GREMLIN Database
YQIR - Putative sigma L-dependent transcriptional regulator YqiR
UniProt: P54529 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 692 (561)
Sequences: 706 (607)
Seq/√Len: 25.6

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
573_A577_L5.5881.00
458_E492_R5.4921.00
426_A479_A5.2651.00
441_E495_G4.8281.00
516_A521_T4.6951.00
397_E541_R4.5351.00
659_H669_A4.4121.00
403_E483_R4.3471.00
442_D451_G4.0901.00
462_N502_N3.8921.00
466_F508_A3.5811.00
515_K519_D3.5721.00
440_Y452_G3.5611.00
557_K590_E3.5201.00
570_S608_E3.5071.00
659_H666_T3.3901.00
442_D449_K3.3681.00
512_N515_K3.3491.00
554_L593_L3.3411.00
544_L581_H3.2511.00
551_S569_L3.0541.00
511_V516_A3.0211.00
434_E480_K2.9681.00
485_L505_V2.9651.00
457_F465_I2.8361.00
652_I677_L2.7350.99
465_I505_V2.7010.99
457_F503_V2.6960.99
430_E476_N2.6720.99
394_L537_I2.6660.99
183_N188_L2.6160.99
663_R678_Y2.5580.99
445_F448_A2.5340.99
250_S258_G2.5270.99
415_R502_N2.4490.99
134_D138_E2.4450.99
652_I681_M2.4330.99
378_A535_I2.3270.98
128_D216_K2.3260.98
394_L405_F2.3120.98
356_I359_L2.3080.98
178_R208_L2.3040.98
441_E492_R2.2830.98
400_T404_L2.2440.98
655_T666_T2.2430.98
390_A594_G2.2300.98
142_F157_V2.1940.97
663_R674_I2.1660.97
291_M302_V2.1570.97
461_N502_N2.1460.97
573_A609_K2.1410.97
672_V676_N2.1390.97
355_I360_E2.0630.96
662_N678_Y2.0580.96
645_E683_K2.0120.95
548_E578_S2.0080.95
355_I359_L1.9960.95
510_N529_R1.9720.95
674_I678_Y1.9700.95
457_F484_V1.9410.94
547_I551_S1.9210.94
443_G448_A1.9150.94
203_D207_R1.8690.93
471_G509_T1.8480.93
672_V677_L1.8350.93
457_F483_R1.8220.92
555_I597_M1.7930.92
440_Y445_F1.7890.92
443_G446_S1.7790.91
658_K669_A1.7560.91
558_I597_M1.7450.90
378_A382_A1.7290.90
458_E499_I1.7090.90
129_G215_F1.6990.89
484_V487_E1.6860.89
435_S445_F1.6850.89
440_Y449_K1.6830.89
261_I276_V1.6830.89
444_A448_A1.6820.89
652_I666_T1.6780.89
647_F651_L1.6770.89
663_R677_L1.6720.88
152_K157_V1.6560.88
544_L547_I1.6520.88
492_R495_G1.6440.88
403_E582_W1.6230.87
548_E574_L1.6230.87
491_V498_A1.6190.87
506_I672_V1.6160.87
142_F150_V1.6070.86
662_N674_I1.6070.86
490_I501_V1.5940.86
390_A598_I1.5900.86
648_E680_K1.5880.86
456_L491_V1.5870.86
437_L470_I1.5760.85
353_R359_L1.5700.85
558_I593_L1.5620.85
200_P210_G1.5620.85
369_I652_I1.5600.85
445_F469_E1.5500.84
515_K518_A1.5400.84
228_V231_L1.5370.84
248_A262_N1.5370.84
418_N462_N1.5280.83
483_R487_E1.5270.83
162_I169_T1.5110.83
222_V225_A1.4830.81
440_Y444_A1.4750.81
397_E539_P1.4680.81
567_K605_E1.4590.80
403_E486_Q1.4590.80
164_E169_T1.4580.80
