YLLA - BACSU - GREMLIN Contacts

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YLLA - UPF0747 protein YllA

UniProt:	P55342	Sequences: MQLTELSIKNQNVFVQHYIDGKEEMSSFFDYSIHHKDMWRERLEDLSSRFFAREELAAYLTSYHNKFGSSAMQSAIEKLKDPSSAAVVGGQQAGLLTGPLYTIHKIISIIVLAKQQEKELQVPVIPIFWVAGEDHDLDEINFVHTSEENGPVKKKLPQSYWKKSSAASTSLDQEKCAAWIDDVFAAFEETDHTNTLLDNVKRCLRESVTFTDFFELLIADLFQEEGLVLLNSGDPGIKKLETAMFQKILRENDELARAVSDQQAFMRQAGYKPIIESGKEQANLFYEYEDERFLIEKDNGRFVIKELDLGWTRDELHTHMEEHPERFSNNVVTRPLMQEFLIPTLAFIAGPGEINYWGELKQAFAVMGFKMPPVMPRLNITILERHIEKKLAERNISLQDAIERGTENQRETYFERQIPEEFTAVMDQAKSQIEAIHKTVRQEALKVDQSLEPLLLKNAAFIQDQLQFLERTVMKRIEEKEGYVLKDYERIQNSIKPLLAPQERIWNIMYYLNRYGPKFFTTFKNLPFSFQNQHQVVKL	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	539 (518)
Sequences:	635 (529)
Seq/√Len:	23.2

BACSU - YLLA

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
246_Q	321_E	8.549	1.00
168_S	233_G	5.500	1.00
88_V	342_I	5.425	1.00
230_L	342_I	4.538	1.00
17_H	271_Y	4.322	1.00
247_K	251_E	3.894	1.00
58_A	80_K	3.880	1.00
76_I	228_V	3.752	1.00
318_T	322_E	3.691	1.00
249_L	316_L	3.656	1.00
263_Q	359_E	3.473	1.00
323_H	326_R	3.277	1.00
382_I	519_F	3.242	1.00
286_Y	311_W	3.236	1.00
43_L	85_A	3.202	1.00
319_H	327_F	3.151	1.00
225_E	524_K	3.048	1.00
30_D	365_A	2.991	1.00
301_R	310_G	2.981	1.00
320_M	327_F	2.938	1.00
59_Y	232_S	2.934	1.00
60_L	228_V	2.928	1.00
357_W	364_F	2.907	0.99
430_K	467_Q	2.855	0.99
61_T	80_K	2.813	0.99
166_A	169_T	2.733	0.99
57_A	80_K	2.681	0.99
114_K	118_K	2.671	0.99
106_I	218_I	2.670	0.99
313_R	317_H	2.669	0.99
165_S	287_E	2.648	0.99
298_D	303_V	2.625	0.99
319_H	323_H	2.616	0.99
140_I	166_A	2.528	0.99
346_A	375_M	2.393	0.98
384_E	387_I	2.377	0.98
54_E	80_K	2.366	0.98
115_Q	119_E	2.350	0.98
87_V	113_A	2.339	0.97
69_S	73_Q	2.310	0.97
393_E	487_D	2.307	0.97
117_E	123_P	2.300	0.97
77_E	80_K	2.224	0.97
40_R	119_E	2.213	0.96
264_A	268_Q	2.212	0.96
75_A	78_K	2.153	0.96
61_T	76_I	2.114	0.95
259_V	332_V	2.090	0.95
384_E	514_R	2.081	0.95
251_E	254_E	2.073	0.95
250_R	313_R	2.037	0.94
245_F	320_M	2.036	0.94
236_G	239_K	2.023	0.94
244_M	340_F	2.020	0.94
239_K	325_E	2.020	0.94
90_G	129_W	2.019	0.94
339_E	364_F	2.009	0.94
458_N	465_Q	2.008	0.94
248_I	284_L	1.996	0.94
28_F	266_M	1.993	0.94
89_G	109_I	1.973	0.93
61_T	77_E	1.972	0.93
78_K	123_P	1.966	0.93
78_K	117_E	1.958	0.93
93_A	131_A	1.944	0.93
434_E	463_Q	1.933	0.93
311_W	319_H	1.931	0.93
