YBAR - BACSU - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

YBAR - Putative sulfate transporter YbaR

UniProt:	P55189	Sequences: MNNSFTLKQQWFGNIRKDILAGILVALALIPEAIGFSIIAGVDPMVGLYASFCIAIIISIFGGRPGMISAATGSMAVVMVSLVADHGLQYLFAATILTGIIQVILGISKIARLMKFIPRSVMIGFVNALAILIFSAQLPQFEGASWSMYAMLAGSLVIIYVLPRFTTAVPSPLVAIIVMTIIAVTFHVDVRTVGDMGNISSSLPHFLIPDVPFTFETLQIIFPYSIALAFVGLLESLLTAQIIDEMTDTDSDKNKESRGQGIANIVTGFFGGMAGCAMIGQSVINTKAGGRGRLSAFVAGAFLMFLIAVLSHVVVKIPMAALVAVMVMVSVGTFDWSSLKGLKKAPLTDSIVMVVTVVTVVVTDDLSKGVFVGVLLSAVFFVAKISKLKIVSHAEDQKLRTYQVKGQIFFASVTDLTNAFIYQEDIERVVIDLTEAHVWDDSGAAALDKIVAKFKEQGIEAELKGLNKASKSLMKQMA	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	478 (456)
Sequences:	7658 (4324)
Seq/√Len:	202.5

ECOLI - DAUA ADEP ADEQ GHXP GHXQ
BACSU - YBAR YVDB PBUG
HALSA - Q9HNG4

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
61_F	262_I	4.306	1.00
106_G	258_R	4.264	1.00
141_F	152_L	4.053	1.00
57_I	266_V	3.995	1.00
96_I	268_G	3.665	1.00
359_T	372_V	3.374	1.00
97_L	225_S	3.088	1.00
182_I	186_F	3.037	1.00
392_S	396_D	3.010	1.00
451_V	461_A	3.003	1.00
358_V	362_V	2.952	1.00
181_I	185_T	2.832	1.00
267_T	272_G	2.740	1.00
285_N	295_S	2.737	1.00
22_G	298_V	2.678	1.00
19_I	298_V	2.659	1.00
111_A	254_N	2.649	1.00
156_L	328_M	2.620	1.00
179_M	321_A	2.527	1.00
243_I	282_S	2.520	1.00
104_I	108_S	2.491	1.00
463_L	466_L	2.417	1.00
365_D	368_K	2.387	1.00
50_A	275_G	2.384	1.00
355_V	376_L	2.362	1.00
96_I	265_I	2.349	1.00
398_K	427_E	2.345	1.00
433_L	436_A	2.335	1.00
150_A	154_G	2.334	1.00
340_K	344_K	2.289	1.00
14_N	291_R	2.254	1.00
155_S	324_A	2.234	1.00
359_T	363_T	2.190	1.00
428_R	462_E	2.158	1.00
15_I	19_I	2.129	1.00
101_I	222_F	2.095	1.00
56_I	300_G	2.071	1.00
57_I	262_I	2.061	1.00
399_L	430_V	2.041	1.00
56_I	297_F	2.039	1.00
17_K	291_R	2.033	1.00
76_A	273_M	2.007	1.00
105_L	110_I	2.002	1.00
247_T	286_T	1.952	1.00
156_L	324_A	1.948	1.00
155_S	175_A	1.948	1.00
75_M	228_L	1.948	1.00
104_I	107_I	1.928	1.00
157_V	161_V	1.923	1.00
101_I	229_A	1.894	1.00
337_S	340_K	1.876	1.00
305_F	309_V	1.874	1.00
54_I	275_G	1.867	1.00
148_M	320_A	1.860	1.00
451_V	455_K	1.840	1.00
159_I	175_A	1.795	1.00
184_V	316_K	1.794	1.00
100_I	265_I	1.771	1.00
266_V	270_F	1.753	1.00
147_S	150_A	1.742	1.00
57_I	61_F	1.739	1.00
100_I	104_I	1.732	1.00
15_I	298_V	1.728	1.00
356_T	373_G	1.723	1.00
298_V	302_F	1.719	1.00
190_V	193_V	1.715	1.00
420_F	450_I	1.704	1.00
399_L	428_R	1.686	1.00