446_S529_R1.4580.80
680_K684_Y1.4470.80
432_L435_S1.4460.80
652_I684_Y1.4450.80
656_L666_T1.4370.79
252_V332_S1.4370.79
384_L601_N1.4370.79
662_N677_L1.4350.79
582_W592_V1.4340.79
435_S443_G1.4340.79
644_V647_F1.4280.79
645_E684_Y1.4280.79
532_R594_G1.4250.79
405_F537_I1.4230.79
427_A510_N1.4130.78
649_A653_Q1.4050.78
382_A405_F1.3970.77
385_G533_Y1.3900.77
665_K668_K1.3870.77
486_Q595_R1.3860.77
129_G149_M1.3730.76
365_F382_A1.3600.75
676_N679_Y1.3580.75
547_I554_L1.3570.75
388_T598_I1.3550.75
651_L655_T1.3540.75
235_R239_E1.3480.75
432_L529_R1.3460.75
559_N565_N1.3450.75
432_L446_S1.3350.74
414_D535_I1.3300.74
469_E529_R1.3290.74
368_I408_A1.3270.74
338_D640_L1.3260.74
569_L574_L1.3220.73
536_S542_Q1.3180.73
554_L558_I1.3140.73
483_R489_E1.3140.73
248_A336_I1.3130.73
356_I360_E1.3050.72
569_L593_L1.2990.72
470_I473_L1.2970.72
674_I677_L1.2970.72
435_S508_A1.2860.71
172_P196_T1.2820.71
471_G529_R1.2740.70
675_R679_Y1.2720.70
348_E353_R1.2670.70
290_S295_V1.2660.70
426_A596_A1.2620.70
513_I522_F1.2570.69
664_T678_Y1.2530.69
365_F408_A1.2530.69
551_S593_L1.2530.69
492_R499_I1.2410.68
132_F197_T1.2400.68
555_I566_V1.2380.68
472_E510_N1.2370.68
222_V234_V1.2350.68
257_I280_P1.2330.68
426_A472_E1.2310.68
384_L533_Y1.2260.67
435_S446_S1.2220.67
292_H332_S1.2210.67
353_R356_I1.2190.67
184_Q188_L1.2080.66
162_I172_P1.2080.66
170_K174_I1.2070.66
449_K452_G1.1970.66
292_H320_V1.1960.65
126_T130_M1.1960.65
465_I484_V1.1910.65
440_Y443_G1.1900.65
385_G598_I1.1850.65
320_V332_S1.1850.65
546_D550_L1.1830.65
663_R681_M1.1800.64
471_G513_I1.1700.64
486_Q582_W1.1600.63
370_G375_M1.1580.63
492_R504_R1.1550.63
183_N186_Q1.1520.62
486_Q590_E1.1520.62
378_A405_F1.1470.62
656_L677_L1.1420.62
504_R594_G1.1410.62
539_P671_G1.1380.61
142_F147_E1.1340.61
272_S275_E1.1320.61
471_G483_R1.1270.61
469_E494_G1.1260.61
385_G535_I1.1240.61
442_D452_G1.1230.60
516_A519_D1.1150.60
591_N595_R1.1130.60
132_F141_L1.1120.60
446_S469_E1.1120.60
504_R532_R1.1110.60
492_R594_G1.1070.59
555_I559_N1.1060.59
664_T676_N1.1060.59
522_F526_L1.1050.59
446_S510_N1.1000.59
663_R676_N1.0990.59
389_P561_D1.0960.59
459_E492_R1.0960.59
379_L661_F1.0960.59
436_E440_Y1.0930.58
489_E498_A1.0890.58
666_T669_A1.0880.58
479_A524_E1.0860.58
185_K188_L1.0820.58
473_L638_E1.0710.57
425_C467_L1.0700.57
445_F468_D1.0690.57
471_G510_N1.0690.57
325_V328_I1.0670.56
131_I142_F1.0660.56
353_R394_L1.0660.56
256_G333_V1.0650.56
200_P214_V1.0640.56
149_M215_F1.0630.56
445_F529_R1.0550.56
368_I404_L1.0520.55
441_E458_E1.0490.55
469_E510_N1.0470.55
