EX7L - BACSU - GREMLIN Contacts

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EX7L - Exodeoxyribonuclease 7 large subunit

UniProt:	P54521	Sequences: MGEAAYVTVSALTKYIKRKFDVDPHLENIWIKGELSNVKIHTRGHIYFTLKDENARMQSVMFARQSERLPFKPENGMKVLVRGGISVYEPSGNYQLYAKEMQPDGVGALYLAYEELKKKLAGEGLFDDRYKKQIPAFPATIGVVTSPTGAAVRDVITTLKRRYPLVKVIVLPALVQGENASRSIVTRIEEANEKEICDVLIVGRGGGSIEELWAFNEEIVARAIFASNIPIISAVGHETDFTISDFVADIRAATPTGAAEIAVPHTTDLIERTKTAEVRMTRAMQQHLGQKKERIQTLQSSYAFRFPKRLYAQKEQQFDLAYQQFQAQLTALLDRKSRQLERETYRLEALHPHEQLKQARTRYQEQTNQLRKNMNIQMKQLHSQFQTVLGKLNALSPLQVMERGYSLAYKEDKLIKSVSQIEEQDRLEIKLKDGVLTCEVLEKRGEEK	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	448 (385)
Sequences:	2548 (1911)
Seq/√Len:	97.4

ECOLI - EX7L
BACSU - EX7L

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
192_N	227_S	5.319	1.00
224_I	244_S	4.656	1.00
123_E	222_R	4.610	1.00
130_Y	225_F	4.575	1.00
221_A	243_I	4.217	1.00
174_L	183_S	4.093	1.00
232_I	262_A	3.543	1.00
158_T	256_T	3.429	1.00
192_N	229_I	3.406	1.00
332_L	336_K	3.222	1.00
140_T	167_K	3.219	1.00
192_N	228_N	3.178	1.00
180_A	214_A	3.086	1.00
143_V	155_V	2.947	1.00
118_K	122_G	2.895	1.00
35_L	38_V	2.823	1.00
181_S	217_E	2.806	1.00
125_L	222_R	2.799	1.00
73_P	101_M	2.750	1.00
287_H	291_K	2.711	1.00
185_V	220_V	2.615	1.00
217_E	220_V	2.554	1.00
188_I	200_L	2.524	1.00
173_A	184_I	2.518	1.00
189_E	226_A	2.503	1.00
377_Q	381_L	2.457	1.00
114_E	118_K	2.422	1.00
224_I	231_I	2.415	1.00
185_V	219_I	2.366	1.00
142_G	197_C	2.348	1.00
74_E	77_M	2.348	1.00
155_V	203_G	2.337	1.00
48_F	98_A	2.322	1.00
58_Q	93_N	2.303	1.00
142_G	200_L	2.273	1.00
241_F	246_F	2.245	1.00
16_I	87_V	2.198	1.00
191_A	200_L	2.176	1.00
221_A	247_V	2.167	1.00
59_S	98_A	2.134	1.00
155_V	201_I	2.078	1.00
46_I	66_S	2.077	1.00
134_I	250_I	2.020	1.00
184_I	220_V	2.015	1.00
38_V	46_I	1.988	1.00
119_K	218_E	1.987	1.00
188_I	202_V	1.937	1.00
142_G	191_A	1.927	1.00
203_G	234_A	1.920	1.00
250_I	261_I	1.905	1.00
199_V	262_A	1.895	1.00
173_A	187_R	1.860	1.00
159_L	168_V	1.849	1.00
253_A	257_G	1.820	1.00
156_I	168_V	1.806	1.00
201_I	262_A	1.804	1.00
316_Q	319_D	1.753	1.00
15_Y	23_D	1.748	1.00
14_K	89_E	1.719	1.00
336_K	339_Q	1.701	1.00
60_V	95_Q	1.691	1.00
151_A	239_T	1.682	1.00
161_R	260_E	1.674	1.00
173_A	183_S	1.658	1.00
49_T	56_R	1.647	1.00
40_I	72_K	1.646	1.00
143_V	168_V	1.639	1.00
220_V	223_A	1.622	1.00
358_Q	361_T	1.612	1.00
13_T	94_Y	1.607	1.00
111_L	115_E	1.586	1.00