114_K	225_E	1.909	0.92
241_E	245_F	1.903	0.92
89_G	347_F	1.898	0.92
90_G	131_A	1.878	0.91
47_S	122_V	1.877	0.91
304_I	307_L	1.861	0.91
60_L	64_H	1.840	0.91
137_L	166_A	1.806	0.90
59_Y	234_D	1.800	0.90
451_L	472_T	1.799	0.90
363_A	367_M	1.790	0.89
351_P	376_P	1.772	0.89
45_D	370_K	1.771	0.89
384_E	494_S	1.768	0.89
164_S	167_A	1.746	0.88
202_R	220_D	1.717	0.87
246_Q	317_H	1.699	0.87
64_H	228_V	1.698	0.87
71_A	74_S	1.692	0.86
42_R	46_L	1.685	0.86
73_Q	76_I	1.681	0.86
329_N	337_M	1.679	0.86
35_H	38_M	1.636	0.84
339_E	357_W	1.611	0.84
61_T	73_Q	1.608	0.83
114_K	524_K	1.604	0.83
441_R	456_L	1.603	0.83
131_A	231_N	1.599	0.83
207_S	216_L	1.583	0.82
298_D	301_R	1.573	0.82
241_E	337_M	1.566	0.82
250_R	317_H	1.554	0.81
297_K	300_G	1.554	0.81
244_M	248_I	1.552	0.81
21_G	35_H	1.547	0.81
93_A	130_V	1.540	0.81
38_M	373_P	1.514	0.79
85_A	122_V	1.511	0.79
242_T	320_M	1.502	0.79
231_N	335_P	1.502	0.79
198_D	202_R	1.495	0.79
430_K	470_E	1.484	0.78
58_A	314_D	1.484	0.78
422_F	443_E	1.484	0.78
224_E	521_T	1.479	0.78
249_L	320_M	1.461	0.77
333_T	363_A	1.448	0.76
112_L	375_M	1.439	0.76
237_I	311_W	1.437	0.76
30_D	45_D	1.429	0.75
203_C	217_L	1.428	0.75
317_H	320_M	1.417	0.75
17_H	22_K	1.414	0.75
72_M	76_I	1.404	0.74
14_F	355_N	1.387	0.73
258_A	366_V	1.384	0.73
263_Q	270_G	1.376	0.72
381_T	534_H	1.374	0.72
431_S	434_E	1.372	0.72
246_Q	250_R	1.364	0.72
130_V	215_E	1.360	0.72
493_N	498_L	1.358	0.71
296_E	305_K	1.351	0.71
87_V	242_T	1.348	0.71
319_H	326_R	1.347	0.71
162_K	169_T	1.338	0.70
437_H	458_N	1.335	0.70
204_L	213_F	1.332	0.70
69_S	72_M	1.319	0.69
96_L	179_W	1.318	0.69
31_Y	45_D	1.315	0.69
241_E	329_N	1.310	0.69
433_I	436_I	1.303	0.68
199_N	220_D	1.300	0.68
31_Y	42_R	1.297	0.68
410_R	489_E	1.288	0.67
33_I	38_M	1.288	0.67
241_E	333_T	1.287	0.67
93_A	347_F	1.278	0.67
284_L	320_M	1.273	0.66
41_E	228_V	1.263	0.66
53_R	82_P	1.262	0.66
461_F	465_Q	1.260	0.66
351_P	379_N	1.260	0.66
120_L	124_V	1.254	0.65
261_D	264_A	1.252	0.65
456_L	459_A	1.251	0.65
295_I	304_I	1.248	0.65
167_A	329_N	1.247	0.65
43_L	122_V	1.244	0.64
168_S	289_E	1.227	0.63
107_I	524_K	1.222	0.63
287_E	450_S	1.220	0.63
266_M	359_E	1.218	0.63
49_R	370_K	1.209	0.62
112_L	361_K	1.207	0.62
351_P	501_P	1.201	0.62
299_N	320_M	1.200	0.62
422_F	477_I	1.196	0.61
452_E	456_L	1.189	0.61
274_I	359_E	1.187	0.61
89_G	329_N	1.186	0.61
184_F	189_E	1.185	0.61
62_S	236_G	1.180	0.60
125_I	228_V	1.176	0.60
