ALBA - BACSU - GREMLIN Contacts

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ALBA - Antilisterial bacteriocin subtilosin biosynthesis protein AlbA

UniProt:	P71011	Sequences: MFIEQMFPFINESVRVHQLPEGGVLEIDYLRDNVSISDFEYLDLNKTAYELCMRMDGQKTAEQILAEQCAVYDESPEDHKDWYYDMLNMLQNKQVIQLGNRASRHTITTSGSNEFPMPLHATFELTHRCNLKCAHCYLESSPEALGTVSIEQFKKTADMLFDNGVLTCEITGGEIFVHPNANEILDYVCKKFKKVAVLTNGTLMRKESLELLKTYKQKIIVGISLDSVNSEVHDSFRGRKGSFAQTCKTIKLLSDHGIFVRVAMSVFEKNMWEIHDMAQKVRDLGAKAFSYNWVDDFGRGRDIVHPTKDAEQHRKFMEYEQHVIDEFKDLIPIIPYERKRAANCGAGWKSIVISPFGEVRPCALFPKEFSLGNIFHDSYESIFNSPLVHKLWQAQAPRFSEHCMKDKCPFSGYCGGCYLKGLNSNKYHRKNICSWAKNEQLEDVVQLI	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	448 (381)
Sequences:	1761 (1460)
Seq/√Len:	74.8

ECOLI - ASLB YDEM MOAA
BACSU - ALBA SKFB MOAA
HALSA - Q9HQF5 MOAA
SULSO - Q97XZ2 Q97XS7 Q97XA7 Q97XS8 Q7LXV3 Q97XA6 Q97Y04 Q97WK5 MOAA Q97WC3

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
131_L	202_T	6.100	1.00
206_K	252_L	5.730	1.00
234_D	241_G	5.294	1.00
229_N	244_A	4.366	1.00
230_S	244_A	4.337	1.00
205_R	208_S	4.271	1.00
358_E	373_N	4.242	1.00
152_Q	375_F	3.819	1.00
150_I	183_E	3.803	1.00
149_S	152_Q	3.558	1.00
130_N	200_N	3.520	1.00
210_E	256_H	3.455	1.00
148_V	152_Q	3.007	1.00
233_H	242_S	2.771	1.00
243_F	280_K	2.661	1.00
358_E	370_S	2.648	1.00
228_V	232_V	2.499	1.00
373_N	376_H	2.423	1.00
128_R	147_T	2.407	1.00
354_S	358_E	2.368	1.00
183_E	186_D	2.340	1.00
236_F	267_F	2.333	1.00
251_K	284_L	2.319	1.00
154_K	187_Y	2.313	1.00
153_F	184_I	2.303	1.00
226_D	237_R	2.301	1.00
211_L	215_Y	2.277	1.00
344_C	362_C	2.261	1.00
158_D	187_Y	2.238	1.00
319_Y	322_H	2.230	1.00
210_E	214_T	2.228	1.00
185_L	188_V	2.203	1.00
171_T	363_A	2.202	1.00
148_V	153_F	2.147	1.00
182_N	211_L	2.129	1.00
402_H	430_K	2.092	1.00
209_L	253_L	2.077	1.00
155_K	375_F	2.075	1.00
160_L	168_C	2.074	1.00
369_F	422_L	2.057	1.00
201_G	223_I	2.051	1.00
362_C	417_C	2.043	1.00
189_C	215_Y	2.038	1.00
227_S	237_R	2.022	1.00
221_V	253_L	2.014	1.00
125_L	181_A	2.014	1.00
209_L	252_L	2.000	1.00
179_P	208_S	1.999	1.00
146_G	356_F	1.868	1.00
326_E	329_D	1.855	1.00
186_D	211_L	1.848	1.00
224_S	265_S	1.847	1.00
154_K	183_E	1.839	1.00
121_A	160_L	1.810	1.00
235_S	269_K	1.804	1.00
344_C	417_C	1.774	1.00
327_F	331_I	1.766	1.00
170_I	195_V	1.757	1.00
150_I	154_K	1.733	1.00
130_N	203_L	1.728	1.00
155_K	159_M	1.720	1.00
171_T	198_L	1.703	1.00
327_F	330_L	1.670	1.00
