MURA1 - BACSU - GREMLIN Contacts

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MURA1 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1

UniProt:	P70965	Sequences: MEKIIVRGGQKLNGTVKVEGAKNAVLPVIAASLLASEEKSVICDVPTLSDVYTINEVLRHLGADVHFENNEVTVNASYALQTEAPFEYVRKMRASVLVMGPLLARTGHARVALPGGCAIGSRPIDQHLKGFEAMGAEIKVGNGFIEAEVKGRLQGAKIYLDFPSVGATENLIMAAALAEGTTTLENVAKEPEIVDLANYINGMGGKIRGAGTGTIKIEGVEKLHGVKHHIIPDRIEAGTFMVAAAITEGNVLVKGAVPEHLTSLIAKMEEMGVTIKDEGEGLRVIGPKELKPIDIKTMPHPGFPTDMQSQMMALLLRASGTSMITETVFENRFMHAEEFRRMNGDIKIEGRSVIINGPVQLQGAEVAATDLRAGAALILAGLVAEGHTRVTELKHLDRGYVDFHQKLAALGADIERVNDESASEQENKEVVSDLNA	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	436 (400)
Sequences:	7668 (4705)
Seq/√Len:	235.2

ECOLI - MURA AROA
BACSU - MURA1 MURA2 AROA
HALSA - AROA
SULSO - AROA

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
250_N	283_R	4.426	1.00
15_T	254_K	4.072	1.00
345_D	356_N	3.758	1.00
43_C	227_K	3.421	1.00
252_L	283_R	3.380	1.00
250_N	285_I	3.160	1.00
181_T	218_E	3.140	1.00
157_K	185_E	3.115	1.00
402_D	405_Q	3.027	1.00
43_C	229_H	2.793	1.00
39_K	75_N	2.723	1.00
206_K	218_E	2.707	1.00
17_K	254_K	2.700	1.00
36_S	222_K	2.682	1.00
245_A	273_V	2.670	1.00
152_R	179_E	2.642	1.00
200_I	205_G	2.617	1.00
321_T	356_N	2.572	1.00
114_P	120_G	2.558	1.00
41_V	227_K	2.554	1.00
400_Y	406_K	2.495	1.00
367_A	391_T	2.493	1.00
289_E	319_S	2.463	1.00
246_I	379_L	2.458	1.00
274_T	285_I	2.429	1.00
338_E	341_R	2.368	1.00
47_T	52_Y	2.343	1.00
56_E	59_R	2.315	1.00
278_E	281_G	2.283	1.00
365_E	391_T	2.271	1.00
159_Y	185_E	2.271	1.00
242_V	314_L	2.263	1.00
251_V	410_L	2.261	1.00
66_H	73_T	2.231	1.00
41_V	73_T	2.192	1.00
365_E	389_R	2.182	1.00
39_K	73_T	2.177	1.00
157_K	183_T	2.137	1.00
43_C	71_E	2.135	1.00
349_E	352_S	2.130	1.00
164_S	167_A	2.120	1.00
360_Q	385_E	2.104	1.00
130_G	171_L	2.096	1.00
317_R	383_V	2.048	1.00
381_G	388_T	2.034	1.00
47_T	67_F	2.010	1.00
41_V	71_E	2.005	1.00
181_T	216_K	1.997	1.00
13_N	250_N	1.995	1.00
294_D	325_T	1.939	1.00
338_E	377_L	1.937	1.00
172_I	197_A	1.887	1.00
32_S	40_S	1.882	1.00
323_M	354_I	1.837	1.00
64_D	75_N	1.811	1.00
125_D	129_K	1.773	1.00
137_E	150_K	1.772	1.00
344_G	361_L	1.765	1.00
35_A	38_E	1.710	1.00
276_K	283_R	1.706	1.00
25_V	45_V	1.704	1.00
30_A	54_I	1.698	1.00
252_L	281_G	1.696	1.00
291_K	319_S	1.694	1.00
155_G	178_A	1.689	1.00
55_N	72_V	1.670	1.00
7_R	387_H	1.668	1.00
252_L	278_E	1.665	1.00
347_K	354_I	1.657	1.00
313_A	376_A	1.650	1.00
339_F	344_G	1.633	1.00
342_M	388_T	1.607	1.00
321_T	354_I	1.595	1.00