81_V	101_M	1.585	1.00
86_S	97_Y	1.583	1.00
83_G	96_L	1.526	1.00
182_R	219_I	1.517	1.00
140_T	169_I	1.505	1.00
108_A	112_A	1.484	1.00
30_W	82_R	1.480	1.00
163_Y	264_P	1.477	1.00
171_L	194_K	1.455	1.00
225_F	247_V	1.443	1.00
355_Q	359_A	1.442	1.00
181_S	219_I	1.430	1.00
185_V	217_E	1.429	1.00
203_G	235_V	1.402	0.99
35_L	79_V	1.399	0.99
121_A	127_D	1.390	0.99
151_A	203_G	1.388	0.99
218_E	222_R	1.386	0.99
32_K	78_K	1.384	0.99
188_I	231_I	1.373	0.99
138_P	141_I	1.361	0.99
149_G	152_V	1.355	0.99
265_H	268_D	1.349	0.99
200_L	227_S	1.341	0.99
84_G	99_K	1.331	0.99
37_N	75_N	1.324	0.99
238_E	251_R	1.322	0.99
189_E	193_E	1.321	0.99
15_Y	26_L	1.313	0.99
169_I	197_C	1.311	0.99
171_L	197_C	1.309	0.99
174_L	179_N	1.306	0.99
185_V	188_I	1.300	0.99
140_T	197_C	1.300	0.99
171_L	191_A	1.299	0.99
87_V	94_Y	1.299	0.99
179_N	182_R	1.299	0.99
31_I	96_L	1.283	0.99
82_R	100_E	1.282	0.99
7_V	12_L	1.274	0.99
132_K	228_N	1.274	0.99
81_V	98_A	1.264	0.99
209_I	213_W	1.258	0.99
166_V	263_V	1.257	0.99
115_E	119_K	1.256	0.99
250_I	253_A	1.254	0.99
180_A	184_I	1.244	0.99
141_I	199_V	1.238	0.99
30_W	80_L	1.233	0.99
46_I	69_L	1.231	0.99
13_T	16_I	1.227	0.99
359_A	362_R	1.224	0.99
381_L	384_Q	1.222	0.99
184_I	202_V	1.222	0.99
35_L	101_M	1.218	0.99
119_K	123_E	1.211	0.98
60_V	97_Y	1.207	0.98
71_F	101_M	1.191	0.98
391_K	394_A	1.178	0.98
12_L	85_I	1.171	0.98
163_Y	166_V	1.167	0.98
39_K	75_N	1.164	0.98
135_P	199_V	1.162	0.98
102_Q	108_A	1.162	0.98
324_Q	328_Q	1.161	0.98
17_K	89_E	1.160	0.98
266_T	270_I	1.157	0.98
147_P	152_V	1.152	0.98
142_G	171_L	1.144	0.98
188_I	220_V	1.140	0.98
365_E	369_Q	1.135	0.98
272_R	276_A	1.134	0.98
188_I	227_S	1.132	0.98
117_K	246_F	1.129	0.98
186_T	189_E	1.124	0.98
243_I	247_V	1.123	0.98
7_V	15_Y	1.115	0.97
138_P	264_P	1.112	0.97
123_E	218_E	1.109	0.97
113_Y	246_F	1.108	0.97
144_V	202_V	1.102	0.97
372_K	376_I	1.094	0.97
114_E	117_K	1.094	0.97
115_E	118_K	1.092	0.97
153_R	156_I	1.082	0.97
113_Y	243_I	1.081	0.97
12_L	57_M	1.079	0.97
202_V	233_S	1.072	0.97
141_I	159_L	1.064	0.97
306_F	309_R	1.064	0.97
129_R	225_F	1.064	0.97
71_F	103_P	1.060	0.96
61_M	101_M	1.055	0.96
346_R	350_L	1.053	0.96
291_K	294_R	1.051	0.96
369_Q	373_N	1.049	0.96
118_K	121_A	1.049	0.96
73_P	77_M	1.044	0.96
134_I	232_I	1.040	0.96
61_M	66_S	1.040	0.96
57_M	96_L	1.035	0.96
282_R	286_Q	1.027	0.96
181_S	214_A	1.025	0.96
376_I	379_K	1.021	0.96
63_A	67_E	1.019	0.96
38_V	73_P	1.018	0.96