576_A609_K1.0430.55
238_L244_S1.0410.55
472_E516_A1.0390.54
139_I339_V1.0350.54
519_D672_V1.0340.54
444_A493_V1.0330.54
398_S529_R1.0330.54
656_L681_M1.0290.54
133_I211_A1.0270.54
196_T215_F1.0270.54
652_I665_K1.0220.53
427_A529_R1.0200.53
483_R529_R1.0200.53
397_E482_L1.0180.53
212_L216_K1.0170.53
216_K222_V1.0160.53
421_I499_I1.0150.53
677_L681_M1.0150.53
457_F510_N1.0100.52
282_N503_V1.0100.52
493_V551_S1.0070.52
181_E213_C1.0050.52
662_N681_M1.0040.52
253_D257_I1.0040.52
483_R486_Q1.0000.52
148_K157_V0.9990.52
227_E232_K0.9950.51
370_G546_D0.9940.51
286_S292_H0.9930.51
395_R514_E0.9920.51
639_K671_G0.9910.51
562_Y598_I0.9890.51
278_G327_G0.9890.51
262_N268_M0.9890.51
655_T669_A0.9830.50
586_V671_G0.9830.50
405_F662_N0.9820.50
457_F486_Q0.9780.50
187_L196_T0.9760.50
438_F455_G0.9750.50
436_E471_G0.9750.50
279_K283_T0.9740.50
531_N591_N0.9740.50
435_S529_R0.9730.50
468_D529_R0.9710.49
162_I173_R0.9660.49
442_D678_Y0.9640.49
162_I167_P0.9630.49
243_Q493_V0.9620.49
291_M320_V0.9610.49
531_N595_R0.9560.48
269_T320_V0.9550.48
406_A420_F0.9530.48
429_S432_L0.9520.48
440_Y453_K0.9520.48
275_E279_K0.9510.48
653_Q686_L0.9450.48
435_S447_G0.9440.47
547_I593_L0.9270.46
442_D450_R0.9250.46
435_S448_A0.9250.46
225_A229_T0.9230.46
258_G284_D0.9230.46
232_K683_K0.9190.46
170_K181_E0.9160.45
484_V523_R0.9120.45
135_I207_R0.9080.45
331_G335_V0.9080.45
459_E495_G0.9050.45
157_V685_G0.9040.45
127_H145_M0.9030.44
371_K376_L0.9000.44
413_S549_A0.8980.44
464_S532_R0.8960.44
661_F681_M0.8960.44
516_A580_Y0.8940.44
327_G575_R0.8860.43
441_E452_G0.8860.43
146_A217_D0.8830.43
432_L483_R0.8810.43
400_T505_V0.8760.43
661_F666_T0.8710.42
409_I493_V0.8710.42
349_L352_A0.8680.42
331_G400_T0.8670.42
440_Y528_Y0.8670.42
181_E198_R0.8660.42
446_S471_G0.8650.42
580_Y588_E0.8620.42
426_A434_E0.8620.42
212_L224_L0.8610.41
452_G678_Y0.8600.41
636_E658_K0.8570.41
654_Q657_E0.8520.41
398_S469_E0.8520.41
398_S445_F0.8500.41
659_H665_K0.8500.41
505_V552_V0.8490.41
161_P164_E0.8490.41
271_L276_V0.8460.40
576_A616_E0.8460.40
444_A447_G0.8460.40
354_Q359_L0.8450.40
455_G525_D0.8440.40
400_T426_A0.8420.40
374_Q542_Q0.8410.40
642_V650_H0.8410.40
174_I178_R0.8410.40
221_A225_A0.8400.40
502_N515_K0.8380.40
474_T676_N0.8360.40
648_E683_K0.8360.40
159_G169_T0.8360.40
527_Y558_I0.8350.40
279_K586_V0.8330.39
559_N566_V0.8330.39
447_G529_R0.8320.39
130_M216_K0.8310.39
266_T273_E0.8310.39
656_L663_R0.8310.39
423_V505_V0.8300.39
405_F452_G0.8290.39
432_L457_F0.8290.39
631_D635_I0.8290.39
320_V334_G0.8270.39
385_G392_I0.8270.39