156_L	160_Y	1.683	1.00
28_A	284_I	1.678	1.00
160_Y	328_M	1.675	1.00
301_A	305_F	1.670	1.00
181_I	184_V	1.659	1.00
152_L	324_A	1.655	1.00
61_F	259_G	1.651	1.00
101_I	225_S	1.651	1.00
134_F	327_V	1.640	1.00
101_I	226_I	1.637	1.00
258_R	262_I	1.634	1.00
94_A	221_I	1.630	1.00
354_V	358_V	1.620	1.00
169_V	174_V	1.619	1.00
89_Q	207_L	1.617	1.00
191_R	194_G	1.604	1.00
192_T	195_D	1.601	1.00
219_Q	222_F	1.598	1.00
26_A	302_F	1.591	1.00
177_I	181_I	1.589	1.00
33_A	72_T	1.567	1.00
426_I	459_I	1.562	1.00
99_G	265_I	1.561	1.00
383_A	387_K	1.557	1.00
180_T	183_A	1.555	1.00
183_A	188_V	1.554	1.00
413_V	446_A	1.553	1.00
70_A	281_Q	1.553	1.00
98_T	228_L	1.539	1.00
131_I	361_V	1.531	1.00
107_I	258_R	1.521	1.00
18_D	291_R	1.521	1.00
413_V	442_S	1.507	1.00
153_A	157_V	1.504	1.00
155_S	179_M	1.496	1.00
255_K	258_R	1.496	1.00
290_G	295_S	1.486	1.00
15_I	294_L	1.485	1.00
42_V	273_M	1.485	1.00
452_A	456_E	1.479	1.00
179_M	183_A	1.461	1.00
23_I	302_F	1.461	1.00
82_L	224_Y	1.461	1.00
59_S	297_F	1.459	1.00
130_A	330_S	1.454	1.00
42_V	83_V	1.453	1.00
198_N	201_S	1.453	1.00
140_Q	323_V	1.448	1.00
60_I	297_F	1.448	1.00
164_R	168_A	1.437	1.00
431_I	461_A	1.428	1.00
146_W	150_A	1.426	1.00
155_S	321_A	1.425	1.00
103_V	258_R	1.424	1.00
428_R	460_E	1.423	1.00
53_C	270_F	1.418	1.00
79_M	274_A	1.410	1.00
127_N	357_V	1.399	1.00
154_G	179_M	1.389	1.00
141_F	327_V	1.374	1.00
58_I	69_S	1.365	1.00
94_A	228_L	1.362	1.00
97_L	221_I	1.355	1.00
95_T	268_G	1.351	1.00
417_T	449_K	1.350	1.00
103_V	265_I	1.346	1.00
285_N	290_G	1.345	1.00
407_Q	437_H	1.339	1.00
166_T	169_V	1.330	1.00
161_V	165_F	1.329	1.00
217_T	220_I	1.320	1.00
405_K	435_E	1.314	1.00
431_I	463_L	1.312	1.00
210_D	214_T	1.310	1.00
360_V	369_G	1.301	1.00
103_V	107_I	1.287	1.00
131_I	357_V	1.283	1.00
55_A	300_G	1.274	1.00
141_F	323_V	1.271	1.00
93_A	218_L	1.271	1.00
219_Q	223_P	1.268	1.00
106_G	111_A	1.264	1.00
130_A	334_F	1.262	1.00
216_E	219_Q	1.259	1.00
468_K	472_S	1.259	1.00
12_F	16_R	1.257	1.00
225_S	229_A	1.257	1.00
454_F	459_I	1.251	1.00
154_G	182_I	1.242	1.00
363_T	368_K	1.234	1.00
67_M	277_A	1.230	1.00
306_L	310_L	1.229	1.00
114_M	117_I	1.223	1.00
80_V	84_A	1.221	1.00
171_S	175_A	1.212	1.00
294_L	298_V	1.202	1.00
335_D	338_S	1.201	1.00
53_C	266_V	1.200	1.00
385_I	409_F	1.191	1.00
98_T	229_A	1.168	1.00
214_T	217_T	1.158	1.00
149_Y	153_A	1.157	1.00
466_L	470_S	1.145	1.00
297_F	301_A	1.143	1.00
160_Y	331_V	1.139	1.00
248_D	456_E	1.138	1.00