283_N	476_R	1.157	0.59
22_K	25_M	1.156	0.59
129_W	135_H	1.153	0.58
239_K	242_T	1.148	0.58
289_E	427_D	1.145	0.58
195_T	517_P	1.144	0.58
409_Q	416_R	1.142	0.58
252_N	282_A	1.139	0.58
37_D	181_D	1.137	0.57
482_G	486_K	1.137	0.57
57_A	79_L	1.128	0.57
321_E	396_I	1.127	0.57
91_Q	94_G	1.124	0.56
286_Y	323_H	1.123	0.56
83_S	123_P	1.123	0.56
286_Y	319_H	1.122	0.56
72_M	228_V	1.122	0.56
248_I	329_N	1.120	0.56
40_R	68_G	1.119	0.56
52_A	240_L	1.117	0.56
396_I	400_D	1.115	0.56
74_S	77_E	1.112	0.56
472_T	475_K	1.111	0.56
68_G	234_D	1.110	0.56
456_L	511_Y	1.109	0.55
228_V	383_L	1.099	0.55
301_R	312_T	1.095	0.54
30_D	42_R	1.093	0.54
427_D	431_S	1.089	0.54
382_I	511_Y	1.085	0.54
253_D	297_K	1.083	0.54
230_L	237_I	1.079	0.53
293_F	304_I	1.077	0.53
218_I	229_L	1.072	0.53
144_H	505_I	1.069	0.53
218_I	485_L	1.069	0.53
87_V	346_A	1.063	0.52
199_N	217_L	1.060	0.52
208_V	212_D	1.054	0.52
394_R	487_D	1.052	0.52
39_W	345_L	1.048	0.51
62_S	65_N	1.048	0.51
241_E	248_I	1.047	0.51
60_L	342_I	1.045	0.51
295_I	327_F	1.043	0.51
289_E	396_I	1.041	0.51
391_L	401_A	1.039	0.51
340_F	369_F	1.038	0.51
248_I	333_T	1.030	0.50
90_G	135_H	1.028	0.50
183_V	258_A	1.027	0.50
508_I	512_L	1.024	0.50
59_Y	230_L	1.019	0.49
398_L	536_V	1.018	0.49
345_L	364_F	1.018	0.49
102_T	218_I	1.018	0.49
400_D	412_T	1.017	0.49
454_L	468_F	1.014	0.49
354_I	376_P	1.013	0.49
448_D	476_R	1.012	0.49
46_L	344_T	1.012	0.49
239_K	317_H	1.011	0.49
482_G	487_D	1.009	0.48
442_Q	445_L	1.005	0.48
111_V	114_K	1.005	0.48
259_V	363_A	1.005	0.48
435_A	467_Q	0.997	0.48
91_Q	344_T	0.996	0.48
262_Q	295_I	0.996	0.48
433_I	462_I	0.993	0.47
402_I	496_K	0.991	0.47
162_K	166_A	0.989	0.47
526_L	531_Q	0.986	0.47
162_K	165_S	0.986	0.47
433_I	480_K	0.985	0.47
75_A	315_E	0.979	0.46
172_D	268_Q	0.977	0.46
133_E	357_W	0.973	0.46
388_E	536_V	0.971	0.46
57_A	76_I	0.967	0.46
115_Q	528_F	0.967	0.46
200_V	217_L	0.963	0.45
24_E	520_F	0.963	0.45
23_E	26_S	0.962	0.45
97_T	103_I	0.961	0.45
288_Y	326_R	0.959	0.45
71_A	77_E	0.959	0.45
106_I	339_E	0.958	0.45
286_Y	342_I	0.956	0.45
54_E	58_A	0.953	0.45
140_I	473_V	0.953	0.45
185_A	407_E	0.951	0.44
202_R	206_E	0.949	0.44
41_E	44_E	0.949	0.44
387_I	494_S	0.946	0.44
289_E	388_E	0.937	0.43
77_E	463_Q	0.937	0.43
410_R	413_Y	0.933	0.43
232_S	485_L	0.933	0.43
35_H	533_Q	0.929	0.43
135_H	140_I	0.926	0.43
74_S	499_L	0.925	0.43
132_G	232_S	0.925	0.43
238_K	248_I	0.923	0.43
328_S	364_F	0.916	0.42
