GREMLIN Database
YQGS - Lipoteichoic acid synthase-like YqgS
UniProt: P54496 Sequences:
Download Alignment
We filter this alignment to remove sites that have many gaps before running GREMLIN.

Date: 2015_01
Length: 638 (535)
Sequences: 3946 (3276)
Seq/√Len: 141.6

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Sco Prob
284_N518_E6.5731.00
272_F447_K6.2721.00
331_K360_D5.6941.00
532_N547_D4.6381.00
394_K456_D4.4211.00
272_F275_D4.0711.00
250_V466_L4.0201.00
521_G548_L3.9211.00
248_I464_I3.6321.00
506_I509_I3.5291.00
489_I492_F3.3151.00
245_R461_N3.2651.00
286_V521_G3.2331.00
247_V534_L3.2041.00
252_L255_T3.2011.00
20_W23_T3.1671.00
390_S452_K3.1381.00
279_Q454_K3.0941.00
336_Y398_Q3.0461.00
454_K459_Y3.0361.00
261_N270_T2.9131.00
451_E455_E2.8391.00
247_V330_L2.7391.00
22_K25_A2.6971.00
330_L534_L2.6271.00
447_K451_E2.5751.00
248_I462_S2.5391.00
451_E454_K2.5201.00
507_P510_T2.4851.00
246_N400_F2.4111.00
448_R451_E2.3811.00
506_I510_T2.3581.00
246_N462_S2.3431.00
489_I493_E2.3241.00
268_E274_N2.2871.00
459_Y505_H2.2751.00
556_F559_L2.2481.00
463_V504_I2.2261.00
249_L401_Y2.1291.00
23_T27_Y2.1211.00
23_T26_V2.0391.00
270_T274_N2.0061.00
450_I464_I1.9981.00
392_L395_N1.9781.00
453_L464_I1.9771.00
364_D367_S1.9711.00
529_T549_L1.9361.00
502_L526_I1.9221.00
428_N433_N1.8701.00
41_E45_F1.8571.00
286_V502_L1.8521.00
485_L488_E1.8321.00
85_N95_F1.8241.00
386_F406_T1.8191.00
410_H469_D1.8131.00
417_E420_Q1.8121.00
409_N439_V1.8111.00
390_S456_D1.8051.00
312_G315_F1.7971.00
22_K27_Y1.7921.00
388_Q391_E1.7921.00
263_K282_N1.7901.00
465_V504_I1.7821.00
452_K455_E1.7701.00
37_N41_E1.7691.00
251_S299_E1.7681.00
216_D219_S1.7621.00
400_F458_L1.7361.00
459_Y464_I1.7351.00
305_S528_P1.7191.00
383_K448_R1.7161.00
338_A402_S1.7091.00
261_N274_N1.7051.00
555_D559_L1.6951.00
424_E429_S1.6911.00
275_D447_K1.6891.00
219_S222_E1.6891.00
16_I20_W1.6891.00
250_V446_L1.6871.00
490_T493_E1.6871.00
284_N516_T1.6821.00
554_L557_T1.6761.00
468_G500_V1.6711.00
249_L465_V1.6681.00
340_L392_L1.6671.00
162_S165_F1.6541.00
424_E427_S1.6411.00
252_L442_Q1.6181.00
416_D419_D1.6111.00
199_I202_G1.6101.00
224_E228_T1.6071.00
215_A219_S1.6011.00
272_F450_I1.5941.00
281_Y549_L1.5931.00
444_E448_R1.5691.00
416_D441_Y1.5641.00
383_K441_Y1.5581.00
467_Y523_Q1.5561.00
257_S499_K1.5481.00
329_I531_M1.5481.00
255_T259_V1.5441.00
259_V439_V1.5421.00
344_N347_F1.5321.00
273_L446_L1.5271.00