151_M	190_V	1.136	1.00
66_G	286_T	1.135	1.00
191_R	195_D	1.133	1.00
222_F	226_I	1.130	1.00
239_T	279_I	1.127	1.00
244_D	251_S	1.127	1.00
21_A	25_V	1.123	1.00
430_V	462_E	1.120	1.00
206_F	209_P	1.120	1.00
54_I	267_T	1.119	1.00
57_I	259_G	1.119	1.00
22_G	26_A	1.111	1.00
233_L	257_S	1.110	1.00
400_R	426_I	1.105	1.00
42_V	46_V	1.103	1.00
421_I	453_K	1.101	1.00
390_I	402_Y	1.100	1.00
127_N	130_A	1.099	1.00
182_I	185_T	1.098	1.00
419_A	423_Q	1.096	1.00
284_I	288_A	1.096	1.00
158_I	175_A	1.095	1.00
371_F	375_L	1.094	1.00
82_L	94_A	1.094	1.00
68_I	296_A	1.093	1.00
187_H	190_V	1.090	1.00
343_K	347_L	1.087	1.00
109_K	112_R	1.076	1.00
135_S	138_L	1.075	1.00
53_C	267_T	1.074	1.00
59_S	296_A	1.066	1.00
450_I	461_A	1.065	1.00
102_Q	232_G	1.065	1.00
30_I	303_L	1.065	1.00
390_I	419_A	1.062	1.00
52_F	304_M	1.059	1.00
351_I	355_V	1.058	1.00
106_G	261_G	1.054	1.00
149_Y	152_L	1.053	1.00
159_I	324_A	1.051	1.00
154_G	158_I	1.047	1.00
206_F	270_F	1.047	1.00
434_T	465_G	1.042	1.00
33_A	51_S	1.041	1.00
150_A	153_A	1.040	1.00
46_V	88_L	1.040	1.00
263_A	267_T	1.036	1.00
444_A	448_D	1.034	1.00
152_L	327_V	1.032	1.00
467_N	470_S	1.026	1.00
151_M	179_M	1.024	1.00
83_V	87_G	1.023	1.00
18_D	292_G	1.022	1.00
402_Y	420_F	1.019	1.00
407_Q	436_A	1.014	1.00
305_F	308_A	1.007	1.00
66_G	247_T	1.006	1.00
94_A	225_S	0.999	1.00
58_I	275_G	0.998	1.00
337_S	341_G	0.998	1.00
162_L	171_S	0.991	1.00
415_D	419_A	0.989	1.00
52_F	300_G	0.984	1.00
433_L	466_L	0.983	1.00
192_T	196_M	0.982	1.00
429_V	454_F	0.980	1.00
48_L	303_L	0.978	1.00
343_K	350_S	0.977	1.00
313_V	316_K	0.977	1.00
154_G	161_V	0.976	1.00
453_K	457_Q	0.974	1.00
75_M	98_T	0.971	1.00
72_T	278_M	0.965	0.99
416_L	450_I	0.964	0.99
93_A	97_L	0.963	0.99
91_L	95_T	0.962	0.99
243_I	286_T	0.961	0.99
387_K	415_D	0.960	0.99
42_V	91_L	0.953	0.99
96_I	269_F	0.953	0.99
417_T	421_I	0.951	0.99
381_F	409_F	0.949	0.99
165_F	168_A	0.948	0.99
182_I	188_V	0.947	0.99
148_M	152_L	0.945	0.99
69_S	260_Q	0.943	0.99
419_A	422_Y	0.940	0.99
437_H	467_N	0.938	0.99
355_V	359_T	0.935	0.99
92_F	268_G	0.932	0.99
68_I	74_S	0.932	0.99
244_D	249_T	0.930	0.99
252_D	255_K	0.926	0.99
408_I	416_L	0.925	0.99
152_L	320_A	0.925	0.99
216_E	220_I	0.923	0.99
158_I	178_V	0.922	0.99
309_V	312_H	0.919	0.99
208_I	269_F	0.918	0.99
368_K	372_V	0.916	0.99
368_K	371_F	0.915	0.99
341_G	345_A	0.915	0.99
142_E	149_Y	0.914	0.99
128_A	361_V	0.913	0.99
170_P	174_V	0.913	0.99
336_W	340_K	0.911	0.99