217_D666_T0.8240.39
494_G525_D0.8210.39
568_G606_W0.8210.39
461_N501_V0.8200.39
370_G404_L0.8190.38
489_E514_E0.8160.38
120_D465_I0.8140.38
247_E337_H0.8130.38
430_E459_E0.8130.38
353_R360_E0.8110.38
160_R164_E0.8100.38
440_Y471_G0.8090.38
403_E487_E0.8080.38
576_A650_H0.8080.38
432_L523_R0.8080.38
270_G667_A0.8060.38
182_Y186_Q0.8040.37
388_T400_T0.8020.37
440_Y508_A0.8020.37
673_S677_L0.8010.37
170_K198_R0.7970.37
248_A492_R0.7970.37
447_G469_E0.7960.37
575_R579_A0.7940.37
483_R582_W0.7940.37
528_Y538_P0.7930.37
319_N335_V0.7930.37
559_N562_Y0.7920.37
459_E594_G0.7920.37
222_V231_L0.7910.37
265_Y334_G0.7910.37
370_G451_G0.7890.36
299_R324_I0.7850.36
573_A607_I0.7850.36
207_R520_G0.7850.36
242_I269_T0.7840.36
123_F516_A0.7810.36
147_E154_R0.7800.36
133_I213_C0.7800.36
275_E326_D0.7790.36
484_V490_I0.7790.36
391_T591_N0.7790.36
398_S510_N0.7780.36
166_I505_V0.7780.36
281_A334_G0.7770.36
390_A532_R0.7760.36
432_L467_L0.7760.36
530_I596_A0.7760.36
361_A411_N0.7760.36
392_I659_H0.7760.36
378_A612_L0.7740.35
432_L443_G0.7730.35
471_G522_F0.7690.35
487_E523_R0.7650.35
225_A234_V0.7650.35
242_I245_S0.7650.35
298_T302_V0.7640.35
253_D278_G0.7640.35
428_L655_T0.7640.35
221_A224_L0.7640.35
173_R181_E0.7620.35
329_L564_R0.7620.35
596_A611_H0.7600.34
544_L658_K0.7600.34
206_G462_N0.7580.34
200_P208_L0.7580.34
441_E453_K0.7580.34
139_I203_D0.7570.34
320_V325_V0.7560.34
318_V391_T0.7550.34
370_G379_L0.7550.34
445_F510_N0.7550.34
316_V388_T0.7540.34
586_V657_E0.7530.34
380_E616_E0.7520.34
571_Q660_H0.7520.34
472_E534_P0.7490.34
419_K473_L0.7480.34
607_I652_I0.7460.34
566_V663_R0.7460.34
433_L477_M0.7450.33
426_A432_L0.7440.33
400_T663_R0.7440.33
154_R501_V0.7440.33
374_Q588_E0.7440.33
436_E523_R0.7410.33
570_S606_W0.7400.33
427_A432_L0.7390.33
421_I574_L0.7390.33
440_Y493_V0.7380.33
465_I501_V0.7360.33
435_S440_Y0.7360.33
342_I345_L0.7350.33
138_E161_P0.7340.33
393_L522_F0.7330.33
521_T649_A0.7320.33
150_V227_E0.7320.33
638_E646_K0.7300.33
231_L234_V0.7290.32
460_A509_T0.7290.32
432_L445_F0.7290.32
455_G529_R0.7270.32
173_R196_T0.7270.32
476_N599_F0.7270.32
443_G468_D0.7270.32
532_R591_N0.7260.32
331_G596_A0.7260.32
352_A359_L0.7260.32
458_E504_R0.7260.32
432_L482_L0.7240.32
432_L510_N0.7230.32
375_M430_E0.7220.32
643_A651_L0.7210.32
468_D483_R0.7200.32
214_V217_D0.7190.32
465_I607_I0.7190.32
140_I185_K0.7170.32
534_P595_R0.7160.32
281_A286_S0.7150.32
174_I211_A0.7150.32
250_S325_V0.7120.31
385_G421_I0.7120.31
444_A509_T0.7110.31
314_K416_K0.7070.31
408_A596_A0.7070.31