282_A	302_F	0.913	0.42
426_M	429_A	0.911	0.42
222_F	227_L	0.909	0.42
47_S	83_S	0.907	0.41
444_A	473_V	0.907	0.41
210_F	347_F	0.906	0.41
447_V	451_L	0.905	0.41
127_I	310_G	0.903	0.41
314_D	318_T	0.903	0.41
299_N	431_S	0.903	0.41
90_G	231_N	0.903	0.41
114_K	408_N	0.901	0.41
104_H	380_I	0.900	0.41
454_L	458_N	0.900	0.41
333_T	364_F	0.899	0.41
457_K	461_F	0.897	0.41
40_R	44_E	0.895	0.41
249_L	313_R	0.895	0.41
216_L	220_D	0.894	0.41
434_E	438_K	0.894	0.41
248_I	337_M	0.893	0.41
387_I	491_I	0.889	0.40
95_L	237_I	0.887	0.40
76_I	396_I	0.887	0.40
246_Q	396_I	0.886	0.40
258_A	261_D	0.882	0.40
271_Y	386_H	0.882	0.40
14_F	169_T	0.879	0.40
133_E	330_N	0.876	0.39
261_D	428_Q	0.873	0.39
520_F	523_F	0.871	0.39
109_I	389_K	0.869	0.39
209_T	485_L	0.865	0.39
90_G	93_A	0.864	0.39
238_K	295_I	0.863	0.38
462_I	465_Q	0.862	0.38
102_T	344_T	0.861	0.38
101_Y	347_F	0.860	0.38
167_A	231_N	0.859	0.38
141_N	333_T	0.859	0.38
64_H	219_A	0.857	0.38
238_K	283_N	0.855	0.38
60_L	76_I	0.855	0.38
137_L	141_N	0.848	0.38
117_E	124_V	0.844	0.37
69_S	76_I	0.842	0.37
210_F	349_A	0.842	0.37
168_S	290_D	0.842	0.37
432_Q	436_I	0.840	0.37
384_E	510_Y	0.838	0.37
91_Q	214_F	0.838	0.37
53_R	343_P	0.837	0.37
43_L	124_V	0.836	0.37
294_L	347_F	0.835	0.37
383_L	495_I	0.833	0.37
72_M	225_E	0.833	0.37
107_I	511_Y	0.833	0.37
255_L	363_A	0.828	0.36
290_D	435_A	0.828	0.36
458_N	468_F	0.827	0.36
187_F	298_D	0.826	0.36
43_L	47_S	0.826	0.36
61_T	68_G	0.826	0.36
407_E	411_E	0.824	0.36
77_E	240_L	0.824	0.36
275_I	332_V	0.823	0.36
14_F	266_M	0.821	0.36
140_I	487_D	0.820	0.36
469_L	501_P	0.816	0.35
42_R	345_L	0.815	0.35
238_K	328_S	0.812	0.35
190_T	513_N	0.812	0.35
213_F	347_F	0.811	0.35
247_K	365_A	0.809	0.35
259_V	283_N	0.805	0.35
164_S	169_T	0.804	0.35
78_K	84_S	0.802	0.35
89_G	132_G	0.801	0.34
422_F	479_E	0.800	0.34
311_W	314_D	0.799	0.34
88_V	333_T	0.796	0.34
329_N	333_T	0.791	0.34
61_T	435_A	0.791	0.34
25_M	44_E	0.790	0.34
304_I	309_L	0.788	0.34
301_R	314_D	0.788	0.34
248_I	283_N	0.788	0.34
270_G	290_D	0.786	0.34
437_H	462_I	0.785	0.33
132_G	513_N	0.785	0.33
327_F	378_L	0.784	0.33
429_A	472_T	0.782	0.33
277_S	283_N	0.781	0.33
86_A	102_T	0.780	0.33
265_F	268_Q	0.778	0.33
297_K	313_R	0.778	0.33
44_E	246_Q	0.775	0.33
275_I	360_L	0.773	0.33
133_E	328_S	0.773	0.33
90_G	335_P	0.770	0.33
268_Q	445_L	0.770	0.33
348_I	406_T	0.768	0.32
116_Q	119_E	0.764	0.32
71_A	416_R	0.764	0.32
113_A	385_R	0.763	0.32