134_W137_I1.5261.00
255_T442_Q1.5231.00
22_K26_V1.5191.00
134_W138_R1.5171.00
449_F464_I1.5151.00
304_N325_A1.5101.00
212_R215_A1.5081.00
247_V465_V1.5071.00
126_A129_I1.5071.00
19_M22_K1.5051.00
313_A316_F1.5051.00
389_S404_L1.5001.00
460_D508_G1.4991.00
452_K456_D1.4981.00
312_G316_F1.4961.00
389_S393_M1.4601.00
45_F48_P1.4461.00
252_L446_L1.4441.00
20_W27_Y1.4381.00
280_S505_H1.4381.00
424_E428_N1.4341.00
295_T405_I1.4151.00
467_Y526_I1.4141.00
276_F446_L1.4111.00
243_K461_N1.4011.00
14_I22_K1.3981.00
386_F390_S1.3901.00
270_T273_L1.3861.00
302_V467_Y1.3831.00
385_F404_L1.3661.00
390_S394_K1.3581.00
109_D113_S1.3521.00
252_L466_L1.3501.00
351_D355_D1.3471.00
245_R463_V1.3381.00
261_N268_E1.3351.00
463_V530_L1.3211.00
133_I137_I1.3131.00
44_L48_P1.3121.00
386_F449_F1.3081.00
26_V29_T1.3051.00
163_V167_N1.3021.00
302_V526_I1.3001.00
123_L127_V1.2941.00
392_L396_L1.2941.00
531_M536_I1.2921.00
345_K364_D1.2911.00
394_K452_K1.2901.00
167_N171_S1.2891.00
440_R444_E1.2861.00
339_V405_I1.2861.00
311_R314_V1.2841.00
280_S503_V1.2821.00
45_F49_L1.2771.00
450_I454_K1.2721.00
250_V386_F1.2611.00
272_F451_E1.2581.00
445_A448_R1.2541.00
465_V530_L1.2521.00
339_V354_Y1.2491.00
251_S302_V1.2491.00
246_N460_D1.2481.00
181_R184_D1.2481.00
289_Q522_G1.2351.00
387_E448_R1.2351.00
16_I22_K1.2331.00
287_Y499_K1.2321.00
253_E469_D1.2281.00
391_E395_N1.2251.00
450_I466_L1.2251.00
336_Y361_S1.2231.00
15_A22_K1.2221.00
283_F502_L1.2201.00
448_R452_K1.2101.00
285_N499_K1.2091.00
275_D279_Q1.2071.00
197_F201_D1.2061.00
335_Y399_P1.2001.00
281_Y515_Q1.1971.00
271_P443_D1.1951.00
203_V207_K1.1941.00
256_Q471_Y1.1921.00
159_F162_S1.1891.00
346_S351_D1.1761.00
110_L113_S1.1761.00
277_I282_N1.1711.00
90_R122_D1.1661.00
281_Y517_I1.1631.00
238_L549_L1.1590.99
267_E436_F1.1590.99
17_L22_K1.1580.99
132_L135_L1.1580.99
159_F163_V1.1570.99
528_P545_G1.1510.99
53_L57_G1.1470.99
224_E227_V1.1460.99
276_F450_I1.1430.99
18_L22_K1.1340.99
17_L20_W1.1320.99
248_I400_F1.1270.99
220_L223_I1.1260.99
333_S536_I1.1250.99
182_S185_R1.1240.99
57_G60_L1.1230.99
255_T439_V1.1220.99
547_D550_S1.1200.99
338_A400_F1.1190.99
76_C80_F1.1170.99
191_N194_L1.1140.99
310_G314_V1.1090.99
22_K31_F1.1050.99
425_Y428_N1.1030.99
198_H203_V1.1000.99
109_D114_I1.0990.99
183_F186_E1.0990.99
201_D204_L1.0990.99
382_D386_F1.0960.99
393_M402_S1.0920.99
249_L526_I1.0900.99
488_E491_P1.0890.99
295_T298_S1.0890.99