105_L	229_A	0.909	0.99
350_S	354_V	0.904	0.99
146_W	149_Y	0.903	0.99
173_L	177_I	0.900	0.99
403_Q	435_E	0.899	0.99
92_F	95_T	0.887	0.99
190_V	195_D	0.886	0.99
340_K	343_K	0.885	0.99
95_T	274_A	0.884	0.99
180_T	184_V	0.883	0.99
300_G	304_M	0.880	0.99
246_M	283_V	0.880	0.99
374_V	410_F	0.880	0.99
97_L	101_I	0.879	0.99
348_T	380_F	0.879	0.99
118_P	377_S	0.879	0.99
432_D	464_K	0.877	0.99
431_I	447_L	0.876	0.99
99_G	261_G	0.876	0.99
432_D	465_G	0.876	0.99
109_K	254_N	0.873	0.99
220_I	223_P	0.872	0.99
174_V	178_V	0.870	0.99
116_F	409_F	0.869	0.99
226_I	230_F	0.869	0.99
224_Y	227_A	0.867	0.99
402_Y	416_L	0.865	0.99
148_M	193_V	0.862	0.99
16_R	20_L	0.862	0.99
339_L	353_M	0.861	0.99
210_D	216_E	0.858	0.99
163_P	332_G	0.856	0.99
294_L	297_F	0.851	0.99
246_M	286_T	0.850	0.99
381_F	385_I	0.850	0.99
430_V	464_K	0.849	0.99
334_F	339_L	0.847	0.99
306_L	314_V	0.846	0.99
98_T	274_A	0.846	0.99
19_I	23_I	0.844	0.99
355_V	372_V	0.841	0.99
21_A	288_A	0.840	0.99
98_T	102_Q	0.839	0.99
154_G	178_V	0.835	0.99
198_N	315_V	0.834	0.98
235_E	276_C	0.834	0.98
208_I	211_V	0.834	0.98
21_A	295_S	0.834	0.98
408_I	436_A	0.831	0.98
162_L	174_V	0.828	0.98
380_F	384_K	0.828	0.98
355_V	358_V	0.826	0.98
162_L	165_F	0.824	0.98
29_L	299_A	0.824	0.98
378_A	382_V	0.823	0.98
239_T	278_M	0.821	0.98
183_A	186_F	0.820	0.98
112_R	254_N	0.820	0.98
134_F	330_S	0.819	0.98
102_Q	233_L	0.808	0.98
93_A	221_I	0.807	0.98
36_F	73_G	0.806	0.98
120_S	442_S	0.806	0.98
235_E	279_I	0.805	0.98
401_T	464_K	0.804	0.98
441_D	445_A	0.804	0.98
128_A	360_V	0.803	0.98
402_Y	423_Q	0.802	0.98
33_A	37_S	0.802	0.98
445_A	449_K	0.802	0.98
22_G	302_F	0.802	0.98
54_I	58_I	0.801	0.98
58_I	259_G	0.801	0.98
63_G	259_G	0.798	0.98
159_I	172_P	0.796	0.98
194_G	319_M	0.796	0.98
157_V	160_Y	0.795	0.98
66_G	290_G	0.793	0.98
83_V	91_L	0.792	0.98
94_A	98_T	0.790	0.98
235_E	239_T	0.789	0.98
37_S	46_V	0.788	0.98
128_A	357_V	0.788	0.98
75_M	231_V	0.788	0.98
101_I	105_L	0.788	0.98
352_V	380_F	0.788	0.98
72_T	279_I	0.787	0.98
250_D	418_N	0.783	0.98
347_L	351_I	0.781	0.98
388_L	415_D	0.780	0.98
215_F	218_L	0.779	0.98
13_G	16_R	0.776	0.98
468_K	471_K	0.776	0.98
71_A	281_Q	0.775	0.98
42_V	88_L	0.775	0.98
310_L	313_V	0.770	0.97
151_M	155_S	0.770	0.97
452_A	455_K	0.768	0.97
105_L	257_S	0.767	0.97
265_I	269_F	0.761	0.97
48_L	307_I	0.760	0.97
107_I	110_I	0.759	0.97
159_I	171_S	0.758	0.97
404_V	416_L	0.758	0.97
190_V	194_G	0.755	0.97
338_S	341_G	0.753	0.97