421_I497_K0.7050.31
217_D222_V0.7050.31
243_Q263_K0.7020.31
403_E489_E0.7010.31
201_I456_L0.7010.31
327_G372_S0.6990.31
139_I157_V0.6990.31
174_I198_R0.6990.31
292_H334_G0.6960.30
443_G508_A0.6950.30
219_T253_D0.6930.30
472_E674_I0.6920.30
448_A510_N0.6920.30
242_I681_M0.6920.30
566_V596_A0.6920.30
503_V532_R0.6920.30
455_G523_R0.6910.30
159_G167_P0.6890.30
405_F586_V0.6880.30
494_G529_R0.6870.30
435_S494_G0.6860.30
169_T198_R0.6850.30
281_A285_I0.6840.30
398_S466_F0.6840.30
250_S269_T0.6830.30
133_I162_I0.6830.30
130_M200_P0.6830.30
657_E681_M0.6820.30
663_R673_S0.6810.29
133_I149_M0.6810.29
312_N621_E0.6800.29
291_M299_R0.6800.29
335_V340_S0.6790.29
448_A508_A0.6780.29
650_H653_Q0.6780.29
448_A469_E0.6780.29
202_I208_L0.6770.29
428_L445_F0.6770.29
429_S511_V0.6770.29
120_D350_N0.6760.29
331_G566_V0.6760.29
196_T213_C0.6760.29
131_I146_A0.6750.29
421_I486_Q0.6750.29
425_C494_G0.6730.29
482_L525_D0.6720.29
139_I155_E0.6720.29
370_G400_T0.6710.29
550_L553_R0.6710.29
472_E507_A0.6700.29
143_N480_K0.6690.29
214_V497_K0.6690.29
291_M305_V0.6690.29
226_E300_R0.6670.29
653_Q657_E0.6670.29
495_G499_I0.6650.28
247_E680_K0.6640.28
132_F137_E0.6630.28
130_M214_V0.6630.28
241_I325_V0.6620.28
477_M655_T0.6600.28
525_D587_R0.6600.28
648_E652_I0.6590.28
464_S546_D0.6590.28
184_Q187_L0.6580.28
461_N499_I0.6580.28
294_K582_W0.6580.28
640_L644_V0.6570.28
161_P636_E0.6570.28
443_G494_G0.6570.28
433_L473_L0.6560.28
284_D400_T0.6560.28
461_N512_N0.6560.28
263_K267_K0.6560.28
644_V651_L0.6560.28
156_E206_G0.6560.28
134_D168_S0.6540.28
440_Y450_R0.6540.28
372_S545_E0.6530.28
280_P539_P0.6520.28
218_I392_I0.6510.28
367_D659_H0.6510.28
433_L437_L0.6500.28
320_V390_A0.6500.28
278_G322_P0.6490.28
198_R265_Y0.6490.28
446_S464_S0.6490.28
160_R165_V0.6470.27
375_M641_S0.6470.27
187_L201_I0.6460.27
474_T574_L0.6460.27
435_S482_L0.6450.27
436_E494_G0.6450.27
446_S532_R0.6450.27
134_D140_I0.6450.27
347_A672_V0.6440.27
295_V298_T0.6440.27
653_Q661_F0.6430.27
464_S518_A0.6430.27
432_L448_A0.6420.27
234_V470_I0.6420.27
447_G510_N0.6420.27
179_V241_I0.6410.27
355_I358_T0.6410.27
250_S266_T0.6410.27
403_E457_F0.6400.27
518_A577_L0.6390.27
319_N332_S0.6380.27
219_T611_H0.6380.27
265_Y285_I0.6350.27
433_L483_R0.6350.27
170_K173_R0.6340.27
430_E434_E0.6340.27
618_E621_E0.6320.27
662_N665_K0.6310.26
256_G269_T0.6300.26
301_P306_R0.6300.26
424_N429_S0.6300.26
261_I490_I0.6300.26
393_L526_L0.6290.26
162_I168_S0.6290.26
436_E509_T0.6280.26
288_G292_H0.6280.26
398_S471_G0.6280.26
432_L447_G0.6270.26
239_E552_V0.6270.26