132_G	167_A	0.762	0.32
206_E	230_L	0.762	0.32
106_I	359_E	0.762	0.32
498_L	505_I	0.762	0.32
188_E	402_I	0.761	0.32
55_E	62_S	0.758	0.32
235_P	312_T	0.756	0.32
29_F	179_W	0.753	0.32
314_D	431_S	0.752	0.31
300_G	517_P	0.752	0.31
89_G	248_I	0.747	0.31
109_I	342_I	0.747	0.31
111_V	524_K	0.746	0.31
172_D	218_I	0.743	0.31
76_I	448_D	0.743	0.31
304_I	327_F	0.743	0.31
351_P	534_H	0.742	0.31
167_A	232_S	0.735	0.30
63_Y	130_V	0.735	0.30
120_L	345_L	0.733	0.30
312_T	316_L	0.733	0.30
252_N	255_L	0.732	0.30
58_A	236_G	0.732	0.30
238_K	329_N	0.730	0.30
269_A	279_K	0.730	0.30
390_K	487_D	0.729	0.30
458_N	462_I	0.727	0.30
294_L	337_M	0.726	0.30
89_G	229_L	0.726	0.30
414_F	421_E	0.725	0.30
252_N	302_F	0.725	0.30
91_Q	102_T	0.725	0.30
294_L	329_N	0.724	0.30
238_K	337_M	0.724	0.30
232_S	333_T	0.723	0.30
293_F	306_E	0.722	0.30
86_A	125_I	0.722	0.30
91_Q	371_M	0.720	0.30
232_S	241_E	0.719	0.30
89_G	337_M	0.719	0.30
39_W	112_L	0.718	0.29
282_A	344_T	0.718	0.29
390_K	394_R	0.717	0.29
81_D	479_E	0.717	0.29
63_Y	527_P	0.716	0.29
269_A	319_H	0.716	0.29
103_I	354_I	0.715	0.29
37_D	310_G	0.714	0.29
81_D	202_R	0.712	0.29
531_Q	535_Q	0.712	0.29
75_A	110_I	0.711	0.29
181_D	184_F	0.710	0.29
155_K	536_V	0.710	0.29
29_F	378_L	0.709	0.29
97_T	507_N	0.708	0.29
41_E	428_Q	0.707	0.29
413_Y	484_V	0.704	0.29
233_G	488_Y	0.704	0.29
86_A	210_F	0.703	0.29
250_R	314_D	0.702	0.29
333_T	357_W	0.702	0.29
337_M	357_W	0.701	0.28
396_I	495_I	0.699	0.28
127_I	230_L	0.699	0.28
264_A	467_Q	0.696	0.28
288_Y	311_W	0.696	0.28
64_H	508_I	0.696	0.28
299_N	421_E	0.696	0.28
312_T	475_K	0.695	0.28
485_L	526_L	0.695	0.28
28_F	537_V	0.694	0.28
84_S	123_P	0.691	0.28
316_L	427_D	0.691	0.28
426_M	470_E	0.690	0.28
426_M	494_S	0.690	0.28
337_M	513_N	0.690	0.28
396_I	401_A	0.690	0.28
313_R	482_G	0.690	0.28
384_E	511_Y	0.690	0.28
121_Q	181_D	0.688	0.28
132_G	333_T	0.688	0.28
135_H	335_P	0.687	0.28
65_N	416_R	0.686	0.28
242_T	321_E	0.684	0.28
46_L	433_I	0.684	0.28
237_I	341_L	0.683	0.27
382_I	472_T	0.682	0.27
438_K	442_Q	0.682	0.27
42_R	458_N	0.681	0.27
80_K	247_K	0.681	0.27
127_I	189_E	0.681	0.27
501_P	534_H	0.679	0.27
165_S	168_S	0.678	0.27
142_F	230_L	0.678	0.27
19_I	249_L	0.678	0.27
118_K	318_T	0.676	0.27
225_E	521_T	0.676	0.27
272_K	310_G	0.676	0.27
518_K	522_T	0.675	0.27
410_R	478_E	0.672	0.27
447_V	462_I	0.672	0.27
375_M	490_R	0.671	0.27
131_A	211_T	0.669	0.27
336_L	387_I	0.668	0.27