193_V	196_M	0.753	0.97
447_L	451_V	0.752	0.97
89_Q	92_F	0.752	0.97
53_C	57_I	0.752	0.97
353_M	357_V	0.750	0.97
454_F	461_A	0.740	0.97
263_A	266_V	0.740	0.97
401_T	430_V	0.737	0.97
262_I	265_I	0.736	0.97
28_A	32_E	0.736	0.97
28_A	33_A	0.733	0.97
151_M	154_G	0.733	0.97
62_G	259_G	0.729	0.96
425_D	459_I	0.729	0.96
45_M	307_I	0.727	0.96
51_S	303_L	0.724	0.96
375_L	379_V	0.720	0.96
469_A	472_S	0.720	0.96
78_V	81_S	0.719	0.96
119_R	445_A	0.717	0.96
66_G	249_T	0.716	0.96
341_G	445_A	0.716	0.96
403_Q	432_D	0.716	0.96
46_V	273_M	0.713	0.96
281_Q	326_M	0.711	0.96
328_M	332_G	0.711	0.96
32_E	129_L	0.710	0.96
266_V	272_G	0.710	0.96
207_L	271_G	0.709	0.96
200_S	203_L	0.707	0.96
49_Y	202_S	0.707	0.96
86_H	89_Q	0.707	0.96
129_L	279_I	0.705	0.96
41_G	80_V	0.705	0.96
446_A	450_I	0.705	0.96
263_A	275_G	0.704	0.96
295_S	299_A	0.703	0.96
180_T	317_I	0.703	0.96
94_A	224_Y	0.703	0.96
97_L	100_I	0.703	0.96
470_S	473_L	0.702	0.96
328_M	331_V	0.701	0.96
74_S	129_L	0.699	0.96
26_A	303_L	0.698	0.96
90_Y	93_A	0.693	0.95
215_F	219_Q	0.689	0.95
91_L	274_A	0.687	0.95
222_F	225_S	0.687	0.95
455_K	460_E	0.685	0.95
75_M	79_M	0.683	0.95
420_F	454_F	0.683	0.95
425_D	457_Q	0.682	0.95
179_M	182_I	0.681	0.95
90_Y	217_T	0.680	0.95
79_M	91_L	0.678	0.95
151_M	320_A	0.678	0.95
283_V	287_K	0.677	0.95
29_L	32_E	0.677	0.95
52_F	56_I	0.676	0.95
466_L	471_K	0.674	0.95
29_L	55_A	0.674	0.95
170_P	173_L	0.673	0.95
400_R	423_Q	0.672	0.95
39_I	74_S	0.672	0.95
98_T	232_G	0.669	0.94
236_S	277_A	0.668	0.94
178_V	181_I	0.668	0.94
175_A	321_A	0.667	0.94
36_F	280_G	0.666	0.94
86_H	217_T	0.664	0.94
59_S	63_G	0.664	0.94
122_M	241_Q	0.664	0.94
207_L	210_D	0.663	0.94
125_F	235_E	0.661	0.94
341_G	344_K	0.660	0.94
151_M	182_I	0.659	0.94
268_G	272_G	0.659	0.94
203_L	209_P	0.658	0.94
12_F	15_I	0.655	0.94
123_I	338_S	0.655	0.94
81_S	85_D	0.654	0.94
147_S	151_M	0.653	0.94
33_A	36_F	0.652	0.94
453_K	456_E	0.651	0.94
162_L	166_T	0.651	0.94
34_I	199_I	0.651	0.94
65_P	249_T	0.650	0.93
342_L	350_S	0.649	0.93
175_A	179_M	0.648	0.93
194_G	315_V	0.647	0.93
352_V	376_L	0.647	0.93
26_A	72_T	0.647	0.93
237_L	251_S	0.644	0.93
240_A	251_S	0.644	0.93
63_G	251_S	0.642	0.93
14_N	292_G	0.642	0.93
448_D	452_A	0.642	0.93
346_P	349_D	0.642	0.93
278_M	281_Q	0.641	0.93
52_F	307_I	0.639	0.93
122_M	333_T	0.638	0.93
151_M	193_V	0.636	0.93
99_G	106_G	0.636	0.93
32_E	278_M	0.636	0.93
55_A	299_A	0.635	0.93
126_V	242_I	0.631	0.92
102_Q	229_A	0.629	0.92
