YQHH - BACSU - GREMLIN Contacts

Home
GREMLIN
- Submit - Monomer
- Submit - Complex
Contacts
Metagenomics
- Contacts
- Structures
Structures
- List
Old Projects
- Complexes (2014)
- PFAM (2013)

YQHH - Uncharacterized ATP-dependent helicase YqhH

UniProt:	P54509	Sequences: MNTEMIYDAKWPEEFAERLKNDGPWANWELYKLSAEIQKTLAIPEFEGLRAPLYLPSFTPLPHQLEVAQKVVEKMNGKAILADEVGLGKTVEAGLILKEYMIRGLAKKILILVPASLVSQWVKELQEKFLIPAVEQKKSYVWEQCDIVVSSIDTAKRSPHREIVLSIPYDLVIIDEAHKLKNSKTKNYEFVRNLVKKYCLLLTATPIQNRIEEIFNLVSLLKPGHLGSQNHFQEEFAKKKSSLEAHEHLKDLVNKVMIRNRRHDTGLNWKQRHVETVPIQFSPSEQALYDEISRLKDSINKPASMFSIMTLQRECCSSREAVYMTLKKMLDQKEKQAPAIDEDTISVLIDRINQVTQNSKALQVVDLIKKIDDKVIIFTEYRATQIYLQWFLQQNGISSVPFRGGFKRGKKDWMKDLFRGKIQVLIATEAGGEGINLQFCNHMINYDLPWNPMRLEQRIGRIHRLGQERDVHIYNMATKHTVEEHILKLLYEKIHLFEKVVGELDDILTKIQVNNFEEHLHDILYHSATEEEMKIKMDNLTSFLSYKKQLPAEKRGS	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	557 (454)
Sequences:	13327 (8720)
Seq/√Len:	409.2

ECOLI - RAPA DEAD YEJH RECG RECQ YFJK SRMB
BACSU - YQHH YWQA RECS RECG RECQ YPRA DBPA CSHA CSHB
HALSA - O52003 Q9HMW5 O51997 RAD25 Q9HNB2 Q9HN80
SULSO - Q97XQ7 Q97X74 Q97ZF9 Q97ZV2 Q981C8

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
94_G	125_L	4.089	1.00
280_Q	479_K	3.880	1.00
177_A	201_L	3.690	1.00
388_L	446_Y	3.348	1.00
185_T	188_Y	3.278	1.00
419_R	439_F	3.243	1.00
363_Q	366_D	3.224	1.00
410_K	413_W	3.212	1.00
373_D	441_N	3.114	1.00
389_Q	393_Q	2.976	1.00
67_V	92_E	2.894	1.00
97_L	109_I	2.852	1.00
369_K	395_N	2.808	1.00
443_M	462_I	2.797	1.00
120_Q	436_N	2.789	1.00
273_H	470_D	2.722	1.00
389_Q	401_P	2.688	1.00
413_W	417_L	2.676	1.00
125_L	147_I	2.668	1.00
271_Q	470_D	2.643	1.00
93_A	173_I	2.626	1.00
412_D	416_D	2.605	1.00
400_V	417_L	2.584	1.00
93_A	202_L	2.557	1.00
72_V	99_E	2.475	1.00
386_I	401_P	2.431	1.00
122_V	126_Q	2.417	1.00
407_K	410_K	2.388	1.00
389_Q	399_S	2.310	1.00
445_N	459_I	2.299	1.00
376_I	462_I	2.293	1.00
379_T	385_Q	2.270	1.00
123_K	416_D	2.266	1.00
71_V	96_I	2.214	1.00
68_A	95_L	2.178	1.00
177_A	217_L	2.170	1.00
261_R	264_D	2.153	1.00
122_V	149_V	2.119	1.00
101_M	146_D	2.114	1.00
94_G	129_F	2.111	1.00
192_R	219_S	2.081	1.00
174_I	180_L	2.055	1.00
188_Y	192_R	2.043	1.00
281_F	478_T	2.041	1.00
286_Q	290_D	2.017	1.00
397_I	424_V	1.945	1.00
391_F	395_N	1.940	1.00
275_E	472_H	1.930	1.00
60_P	95_L	1.909	1.00
368_I	375_V	1.896	1.00
153_D	156_K	1.874	1.00
375_V	444_I	1.873	1.00
93_A	200_L	1.862	1.00
400_V	414_M	1.858	1.00
459_I	473_I	1.856	1.00
98_K	129_F	1.843	1.00