135_H	226_D	1.654	1.00
262_V	281_V	1.635	1.00
186_D	190_K	1.629	1.00
44_L	48_A	1.620	1.00
62_E	66_A	1.615	1.00
232_V	273_E	1.597	0.99
247_C	284_L	1.592	0.99
138_L	265_S	1.592	0.99
225_L	262_V	1.581	0.99
51_L	64_I	1.556	0.99
147_T	178_H	1.539	0.99
138_L	224_S	1.517	0.99
252_L	255_D	1.515	0.99
229_N	234_D	1.510	0.99
328_K	331_I	1.487	0.99
227_S	243_F	1.485	0.99
403_C	408_C	1.468	0.99
222_G	263_A	1.468	0.99
69_C	74_E	1.464	0.99
208_S	212_L	1.459	0.99
403_C	414_C	1.458	0.99
54_R	64_I	1.451	0.99
273_E	276_D	1.448	0.99
176_F	197_V	1.430	0.99
135_H	171_T	1.403	0.99
127_H	355_P	1.389	0.99
251_K	255_D	1.387	0.98
322_H	326_E	1.386	0.98
63_Q	67_E	1.384	0.98
176_F	203_L	1.383	0.98
225_L	280_K	1.381	0.98
326_E	330_L	1.377	0.98
202_T	245_Q	1.375	0.98
211_L	214_T	1.367	0.98
209_L	213_K	1.362	0.98
179_P	182_N	1.360	0.98
135_H	198_L	1.349	0.98
268_E	312_Q	1.348	0.98
44_L	47_T	1.344	0.98
202_T	241_G	1.342	0.98
245_Q	248_K	1.335	0.98
185_L	211_L	1.318	0.98
60_T	63_Q	1.317	0.98
189_C	214_T	1.316	0.98
408_C	414_C	1.304	0.98
171_T	263_A	1.300	0.98
206_K	210_E	1.280	0.97
46_K	50_E	1.276	0.97
251_K	283_D	1.266	0.97
88_N	92_N	1.264	0.97
206_K	209_L	1.255	0.97
123_F	153_F	1.238	0.97
247_C	251_K	1.238	0.97
213_K	256_H	1.234	0.97
121_A	353_I	1.232	0.97
250_I	262_V	1.230	0.97
174_E	200_N	1.226	0.97
246_T	249_T	1.222	0.97
180_N	183_E	1.220	0.97
367_K	370_S	1.217	0.97
60_T	64_I	1.217	0.97
418_Y	421_G	1.212	0.96
242_S	246_T	1.203	0.96
280_K	284_L	1.187	0.96
325_D	331_I	1.185	0.96
130_N	174_E	1.183	0.96
185_L	195_V	1.179	0.96
154_K	158_D	1.170	0.96
224_S	347_G	1.166	0.96
353_I	359_V	1.162	0.95
248_K	252_L	1.162	0.95
354_S	360_R	1.160	0.95
187_Y	190_K	1.146	0.95
159_M	359_V	1.144	0.95
365_F	419_L	1.134	0.95
153_F	178_H	1.125	0.95
265_S	363_A	1.122	0.95
225_L	247_C	1.116	0.94
209_L	221_V	1.115	0.94
262_V	289_F	1.112	0.94
384_N	387_L	1.109	0.94
176_F	249_T	1.103	0.94
247_C	280_K	1.101	0.94
169_E	363_A	1.098	0.94
47_T	50_E	1.097	0.94
185_L	215_Y	1.095	0.94
230_S	234_D	1.092	0.94
65_L	72_Y	1.082	0.93
277_M	281_V	1.082	0.93
50_E	72_Y	1.081	0.93
131_L	242_S	1.081	0.93
204_M	253_L	1.080	0.93
157_A	170_I	1.080	0.93
66_A	70_A	1.079	0.93
347_G	361_P	1.078	0.93
198_L	363_A	1.075	0.93
126_T	147_T	1.062	0.93
57_G	64_I	1.059	0.93
156_T	353_I	1.059	0.93
201_G	250_I	1.042	0.92
170_I	184_I	1.042	0.92
314_R	318_E	1.036	0.92
326_E	331_I	1.030	0.92
224_S	363_A	1.028	0.91
49_Y	52_C	1.025	0.91
53_M	69_C	1.015	0.91