20_W26_V1.0850.99
124_L127_V1.0840.99
199_I206_S1.0830.99
219_S223_I1.0790.99
189_V192_I1.0780.99
327_P359_Y1.0760.99
345_K351_D1.0730.99
147_P150_K1.0720.99
326_A530_L1.0700.99
130_A134_W1.0660.99
409_N438_T1.0660.99
193_S196_N1.0660.99
255_T270_T1.0650.99
247_V401_Y1.0630.99
349_N352_L1.0530.99
488_E492_F1.0450.99
349_N354_Y1.0440.99
285_N520_V1.0420.99
422_I440_R1.0370.99
22_K29_T1.0350.99
248_I393_M1.0320.99
310_G313_A1.0290.99
177_Q181_R1.0280.99
259_V436_F1.0270.99
289_Q301_I1.0260.99
444_E447_K1.0250.99
190_K195_F1.0230.99
251_S467_Y1.0200.99
253_E410_H1.0200.99
463_V506_I1.0130.99
415_L437_P1.0120.99
23_T33_I1.0120.99
197_F202_G1.0110.99
340_L402_S1.0110.99
127_V131_V1.0110.99
446_L466_L1.0100.99
19_M23_T1.0090.99
343_N347_F1.0080.99
486_G489_I1.0070.99
164_Y168_L1.0060.99
10_S15_A1.0030.99
251_S403_R1.0010.98
222_E225_N1.0000.98
415_L420_Q0.9980.98
484_F488_E0.9960.98
211_Q216_D0.9960.98
215_A220_L0.9940.98
272_F444_E0.9910.98
247_V463_V0.9830.98
223_I227_V0.9810.98
293_G297_D0.9780.98
334_G399_P0.9780.98
27_Y30_S0.9770.98
257_S282_N0.9760.98
123_L126_A0.9760.98
198_H201_D0.9740.98
421_L440_R0.9730.98
69_R73_A0.9700.98
329_I332_N0.9670.98
453_L457_G0.9660.98
16_I27_Y0.9510.98
131_V135_L0.9480.98
199_I203_V0.9450.98
138_R141_A0.9430.98
336_Y396_L0.9420.98
330_L531_M0.9410.98
15_A19_M0.9340.98
255_T466_L0.9340.98
149_T152_E0.9330.98
219_S224_E0.9320.98
20_W29_T0.9320.98
148_S152_E0.9310.98
359_Y403_R0.9300.98
419_D422_I0.9280.98
383_K444_E0.9280.98
13_L16_I0.9280.98
70_Y74_M0.9240.97
162_S166_F0.9240.97
414_D434_K0.9230.97
433_N437_P0.9170.97
419_D423_D0.9170.97
453_L458_L0.9170.97
554_L559_L0.9120.97
16_I23_T0.9120.97
268_E440_R0.9090.97
275_D278_K0.9040.97
282_N516_T0.9030.97
29_T32_H0.9020.97
384_E388_Q0.9020.97
277_I503_V0.9010.97
149_T153_R0.8990.97
409_N442_Q0.8980.97
168_L171_S0.8950.97
500_V523_Q0.8940.97
255_T273_L0.8940.97
273_L282_N0.8940.97
192_I195_F0.8930.97
135_L138_R0.8920.97
28_K34_K0.8910.97
554_L558_V0.8860.97
23_T29_T0.8860.97
326_A531_M0.8840.97
276_F503_V0.8840.97
350_R354_Y0.8820.97
252_L386_F0.8800.97
121_T129_I0.8800.97
338_A361_S0.8790.97
23_T28_K0.8790.97
169_G173_A0.8780.97
389_S402_S0.8770.97
379_G407_L0.8720.96
223_I226_Y0.8710.96
295_T410_H0.8690.96
466_L503_V0.8690.96
415_L422_I0.8690.96
191_N196_N0.8680.96
30_S33_I0.8670.96
14_I18_L0.8650.96
131_V137_I0.8600.96
214_L219_S0.8590.96
502_L548_L0.8570.96