129_K	133_A	1.590	1.00
347_K	356_N	1.589	1.00
183_T	216_K	1.576	1.00
238_G	307_M	1.574	1.00
205_G	223_L	1.573	1.00
108_H	148_E	1.562	1.00
278_E	283_R	1.554	1.00
185_E	214_T	1.543	1.00
342_M	364_A	1.525	1.00
336_A	346_I	1.521	1.00
38_E	225_G	1.511	1.00
55_N	65_V	1.509	1.00
183_T	214_T	1.500	1.00
378_I	403_F	1.499	1.00
28_V	199_Y	1.496	1.00
201_N	210_A	1.493	1.00
241_M	265_I	1.491	1.00
154_Q	179_E	1.487	1.00
67_F	72_V	1.472	1.00
208_R	218_E	1.464	1.00
110_R	146_E	1.457	1.00
85_P	88_Y	1.436	1.00
139_K	148_E	1.431	1.00
29_I	58_L	1.422	1.00
294_D	323_M	1.421	1.00
210_A	215_I	1.418	1.00
407_L	412_A	1.417	1.00
366_V	377_L	1.404	1.00
101_P	170_N	1.399	1.00
15_T	252_L	1.395	1.00
312_M	335_H	1.378	1.00
96_V	145_I	1.368	1.00
59_R	65_V	1.367	1.00
336_A	348_I	1.361	1.00
118_A	121_S	1.357	1.00
266_A	269_E	1.352	1.00
203_M	226_V	1.347	1.00
292_P	321_T	1.346	1.00
231_I	260_H	1.332	1.00
327_T	331_N	1.328	1.00
316_L	344_G	1.322	1.00
16_V	410_L	1.319	1.00
315_L	322_S	1.309	1.00
292_P	322_S	1.306	1.00
320_G	357_G	1.306	1.00
128_L	140_V	1.301	1.00
312_M	324_I	1.299	1.00
92_M	95_S	1.289	1.00
241_M	253_V	1.283	1.00
18_V	253_V	1.278	1.00
195_D	228_H	1.274	1.00
97_L	169_E	1.269	1.00
367_A	392_E	1.268	1.00
243_A	382_L	1.268	1.00
237_A	256_A	1.262	1.00
52_Y	67_F	1.260	1.00
63_A	74_V	1.255	1.00
83_E	110_R	1.252	1.00
349_E	354_I	1.249	1.00
242_V	264_L	1.244	1.00
29_I	55_N	1.239	1.00
342_M	380_A	1.231	1.00
66_H	75_N	1.230	1.00
271_M	293_I	1.227	1.00
336_A	353_V	1.224	1.00
201_N	206_K	1.223	1.00
42_I	230_I	1.221	1.00
268_M	273_V	1.220	1.00
56_E	60_H	1.213	1.00
35_A	40_S	1.210	1.00
276_K	285_I	1.210	1.00
406_K	409_A	1.209	1.00
28_V	230_I	1.205	1.00
17_K	255_G	1.205	1.00
45_V	51_V	1.193	1.00
297_T	326_E	1.190	1.00
138_I	147_A	1.190	1.00
208_R	216_K	1.190	1.00
241_M	268_M	1.185	1.00
184_L	187_V	1.174	1.00
25_V	51_V	1.162	1.00
110_R	148_E	1.161	1.00
179_E	221_E	1.159	1.00
132_E	137_E	1.155	1.00
139_K	150_K	1.147	1.00
381_G	390_V	1.137	1.00
40_S	199_Y	1.135	1.00
346_I	353_V	1.134	1.00
136_A	153_L	1.126	1.00
42_I	74_V	1.124	1.00
374_G	396_L	1.121	1.00
317_R	358_P	1.107	1.00
254_K	281_G	1.105	1.00
57_V	88_Y	1.103	1.00
134_M	156_A	1.097	1.00
268_M	314_L	1.094	1.00
189_K	213_G	1.093	1.00
38_E	224_H	1.091	1.00
172_I	217_I	1.090	1.00
246_I	383_V	1.089	1.00
26_L	54_I	1.084	1.00
175_A	182_T	1.084	1.00
243_A	379_L	1.083	1.00
344_G	358_P	1.077	1.00
402_D	406_K	1.071	1.00
202_G	226_V	1.068	1.00
197_A	207_I	1.064	1.00
59_R	64_D	1.063	1.00
32_S	74_V	1.059	1.00
241_M	284_V	1.049	1.00