225_L	289_F	1.013	0.91
176_F	208_S	1.010	0.91
124_E	127_H	1.008	0.91
309_D	312_Q	1.007	0.91
245_Q	249_T	1.002	0.90
229_N	232_V	1.001	0.90
207_E	210_E	0.999	0.90
328_K	333_I	0.998	0.90
332_P	335_P	0.998	0.90
271_M	312_Q	0.996	0.90
327_F	333_I	0.990	0.90
135_H	236_F	0.987	0.90
403_C	433_C	0.985	0.90
228_V	273_E	0.982	0.90
126_T	178_H	0.978	0.89
279_Q	327_F	0.976	0.89
121_A	351_I	0.972	0.89
70_A	73_D	0.967	0.89
421_G	425_N	0.965	0.89
130_N	202_T	0.962	0.89
227_S	238_G	0.957	0.88
280_K	283_D	0.954	0.88
198_L	364_L	0.952	0.88
69_C	72_Y	0.945	0.88
315_K	319_Y	0.945	0.88
263_A	363_A	0.943	0.88
408_C	433_C	0.940	0.87
135_H	263_A	0.940	0.87
168_C	188_V	0.933	0.87
248_K	251_K	0.932	0.87
120_H	169_E	0.932	0.87
50_E	54_R	0.931	0.87
54_R	68_Q	0.929	0.87
238_G	241_G	0.927	0.87
56_D	60_T	0.927	0.87
183_E	187_Y	0.925	0.87
372_G	377_D	0.921	0.86
47_T	53_M	0.921	0.86
52_C	60_T	0.917	0.86
331_I	334_I	0.915	0.86
54_R	67_E	0.912	0.86
67_E	70_A	0.909	0.86
46_K	64_I	0.907	0.85
271_M	308_K	0.906	0.85
103_S	404_M	0.904	0.85
124_E	352_V	0.899	0.85
61_A	64_I	0.899	0.85
233_H	246_T	0.894	0.85
397_P	411_S	0.894	0.85
233_H	237_R	0.894	0.85
179_P	211_L	0.891	0.84
54_R	57_G	0.890	0.84
64_I	68_Q	0.884	0.84
113_N	384_N	0.883	0.84
49_Y	53_M	0.882	0.84
225_L	250_I	0.880	0.84
313_H	317_M	0.879	0.84
224_S	263_A	0.876	0.83
359_V	382_I	0.875	0.83
176_F	243_F	0.875	0.83
138_L	263_A	0.874	0.83
53_M	56_D	0.873	0.83
268_E	309_D	0.863	0.82
51_L	54_R	0.862	0.82
188_V	195_V	0.860	0.82
48_A	52_C	0.856	0.82
401_E	404_M	0.853	0.82
55_M	60_T	0.851	0.82
64_I	67_E	0.850	0.81
234_D	242_S	0.849	0.81
361_P	365_F	0.847	0.81
65_L	73_D	0.841	0.81
198_L	263_A	0.838	0.81
124_E	171_T	0.827	0.80
44_L	52_C	0.826	0.80
148_V	156_T	0.823	0.79
124_E	366_P	0.822	0.79
212_L	253_L	0.820	0.79
184_I	188_V	0.820	0.79
209_L	249_T	0.816	0.79
309_D	435_W	0.816	0.79
140_S	299_R	0.810	0.78
64_I	72_Y	0.810	0.78
122_T	169_E	0.810	0.78
52_C	55_M	0.809	0.78
135_H	242_S	0.808	0.78
77_E	80_K	0.804	0.78
56_D	91_Q	0.804	0.78
53_M	57_G	0.802	0.78
416_G	421_G	0.788	0.76
206_K	248_K	0.786	0.76
88_N	91_Q	0.785	0.76
170_I	222_G	0.781	0.76
327_F	334_I	0.778	0.75
74_E	77_E	0.777	0.75
185_L	189_C	0.777	0.75
138_L	171_T	0.776	0.75
48_A	55_M	0.775	0.75
66_A	92_N	0.775	0.75
133_C	136_C	0.774	0.75
135_H	138_L	0.772	0.75
396_A	400_S	0.771	0.75
328_K	334_I	0.769	0.75
152_Q	156_T	0.769	0.75
320_E	324_I	0.768	0.74
350_S	363_A	0.768	0.74