152_I	174_I	1.823	1.00
278_P	479_K	1.816	1.00
155_A	191_V	1.811	1.00
74_K	79_A	1.809	1.00
456_E	494_I	1.802	1.00
174_I	191_V	1.776	1.00
118_V	149_V	1.765	1.00
170_D	197_K	1.748	1.00
393_Q	399_S	1.730	1.00
360_K	371_I	1.729	1.00
441_N	469_R	1.717	1.00
311_L	314_E	1.714	1.00
384_T	446_Y	1.689	1.00
406_F	414_M	1.680	1.00
56_P	91_V	1.665	1.00
172_V	194_L	1.663	1.00
109_I	171_L	1.655	1.00
97_L	173_I	1.646	1.00
365_V	395_N	1.635	1.00
112_L	150_S	1.631	1.00
168_P	197_K	1.621	1.00
172_V	196_K	1.621	1.00
58_F	128_K	1.610	1.00
131_I	134_V	1.605	1.00
272_R	460_G	1.591	1.00
292_I	315_C	1.588	1.00
112_L	155_A	1.583	1.00
478_T	481_T	1.581	1.00
168_P	195_V	1.573	1.00
371_I	442_H	1.567	1.00
442_H	474_Y	1.566	1.00
148_V	169_Y	1.562	1.00
307_S	310_T	1.551	1.00
365_V	369_K	1.539	1.00
417_L	420_G	1.520	1.00
444_I	476_M	1.520	1.00
253_V	257_M	1.518	1.00
374_K	439_F	1.515	1.00
290_D	294_R	1.514	1.00
71_V	79_A	1.503	1.00
367_L	371_I	1.502	1.00
177_A	203_T	1.496	1.00
79_A	200_L	1.472	1.00
317_S	384_T	1.466	1.00
488_K	492_E	1.449	1.00
49_L	52_P	1.436	1.00
367_L	444_I	1.432	1.00
153_D	179_K	1.427	1.00
123_K	412_D	1.418	1.00
373_D	442_H	1.418	1.00
210_R	213_E	1.408	1.00
398_S	423_Q	1.392	1.00
187_N	190_F	1.392	1.00
117_L	434_G	1.388	1.00
94_G	147_I	1.381	1.00
85_V	204_A	1.379	1.00
196_K	199_C	1.367	1.00
352_I	355_V	1.346	1.00
494_I	498_E	1.346	1.00
62_P	65_L	1.343	1.00
180_L	220_L	1.334	1.00
364_V	444_I	1.332	1.00
186_K	189_E	1.329	1.00
108_K	170_D	1.327	1.00
233_Q	238_K	1.325	1.00
245_A	248_H	1.324	1.00
277_V	474_Y	1.324	1.00
360_K	367_L	1.318	1.00
373_D	469_R	1.317	1.00
410_K	414_M	1.303	1.00
400_V	422_I	1.295	1.00
171_L	200_L	1.290	1.00
489_L	492_E	1.288	1.00
58_F	91_V	1.287	1.00
273_H	472_H	1.283	1.00
132_P	146_D	1.281	1.00
186_K	190_F	1.272	1.00
181_K	213_E	1.267	1.00
495_H	499_K	1.263	1.00
99_E	102_I	1.262	1.00
56_P	98_K	1.260	1.00
285_E	359_S	1.252	1.00
98_K	102_I	1.251	1.00
71_V	200_L	1.250	1.00
123_K	127_E	1.241	1.00
512_Q	515_N	1.239	1.00
364_V	377_I	1.236	1.00
487_L	491_Y	1.233	1.00
391_F	394_Q	1.233	1.00
413_W	416_D	1.230	1.00
362_L	395_N	1.228	1.00
97_L	171_L	1.225	1.00
135_E	139_S	1.218	1.00
317_S	321_A	1.212	1.00
230_N	233_Q	1.211	1.00
232_F	235_E	1.209	1.00
199_C	220_L	1.208	1.00
111_I	147_I	1.207	1.00
279_I	359_S	1.205	1.00
156_K	187_N	1.204	1.00
61_L	465_L	1.202	1.00
382_R	405_G	1.200	1.00
287_A	291_E	1.198	1.00
189_E	193_N	1.198	1.00
232_F	236_F	1.186	1.00
109_I	170_D	1.179	1.00
50_R	53_L	1.172	1.00
385_Q	401_P	1.166	1.00