294_L	378_L	0.668	0.27
413_Y	417_Q	0.667	0.27
331_V	336_L	0.666	0.27
145_T	494_S	0.665	0.26
67_F	219_A	0.665	0.26
55_E	240_L	0.664	0.26
77_E	181_D	0.663	0.26
106_I	344_T	0.662	0.26
81_D	442_Q	0.661	0.26
132_G	231_N	0.660	0.26
35_H	40_R	0.660	0.26
20_D	268_Q	0.660	0.26
85_A	349_A	0.659	0.26
93_A	215_E	0.658	0.26
41_E	236_G	0.658	0.26
78_K	127_I	0.657	0.26
42_R	124_V	0.656	0.26
230_L	524_K	0.655	0.26
235_P	322_E	0.653	0.26
203_C	220_D	0.652	0.26
160_Y	169_T	0.652	0.26
141_N	364_F	0.651	0.26
66_K	77_E	0.650	0.26
167_A	337_M	0.650	0.26
268_Q	452_E	0.648	0.26
95_L	235_P	0.647	0.25
463_Q	536_V	0.646	0.25
126_P	330_N	0.645	0.25
248_I	252_N	0.644	0.25
91_Q	358_G	0.644	0.25
135_H	210_F	0.642	0.25
126_P	133_E	0.642	0.25
62_S	239_K	0.641	0.25
248_I	282_A	0.641	0.25
40_R	398_L	0.640	0.25
163_K	166_A	0.640	0.25
222_F	393_E	0.638	0.25
310_G	446_K	0.638	0.25
103_I	527_P	0.638	0.25
131_A	335_P	0.637	0.25
106_I	506_W	0.637	0.25
232_S	331_V	0.636	0.25
469_L	495_I	0.636	0.25
362_Q	365_A	0.636	0.25
297_K	432_Q	0.636	0.25
242_T	246_Q	0.635	0.25
107_I	259_V	0.635	0.25
419_P	511_Y	0.633	0.25
76_I	315_E	0.633	0.25
54_E	78_K	0.633	0.25
322_E	435_A	0.632	0.25
237_I	241_E	0.631	0.25
71_A	224_E	0.630	0.25
235_P	520_F	0.630	0.25
422_F	444_A	0.627	0.24
106_I	348_I	0.627	0.24
81_D	123_P	0.627	0.24
261_D	499_L	0.627	0.24
13_V	20_D	0.625	0.24
241_E	357_W	0.624	0.24
138_D	401_A	0.623	0.24
87_V	288_Y	0.623	0.24
247_K	407_E	0.623	0.24
249_L	284_L	0.623	0.24
219_A	228_V	0.622	0.24
238_K	241_E	0.621	0.24
63_Y	204_L	0.620	0.24
95_L	440_V	0.620	0.24
53_R	60_L	0.619	0.24
46_L	91_Q	0.619	0.24
279_K	342_I	0.618	0.24
108_S	335_P	0.617	0.24
214_F	358_G	0.617	0.24
347_F	359_E	0.616	0.24
44_E	537_V	0.616	0.24
315_E	472_T	0.615	0.24
344_T	349_A	0.614	0.24
37_D	40_R	0.614	0.24
143_V	200_V	0.614	0.24
53_R	84_S	0.614	0.24
389_K	472_T	0.613	0.24
25_M	266_M	0.613	0.24
142_F	396_I	0.613	0.24
137_L	210_F	0.613	0.24
130_V	212_D	0.612	0.24
85_A	124_V	0.611	0.24
50_F	370_K	0.611	0.24
131_A	135_H	0.610	0.24
114_K	443_E	0.607	0.23
189_E	513_N	0.607	0.23
252_N	297_K	0.607	0.23
132_G	215_E	0.606	0.23
39_W	116_Q	0.606	0.23
124_V	238_K	0.605	0.23
346_A	532_N	0.605	0.23
135_H	141_N	0.603	0.23
13_V	272_K	0.602	0.23
138_D	157_P	0.600	0.23
427_D	470_E	0.600	0.23
262_Q	368_G	0.599	0.23
129_W	335_P	0.597	0.23
192_H	209_T	0.597	0.23
80_K	240_L	0.595	0.23
466_L	479_E	0.595	0.23
89_G	333_T	0.594	0.23
