_G316_A0.6890.46
89_F410_F0.6880.46
328_S377_K0.6870.46
295_A373_E0.6860.45
512_S517_A0.6850.45
19_L407_G0.6850.45
211_I227_I0.6840.45
293_N394_L0.6820.45
200_P203_S0.6790.45
157_A482_L0.6770.45
152_N155_Y0.6750.44
267_K298_A0.6740.44
88_V137_A0.6730.44
239_Y251_D0.6730.44
47_L51_L0.6720.44
419_L422_L0.6720.44
311_F343_W0.6710.44
39_G104_R0.6690.44
325_S332_G0.6680.44
133_A137_A0.6680.44
173_I322_G0.6670.44
32_L39_G0.6640.43
165_T168_V0.6640.43
128_F132_A0.6620.43
33_A118_A0.6620.43
76_G201_F0.6610.43
95_V104_R0.6610.43
104_R145_L0.6610.43
403_W456_F0.6610.43
451_G457_F0.6600.43
128_F388_I0.6600.43
316_A407_G0.6590.43
99_Q304_I0.6590.43
215_S519_A0.6590.43
20_A53_I0.6590.43
137_A473_T0.6580.43
110_I265_F0.6580.43
422_L426_S0.6580.43
26_I341_L0.6580.43
154_L389_L0.6570.43
70_T313_L0.6550.42
415_Q545_L0.6550.42
200_P251_D0.6550.42
454_F490_V0.6540.42
440_S477_L0.6540.42
472_D509_K0.6530.42
313_L332_G0.6530.42
26_I66_L0.6530.42
545_L553_L0.6520.42
503_S554_Q0.6520.42
431_A513_P0.6520.42
169_A177_I0.6520.42
402_S488_L0.6510.42
122_A507_T0.6500.42
238_Q506_V0.6500.42
242_S250_P0.6500.42
513_P517_A0.6500.42
300_R545_L0.6480.42
126_G210_L0.6470.42
177_I502_S0.6470.42
57_V70_T0.6460.42
132_A175_I0.6460.42
522_A532_L0.6450.42
48_G146_L0.6440.41
168_V473_T0.6430.41
25_I467_F0.6430.41
438_G553_L0.6420.41
317_M394_L0.6410.41
267_K552_F0.6400.41
346_A349_E0.6400.41
443_L518_V0.6400.41
36_R162_I0.6380.41
506_V514_Q0.6380.41
325_S328_S0.6380.41
78_L263_A0.6370.41
254_S313_L0.6370.41
36_R95_V0.6350.41
61_P224_W0.6350.41
56_L294_P0.6350.41
196_G238_Q0.6340.41
62_A402_S0.6330.40
405_D408_T0.6320.40
52_I341_L0.6320.40
25_I516_I0.6310.40
245_L253_L0.6300.40
345_N348_G0.6300.40
311_F431_A0.6290.40
171_G471_S0.6290.40
76_G222_E0.6290.40
201_F503_S0.6270.40
254_S503_S0.6260.40
54_A433_V0.6250.40
128_F314_L0.6230.39
408_T411_K0.6230.39
38_K41_T0.6220.39
424_I515_S0.6220.39
204_V495_V0.6220.39
29_F196_G0.6210.39
21_A234_F0.6210.39
297_P394_L0.6200.39
134_G171_G0.6170.39
86_T180_V0.6170.39
22_L443_L0.6160.39
402_S456_F0.6160.39
48_G73_A0.6120.38
231_G235_A0.6120.38
65_A74_V0.6110.38
122_A139_V0.6110.38
502_S506_V0.6100.38
60_M437_S0.6090.38
64_K68_S0.6090.38
161_L510_M0.6090.38
261_A414_V0.6090.38
154_L158_G0.6080.38
218_R222_E0.6070.38
51_L66_L0.6060.38
85_V232_V0.6050.38
22_L26_I0.6040.38
195_V244_F0.6020.38
70_T397_F0.6010.37
323_I330_L0.6010.37
189_M193_Q0.6010.37
130_E136_G0.6000.37
278_A292_T0.6000.37
218_R398_I0.6000.37
117_Q314_L0.5970.37
449_L453_M0.5970.37
123_F250_P0.5970.37
152_N277_F0.5970.37
169_A502_S0.5970.37
431_A434_T0.5950.37
133_A388_I0.5950.37
102_I225_P0.5940.37
86_T389_L0.5940.37
424_I518_V0.5940.37
295_A531_D0.5930.37
128_F160_C0.5930.37
312_L545_L0.5920.37
66_L300_R0.5910.37
224_W300_R0.5900.36
341_L375_V0.5900.36
181_E191_I0.5900.36
31_A34_I0.5890.36
220_A227_I0.5890.36
102_I304_I0.5890.36
172_A177_I0.5890.36
339_V402_S0.5880.36
403_W408_T0.5880.36
166_A506_V0.5880.36
124_S230_S0.5880.36
131_G308_W0.5870.36
103_I308_W0.5870.36
407_G453_M0.5870.36
162_I326_V0.5860.36
126_G166_A0.5850.36
174_G199_L0.5840.36
505_G540_S0.5840.36
26_I457_F0.5820.36
306_K332_G0.5810.36
83_I256_L0.5800.36
146_L228_L0.5790.36
214_M392_A0.5790.36