96_I	171_L	1.164	1.00
392_L	397_I	1.161	1.00
230_N	234_E	1.161	1.00
171_L	198_Y	1.158	1.00
431_G	435_I	1.158	1.00
283_P	287_A	1.155	1.00
179_K	433_E	1.150	1.00
372_D	423_Q	1.149	1.00
69_Q	73_E	1.143	1.00
117_L	435_I	1.141	1.00
115_A	151_S	1.133	1.00
406_F	411_K	1.132	1.00
99_E	103_R	1.129	1.00
65_L	69_Q	1.128	1.00
477_A	487_L	1.127	1.00
178_H	433_E	1.127	1.00
173_I	202_L	1.126	1.00
290_D	293_S	1.125	1.00
374_K	420_G	1.116	1.00
165_L	193_N	1.112	1.00
51_A	54_Y	1.104	1.00
491_Y	494_I	1.099	1.00
80_I	221_L	1.098	1.00
462_I	471_V	1.098	1.00
513_V	517_E	1.095	1.00
442_H	472_H	1.089	1.00
235_E	248_H	1.089	1.00
281_F	289_Y	1.085	1.00
360_K	368_I	1.081	1.00
288_L	315_C	1.081	1.00
417_L	421_K	1.079	1.00
367_L	474_Y	1.076	1.00
201_L	217_L	1.075	1.00
390_W	394_Q	1.074	1.00
280_Q	286_Q	1.074	1.00
365_V	391_F	1.073	1.00
515_N	518_E	1.069	1.00
362_L	391_F	1.059	1.00
282_S	285_E	1.058	1.00
124_E	127_E	1.057	1.00
154_T	157_R	1.055	1.00
208_Q	451_N	1.052	1.00
279_I	478_T	1.051	1.00
229_Q	233_Q	1.050	1.00
117_L	120_Q	1.047	1.00
209_N	493_K	1.047	1.00
68_A	72_V	1.036	1.00
415_K	419_R	1.036	1.00
307_S	311_L	1.035	1.00
397_I	423_Q	1.035	1.00
63_H	265_T	1.030	1.00
120_Q	124_E	1.028	1.00
364_V	446_Y	1.026	1.00
119_S	122_V	1.025	1.00
68_A	99_E	1.024	1.00
212_E	233_Q	1.024	1.00
101_M	109_I	1.024	1.00
367_L	370_K	1.020	1.00
71_V	93_A	1.018	1.00
218_V	221_L	1.016	1.00
80_I	217_L	1.015	1.00
286_Q	480_H	1.011	1.00
231_H	235_E	1.010	1.00
364_V	388_L	1.008	1.00
352_I	358_N	1.007	1.00
491_Y	495_H	1.006	1.00
445_N	458_R	1.005	1.00
276_T	477_A	1.004	1.00
84_E	463_H	1.001	1.00
360_K	363_Q	0.998	1.00
427_A	430_A	0.991	1.00
48_G	51_A	0.989	1.00
56_P	95_L	0.988	1.00
428_T	458_R	0.986	1.00
377_I	424_V	0.985	1.00
415_K	435_I	0.984	1.00
277_V	363_Q	0.983	1.00
455_L	475_N	0.983	1.00
78_K	221_L	0.982	1.00
360_K	364_V	0.980	1.00
490_L	493_K	0.978	1.00
62_P	66_E	0.974	1.00
153_D	157_R	0.971	1.00
267_L	270_K	0.968	1.00
125_L	149_V	0.964	1.00
125_L	133_A	0.964	1.00
364_V	368_I	0.962	1.00
487_L	490_L	0.961	1.00
215_F	219_S	0.960	1.00
313_R	381_Y	0.953	1.00
188_Y	191_V	0.953	1.00
250_K	254_N	0.951	1.00
180_L	191_V	0.949	1.00
310_T	313_R	0.947	1.00
361_A	388_L	0.946	1.00
47_E	50_R	0.941	1.00
361_A	446_Y	0.940	1.00
179_K	187_N	0.938	1.00
366_D	370_K	0.937	1.00
115_A	153_D	0.933	1.00
228_S	231_H	0.931	1.00
485_H	488_K	0.930	1.00
243_L	247_E	0.929	1.00
449_P	455_L	0.925	1.00
150_S	154_T	0.923	1.00
262_R	460_G	0.921	1.00
107_K	170_D	0.918	1.00