16_I	94_Y	1.005	0.95
144_V	173_A	1.005	0.95
338_R	342_R	0.999	0.95
387_T	390_G	0.999	0.95
195_E	229_I	0.991	0.95
103_P	111_L	0.987	0.95
41_H	148_T	0.984	0.95
61_M	71_F	0.982	0.95
320_L	327_A	0.979	0.94
17_K	23_D	0.979	0.94
222_R	226_A	0.978	0.94
65_Q	99_K	0.975	0.94
385_F	389_L	0.974	0.94
59_S	96_L	0.972	0.94
188_I	224_I	0.969	0.94
310_L	314_K	0.964	0.94
331_A	335_R	0.961	0.94
109_L	213_W	0.961	0.94
184_I	188_I	0.960	0.94
79_V	101_M	0.957	0.94
317_Q	321_A	0.952	0.94
331_A	334_D	0.950	0.94
162_R	260_E	0.950	0.94
125_L	218_E	0.949	0.94
362_R	366_Q	0.948	0.93
112_A	115_E	0.948	0.93
112_A	116_L	0.944	0.93
8_T	11_A	0.939	0.93
57_M	83_G	0.939	0.93
293_E	296_Q	0.935	0.93
213_W	217_E	0.935	0.93
161_R	257_G	0.933	0.93
200_L	229_I	0.929	0.93
134_I	199_V	0.928	0.93
157_T	161_R	0.927	0.93
278_V	282_R	0.923	0.93
181_S	185_V	0.923	0.93
35_L	59_S	0.922	0.93
10_S	54_N	0.920	0.92
10_S	55_A	0.919	0.92
227_S	231_I	0.918	0.92
189_E	223_A	0.913	0.92
40_I	46_I	0.911	0.92
61_M	69_L	0.908	0.92
309_R	312_A	0.907	0.92
85_I	94_Y	0.902	0.92
329_L	332_L	0.900	0.92
343_E	346_R	0.898	0.92
157_T	253_A	0.897	0.91
144_V	187_R	0.896	0.91
327_A	331_A	0.891	0.91
57_M	94_Y	0.888	0.91
217_E	223_A	0.887	0.91
323_Q	327_A	0.887	0.91
144_V	191_A	0.886	0.91
42_T	148_T	0.886	0.91
106_V	110_Y	0.886	0.91
16_I	57_M	0.885	0.91
103_P	115_E	0.885	0.91
151_A	156_I	0.884	0.91
223_A	227_S	0.884	0.91
202_V	234_A	0.880	0.91
233_S	244_S	0.877	0.91
139_A	167_K	0.877	0.91
185_V	189_E	0.875	0.90
188_I	192_N	0.872	0.90
279_R	283_A	0.872	0.90
171_L	190_E	0.872	0.90
61_M	98_A	0.866	0.90
159_L	263_V	0.860	0.90
23_D	26_L	0.860	0.90
110_Y	114_E	0.859	0.90
308_K	312_A	0.858	0.90
371_R	375_N	0.856	0.89
13_T	87_V	0.851	0.89
32_K	104_D	0.847	0.89
185_V	223_A	0.847	0.89
374_M	378_M	0.846	0.89
12_L	31_I	0.840	0.89
141_I	166_V	0.836	0.88
149_G	234_A	0.833	0.88
163_Y	269_L	0.830	0.88
38_V	66_S	0.828	0.88
153_R	239_T	0.827	0.88
354_E	357_K	0.827	0.88
77_M	103_P	0.823	0.88
360_R	364_Q	0.822	0.87
199_V	232_I	0.812	0.87
194_K	197_C	0.812	0.87
147_P	172_P	0.811	0.87
164_P	264_P	0.809	0.87
125_L	225_F	0.809	0.87
142_G	169_I	0.805	0.86
147_P	153_R	0.803	0.86
366_Q	369_Q	0.801	0.86
354_E	358_Q	0.795	0.86
36_S	51_K	0.795	0.86
314_K	317_Q	0.795	0.86
20_F	87_V	0.789	0.85
334_D	338_R	0.785	0.85
173_A	191_A	0.779	0.85
43_R	63_A	0.778	0.84
151_A	155_V	0.778	0.84
156_I	170_V	0.777	0.84
88_Y	91_S	0.776	0.84
39_K	42_T	0.776	0.84