57_V	89_V	1.049	1.00
366_V	388_T	1.037	1.00
374_G	395_H	1.033	1.00
239_T	375_A	1.033	1.00
209_G	212_T	1.031	1.00
137_E	148_E	1.028	1.00
258_P	277_D	1.027	1.00
63_A	76_A	1.018	1.00
140_V	143_G	1.018	1.00
257_V	260_H	1.017	1.00
53_T	56_E	1.017	1.00
40_S	226_V	1.016	1.00
267_K	295_I	1.014	1.00
53_T	90_R	1.011	1.00
129_K	132_E	1.010	1.00
271_M	318_A	1.010	1.00
158_I	161_D	1.009	1.00
245_A	288_K	1.007	1.00
321_T	357_G	1.006	1.00
313_A	380_A	1.004	1.00
180_G	219_G	1.002	1.00
7_R	10_Q	1.001	1.00
269_E	277_D	0.998	1.00
267_K	311_M	0.998	1.00
110_R	150_K	0.992	1.00
242_V	307_M	0.992	1.00
197_A	210_A	0.991	1.00
333_F	353_V	0.990	1.00
169_E	196_L	0.990	1.00
128_L	132_E	0.987	1.00
35_A	225_G	0.981	1.00
362_Q	385_E	0.980	1.00
240_F	400_Y	0.979	1.00
149_V	152_R	0.975	1.00
267_K	270_E	0.965	1.00
242_V	268_M	0.963	1.00
296_K	326_E	0.962	1.00
153_L	178_A	0.961	1.00
236_E	406_K	0.960	1.00
12_L	243_A	0.958	1.00
315_L	324_I	0.957	1.00
405_Q	408_A	0.956	1.00
384_A	388_T	0.950	1.00
68_E	71_E	0.949	1.00
108_H	146_E	0.945	1.00
238_G	310_Q	0.936	1.00
28_V	42_I	0.933	1.00
59_R	67_F	0.932	1.00
364_A	388_T	0.931	1.00
126_Q	162_F	0.930	1.00
286_G	290_L	0.927	1.00
392_E	395_H	0.925	1.00
307_M	310_Q	0.923	1.00
58_L	63_A	0.921	1.00
186_N	191_P	0.919	1.00
160_L	171_L	0.914	1.00
341_R	364_A	0.903	1.00
228_H	231_I	0.903	1.00
49_S	397_D	0.901	1.00
45_V	72_V	0.900	1.00
234_R	264_L	0.893	0.99
55_N	59_R	0.892	0.99
340_R	345_D	0.891	0.99
27_P	30_A	0.890	0.99
382_L	412_A	0.884	0.99
269_E	274_T	0.879	0.99
127_H	170_N	0.878	0.99
199_Y	203_M	0.877	0.99
44_D	229_H	0.874	0.99
176_A	205_G	0.872	0.99
292_P	318_A	0.871	0.99
292_P	320_G	0.871	0.99
369_T	392_E	0.871	0.99
290_L	318_A	0.863	0.99
368_A	374_G	0.859	0.99
324_I	353_V	0.858	0.99
117_C	371_L	0.854	0.99
271_M	290_L	0.853	0.99
101_P	173_M	0.850	0.99
12_L	249_G	0.848	0.99
201_N	209_G	0.843	0.99
318_A	322_S	0.838	0.99
39_K	76_A	0.837	0.99
83_E	88_Y	0.837	0.99
229_H	255_G	0.829	0.99
210_A	214_T	0.828	0.99
129_K	161_D	0.826	0.99
103_L	136_A	0.824	0.99
335_H	373_A	0.824	0.99
161_D	267_K	0.823	0.99
277_D	282_L	0.821	0.99
30_A	102_L	0.820	0.99
244_A	247_T	0.818	0.99
34_L	102_L	0.818	0.99
192_E	234_R	0.814	0.99
155_G	179_E	0.813	0.99
316_L	358_P	0.813	0.99
312_M	353_V	0.812	0.99
317_R	359_V	0.812	0.99
187_V	190_E	0.811	0.99
18_V	237_A	0.809	0.99
36_S	39_K	0.809	0.99
381_G	407_L	0.804	0.99
241_M	244_A	0.803	0.99
202_G	228_H	0.800	0.99
128_L	138_I	0.798	0.99
81_Q	85_P	0.795	0.99
248_E	287_P	0.794	0.99
67_F	70_N	0.789	0.99
201_N	207_I	0.788	0.99