110_L	169_Y	0.916	1.00
310_T	381_Y	0.914	1.00
113_V	118_V	0.913	1.00
363_Q	371_I	0.913	1.00
212_E	229_Q	0.913	1.00
184_K	189_E	0.912	1.00
389_Q	426_I	0.911	1.00
233_Q	236_F	0.909	1.00
363_Q	367_L	0.905	1.00
376_I	443_M	0.905	1.00
318_S	387_Y	0.898	1.00
187_N	191_V	0.897	1.00
409_G	413_W	0.896	1.00
427_A	431_G	0.893	1.00
185_T	190_F	0.893	1.00
310_T	314_E	0.892	1.00
445_N	475_N	0.891	1.00
68_A	96_I	0.890	1.00
375_V	442_H	0.890	1.00
233_Q	237_A	0.888	1.00
231_H	234_E	0.886	1.00
119_S	412_D	0.884	1.00
90_T	111_I	0.883	1.00
97_L	125_L	0.882	1.00
207_I	497_F	0.881	1.00
222_K	225_H	0.879	1.00
204_A	460_G	0.879	1.00
161_R	193_N	0.875	1.00
174_I	220_L	0.874	1.00
67_V	81_L	0.874	1.00
110_L	172_V	0.872	1.00
98_K	101_M	0.871	1.00
83_D	260_N	0.870	1.00
281_F	481_T	0.864	1.00
134_V	145_C	0.862	1.00
318_S	321_A	0.862	1.00
345_I	348_L	0.862	1.00
479_K	484_E	0.860	1.00
71_V	81_L	0.859	1.00
161_R	190_F	0.859	1.00
402_F	431_G	0.855	1.00
485_H	489_L	0.854	1.00
119_S	123_K	0.854	1.00
449_P	454_R	0.851	1.00
296_K	301_K	0.851	1.00
385_Q	403_R	0.848	1.00
236_F	240_K	0.844	1.00
386_I	403_R	0.844	1.00
121_W	124_E	0.843	1.00
398_S	417_L	0.843	1.00
113_V	151_S	0.841	1.00
105_L	170_D	0.839	1.00
191_V	194_L	0.839	1.00
258_I	262_R	0.837	1.00
279_I	285_E	0.836	1.00
66_E	69_Q	0.835	1.00
51_A	65_L	0.835	1.00
242_S	245_A	0.835	1.00
156_K	186_K	0.835	1.00
209_N	213_E	0.833	1.00
419_R	438_Q	0.833	1.00
219_S	224_G	0.832	1.00
351_R	354_Q	0.830	1.00
211_I	496_L	0.829	1.00
367_L	476_M	0.827	1.00
514_N	518_E	0.826	1.00
309_M	482_V	0.826	1.00
346_S	349_I	0.825	1.00
363_Q	370_K	0.824	1.00
190_F	193_N	0.821	1.00
517_E	520_L	0.818	1.00
214_I	253_V	0.817	1.00
115_A	408_R	0.814	1.00
161_R	165_L	0.814	1.00
359_S	362_L	0.813	1.00
457_Q	461_R	0.813	1.00
100_Y	170_D	0.810	1.00
188_Y	216_N	0.809	1.00
368_I	371_I	0.808	1.00
116_S	430_A	0.806	1.00
345_I	349_I	0.804	1.00
236_F	239_K	0.804	1.00
311_L	318_S	0.803	1.00
183_S	229_Q	0.803	1.00
237_A	241_S	0.802	1.00
91_V	128_K	0.799	1.00
441_N	472_H	0.799	1.00
374_K	441_N	0.798	1.00
328_K	331_D	0.796	1.00
124_E	436_N	0.796	1.00
47_E	53_L	0.795	1.00
189_E	192_R	0.794	1.00
133_A	149_V	0.793	1.00
448_L	490_L	0.793	1.00
150_S	155_A	0.793	1.00
429_E	454_R	0.792	1.00
251_D	254_N	0.789	1.00
379_T	447_D	0.788	1.00
402_F	430_A	0.786	1.00
173_I	200_L	0.783	1.00
364_V	367_L	0.780	1.00
371_I	444_I	0.778	1.00
329_M	332_Q	0.772	1.00
83_D	87_L	0.771	1.00
382_R	386_I	0.769	1.00
388_L	392_L	0.769	1.00
145_C	148_V	0.768	1.00
281_F	285_E	0.764	1.00