379_V	383_A	0.627	0.92
172_P	325_V	0.626	0.92
106_G	254_N	0.623	0.92
86_H	220_I	0.623	0.92
39_I	72_T	0.622	0.92
72_T	235_E	0.622	0.92
56_I	60_I	0.621	0.92
274_A	281_Q	0.620	0.92
151_M	188_V	0.619	0.92
401_T	432_D	0.617	0.92
15_I	292_G	0.617	0.92
104_I	215_F	0.616	0.92
203_L	206_F	0.616	0.92
417_T	446_A	0.614	0.91
408_I	443_G	0.612	0.91
18_D	21_A	0.612	0.91
391_V	405_K	0.612	0.91
126_V	333_T	0.611	0.91
238_L	279_I	0.611	0.91
28_A	326_M	0.610	0.91
58_I	62_G	0.609	0.91
153_A	161_V	0.609	0.91
239_T	277_A	0.608	0.91
248_D	453_K	0.608	0.91
386_S	412_S	0.607	0.91
282_S	290_G	0.607	0.91
66_G	243_I	0.607	0.91
121_V	373_G	0.605	0.91
221_I	225_S	0.605	0.91
335_D	339_L	0.605	0.91
405_K	467_N	0.603	0.91
416_L	431_I	0.601	0.91
308_A	312_H	0.600	0.90
345_A	441_D	0.599	0.90
14_N	17_K	0.598	0.90
242_I	246_M	0.596	0.90
351_I	376_L	0.596	0.90
132_L	330_S	0.596	0.90
343_K	346_P	0.595	0.90
433_L	464_K	0.594	0.90
347_L	350_S	0.594	0.90
102_Q	260_Q	0.593	0.90
321_A	325_V	0.593	0.90
356_T	366_L	0.593	0.90
455_K	458_G	0.591	0.90
221_I	224_Y	0.589	0.90
425_D	429_V	0.589	0.90
450_I	454_F	0.589	0.90
444_A	473_L	0.588	0.90
155_S	158_I	0.588	0.90
32_E	299_A	0.586	0.89
37_S	43_D	0.584	0.89
426_I	429_V	0.584	0.89
287_K	332_G	0.583	0.89
100_I	269_F	0.583	0.89
187_H	191_R	0.582	0.89
194_G	197_G	0.582	0.89
296_A	300_G	0.580	0.89
158_I	179_M	0.578	0.89
244_D	250_D	0.578	0.89
277_A	282_S	0.576	0.89
398_K	426_I	0.576	0.89
92_F	267_T	0.576	0.89
262_I	266_V	0.576	0.89
103_V	261_G	0.573	0.88
40_A	76_A	0.573	0.88
188_V	191_R	0.572	0.88
308_A	314_V	0.572	0.88
76_A	79_M	0.572	0.88
105_L	226_I	0.571	0.88
129_L	238_L	0.571	0.88
404_V	433_L	0.570	0.88
159_I	328_M	0.570	0.88
278_M	326_M	0.568	0.88
227_A	367_S	0.568	0.88
72_T	117_I	0.568	0.88
116_F	386_S	0.567	0.88
147_S	188_V	0.567	0.88
237_L	373_G	0.567	0.88
278_M	282_S	0.565	0.88
23_I	298_V	0.564	0.88
123_I	353_M	0.563	0.88
58_I	63_G	0.563	0.88
236_S	276_C	0.562	0.87
50_A	53_C	0.562	0.87
181_I	186_F	0.562	0.87
228_L	274_A	0.562	0.87
93_A	208_I	0.562	0.87
105_L	230_F	0.561	0.87
70_A	296_A	0.560	0.87
158_I	162_L	0.559	0.87
202_S	307_I	0.559	0.87
404_V	436_A	0.558	0.87
426_I	454_F	0.558	0.87
239_T	283_V	0.557	0.87
72_T	126_V	0.557	0.87
46_V	50_A	0.556	0.87
58_I	61_F	0.556	0.87
345_A	349_D	0.553	0.87
68_I	278_M	0.552	0.86
32_E	39_I	0.550	0.86
32_E	68_I	0.549	0.86
327_V	330_S	0.549	0.86
245_E	445_A	0.548	0.86
204_P	209_P	0.548	0.86
96_I	100_I	0.548	0.86