388_Q392_L0.8510.96
215_A218_N0.8500.96
527_R531_M0.8500.96
181_R195_F0.8500.96
386_F442_Q0.8490.96
384_E387_E0.8470.96
273_L503_V0.8460.96
153_R156_Y0.8450.96
111_G115_G0.8440.96
275_D454_K0.8440.96
20_W33_I0.8440.96
249_L302_V0.8420.96
211_Q215_A0.8410.96
200_Y204_L0.8380.95
212_R217_S0.8360.95
415_L419_D0.8340.95
184_D195_F0.8330.95
309_L312_G0.8320.95
221_T224_E0.8320.95
442_Q445_A0.8320.95
311_R315_F0.8320.95
294_K297_D0.8300.95
198_H202_G0.8290.95
255_T260_I0.8270.95
85_N96_L0.8260.95
166_F172_E0.8260.95
276_F466_L0.8250.95
44_L47_N0.8240.95
396_L400_F0.8240.95
195_F201_D0.8230.95
391_E452_K0.8230.95
17_L23_T0.8210.95
410_H470_H0.8200.95
161_A165_F0.8200.95
545_G548_L0.8190.95
341_H350_R0.8180.95
408_T438_T0.8180.95
84_A96_L0.8160.95
11_F15_A0.8160.95
168_L172_E0.8160.95
487_K492_F0.8150.95
28_K32_H0.8140.95
308_P311_R0.8130.95
246_N399_P0.8120.95
129_I136_H0.8110.95
324_M332_N0.8100.95
177_Q184_D0.8080.95
336_Y360_D0.8070.94
484_F487_K0.8060.94
22_K30_S0.8060.94
398_Q461_N0.8050.94
172_E176_P0.8040.94
221_T225_N0.8030.94
292_Q298_S0.8010.94
127_V130_A0.8000.94
20_W24_Y0.7990.94
338_A392_L0.7970.94
180_T184_D0.7970.94
20_W31_F0.7930.94
485_L489_I0.7930.94
21_L25_A0.7900.94
331_K337_S0.7880.94
244_G333_S0.7880.94
181_R185_R0.7850.94
13_L17_L0.7830.94
56_F60_L0.7830.94
159_F168_L0.7790.93
276_F280_S0.7780.93
215_A222_E0.7780.93
222_E226_Y0.7760.93
211_Q214_L0.7750.93
15_A27_Y0.7750.93
157_F161_A0.7740.93
126_A130_A0.7740.93
108_G112_S0.7720.93
337_S401_Y0.7720.93
445_A449_F0.7710.93
406_T449_F0.7700.93
46_I167_N0.7700.93
248_I453_L0.7660.93
37_N40_Q0.7630.93
338_A396_L0.7610.93
532_N550_S0.7600.93
460_D507_P0.7600.93
359_Y362_F0.7600.93
37_N43_I0.7580.92
190_K196_N0.7570.92
363_F392_L0.7560.92
32_H35_I0.7560.92
121_T125_L0.7550.92
169_G172_E0.7520.92
46_I50_S0.7520.92
179_L182_S0.7520.92
54_L58_L0.7510.92
383_K419_D0.7510.92
27_Y31_F0.7500.92
387_E390_S0.7480.92
24_Y28_K0.7480.92
66_N69_R0.7480.92
304_N353_M0.7470.92
26_V34_K0.7440.92
128_D131_V0.7430.92
155_A159_F0.7420.92
15_A25_A0.7410.92
148_S158_L0.7390.91
217_S220_L0.7390.91
236_K239_F0.7390.91
24_Y29_T0.7380.91
25_A33_I0.7370.91
487_K493_E0.7360.91
210_A214_L0.7340.91
160_V164_Y0.7340.91
129_I137_I0.7330.91
145_D148_S0.7330.91
11_F27_Y0.7310.91
226_Y229_A0.7310.91
232_K236_K0.7310.91
177_Q185_R0.7310.91
555_D558_V0.7310.91
256_Q474_S0.7310.91
88_F297_D0.7260.91
457_G460_D0.7240.91