380_Q	383_S	0.776	0.84
359_A	363_Y	0.776	0.84
57_M	85_I	0.774	0.84
140_T	196_I	0.770	0.84
153_R	157_T	0.765	0.83
41_H	97_Y	0.763	0.83
362_R	365_E	0.760	0.83
367_T	371_R	0.760	0.83
330_T	334_D	0.758	0.83
190_E	194_K	0.758	0.83
159_L	259_A	0.757	0.83
35_L	73_P	0.757	0.83
81_V	96_L	0.755	0.83
28_N	82_R	0.753	0.82
213_W	216_N	0.752	0.82
108_A	111_L	0.752	0.82
69_L	101_M	0.748	0.82
383_S	387_T	0.746	0.82
132_K	227_S	0.745	0.82
202_V	220_V	0.744	0.82
187_R	191_A	0.744	0.82
292_K	337_S	0.743	0.82
361_T	365_E	0.742	0.82
197_C	200_L	0.739	0.81
82_R	99_K	0.738	0.81
253_A	256_T	0.738	0.81
56_R	91_S	0.736	0.81
64_R	67_E	0.735	0.81
191_A	197_C	0.735	0.81
233_S	245_D	0.733	0.81
37_N	49_T	0.732	0.81
161_R	261_I	0.731	0.81
6_Y	80_L	0.729	0.80
316_Q	320_L	0.728	0.80
109_L	209_I	0.727	0.80
152_V	156_I	0.725	0.80
368_N	372_K	0.724	0.80
150_A	239_T	0.721	0.80
48_F	59_S	0.720	0.80
151_A	170_V	0.718	0.79
13_T	92_G	0.716	0.79
284_M	291_K	0.715	0.79
173_A	220_V	0.712	0.79
113_Y	117_K	0.710	0.79
309_R	313_Q	0.708	0.78
7_V	11_A	0.707	0.78
276_A	280_M	0.705	0.78
83_G	94_Y	0.702	0.78
390_G	394_A	0.701	0.78
120_L	221_A	0.697	0.77
195_E	228_N	0.693	0.77
56_R	93_N	0.693	0.77
337_S	341_E	0.693	0.77
30_W	100_E	0.692	0.77
44_G	63_A	0.691	0.77
165_L	266_T	0.688	0.76
16_I	20_F	0.688	0.76
384_Q	388_V	0.688	0.76
15_Y	19_K	0.687	0.76
305_R	310_L	0.685	0.76
284_M	288_L	0.684	0.76
56_R	211_E	0.681	0.76
43_R	95_Q	0.681	0.76
55_A	89_E	0.680	0.76
117_K	221_A	0.678	0.75
293_E	297_T	0.678	0.75
39_K	66_S	0.678	0.75
280_M	325_F	0.674	0.75
320_L	323_Q	0.674	0.75
381_L	385_F	0.672	0.75
156_I	159_L	0.671	0.75
48_F	61_M	0.671	0.75
389_L	392_L	0.670	0.75
169_I	196_I	0.670	0.75
36_S	49_T	0.667	0.74
364_Q	371_R	0.667	0.74
50_L	81_V	0.666	0.74
143_V	152_V	0.666	0.74
43_R	315_E	0.664	0.74
158_T	239_T	0.664	0.74
137_F	269_L	0.663	0.74
39_K	148_T	0.661	0.74
169_I	194_K	0.660	0.73
49_T	58_Q	0.659	0.73
114_E	121_A	0.658	0.73
296_Q	299_Q	0.655	0.73
268_D	271_E	0.654	0.73
286_Q	289_G	0.652	0.73
365_E	368_N	0.652	0.73
233_S	248_A	0.652	0.73
183_S	187_R	0.651	0.72
387_T	391_K	0.651	0.72
8_T	94_Y	0.651	0.72
13_T	55_A	0.650	0.72
70_P	112_A	0.649	0.72
292_K	296_Q	0.648	0.72
234_A	244_S	0.645	0.72
171_L	200_L	0.643	0.72
113_Y	216_N	0.642	0.71
187_R	190_E	0.639	0.71
41_H	56_R	0.636	0.71
19_K	23_D	0.635	0.71
155_V	259_A	0.635	0.71
202_V	244_S	0.635	0.71
335_R	338_R	0.635	0.71
58_Q	91_S	0.634	0.70
182_R	186_T	0.634	0.70