16_V	253_V	0.787	0.99
200_I	223_L	0.782	0.99
18_V	240_F	0.780	0.99
325_T	349_E	0.778	0.99
119_I	330_E	0.778	0.99
368_A	390_V	0.778	0.99
248_E	286_G	0.776	0.99
33_L	58_L	0.776	0.99
245_A	268_M	0.775	0.99
126_Q	161_D	0.775	0.99
55_N	74_V	0.774	0.99
246_I	313_A	0.774	0.99
96_V	124_I	0.774	0.99
275_I	284_V	0.772	0.98
38_E	76_A	0.768	0.98
310_Q	379_L	0.767	0.98
178_A	182_T	0.765	0.98
155_G	182_T	0.765	0.98
112_A	148_E	0.764	0.98
24_A	199_Y	0.763	0.98
393_L	396_L	0.762	0.98
55_N	67_F	0.761	0.98
181_T	219_G	0.761	0.98
25_V	230_I	0.759	0.98
176_A	223_L	0.757	0.98
245_A	284_V	0.757	0.98
243_A	412_A	0.755	0.98
273_V	290_L	0.754	0.98
312_M	355_I	0.753	0.98
19_E	406_K	0.752	0.98
198_N	202_G	0.751	0.98
199_Y	226_V	0.749	0.98
100_G	149_V	0.749	0.98
246_I	317_R	0.749	0.98
19_E	236_E	0.748	0.98
81_Q	84_A	0.747	0.98
265_I	269_E	0.746	0.98
348_I	352_S	0.746	0.98
70_N	401_V	0.746	0.98
189_K	192_E	0.744	0.98
82_T	86_F	0.743	0.98
186_N	190_E	0.741	0.98
44_D	255_G	0.738	0.98
89_V	119_I	0.737	0.98
271_M	314_L	0.735	0.98
267_K	293_I	0.730	0.98
29_I	74_V	0.730	0.98
293_I	322_S	0.727	0.98
397_D	404_H	0.727	0.98
59_R	66_H	0.727	0.98
187_V	191_P	0.724	0.98
49_S	53_T	0.724	0.98
171_L	184_L	0.723	0.98
175_A	184_L	0.723	0.98
378_I	396_L	0.719	0.98
113_L	145_I	0.718	0.98
29_I	72_V	0.717	0.98
264_L	307_M	0.714	0.97
363_G	388_T	0.714	0.97
271_M	315_L	0.714	0.97
21_A	25_V	0.713	0.97
31_A	199_Y	0.711	0.97
39_K	225_G	0.710	0.97
80_L	83_E	0.707	0.97
89_V	113_L	0.706	0.97
155_G	180_G	0.706	0.97
198_N	201_N	0.706	0.97
394_K	397_D	0.706	0.97
119_I	145_I	0.704	0.97
82_T	85_P	0.703	0.97
237_A	253_V	0.702	0.97
32_S	76_A	0.700	0.97
134_M	158_I	0.698	0.97
17_K	44_D	0.698	0.97
162_F	328_V	0.697	0.97
84_A	87_E	0.696	0.97
316_L	339_F	0.695	0.97
95_S	398_R	0.695	0.97
241_M	245_A	0.695	0.97
58_L	99_M	0.693	0.97
195_D	198_N	0.691	0.97
333_F	348_I	0.686	0.97
83_E	86_F	0.685	0.97
60_H	85_P	0.685	0.97
104_A	136_A	0.684	0.97
240_F	406_K	0.682	0.97
345_D	358_P	0.680	0.97
333_F	352_S	0.676	0.97
309_S	335_H	0.676	0.97
24_A	195_D	0.676	0.97
11_K	249_G	0.675	0.96
201_N	208_R	0.674	0.96
47_T	70_N	0.670	0.96
28_V	228_H	0.670	0.96
20_G	230_I	0.669	0.96
87_E	112_A	0.669	0.96
296_K	325_T	0.667	0.96
25_V	46_P	0.666	0.96
12_L	251_V	0.666	0.96
100_G	127_H	0.666	0.96
244_A	286_G	0.666	0.96
325_T	352_S	0.665	0.96
245_A	290_L	0.664	0.96
172_I	215_I	0.664	0.96
342_M	384_A	0.664	0.96
243_A	407_L	0.663	0.96
382_L	407_L	0.661	0.96
82_T	108_H	0.661	0.96
76_A	105_R	0.657	0.96
404_H	408_A	0.656	0.96