106_N109_D0.7210.90
381_K384_E0.7190.90
301_I523_Q0.7170.90
525_D545_G0.7170.90
135_L158_L0.7140.90
233_D236_K0.7140.90
15_A23_T0.7130.90
293_G298_S0.7120.90
45_F50_S0.7120.90
135_L139_Q0.7110.90
358_G364_D0.7110.90
184_D190_K0.7100.90
435_Y439_V0.7100.90
131_V136_H0.7090.90
15_A18_L0.7060.90
14_I24_Y0.7060.90
200_Y203_V0.7050.89
476_N487_K0.7050.89
249_L326_A0.7040.89
146_I149_T0.7040.89
177_Q182_S0.7010.89
256_Q435_Y0.7000.89
309_L313_A0.6990.89
293_G296_S0.6980.89
212_R218_N0.6960.89
335_Y534_L0.6940.89
326_A527_R0.6940.89
180_T183_F0.6930.89
11_F17_L0.6920.89
26_V31_F0.6920.89
220_L224_E0.6910.88
425_Y429_S0.6890.88
216_D220_L0.6870.88
263_K266_G0.6860.88
85_N198_H0.6860.88
150_K165_F0.6850.88
361_S364_D0.6850.88
165_F169_G0.6840.88
471_Y474_S0.6840.88
28_K31_F0.6830.88
24_Y31_F0.6830.88
253_E406_T0.6820.88
519_T548_L0.6810.88
299_E350_R0.6800.88
247_V530_L0.6790.88
473_I497_L0.6760.87
47_N56_F0.6750.87
96_L260_I0.6750.87
215_A223_I0.6720.87
295_T299_E0.6720.87
217_S224_E0.6710.87
43_I46_I0.6710.87
251_S405_I0.6710.87
270_T443_D0.6700.87
546_N554_L0.6690.87
527_R543_Q0.6680.87
25_A28_K0.6680.87
415_L423_D0.6670.87
209_S214_L0.6670.87
422_I437_P0.6660.87
316_F320_G0.6660.87
235_N238_L0.6650.87
349_N353_M0.6640.86
419_D444_E0.6620.86
268_E271_P0.6600.86
308_P312_G0.6590.86
177_Q195_F0.6590.86
31_F34_K0.6580.86
168_L176_P0.6550.86
260_I270_T0.6550.86
17_L25_A0.6530.86
450_I459_Y0.6520.85
292_Q295_T0.6490.85
158_L162_S0.6480.85
336_Y530_L0.6460.85
29_T34_K0.6450.85
257_S263_K0.6450.85
74_M148_S0.6440.85
383_K387_E0.6440.85
442_Q523_Q0.6430.85
292_Q296_S0.6430.85
488_E493_E0.6430.85
296_S299_E0.6420.85
47_N60_L0.6420.85
136_H140_K0.6420.85
129_I132_L0.6390.84
65_K68_N0.6390.84
277_I284_N0.6370.84
502_L521_G0.6360.84
194_L198_H0.6350.84
514_P517_I0.6350.84
424_E430_Q0.6350.84
14_I19_M0.6350.84
196_N199_I0.6340.84
376_V407_L0.6330.84
282_N503_V0.6330.84
100_V103_Q0.6330.84
210_A217_S0.6330.84
197_F204_L0.6320.84
327_P358_G0.6320.84
330_L401_Y0.6300.83
173_A176_P0.6290.83
551_D555_D0.6290.83
217_S225_N0.6290.83
10_S14_I0.6270.83
309_L314_V0.6270.83
27_Y32_H0.6260.83
208_Q211_Q0.6260.83
150_K153_R0.6260.83
265_N436_F0.6260.83
504_I529_T0.6250.83
178_L181_R0.6250.83
404_L449_F0.6230.83
225_N228_T0.6230.83
156_Y160_V0.6230.83
420_Q423_D0.6230.83
275_D451_E0.6220.83
28_K33_I0.6210.83
22_K33_I0.6210.83
248_I449_F0.6210.83
435_Y472_G0.6190.82