414_C	433_C	0.767	0.74
130_N	241_G	0.767	0.74
65_L	71_V	0.765	0.74
186_D	215_Y	0.765	0.74
244_A	248_K	0.762	0.74
83_Y	88_N	0.761	0.74
328_K	335_P	0.760	0.74
352_V	363_A	0.759	0.74
66_A	69_C	0.759	0.74
225_L	243_F	0.757	0.73
65_L	80_K	0.757	0.73
414_C	417_C	0.756	0.73
223_I	246_T	0.753	0.73
169_E	198_L	0.751	0.73
264_M	281_V	0.749	0.73
227_S	242_S	0.747	0.72
67_E	71_V	0.746	0.72
89_M	93_K	0.746	0.72
276_D	279_Q	0.744	0.72
200_N	237_R	0.743	0.72
61_A	65_L	0.742	0.72
174_E	227_S	0.741	0.72
57_G	60_T	0.741	0.72
385_S	388_V	0.739	0.72
51_L	55_M	0.735	0.71
148_V	159_M	0.733	0.71
44_L	55_M	0.733	0.71
137_Y	171_T	0.733	0.71
153_F	170_I	0.732	0.71
57_G	63_Q	0.731	0.71
204_M	249_T	0.731	0.71
108_T	112_S	0.726	0.70
52_C	61_A	0.725	0.70
362_C	408_C	0.721	0.70
344_C	408_C	0.719	0.70
122_T	135_H	0.718	0.69
137_Y	265_S	0.718	0.69
47_T	54_R	0.717	0.69
345_G	363_A	0.715	0.69
402_H	407_K	0.715	0.69
227_S	233_H	0.714	0.69
204_M	252_L	0.714	0.69
346_A	418_Y	0.714	0.69
51_L	62_E	0.711	0.69
52_C	197_V	0.711	0.69
47_T	56_D	0.710	0.69
131_L	237_R	0.708	0.68
203_L	249_T	0.708	0.68
152_Q	155_K	0.703	0.68
389_H	392_W	0.703	0.68
429_R	432_I	0.701	0.68
55_M	66_A	0.700	0.67
353_I	374_I	0.698	0.67
315_K	318_E	0.698	0.67
319_Y	323_V	0.697	0.67
351_I	359_V	0.697	0.67
308_K	312_Q	0.695	0.67
170_I	185_L	0.693	0.67
354_S	366_P	0.693	0.67
121_A	359_V	0.692	0.67
64_I	73_D	0.691	0.66
50_E	53_M	0.687	0.66
74_E	80_K	0.683	0.66
52_C	56_D	0.683	0.66
72_Y	79_H	0.683	0.66
297_F	300_G	0.682	0.65
137_Y	363_A	0.682	0.65
135_H	246_T	0.681	0.65
265_S	347_G	0.680	0.65
275_H	278_A	0.678	0.65
123_F	148_V	0.677	0.65
177_V	240_K	0.677	0.65
44_L	50_E	0.676	0.65
200_N	241_G	0.676	0.65
137_Y	364_L	0.675	0.65
51_L	72_Y	0.675	0.65
64_I	70_A	0.674	0.65
325_D	330_L	0.674	0.65
44_L	56_D	0.674	0.65
278_A	282_R	0.674	0.65
64_I	71_V	0.673	0.64
204_M	221_V	0.673	0.64
201_G	348_W	0.672	0.64
267_F	294_V	0.672	0.64
171_T	265_S	0.669	0.64
57_G	62_E	0.665	0.63
361_P	419_L	0.664	0.63
46_K	63_Q	0.662	0.63
237_R	241_G	0.658	0.63
204_M	208_S	0.657	0.63
328_K	332_P	0.656	0.62
310_A	434_S	0.656	0.62
45_N	52_C	0.656	0.62
181_A	197_V	0.656	0.62
84_Y	87_L	0.655	0.62
51_L	71_V	0.654	0.62
45_N	48_A	0.650	0.62
46_K	54_R	0.649	0.62
56_D	66_A	0.648	0.61
306_P	310_A	0.647	0.61
138_L	363_A	0.646	0.61
279_Q	282_R	0.646	0.61
210_E	252_L	0.645	0.61
55_M	65_L	0.645	0.61
49_Y	57_G	0.645	0.61
161_F	191_K	0.645	0.61
224_S	361_P	0.645	0.61