100_Y	171_L	0.760	1.00
484_E	488_K	0.760	1.00
184_K	187_N	0.759	1.00
481_T	484_E	0.759	1.00
110_L	150_S	0.758	1.00
236_F	252_L	0.757	1.00
276_T	487_L	0.757	1.00
309_M	312_Q	0.754	1.00
501_V	504_L	0.754	1.00
142_W	145_C	0.751	1.00
67_V	83_D	0.750	1.00
386_I	390_W	0.747	1.00
82_A	206_P	0.745	1.00
306_F	310_T	0.743	1.00
361_A	391_F	0.743	1.00
130_L	133_A	0.741	1.00
289_Y	481_T	0.740	1.00
461_R	464_R	0.739	1.00
306_F	311_L	0.739	1.00
360_K	365_V	0.737	1.00
402_F	405_G	0.736	1.00
111_I	121_W	0.735	1.00
489_L	493_K	0.735	1.00
516_F	520_L	0.734	1.00
118_V	122_V	0.734	1.00
190_F	194_L	0.733	1.00
269_W	272_R	0.731	1.00
93_A	97_L	0.730	1.00
488_K	491_Y	0.728	1.00
212_E	237_A	0.725	1.00
493_K	497_F	0.724	1.00
392_L	423_Q	0.724	1.00
373_D	472_H	0.723	1.00
497_F	500_V	0.723	1.00
236_F	248_H	0.723	1.00
153_D	187_N	0.722	1.00
460_G	463_H	0.717	1.00
70_K	74_K	0.715	1.00
97_L	111_I	0.715	1.00
178_H	208_Q	0.715	1.00
369_K	397_I	0.714	1.00
130_L	134_V	0.713	1.00
516_F	519_H	0.712	1.00
361_A	365_V	0.711	1.00
122_V	133_A	0.710	1.00
324_M	327_K	0.708	1.00
347_V	350_D	0.708	1.00
456_E	459_I	0.707	1.00
125_L	129_F	0.707	1.00
406_F	410_K	0.704	1.00
362_L	366_D	0.704	1.00
284_S	287_A	0.703	1.00
257_M	260_N	0.702	1.00
346_S	350_D	0.701	1.00
305_M	309_M	0.699	1.00
259_R	262_R	0.698	1.00
154_T	158_S	0.698	1.00
492_E	495_H	0.697	1.00
414_M	417_L	0.697	1.00
348_L	351_R	0.696	1.00
349_I	355_V	0.696	1.00
279_I	363_Q	0.694	1.00
314_E	321_A	0.693	1.00
185_T	189_E	0.692	1.00
291_E	295_L	0.691	1.00
326_L	329_M	0.689	1.00
315_C	322_V	0.689	1.00
375_V	424_V	0.689	1.00
303_A	307_S	0.688	1.00
385_Q	426_I	0.687	1.00
52_P	68_A	0.687	1.00
274_V	277_V	0.685	1.00
276_T	475_N	0.685	1.00
275_E	278_P	0.683	1.00
507_I	511_I	0.683	1.00
215_F	232_F	0.681	1.00
142_W	148_V	0.680	1.00
347_V	351_R	0.679	1.00
312_Q	316_C	0.679	1.00
304_S	308_I	0.676	0.99
508_L	511_I	0.676	0.99
443_M	473_I	0.676	0.99
234_E	238_K	0.674	0.99
285_E	288_L	0.668	0.99
448_L	487_L	0.667	0.99
274_V	459_I	0.666	0.99
351_R	355_V	0.665	0.99
150_S	158_S	0.665	0.99
352_I	356_T	0.665	0.99
462_I	473_I	0.664	0.99
306_F	313_R	0.663	0.99
282_S	359_S	0.663	0.99
232_F	239_K	0.662	0.99
350_D	353_N	0.660	0.99
345_I	358_N	0.660	0.99
247_E	250_K	0.660	0.99
371_I	375_V	0.660	0.99
208_Q	213_E	0.659	0.99
349_I	353_N	0.659	0.99
245_A	249_L	0.658	0.99
390_W	393_Q	0.656	0.99
377_I	423_Q	0.656	0.99
386_I	389_Q	0.656	0.99
377_I	444_I	0.656	0.99
111_I	125_L	0.654	0.99
248_H	251_D	0.653	0.99
59_T	65_L	0.653	0.99