382_D385_F0.6190.82
22_K28_K0.6190.82
245_R335_Y0.6180.82
21_L26_V0.6180.82
166_F169_G0.6170.82
159_F167_N0.6160.82
121_T131_V0.6160.82
337_S360_D0.6150.82
486_G492_F0.6140.82
292_Q297_D0.6140.82
196_N203_V0.6140.82
92_Y97_T0.6130.82
486_G491_P0.6110.82
115_G118_L0.6110.82
122_D125_L0.6100.81
218_N221_T0.6100.81
300_F314_V0.6100.81
143_Q148_S0.6090.81
274_N277_I0.6090.81
247_V326_A0.6050.81
373_E376_V0.6050.81
295_T469_D0.6050.81
41_E44_L0.6020.81
109_D112_S0.6010.81
269_I436_F0.6000.80
242_A463_V0.5980.80
171_S174_E0.5970.80
350_R353_M0.5970.80
288_H292_Q0.5960.80
413_F431_T0.5950.80
277_I280_S0.5950.80
46_I49_L0.5950.80
391_E394_K0.5940.80
15_A21_L0.5940.80
253_E409_N0.5940.80
271_P274_N0.5940.80
215_A224_E0.5930.80
401_Y530_L0.5930.80
44_L54_L0.5930.80
157_F170_L0.5920.80
244_G399_P0.5920.80
187_M190_K0.5900.79
49_L57_G0.5890.79
26_V30_S0.5870.79
246_N463_V0.5860.79
46_I52_L0.5840.79
255_T409_N0.5840.79
286_V526_I0.5840.79
217_S226_Y0.5840.79
466_L505_H0.5790.78
193_S200_Y0.5780.78
352_L356_S0.5780.78
12_M18_L0.5770.78
121_T130_A0.5760.78
264_L436_F0.5750.78
354_Y362_F0.5740.77
447_K450_I0.5720.77
120_P131_V0.5690.77
342_A407_L0.5680.77
18_L25_A0.5680.77
192_I196_N0.5670.77
212_R216_D0.5660.76
262_E269_I0.5660.76
211_Q217_S0.5660.76
412_P523_Q0.5650.76
120_P124_L0.5640.76
19_M33_I0.5640.76
379_G412_P0.5630.76
45_F51_F0.5630.76
91_F413_F0.5620.76
23_T34_K0.5610.76
154_A166_F0.5600.76
217_S221_T0.5600.76
393_M453_L0.5600.76
81_V84_A0.5600.76
313_A317_T0.5590.76
327_P401_Y0.5590.76
18_L29_T0.5570.75
419_D441_Y0.5560.75
23_T30_S0.5560.75
363_F367_S0.5550.75
229_A232_K0.5550.75
101_L277_I0.5540.75
347_F350_R0.5540.75
202_G206_S0.5540.75
158_L169_G0.5530.75
284_N517_I0.5530.75
342_A385_F0.5520.75
408_T441_Y0.5520.75
145_D149_T0.5510.75
88_F97_T0.5510.75
162_S170_L0.5510.75
204_L207_K0.5510.75
62_L66_N0.5500.74
85_N409_N0.5500.74
393_M449_F0.5500.74
115_G465_V0.5500.74
240_G243_K0.5500.74
531_M543_Q0.5490.74
137_I140_K0.5480.74
288_H471_Y0.5480.74
296_S308_P0.5470.74
133_I136_H0.5470.74
38_L43_I0.5450.74
451_E518_E0.5450.74
14_I21_L0.5450.74
387_E452_K0.5450.74
259_V432_L0.5440.74
436_F440_R0.5440.74
485_L491_P0.5440.74
286_V289_Q0.5430.73
29_T33_I0.5410.73
74_M326_A0.5410.73
442_Q446_L0.5410.73
347_F354_Y0.5410.73
57_G61_F0.5410.73
102_F106_N0.5410.73
45_F55_I0.5400.73
301_I406_T0.5400.73
58_L62_L0.5400.73
245_R462_S0.5400.73
169_G174_E0.5400.73