122_V	295_I	0.594	0.23
214_F	351_P	0.593	0.23
221_L	476_R	0.592	0.23
74_S	517_P	0.592	0.23
14_F	306_E	0.592	0.23
294_L	357_W	0.591	0.23
474_M	478_E	0.591	0.23
384_E	490_R	0.591	0.23
27_S	308_D	0.590	0.23
178_A	392_A	0.590	0.23
125_I	437_H	0.589	0.23
156_L	189_E	0.589	0.23
138_D	142_F	0.588	0.22
272_K	354_I	0.588	0.22
66_K	118_K	0.588	0.22
57_A	422_F	0.587	0.22
183_V	187_F	0.587	0.22
11_Q	496_K	0.586	0.22
510_Y	513_N	0.586	0.22
303_V	310_G	0.585	0.22
437_H	527_P	0.583	0.22
71_A	517_P	0.583	0.22
65_N	69_S	0.582	0.22
126_P	328_S	0.582	0.22
37_D	247_K	0.582	0.22
163_K	291_E	0.580	0.22
380_I	527_P	0.579	0.22
93_A	344_T	0.578	0.22
252_N	259_V	0.577	0.22
408_N	488_Y	0.576	0.22
70_S	223_Q	0.575	0.22
198_D	322_E	0.575	0.22
275_I	352_G	0.574	0.22
108_S	263_Q	0.574	0.22
184_F	193_T	0.574	0.22
366_V	482_G	0.573	0.22
138_D	246_Q	0.572	0.22
106_I	227_L	0.572	0.22
264_A	381_T	0.571	0.22
143_V	507_N	0.571	0.22
230_L	299_N	0.569	0.22
60_L	365_A	0.569	0.22
100_L	469_L	0.569	0.22
238_K	450_S	0.568	0.22
114_K	236_G	0.565	0.21
54_E	180_I	0.564	0.21
60_L	413_Y	0.563	0.21
169_T	173_Q	0.563	0.21
76_I	368_G	0.563	0.21
308_D	314_D	0.562	0.21
274_I	278_G	0.562	0.21
82_P	518_K	0.562	0.21
14_F	277_S	0.561	0.21
264_A	435_A	0.561	0.21
165_S	233_G	0.560	0.21
104_H	294_L	0.560	0.21
103_I	221_L	0.558	0.21
500_A	505_I	0.554	0.21
319_H	370_K	0.554	0.21
375_M	530_F	0.554	0.21
84_S	117_E	0.553	0.21
352_G	355_N	0.553	0.21
41_E	431_S	0.552	0.21
167_A	513_N	0.552	0.21
304_I	344_T	0.552	0.21
156_L	228_V	0.552	0.21
237_I	243_A	0.552	0.21
186_A	438_K	0.552	0.21
109_I	348_I	0.551	0.21
262_Q	283_N	0.550	0.21
395_N	445_L	0.550	0.21
133_E	364_F	0.548	0.21
447_V	455_L	0.547	0.21
380_I	384_E	0.546	0.21
281_Q	501_P	0.546	0.21
345_L	357_W	0.546	0.21
108_S	404_R	0.546	0.21
47_S	265_F	0.546	0.21
349_A	364_F	0.545	0.20
156_L	363_A	0.544	0.20
280_E	476_R	0.542	0.20
58_A	421_E	0.542	0.20
13_V	536_V	0.542	0.20
101_Y	360_L	0.540	0.20
181_D	209_T	0.540	0.20
29_F	49_R	0.540	0.20
91_Q	337_M	0.539	0.20
114_K	212_D	0.539	0.20
371_M	455_L	0.539	0.20
249_L	511_Y	0.539	0.20
115_Q	345_L	0.537	0.20
408_N	536_V	0.537	0.20
275_I	347_F	0.537	0.20
236_G	299_N	0.536	0.20
448_D	451_L	0.536	0.20
177_A	201_K	0.536	0.20
183_V	426_M	0.535	0.20
269_A	449_Q	0.535	0.20
74_S	195_T	0.534	0.20
132_G	329_N	0.534	0.20
85_A	283_N	0.533	0.20
436_I	448_D	0.533	0.20
209_T	237_I	0.533	0.20
70_S	518_K	0.533	0.20