158_I	184_L	0.656	0.96
160_L	184_L	0.653	0.96
83_E	87_E	0.652	0.96
248_E	288_K	0.652	0.96
99_M	131_F	0.652	0.96
247_T	382_L	0.651	0.96
160_L	163_P	0.650	0.96
174_A	178_A	0.649	0.96
166_G	193_I	0.649	0.96
36_S	224_H	0.649	0.96
12_L	412_A	0.649	0.96
244_A	251_V	0.646	0.96
137_E	151_G	0.646	0.96
364_A	386_G	0.645	0.95
309_S	373_A	0.645	0.95
63_A	77_S	0.643	0.95
84_A	89_V	0.643	0.95
256_A	282_L	0.642	0.95
238_G	264_L	0.640	0.95
58_L	65_V	0.640	0.95
198_N	228_H	0.639	0.95
297_T	308_Q	0.638	0.95
24_A	27_P	0.636	0.95
97_L	166_G	0.634	0.95
258_P	282_L	0.632	0.95
14_G	410_L	0.632	0.95
277_D	281_G	0.630	0.95
122_R	372_R	0.629	0.95
192_E	195_D	0.627	0.95
332_R	370_D	0.627	0.95
100_G	113_L	0.626	0.95
316_L	359_V	0.626	0.95
81_Q	87_E	0.626	0.95
122_R	332_R	0.625	0.95
265_I	277_D	0.623	0.95
124_I	145_I	0.619	0.94
244_A	253_V	0.619	0.94
33_L	63_A	0.618	0.94
36_S	76_A	0.616	0.94
232_P	253_V	0.616	0.94
134_M	182_T	0.615	0.94
153_L	180_G	0.615	0.94
35_A	76_A	0.614	0.94
203_M	223_L	0.613	0.94
240_F	403_F	0.612	0.94
363_G	384_A	0.612	0.94
103_L	131_F	0.611	0.94
273_V	284_V	0.610	0.94
16_V	240_F	0.608	0.94
247_T	286_G	0.608	0.94
313_A	377_L	0.608	0.94
323_M	349_E	0.606	0.94
131_F	136_A	0.606	0.94
82_T	88_Y	0.604	0.94
89_V	95_S	0.604	0.94
182_T	219_G	0.604	0.94
124_I	128_L	0.604	0.94
209_G	213_G	0.603	0.94
126_Q	163_P	0.603	0.94
61_L	103_L	0.602	0.94
316_L	361_L	0.602	0.94
199_Y	228_H	0.601	0.93
103_L	111_V	0.601	0.93
269_E	275_I	0.600	0.93
242_V	310_Q	0.599	0.93
341_R	367_A	0.599	0.93
80_L	88_Y	0.598	0.93
246_I	314_L	0.597	0.93
270_E	299_P	0.596	0.93
125_D	143_G	0.596	0.93
396_L	404_H	0.594	0.93
16_V	406_K	0.594	0.93
378_I	404_H	0.592	0.93
206_K	220_V	0.592	0.93
89_V	96_V	0.591	0.93
132_E	138_I	0.590	0.93
312_M	336_A	0.589	0.93
175_A	200_I	0.586	0.93
26_L	30_A	0.586	0.93
68_E	73_T	0.586	0.93
274_T	287_P	0.585	0.93
126_Q	129_K	0.585	0.93
240_F	407_L	0.585	0.93
273_V	287_P	0.584	0.92
363_G	386_G	0.584	0.92
96_V	113_L	0.583	0.92
132_E	140_V	0.582	0.92
344_G	380_A	0.581	0.92
27_P	97_L	0.581	0.92
103_L	113_L	0.580	0.92
339_F	380_A	0.579	0.92
335_H	376_A	0.579	0.92
140_V	147_A	0.577	0.92
141_G	146_E	0.576	0.92
38_E	75_N	0.575	0.92
46_P	236_E	0.573	0.92
192_E	198_N	0.572	0.92
47_T	72_V	0.572	0.92
190_E	193_I	0.569	0.91
316_L	383_V	0.569	0.91
265_I	275_I	0.566	0.91
244_A	248_E	0.565	0.91
368_A	395_H	0.564	0.91
154_Q	180_G	0.564	0.91
286_G	289_E	0.562	0.91
324_I	355_I	0.562	0.91
363_G	381_G	0.561	0.91
295_I	311_M	0.560	0.91
141_G	144_F	0.559	0.91
322_S	355_I	0.559	0.91