297_P403_W0.5790.36
504_G511_I0.5790.36
297_P411_K0.5790.36
207_P501_N0.5790.36
48_G480_G0.5780.35
431_A474_S0.5760.35
222_E225_P0.5750.35
167_P234_F0.5750.35
299_Y304_I0.5740.35
294_P400_A0.5730.35
23_V53_I0.5730.35
20_A177_I0.5710.35
83_I90_L0.5710.35
80_I179_A0.5710.35
443_L468_I0.5700.35
26_I273_T0.5680.35
450_T532_L0.5660.34
245_L550_I0.5630.34
407_G415_Q0.5620.34
267_K398_I0.5620.34
49_I446_T0.5600.34
170_F250_P0.5590.34
78_L373_E0.5590.34
441_T445_M0.5590.34
62_A66_L0.5580.34
29_F533_F0.5550.33
23_V398_I0.5540.33
455_T552_F0.5540.33
331_T382_G0.5530.33
301_G305_F0.5520.33
293_N297_P0.5510.33
239_Y550_I0.5510.33
164_N514_Q0.5510.33
209_Y491_G0.5500.33
248_E384_A0.5500.33
36_R101_D0.5500.33
474_S477_L0.5500.33
55_V66_L0.5490.33
199_L472_D0.5490.33
456_F459_P0.5480.33
55_V418_K0.5480.33
194_M496_L0.5470.33
280_E292_T0.5460.33
518_V523_V0.5460.33
118_A122_A0.5460.33
85_V89_F0.5460.33
298_A394_L0.5450.33
346_A374_A0.5440.32
490_V552_F0.5440.32
97_T461_L0.5440.32
50_A433_V0.5430.32
63_E398_I0.5430.32
111_T475_A0.5420.32
454_F536_T0.5420.32
348_G373_E0.5400.32
21_A493_D0.5400.32
15_L305_F0.5400.32
45_A49_I0.5400.32
423_T444_G0.5380.32
104_R504_G0.5380.32
19_L294_P0.5380.32
137_A176_P0.5380.32
86_T175_I0.5380.32
135_F171_G0.5380.32
295_A402_S0.5360.32
91_Y95_V0.5360.32
57_V305_F0.5350.32
85_V116_L0.5340.32
434_T513_P0.5340.32
50_A53_I0.5320.31
131_G318_I0.5310.31
339_V342_K0.5290.31
26_I228_L0.5290.31
53_I201_F0.5290.31
62_A316_A0.5290.31
185_G261_A0.5250.31
162_I522_A0.5240.31
279_G300_R0.5240.31
494_P553_L0.5240.31
21_A191_I0.5240.31
503_S506_V0.5220.31
185_G253_L0.5220.31
206_I543_L0.5220.31
472_D476_N0.5220.31
40_Y419_L0.5210.31
33_A530_S0.5200.30
272_K297_P0.5190.30
15_L278_A0.5190.30
295_A403_W0.5190.30
347_V375_V0.5190.30
58_Y416_E0.5180.30
16_L56_L0.5170.30
117_Q420_P0.5170.30
250_P254_S0.5170.30
110_I248_E0.5170.30
314_L430_F0.5160.30
237_V241_S0.5150.30
76_G85_V0.5140.30
484_K488_L0.5140.30
43_G427_V0.5130.30
144_A534_R0.5120.30
88_V388_I0.5120.30
501_N514_Q0.5100.30
84_I248_E0.5100.30
22_L398_I0.5100.30
212_I223_I0.5100.30
66_L190_E0.5090.30
240_L257_V0.5080.30
252_V456_F0.5080.30
296_A411_K0.5080.30
433_V461_L0.5080.30
241_S245_L0.5080.30
217_F220_A0.5070.29
313_L390_I0.5070.29
149_L499_A0.5070.29
320_V332_G0.5060.29
87_S133_A0.5060.29
427_V514_Q0.5060.29
39_G424_I0.5060.29
59_R549_I0.5060.29
62_A408_T0.5050.29
29_F53_I0.5050.29
292_T295_A0.5040.29
178_T182_G0.5040.29
93_I401_I0.5040.29
183_P229_V0.5040.29
427_V512_S0.5030.29
103_I467_F0.5030.29
127_A164_N0.5030.29
69_A487_A0.5020.29
29_F531_D0.5020.29
459_P513_P0.5020.29
88_V311_F0.5020.29
312_L333_H0.5010.29
445_M482_L0.5010.29
44_L403_W0.5010.29
52_I292_T0.5000.29
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
4r0cA 3 0.7922 99.8 0.877 Contact Map
4r1iA 2 0.8135 99.8 0.88 Contact Map
4f35D 2 0.7069 99.7 0.888 Contact Map
3qe7A 2 0.4458 10.6 0.983 Contact Map
3qnqA 2 0.4956 8.5 0.984 Contact Map
2m20A 2 0.0924 5 0.986 Contact Map
3d31C 2 0.3552 4.8 0.986 Contact Map
4oj2X 3 0.3464 4.4 0.986 Contact Map
1j4nA 4 0.3677 4.3 0.986 Contact Map
2m67A 1 0.1385 4.2 0.986 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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