320_L	324_Q	0.633	0.70
132_K	247_V	0.632	0.70
82_R	102_Q	0.632	0.70
382_H	386_Q	0.631	0.70
33_G	59_S	0.629	0.70
266_T	269_L	0.625	0.69
141_I	262_A	0.625	0.69
117_K	126_F	0.623	0.69
147_P	170_V	0.623	0.69
209_I	239_T	0.623	0.69
360_R	368_N	0.621	0.69
175_V	215_F	0.621	0.69
389_L	393_N	0.621	0.69
297_T	300_S	0.621	0.69
137_F	163_Y	0.621	0.69
351_H	354_E	0.620	0.69
202_V	231_I	0.620	0.69
144_V	188_I	0.618	0.68
158_T	253_A	0.618	0.68
46_I	73_P	0.617	0.68
116_L	119_K	0.615	0.68
132_K	225_F	0.614	0.68
363_Y	366_Q	0.613	0.68
157_T	256_T	0.612	0.68
358_Q	362_R	0.612	0.68
379_K	386_Q	0.612	0.68
29_I	83_G	0.612	0.68
285_Q	289_G	0.610	0.68
366_Q	374_M	0.609	0.67
355_Q	382_H	0.608	0.67
17_K	86_S	0.607	0.67
163_Y	263_V	0.607	0.67
275_T	278_V	0.604	0.67
294_R	298_L	0.603	0.67
90_P	97_Y	0.603	0.67
61_M	97_Y	0.602	0.66
264_P	269_L	0.601	0.66
153_R	170_V	0.601	0.66
80_L	102_Q	0.601	0.66
109_L	113_Y	0.600	0.66
50_L	79_V	0.600	0.66
364_Q	368_N	0.599	0.66
290_Q	294_R	0.599	0.66
23_D	97_Y	0.598	0.66
148_T	152_V	0.598	0.66
166_V	262_A	0.596	0.66
103_P	110_Y	0.595	0.66
11_A	15_Y	0.595	0.66
349_A	354_E	0.594	0.65
197_C	229_I	0.594	0.65
315_E	319_D	0.593	0.65
151_A	234_A	0.591	0.65
34_E	107_G	0.591	0.65
315_E	337_S	0.589	0.65
201_I	232_I	0.589	0.65
286_Q	290_Q	0.588	0.65
375_N	383_S	0.585	0.64
178_E	182_R	0.585	0.64
65_Q	68_R	0.585	0.64
386_Q	389_L	0.585	0.64
20_F	85_I	0.584	0.64
291_K	336_K	0.582	0.64
90_P	94_Y	0.581	0.64
271_E	275_T	0.580	0.64
342_R	345_Y	0.580	0.64
192_N	223_A	0.580	0.64
174_L	182_R	0.579	0.63
15_Y	25_H	0.579	0.63
86_S	96_L	0.578	0.63
252_A	261_I	0.578	0.63
360_R	375_N	0.578	0.63
144_V	200_L	0.577	0.63
315_E	318_F	0.576	0.63
136_A	272_R	0.575	0.63
28_N	83_G	0.574	0.63
39_K	60_V	0.574	0.63
147_P	156_I	0.573	0.63
274_K	277_E	0.573	0.63
131_K	249_D	0.571	0.62
224_I	243_I	0.571	0.62
182_R	185_V	0.570	0.62
378_M	386_Q	0.570	0.62
19_K	24_P	0.570	0.62
142_G	202_V	0.569	0.62
362_R	376_I	0.569	0.62
192_N	231_I	0.569	0.62
112_A	119_K	0.565	0.62
171_L	196_I	0.564	0.61
322_Y	326_Q	0.563	0.61
142_G	155_V	0.563	0.61
137_F	165_L	0.561	0.61
378_M	382_H	0.560	0.61
45_H	62_F	0.560	0.61
110_Y	256_T	0.559	0.61
110_Y	113_Y	0.559	0.61
162_R	258_A	0.558	0.61
318_F	321_A	0.557	0.61
149_G	203_G	0.557	0.61
13_T	19_K	0.556	0.60
203_G	233_S	0.556	0.60
291_K	298_L	0.555	0.60
338_R	341_E	0.555	0.60
110_Y	209_I	0.554	0.60
368_N	371_R	0.553	0.60
116_L	218_E	0.552	0.60