117_C	121_S	0.559	0.91
244_A	249_G	0.558	0.91
239_T	310_Q	0.557	0.91
195_D	231_I	0.555	0.90
256_A	260_H	0.554	0.90
198_N	210_A	0.553	0.90
22_K	122_R	0.552	0.90
340_R	344_G	0.552	0.90
152_R	178_A	0.551	0.90
308_Q	333_F	0.551	0.90
194_V	209_G	0.550	0.90
8_G	11_K	0.548	0.90
308_Q	324_I	0.548	0.90
128_L	147_A	0.547	0.90
130_G	134_M	0.545	0.90
361_L	380_A	0.544	0.90
369_T	395_H	0.543	0.89
26_L	95_S	0.542	0.89
258_P	281_G	0.541	0.89
326_E	330_E	0.540	0.89
331_N	334_M	0.538	0.89
374_G	404_H	0.537	0.89
197_A	215_I	0.537	0.89
342_M	366_V	0.537	0.89
292_P	319_S	0.537	0.89
18_V	256_A	0.536	0.89
35_A	75_N	0.535	0.89
49_S	52_Y	0.534	0.89
311_M	314_L	0.534	0.89
57_V	98_V	0.534	0.89
43_C	70_N	0.533	0.89
40_S	225_G	0.532	0.89
201_N	205_G	0.531	0.88
84_A	88_Y	0.530	0.88
235_I	371_L	0.530	0.88
205_G	221_E	0.530	0.88
101_P	104_A	0.529	0.88
29_I	54_I	0.529	0.88
160_L	215_I	0.528	0.88
263_S	266_A	0.528	0.88
26_L	399_G	0.528	0.88
375_A	403_F	0.527	0.88
341_R	377_L	0.526	0.88
256_A	281_G	0.526	0.88
166_G	169_E	0.525	0.88
47_T	69_N	0.525	0.88
80_L	87_E	0.524	0.88
40_S	203_M	0.523	0.88
327_T	351_R	0.522	0.88
187_V	192_E	0.522	0.88
52_Y	56_E	0.520	0.87
315_L	355_I	0.520	0.87
342_M	361_L	0.520	0.87
176_A	220_V	0.519	0.87
21_A	231_I	0.519	0.87
340_R	346_I	0.515	0.87
38_E	226_V	0.514	0.87
266_A	270_E	0.514	0.87
275_I	282_L	0.514	0.87
317_R	361_L	0.514	0.87
127_H	130_G	0.513	0.87
57_V	99_M	0.513	0.87
333_F	336_A	0.511	0.86
393_L	404_H	0.511	0.86
194_V	198_N	0.511	0.86
86_F	365_E	0.510	0.86
296_K	327_T	0.510	0.86
190_E	209_G	0.510	0.86
206_K	221_E	0.508	0.86
267_K	300_H	0.508	0.86
153_L	174_A	0.508	0.86
313_A	316_L	0.506	0.86
218_E	221_E	0.505	0.86
61_L	82_T	0.505	0.86
54_I	399_G	0.505	0.86
97_L	329_F	0.504	0.86
337_E	340_R	0.504	0.86
91_K	116_G	0.504	0.86
313_A	339_F	0.503	0.86
126_Q	164_S	0.502	0.86
289_E	359_V	0.501	0.85
64_D	67_F	0.501	0.85
121_S	330_E	0.501	0.85
340_R	347_K	0.501	0.85
332_R	372_R	0.500	0.85
265_I	282_L	0.500	0.85
142_N	362_Q	0.500	0.85

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3rmtA	4	0.945	100	0.155	Contact Map
2pqcA	1	0.9427	100	0.191	Contact Map
3slhA	4	0.9495	100	0.205	Contact Map
3zh4A	1	0.9404	100	0.21	Contact Map
3r38A	2	0.9748	100	0.216	Contact Map
1rf6A	1	0.9266	100	0.222	Contact Map
1ejdA	4	0.9564	100	0.226	Contact Map
4fqdA	2	0.9381	100	0.231	Contact Map
2yvwA	1	0.9518	100	0.235	Contact Map
5bq2A	4	0.9564	100	0.236	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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