383_L	414_F	0.532	0.20
20_D	23_E	0.532	0.20
198_D	300_G	0.532	0.20
84_S	106_I	0.531	0.20
225_E	300_G	0.531	0.20
244_M	333_T	0.531	0.20
101_Y	349_A	0.531	0.20
427_D	459_A	0.531	0.20
342_I	448_D	0.531	0.20
182_D	299_N	0.530	0.20
182_D	415_E	0.530	0.20
327_F	331_V	0.530	0.20
88_V	230_L	0.529	0.20
477_I	481_E	0.529	0.20
86_A	390_K	0.528	0.20
209_T	445_L	0.528	0.20
310_G	442_Q	0.527	0.20
95_L	397_S	0.527	0.20
73_Q	125_I	0.526	0.20
260_S	263_Q	0.525	0.20
137_L	347_F	0.524	0.20
26_S	442_Q	0.524	0.20
380_I	466_L	0.524	0.20
77_E	484_V	0.524	0.20
137_L	280_E	0.524	0.20
320_M	326_R	0.523	0.19
82_P	361_K	0.523	0.19
86_A	524_K	0.523	0.19
326_R	445_L	0.521	0.19
93_A	104_H	0.519	0.19
104_H	418_I	0.519	0.19
77_E	81_D	0.519	0.19
347_F	527_P	0.519	0.19
345_L	523_F	0.518	0.19
81_D	537_V	0.518	0.19
430_K	463_Q	0.517	0.19
266_M	283_N	0.517	0.19
522_T	536_V	0.516	0.19
40_R	206_E	0.516	0.19
202_R	236_G	0.516	0.19
188_E	359_E	0.516	0.19
223_Q	526_L	0.514	0.19
230_L	289_E	0.514	0.19
44_E	314_D	0.514	0.19
190_T	488_Y	0.514	0.19
271_Y	274_I	0.514	0.19
23_E	446_K	0.513	0.19
195_T	209_T	0.513	0.19
437_H	463_Q	0.513	0.19
63_Y	89_G	0.513	0.19
466_L	470_E	0.513	0.19
21_G	463_Q	0.512	0.19
89_G	167_A	0.511	0.19
54_E	66_K	0.511	0.19
270_G	273_P	0.509	0.19
118_K	519_F	0.509	0.19
288_Y	319_H	0.508	0.19
208_V	440_V	0.508	0.19
59_Y	349_A	0.508	0.19
58_A	208_V	0.508	0.19
21_G	33_I	0.507	0.19
90_G	99_P	0.507	0.19
93_A	132_G	0.507	0.19
354_I	374_V	0.507	0.19
116_Q	307_L	0.506	0.19
339_E	507_N	0.506	0.19
44_E	431_S	0.505	0.19
143_V	509_M	0.505	0.19
463_Q	467_Q	0.505	0.19
28_F	262_Q	0.505	0.19
73_Q	77_E	0.505	0.19
339_E	402_I	0.504	0.19
269_A	537_V	0.504	0.19
419_P	433_I	0.504	0.19
121_Q	183_V	0.503	0.19
257_R	261_D	0.502	0.19
125_I	466_L	0.502	0.19
127_I	375_M	0.502	0.19
132_G	337_M	0.501	0.19
46_L	282_A	0.500	0.18
346_A	351_P	0.500	0.18
383_L	413_Y	0.500	0.18

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4wbdA	2	1	100	0.058	Contact Map
4jrbA	1	0.2931	54.4	0.979	Contact Map
4kmoB	1	0.3098	36.8	0.981	Contact Map
2mb9A	1	0.1651	27.2	0.983	Contact Map
4rhwE	1	0.1651	25	0.983	Contact Map
3q4oA	2	0.2894	24.4	0.983	Contact Map
2p1hA	1	0.1651	23.7	0.983	Contact Map
2b1eA	1	0.2412	20.4	0.984	Contact Map
3s84A	2	0.2579	19.2	0.984	Contact Map
2jk1A	2	0.2542	18.7	0.984	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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