313_R	317_S	0.651	0.99
65_L	68_A	0.648	0.99
403_R	406_F	0.647	0.99
382_R	427_A	0.645	0.99
235_E	239_K	0.644	0.99
60_P	68_A	0.644	0.99
96_I	100_Y	0.643	0.99
393_Q	398_S	0.643	0.99
229_Q	232_F	0.642	0.99
226_L	229_Q	0.642	0.99
228_S	236_F	0.641	0.99
278_P	484_E	0.641	0.99
411_K	430_A	0.640	0.99
345_I	352_I	0.638	0.99
208_Q	452_P	0.638	0.99
226_L	235_E	0.637	0.99
235_E	240_K	0.637	0.99
515_N	520_L	0.636	0.99
497_F	501_V	0.635	0.99
72_V	96_I	0.634	0.99
385_Q	389_Q	0.634	0.99
203_T	217_L	0.634	0.99
366_D	369_K	0.634	0.99
429_E	449_P	0.632	0.99
322_V	325_T	0.632	0.99
308_I	315_C	0.631	0.99
81_L	200_L	0.631	0.99
116_S	402_F	0.630	0.99
358_N	371_I	0.629	0.99
257_M	501_V	0.629	0.99
246_H	250_K	0.627	0.99
51_A	68_A	0.625	0.99
275_E	474_Y	0.625	0.99
87_L	92_E	0.624	0.99
511_I	515_N	0.623	0.99
70_K	258_I	0.622	0.99
362_L	365_V	0.622	0.99
307_S	314_E	0.621	0.99
83_D	258_I	0.620	0.99
233_Q	239_K	0.620	0.99
178_H	203_T	0.620	0.99
49_L	68_A	0.619	0.99
292_I	295_L	0.618	0.99
132_P	145_C	0.618	0.99
348_L	355_V	0.617	0.99
415_K	439_F	0.617	0.99
302_P	305_M	0.616	0.99
317_S	326_L	0.616	0.99
357_Q	363_Q	0.615	0.99
316_C	483_E	0.615	0.99
498_E	502_G	0.614	0.99
288_L	292_I	0.614	0.99
495_H	498_E	0.613	0.99
311_L	321_A	0.612	0.99
247_E	251_D	0.611	0.99
311_L	315_C	0.610	0.99
218_V	256_V	0.609	0.99
47_E	52_P	0.609	0.99
365_V	368_I	0.607	0.99
70_K	79_A	0.607	0.99
155_A	164_V	0.604	0.99
54_Y	57_S	0.603	0.99
244_E	248_H	0.602	0.99
73_E	77_G	0.601	0.99
108_K	169_Y	0.600	0.99
292_I	322_V	0.598	0.99
490_L	497_F	0.597	0.99
323_Y	327_K	0.597	0.99
50_R	54_Y	0.597	0.99
85_V	460_G	0.596	0.99
482_V	486_I	0.595	0.99
135_E	141_V	0.595	0.99
456_E	460_G	0.595	0.99
404_G	411_K	0.594	0.99
327_K	330_L	0.593	0.99
316_C	321_A	0.592	0.99
114_P	121_W	0.592	0.99
274_V	475_N	0.591	0.99
512_Q	520_L	0.590	0.99
376_I	440_C	0.587	0.99
505_D	508_L	0.587	0.99
325_T	328_K	0.586	0.99
312_Q	315_C	0.586	0.99
91_V	95_L	0.584	0.99
141_V	144_Q	0.583	0.99
86_G	89_K	0.581	0.98
309_M	313_R	0.579	0.98
236_F	249_L	0.576	0.98
486_I	489_L	0.575	0.98
368_I	377_I	0.574	0.98
78_K	199_C	0.573	0.98
380_E	449_P	0.572	0.98
46_F	49_L	0.572	0.98
67_V	71_V	0.570	0.98
308_I	311_L	0.569	0.98
113_V	149_V	0.569	0.98
381_Y	384_T	0.569	0.98
497_F	502_G	0.568	0.98
384_T	387_Y	0.567	0.98
345_I	350_D	0.563	0.98
97_L	131_I	0.560	0.98
360_K	369_K	0.559	0.98
114_P	117_L	0.559	0.98
72_V	100_Y	0.557	0.98
285_E	289_Y	0.556	0.98
229_Q	235_E	0.555	0.98
419_R	436_N	0.555	0.98
359_S	363_Q	0.555	0.98