170_I	188_V	0.644	0.61
129_C	136_C	0.640	0.61
125_L	170_I	0.639	0.60
52_C	66_A	0.639	0.60
129_C	133_C	0.638	0.60
138_L	222_G	0.637	0.60
135_H	363_A	0.636	0.60
46_K	61_A	0.635	0.60
93_K	157_A	0.634	0.60
270_N	437_K	0.633	0.60
64_I	69_C	0.633	0.60
234_D	237_R	0.632	0.60
60_T	69_C	0.632	0.60
62_E	71_V	0.630	0.59
213_K	257_G	0.630	0.59
209_L	256_H	0.629	0.59
60_T	65_L	0.629	0.59
312_Q	315_K	0.628	0.59
50_E	55_M	0.628	0.59
404_M	407_K	0.627	0.59
47_T	64_I	0.626	0.59
225_L	233_H	0.626	0.59
203_L	209_L	0.625	0.59
311_E	314_R	0.625	0.59
330_L	335_P	0.624	0.59
62_E	67_E	0.624	0.59
65_L	69_C	0.624	0.59
197_V	221_V	0.623	0.58
150_I	186_D	0.623	0.58
233_H	241_G	0.623	0.58
138_L	267_F	0.619	0.58
289_F	294_V	0.615	0.58
376_H	393_Q	0.614	0.57
171_T	364_L	0.614	0.57
212_L	221_V	0.614	0.57
48_A	56_D	0.612	0.57
189_C	216_K	0.611	0.57
210_E	213_K	0.611	0.57
67_E	73_D	0.610	0.57
431_N	436_A	0.610	0.57
48_A	51_L	0.610	0.57
128_R	132_K	0.609	0.57
213_K	216_K	0.609	0.57
200_N	362_C	0.609	0.57
158_D	161_F	0.607	0.57
210_E	255_D	0.607	0.57
383_F	392_W	0.605	0.56
52_C	68_Q	0.605	0.56
361_P	369_F	0.603	0.56
123_F	185_L	0.603	0.56
61_A	66_A	0.602	0.56
57_G	87_L	0.602	0.56
226_D	265_S	0.601	0.56
131_L	226_D	0.601	0.56
365_F	369_F	0.601	0.56
51_L	61_A	0.598	0.55
311_E	318_E	0.596	0.55
94_Q	103_S	0.596	0.55
176_F	233_H	0.595	0.55
223_I	250_I	0.595	0.55
221_V	258_I	0.595	0.55
50_E	71_V	0.594	0.55
128_R	178_H	0.594	0.55
122_T	171_T	0.594	0.55
209_L	212_L	0.593	0.55
206_K	256_H	0.593	0.55
268_E	302_D	0.593	0.55
124_E	135_H	0.591	0.55
357_G	373_N	0.590	0.54
351_I	383_F	0.589	0.54
108_T	111_G	0.588	0.54
374_I	388_V	0.585	0.54
109_T	112_S	0.585	0.54
274_I	278_A	0.583	0.54
171_T	178_H	0.582	0.53
124_E	265_S	0.581	0.53
222_G	265_S	0.580	0.53
237_R	243_F	0.580	0.53
47_T	57_G	0.578	0.53
47_T	51_L	0.577	0.53
275_H	319_Y	0.576	0.53
153_F	157_A	0.575	0.53
390_K	393_Q	0.573	0.52
352_V	366_P	0.573	0.52
387_L	391_L	0.572	0.52
49_Y	72_Y	0.572	0.52
46_K	66_A	0.571	0.52
51_L	68_Q	0.571	0.52
46_K	56_D	0.569	0.52
71_V	254_S	0.569	0.52
296_D	299_R	0.568	0.52
46_K	53_M	0.567	0.52
124_E	365_F	0.566	0.51
122_T	363_A	0.566	0.51
200_N	227_S	0.566	0.51
62_E	68_Q	0.565	0.51
138_L	364_L	0.565	0.51
125_L	153_F	0.565	0.51
127_H	354_S	0.564	0.51
403_C	417_C	0.564	0.51
139_E	142_P	0.562	0.51
263_A	293_W	0.562	0.51
138_L	141_S	0.559	0.51
421_G	430_K	0.559	0.51
386_P	390_K	0.558	0.50
66_A	73_D	0.556	0.50
157_A	184_I	0.555	0.50