175_V	180_A	0.551	0.60
110_Y	158_T	0.549	0.59
151_A	191_A	0.549	0.59
329_L	333_L	0.549	0.59
308_K	313_Q	0.549	0.59
158_T	257_G	0.549	0.59
252_A	258_A	0.547	0.59
386_Q	390_G	0.547	0.59
149_G	172_P	0.545	0.59
383_S	386_Q	0.545	0.59
211_E	238_E	0.544	0.59
16_I	85_I	0.543	0.59
132_K	231_I	0.540	0.58
378_M	387_T	0.540	0.58
361_T	364_Q	0.539	0.58
175_V	184_I	0.539	0.58
30_W	102_Q	0.539	0.58
340_L	343_E	0.538	0.58
36_S	75_N	0.536	0.58
313_Q	316_Q	0.535	0.57
34_E	51_K	0.534	0.57
348_E	368_N	0.534	0.57
363_Y	367_T	0.533	0.57
51_K	210_E	0.533	0.57
87_V	95_Q	0.533	0.57
120_L	222_R	0.533	0.57
46_I	61_M	0.532	0.57
277_E	281_T	0.531	0.57
272_R	275_T	0.530	0.57
257_G	260_E	0.529	0.57
358_Q	384_Q	0.529	0.57
70_P	102_Q	0.529	0.57
5_A	11_A	0.528	0.57
7_V	320_L	0.527	0.56
138_P	163_Y	0.527	0.56
194_K	229_I	0.527	0.56
297_T	301_S	0.526	0.56
41_H	44_G	0.526	0.56
203_G	239_T	0.526	0.56
69_L	73_P	0.526	0.56
356_L	360_R	0.525	0.56
355_Q	369_Q	0.523	0.56
336_K	340_L	0.520	0.55
239_T	242_T	0.520	0.55
41_H	84_G	0.519	0.55
152_V	170_V	0.518	0.55
376_I	391_K	0.516	0.55
146_S	151_A	0.515	0.55
91_S	211_E	0.514	0.55
388_V	391_K	0.513	0.54
356_L	359_A	0.513	0.54
31_I	57_M	0.512	0.54
253_A	261_I	0.512	0.54
357_K	365_E	0.512	0.54
138_P	199_V	0.512	0.54
27_E	30_W	0.511	0.54
40_I	66_S	0.511	0.54
282_R	346_R	0.511	0.54
315_E	322_Y	0.511	0.54
121_A	128_D	0.509	0.54
158_T	201_I	0.509	0.54
38_V	75_N	0.508	0.54
357_K	389_L	0.508	0.54
209_I	242_T	0.506	0.53
379_K	383_S	0.506	0.53
31_I	81_V	0.504	0.53
244_S	248_A	0.504	0.53
271_E	278_V	0.504	0.53
191_A	229_I	0.504	0.53
43_R	60_V	0.504	0.53
155_V	257_G	0.503	0.53
113_Y	213_W	0.503	0.53
6_Y	11_A	0.503	0.53
149_G	163_Y	0.502	0.53
71_F	115_E	0.502	0.53
11_A	19_K	0.502	0.53
214_A	217_E	0.502	0.53
273_T	276_A	0.501	0.53
265_H	271_E	0.501	0.53
199_V	229_I	0.501	0.53
357_K	371_R	0.500	0.53
162_R	252_A	0.500	0.53
170_V	203_G	0.500	0.53

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4gnxB	1	0.25	99.5	0.887	Contact Map
4joiA	1	0.2768	98.6	0.922	Contact Map
3kdfD	2	0.25	97.7	0.94	Contact Map
3dm3A	4	0.1897	96.6	0.949	Contact Map
3e0eA	1	0.1853	96.4	0.95	Contact Map
3au7A	1	0.2969	96.4	0.95	Contact Map
3kf6A	1	0.2812	96.3	0.951	Contact Map
2hpiA	2	0.317	95.9	0.953	Contact Map
1o7iA	1	0.2299	95.7	0.953	Contact Map
2pi2A	1	0.2679	94.4	0.957	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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