371_K649_A0.6270.26
252_V284_D0.6270.26
261_I265_Y0.6260.26
284_D287_E0.6260.26
260_L388_T0.6250.26
248_A675_R0.6250.26
153_K518_A0.6240.26
242_I562_Y0.6240.26
443_G510_N0.6240.26
256_G338_D0.6230.26
163_K168_S0.6230.26
438_F529_R0.6230.26
426_A566_V0.6230.26
445_F471_G0.6230.26
292_H674_I0.6220.26
156_E621_E0.6210.26
490_I498_A0.6210.26
454_K496_T0.6210.26
366_D567_K0.6200.26
182_Y188_L0.6200.26
387_K414_D0.6200.26
569_L631_D0.6190.26
238_L342_I0.6180.26
421_I458_E0.6180.26
455_G494_G0.6180.26
247_E385_G0.6170.26
440_Y494_G0.6170.26
403_E423_V0.6160.26
434_E445_F0.6160.26
440_Y448_A0.6160.26
294_K297_E0.6160.26
403_E468_D0.6150.26
137_E437_L0.6150.26
535_I595_R0.6150.26
370_G549_A0.6140.26
251_V472_E0.6140.26
352_A356_I0.6140.26
292_H325_V0.6130.25
426_A511_V0.6130.25
197_T497_K0.6130.25
437_L526_L0.6120.25
457_F487_E0.6120.25
435_S469_E0.6100.25
436_E522_F0.6090.25
406_A485_L0.6090.25
371_K549_A0.6090.25
456_L459_E0.6080.25
443_G469_E0.6070.25
421_I619_Q0.6070.25
526_L530_I0.6060.25
232_K505_V0.6060.25
247_E532_R0.6050.25
268_M318_V0.6050.25
391_T398_S0.6030.25
437_L474_T0.6030.25
269_T336_I0.6030.25
299_R320_V0.6020.25
383_K658_K0.6020.25
469_E587_R0.6010.25
252_V334_G0.5990.25
131_I139_I0.5970.25
452_G490_I0.5970.25
394_L451_G0.5960.25
328_I607_I0.5950.24
129_G194_I0.5940.24
457_F492_R0.5930.24
149_M153_K0.5930.24
436_E591_N0.5910.24
440_Y469_E0.5910.24
421_I468_D0.5910.24
271_L473_L0.5910.24
386_A588_E0.5910.24
144_H154_R0.5890.24
146_A215_F0.5890.24
661_F669_A0.5890.24
673_S676_N0.5880.24
269_T292_H0.5870.24
468_D494_G0.5860.24
384_L429_S0.5860.24
561_D594_G0.5850.24
398_S663_R0.5840.24
140_I559_N0.5840.24
403_E408_A0.5830.24
398_S586_V0.5830.24
441_E444_A0.5820.24
136_N614_V0.5820.24
182_Y187_L0.5810.24
245_S335_V0.5780.24
494_G523_R0.5770.24
498_A655_T0.5770.24
185_K189_G0.5770.24
363_Y677_L0.5760.23
213_C218_I0.5750.23
421_I492_R0.5750.23
383_K502_N0.5740.23
518_A563_G0.5730.23
446_S508_A0.5730.23
581_H660_H0.5730.23
241_I252_V0.5730.23
258_G280_P0.5730.23
201_I646_K0.5720.23
370_G408_A0.5710.23
385_G493_V0.5700.23
296_L329_L0.5700.23
145_M474_T0.5690.23
374_Q505_V0.5690.23
487_E591_N0.5680.23
176_K369_I0.5670.23
155_E194_I0.5670.23
427_A494_G0.5670.23
570_S573_A0.5670.23
566_V677_L0.5660.23
205_G633_P0.5660.23
475_Q511_V0.5660.23
489_E500_P0.5650.23
681_M684_Y0.5650.23
667_A674_I0.5640.23
475_Q513_I0.5640.23
398_S427_A0.5630.23
269_T456_L0.5630.23
240_A665_K0.5620.23
427_A435_S0.5610.23
123_F216_K0.5600.23
472_E509_T0.5600.23
148_K161_P0.5600.23
436_E455_G0.5590.23