80_K	84_Y	0.555	0.50
56_D	83_Y	0.555	0.50
179_P	212_L	0.554	0.50
44_L	49_Y	0.553	0.50
386_P	389_H	0.553	0.50
138_L	361_P	0.553	0.50
223_I	281_V	0.550	0.49
168_C	195_V	0.550	0.49
63_Q	70_A	0.550	0.49
48_A	54_R	0.550	0.49
142_P	146_G	0.550	0.49
157_A	168_C	0.549	0.49
56_D	70_A	0.549	0.49
160_L	365_F	0.548	0.49
47_T	72_Y	0.547	0.49
111_G	114_E	0.547	0.49
325_D	328_K	0.547	0.49
292_N	295_D	0.546	0.49
124_E	263_A	0.545	0.49
233_H	372_G	0.543	0.49
132_K	241_G	0.543	0.49
90_L	96_I	0.542	0.48
227_S	263_A	0.541	0.48
135_H	159_M	0.541	0.48
70_A	74_E	0.539	0.48
364_L	418_Y	0.538	0.48
263_A	292_N	0.538	0.48
157_A	193_K	0.538	0.48
160_L	166_L	0.537	0.48
47_T	61_A	0.535	0.48
73_D	77_E	0.534	0.47
49_Y	62_E	0.534	0.47
209_L	216_K	0.533	0.47
358_E	367_K	0.533	0.47
181_A	185_L	0.533	0.47
342_A	345_G	0.532	0.47
327_F	332_P	0.531	0.47
97_Q	102_A	0.530	0.47
377_D	382_I	0.530	0.47
65_L	77_E	0.529	0.47
407_K	427_Y	0.527	0.47
172_G	414_C	0.526	0.46
275_H	323_V	0.525	0.46
317_M	321_Q	0.525	0.46
138_L	369_F	0.524	0.46
49_Y	60_T	0.524	0.46
131_L	227_S	0.523	0.46
255_D	283_D	0.522	0.46
138_L	352_V	0.520	0.46
196_A	222_G	0.520	0.46
52_C	95_V	0.520	0.46
69_C	73_D	0.518	0.45
83_Y	87_L	0.518	0.45
134_A	236_F	0.517	0.45
345_G	397_P	0.517	0.45
204_M	209_L	0.517	0.45
119_L	349_K	0.516	0.45
123_F	377_D	0.516	0.45
371_L	377_D	0.516	0.45
124_E	138_L	0.516	0.45
118_P	121_A	0.515	0.45
169_E	364_L	0.515	0.45
224_S	246_T	0.514	0.45
83_Y	86_M	0.514	0.45
109_T	113_N	0.514	0.45
151_E	322_H	0.514	0.45
48_A	82_W	0.513	0.45
197_V	212_L	0.513	0.45
51_L	57_G	0.512	0.45
409_P	437_K	0.511	0.45
198_L	222_G	0.511	0.45
262_V	286_A	0.508	0.44
137_Y	263_A	0.508	0.44
281_V	323_V	0.508	0.44
383_F	386_P	0.507	0.44
103_S	107_I	0.506	0.44
350_S	364_L	0.505	0.44
314_R	438_N	0.505	0.44
62_E	70_A	0.504	0.44
101_R	283_D	0.502	0.43
56_D	61_A	0.502	0.43
150_I	180_N	0.501	0.43
396_A	418_Y	0.500	0.43

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4k36A	1	0.7277	100	0.449	Contact Map
1tv8A	2	0.6585	100	0.593	Contact Map
4m7tA	1	0.529	100	0.595	Contact Map
4rtbA	2	0.8371	100	0.619	Contact Map
4wcxA	1	0.8772	100	0.657	Contact Map
3c8fA	1	0.5022	100	0.679	Contact Map
2yx0A	1	0.6496	100	0.701	Contact Map
2qgqA	1	0.5357	100	0.71	Contact Map
2z2uA	1	0.5558	100	0.712	Contact Map
3t7vA	1	0.7232	100	0.717	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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