74_S	235_E	0.548	0.86
403_Q	434_T	0.548	0.86
64_R	244_D	0.547	0.86
32_E	281_Q	0.547	0.86
205_H	271_G	0.547	0.86
389_K	405_K	0.546	0.86
271_G	373_G	0.545	0.86
178_V	182_I	0.545	0.86
239_T	276_C	0.544	0.86
360_V	372_V	0.543	0.86
87_G	90_Y	0.542	0.85
175_A	325_V	0.540	0.85
363_T	372_V	0.540	0.85
74_S	326_M	0.540	0.85
449_K	452_A	0.539	0.85
350_S	353_M	0.537	0.85
260_Q	263_A	0.534	0.85
49_Y	204_P	0.534	0.85
127_N	338_S	0.533	0.85
281_Q	333_T	0.533	0.85
418_N	422_Y	0.531	0.84
126_V	279_I	0.531	0.84
36_F	54_I	0.530	0.84
302_F	306_L	0.529	0.84
189_D	192_T	0.528	0.84
399_L	403_Q	0.528	0.84
97_L	218_L	0.527	0.84
339_L	343_K	0.527	0.84
76_A	133_I	0.526	0.84
32_E	326_M	0.526	0.84
390_I	405_K	0.525	0.84
85_D	207_L	0.525	0.84
301_A	304_M	0.524	0.84
32_E	238_L	0.524	0.84
413_V	443_G	0.523	0.83
123_I	335_D	0.522	0.83
37_S	44_P	0.522	0.83
417_T	453_K	0.522	0.83
413_V	417_T	0.522	0.83
126_V	281_Q	0.522	0.83
176_I	179_M	0.522	0.83
32_E	36_F	0.521	0.83
118_P	433_L	0.521	0.83
16_R	19_I	0.520	0.83
232_G	236_S	0.519	0.83
386_S	390_I	0.518	0.83
267_T	275_G	0.518	0.83
175_A	183_A	0.518	0.83
72_T	129_L	0.518	0.83
183_A	195_D	0.517	0.83
62_G	70_A	0.517	0.83
223_P	438_V	0.517	0.83
338_S	353_M	0.516	0.83
68_I	72_T	0.516	0.83
150_A	425_D	0.515	0.82
237_L	243_I	0.515	0.82
384_K	438_V	0.515	0.82
63_G	77_V	0.514	0.82
127_N	334_F	0.512	0.82
40_A	48_L	0.512	0.82
27_L	128_A	0.512	0.82
35_G	39_I	0.511	0.82
73_G	326_M	0.510	0.82
61_F	255_K	0.510	0.82
46_V	271_G	0.510	0.82
191_R	196_M	0.509	0.82
131_I	366_L	0.509	0.82
89_Q	210_D	0.508	0.82
280_G	283_V	0.508	0.82
211_V	214_T	0.507	0.82
235_E	366_L	0.507	0.82
152_L	323_V	0.507	0.82
217_T	222_F	0.506	0.81
304_M	308_A	0.506	0.81
78_V	82_L	0.506	0.81
150_A	157_V	0.504	0.81
151_M	183_A	0.503	0.81
108_S	375_L	0.503	0.81
297_F	300_G	0.502	0.81
116_F	415_D	0.501	0.81
34_I	326_M	0.501	0.81
454_F	457_Q	0.501	0.81
178_V	458_G	0.500	0.81
279_I	333_T	0.500	0.81
235_E	278_M	0.500	0.81

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3qe7A	2	0.7699	100	0.612	Contact Map
3ny7A	1	0.2008	99.4	0.87	Contact Map
3oizA	1	0.1904	99.3	0.874	Contact Map
2klnA	1	0.1987	99.3	0.875	Contact Map
3lloA	1	0.2197	99.3	0.877	Contact Map
3zxnA	1	0.1883	99.2	0.88	Contact Map
4hylA	2	0.1946	99.2	0.881	Contact Map
4dghA	4	0.2071	99.2	0.881	Contact Map
4xs5A	1	0.1904	99.2	0.882	Contact Map
2ka5A	1	0.2113	99.2	0.882	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0128 seconds.