323_V618_E0.5590.23
477_M484_V0.5570.22
205_G527_Y0.5560.22
133_I175_L0.5550.22
253_D331_G0.5550.22
318_V477_M0.5540.22
368_I380_E0.5540.22
576_A685_G0.5520.22
483_R523_R0.5520.22
449_K470_I0.5510.22
655_T659_H0.5510.22
407_H411_N0.5500.22
664_T682_D0.5500.22
424_N528_Y0.5490.22
329_L551_S0.5490.22
145_M148_K0.5490.22
250_S292_H0.5490.22
664_T674_I0.5480.22
311_P593_L0.5470.22
208_L684_Y0.5460.22
119_Y222_V0.5460.22
424_N546_D0.5450.22
330_K681_M0.5450.22
448_A468_D0.5450.22
198_R213_C0.5440.22
261_I287_E0.5440.22
226_E681_M0.5440.22
406_A524_E0.5430.22
568_G681_M0.5420.22
663_R675_R0.5410.22
440_Y679_Y0.5410.22
146_A244_S0.5410.22
291_M294_K0.5400.22
333_V534_P0.5380.22
260_L554_L0.5380.22
545_E637_G0.5370.21
483_R525_D0.5370.21
440_Y446_S0.5360.21
165_V187_L0.5350.21
373_E518_A0.5350.21
660_H685_G0.5340.21
310_G316_V0.5330.21
413_S536_S0.5310.21
447_G582_W0.5310.21
598_I679_Y0.5300.21
494_G510_N0.5300.21
171_M198_R0.5290.21
170_K196_T0.5290.21
588_E595_R0.5290.21
451_G656_L0.5280.21
209_L262_N0.5270.21
186_Q194_I0.5270.21
440_Y529_R0.5270.21
433_L491_V0.5270.21
120_D672_V0.5250.21
445_F452_G0.5250.21
488_K561_D0.5250.21
640_L643_A0.5240.21
427_A443_G0.5240.21
129_G409_I0.5240.21
435_S453_K0.5220.21
121_R133_I0.5210.21
207_R502_N0.5200.21
420_F680_K0.5200.21
519_D638_E0.5190.21
259_L669_A0.5190.21
422_R465_I0.5180.21
510_N525_D0.5180.21
128_D199_L0.5170.21
533_Y577_L0.5170.21
457_F468_D0.5170.21
200_P211_A0.5160.20
372_S398_S0.5150.20
405_F473_L0.5140.20
426_A592_V0.5130.20
260_L679_Y0.5120.20
513_I681_M0.5110.20
134_D277_I0.5110.20
482_L541_R0.5110.20
471_G508_A0.5100.20
443_G447_G0.5100.20
250_S261_I0.5090.20
170_K175_L0.5090.20
374_Q473_L0.5080.20
447_G471_G0.5080.20
287_E332_S0.5080.20
607_I665_K0.5070.20
162_I171_M0.5070.20
388_T673_S0.5060.20
201_I654_Q0.5060.20
277_I473_L0.5050.20
580_Y592_V0.5050.20
353_R357_R0.5030.20
539_P602_P0.5020.20
294_K298_T0.5020.20
436_E525_D0.5010.20
278_G288_G0.5010.20
218_I556_Q0.5000.20
216_K220_D0.5000.20
316_V389_P0.5000.20
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
4l4uA 2 0.5072 100 0.529 Contact Map
1ojlA 3 0.435 100 0.638 Contact Map
3dzdA 2 0.526 100 0.64 Contact Map
4fwgA 3 0.4827 100 0.744 Contact Map
4qhsA 3 0.3526 100 0.787 Contact Map
4qosA 1 0.3468 100 0.788 Contact Map
1r6bX 1 0.7197 100 0.797 Contact Map
1qvrA 3 0.7341 100 0.8 Contact Map
4ciuA 1 0.7746 100 0.81 Contact Map
4d2uA 3 0.7514 100 0.81 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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