317_S	325_T	0.554	0.98
514_N	517_E	0.552	0.98
310_T	316_C	0.552	0.98
365_V	371_I	0.551	0.98
490_L	494_I	0.550	0.98
515_N	519_H	0.549	0.98
97_L	147_I	0.548	0.98
313_R	316_C	0.547	0.98
60_P	91_V	0.547	0.98
490_L	496_L	0.547	0.98
109_I	173_I	0.546	0.98
285_E	315_C	0.546	0.98
379_T	388_L	0.541	0.98
311_L	317_S	0.541	0.98
354_Q	357_Q	0.541	0.98
459_I	475_N	0.537	0.97
314_E	317_S	0.537	0.97
382_R	385_Q	0.537	0.97
383_A	386_I	0.536	0.97
368_I	392_L	0.536	0.97
242_S	250_K	0.536	0.97
374_K	418_F	0.536	0.97
212_E	215_F	0.536	0.97
116_S	435_I	0.535	0.97
349_I	352_I	0.533	0.97
428_T	449_P	0.531	0.97
183_S	188_Y	0.531	0.97
260_N	264_D	0.531	0.97
96_I	99_E	0.531	0.97
345_I	351_R	0.530	0.97
201_L	221_L	0.530	0.97
190_F	195_V	0.530	0.97
388_L	426_I	0.530	0.97
242_S	249_L	0.529	0.97
172_V	220_L	0.528	0.97
253_V	256_V	0.528	0.97
304_S	309_M	0.528	0.97
53_L	102_I	0.525	0.97
408_R	412_D	0.525	0.97
185_T	191_V	0.525	0.97
48_G	54_Y	0.524	0.97
81_L	258_I	0.524	0.97
226_L	232_F	0.524	0.97
360_K	370_K	0.523	0.97
244_E	249_L	0.523	0.97
368_I	397_I	0.523	0.97
289_Y	293_S	0.522	0.97
457_Q	464_R	0.521	0.97
91_V	94_G	0.521	0.97
306_F	314_E	0.521	0.97
398_S	422_I	0.520	0.97
272_R	463_H	0.519	0.97
380_E	429_E	0.517	0.97
228_S	235_E	0.516	0.97
307_S	315_C	0.516	0.97
378_F	458_R	0.516	0.97
238_K	241_S	0.515	0.97
49_L	53_L	0.515	0.97
313_R	321_A	0.515	0.97
48_G	53_L	0.514	0.97
378_F	443_M	0.513	0.97
262_R	463_H	0.513	0.97
258_I	265_T	0.513	0.97
314_E	319_R	0.513	0.97
259_R	265_T	0.513	0.97
376_I	435_I	0.512	0.97
248_H	252_L	0.512	0.97
211_I	237_A	0.512	0.97
191_V	195_V	0.512	0.97
156_K	185_T	0.511	0.97
287_A	294_R	0.510	0.97
357_Q	360_K	0.509	0.97
348_L	353_N	0.509	0.97
85_V	458_R	0.508	0.96
271_Q	274_V	0.508	0.96
183_S	212_E	0.508	0.96
355_V	358_N	0.508	0.96
417_L	422_I	0.507	0.96
63_H	92_E	0.506	0.96
113_V	117_L	0.504	0.96
100_Y	198_Y	0.504	0.96
120_Q	128_K	0.503	0.96
84_E	262_R	0.503	0.96
432_G	454_R	0.502	0.96
81_L	92_E	0.501	0.96
418_F	440_C	0.500	0.96
429_E	458_R	0.500	0.96

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3mwyW	2	0.9282	100	0.308	Contact Map
1z3iX	4	0.9785	100	0.323	Contact Map
1z63A	1	0.7971	100	0.328	Contact Map
3dmqA	1	0.939	100	0.425	Contact Map
4a2qA	1	0.7756	100	0.467	Contact Map
2ykgA	1	0.8259	100	0.474	Contact Map
4a2wA	1	0.7666	100	0.478	Contact Map
1wp9A	1	0.7648	100	0.487	Contact Map
4a2pA	1	0.7271	100	0.501	Contact Map
2fwrA	1	0.7522	100	0.511	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0133 seconds.