145_D152_E0.5390.73
71_I75_S0.5390.73
178_L185_R0.5390.73
386_F445_A0.5390.73
71_I74_M0.5380.73
21_L24_Y0.5380.73
239_F532_N0.5370.73
280_S462_S0.5370.73
413_F472_G0.5340.72
127_V137_I0.5340.72
97_T100_V0.5330.72
182_S196_N0.5330.72
301_I304_N0.5330.72
485_L493_E0.5330.72
103_Q106_N0.5330.72
179_L183_F0.5320.72
348_W354_Y0.5320.72
58_L64_G0.5320.72
164_Y171_S0.5310.72
51_F56_F0.5310.72
385_F445_A0.5310.72
246_N402_S0.5300.72
140_K143_Q0.5300.72
426_D429_S0.5300.72
416_D422_I0.5290.72
141_A145_D0.5290.72
10_S23_T0.5280.71
213_A220_L0.5280.71
40_Q43_I0.5280.71
172_E175_R0.5270.71
245_R399_P0.5270.71
553_K557_T0.5270.71
430_Q434_K0.5260.71
155_A166_F0.5250.71
152_E156_Y0.5250.71
419_D424_E0.5250.71
16_I24_Y0.5240.71
253_E382_D0.5240.71
325_A328_E0.5220.71
485_L492_F0.5220.71
177_Q183_F0.5210.70
338_A363_F0.5210.70
328_E332_N0.5190.70
256_Q472_G0.5180.70
164_Y167_N0.5170.70
54_L57_G0.5170.70
201_D205_Q0.5160.70
149_T160_V0.5150.70
254_S468_G0.5140.69
212_R220_L0.5140.69
186_E190_K0.5140.69
380_L384_E0.5130.69
253_E470_H0.5130.69
343_N407_L0.5130.69
129_I134_W0.5120.69
72_I75_S0.5120.69
296_S348_W0.5110.69
191_N195_F0.5110.69
435_Y471_Y0.5110.69
163_V170_L0.5100.69
352_L355_D0.5100.69
189_V195_F0.5090.69
128_D132_L0.5090.69
39_T77_L0.5080.69
13_L21_L0.5080.69
44_L50_S0.5070.68
111_G114_I0.5070.68
446_L450_I0.5070.68
11_F16_I0.5070.68
16_I21_L0.5070.68
164_Y169_G0.5070.68
550_S553_K0.5060.68
353_M357_F0.5050.68
254_S469_D0.5050.68
350_R362_F0.5050.68
342_A378_W0.5040.68
25_A31_F0.5040.68
111_G526_I0.5040.68
116_T120_P0.5040.68
523_Q526_I0.5030.68
411_F497_L0.5030.68
309_L315_F0.5030.68
525_D528_P0.5030.68
341_H348_W0.5030.68
327_P357_F0.5020.68
524_I528_P0.5020.68
188_L192_I0.5010.67
435_Y438_T0.5010.67
461_N465_V0.5010.67
218_N223_I0.5010.67
51_F58_L0.5000.67
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

HHsearch Results:
Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov % HHΔ  
2w8dA 1 0.6505 100 0.429 Contact Map
2w5qA 1 0.6536 100 0.437 Contact Map
4uorA 3 0.6411 100 0.448 Contact Map
4uopA 2 0.6129 100 0.458 Contact Map
3ed4A 3 0.6097 100 0.493 Contact Map
4upiA 2 0.5972 100 0.495 Contact Map
4uplA 2 0.6019 100 0.496 Contact Map
4uphA 2 0.5878 100 0.5 Contact Map
3b5qA 1 0.5925 100 0.503 Contact Map
2vqrA 3 0.5878 100 0.504 Contact Map

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

Page generated in 0.0163 seconds.