YQGF - BACSU - GREMLIN Contacts

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YQGF - Uncharacterized protein YqgF

UniProt:	P54488	Sequences: MRRNKPKKQNHKEKKKSLPIRLNILFLAAFVIFTWIIVELGIKQIVQGDDYKNQANKQEQSEVSSAVPRGKIYDRNFNAIVTNKALNAITYTRSKSTTQEQRLKIAKKLSDMIKVDTKKVTERDKKDYWILTRPKEAKKLISSKERQQVEDKKISDDDLYQLQLKRITDKQLNELTDKDMQILAIKRQMDSGYALTPQYIKNEDVSAKEMAVVSEHLDELPGVDVTSDWEREYPYKNLLRSVLGSVSSSNEGLPSNLLDHYLSLGYSRNDRVGKSYLEYQYESLLQGQKAKVENITDSKGNVTGTKTVSEGKAGKDLVLTIDIDLQKSVEKIIEKKLKAAKARPSTELLDRAFVVMMDPRNGEVLTMAGKQIKRENGAYKFDDYALGAMTSSYAMGSAVKGATVLTGLQTGAINLNTVFKDEPLYIGQDKRGKKSWQNLGPVGIQTALEKSSNVFMFKTAIAVGKGEYKPHQALPLDTSAFDTFRNYFSQFGLGVKTGIDLPNEMTGYKGTSRLSGFLLDFAIGQYDTYTPLELAQYVSTIANGGYRMKPQLVKEVRDSNAKKGIGAVVDSVQPEVLNKVDMKSSYIEEVQAGFRRVATKGTAAGQLASASYKPAAKTGTAQSFYDGPDKSKTGTDTYNTTLVAYAPADNPEIAISVVVPWTYIDYNQRYSITNEIGREVMDKYFELKSKQDKEGTQQKNKDKIEENAENTTSSDN	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	716 (598)
Sequences:	8183 (6158)
Seq/√Len:	251.8

ECOLI - PBPC PBPB PBPA PBP2 FTSI
BACSU - YQGF PBPA PBPG PBPF PBPD PBPH PBPB SP5D PBPI PBPC

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
199_Y	209_E	4.706	1.00
190_D	200_I	4.102	1.00
251_E	255_S	4.085	1.00
244_G	254_P	3.800	1.00
250_N	253_L	3.701	1.00
558_D	567_A	3.574	1.00
535_A	656_S	3.495	1.00
643_V	656_S	3.367	1.00
98_T	102_R	3.287	1.00
356_M	655_I	3.273	1.00
442_V	452_S	3.189	1.00
356_M	680_V	3.128	1.00
244_G	251_E	2.997	1.00
125_K	128_Y	2.974	1.00
546_Y	579_K	2.961	1.00
233_Y	237_N	2.754	1.00
333_I	352_A	2.707	1.00
126_K	130_I	2.700	1.00
591_Q	645_Y	2.678	1.00
127_D	130_I	2.597	1.00
410_T	483_T	2.532	1.00
75_R	322_D	2.435	1.00
102_R	248_S	2.428	1.00
73_Y	316_D	2.420	1.00
100_E	189_M	2.402	1.00
363_E	551_Q	2.397	1.00
354_V	680_V	2.386	1.00
425_Y	430_K	2.384	1.00
168_T	171_Q	2.372	1.00
318_V	555_E	2.351	1.00
445_Q	592_A	2.332	1.00
359_P	654_A	2.312	1.00
254_P	258_L	2.302	1.00
113_I	170_K	2.268	1.00
98_T	101_Q	2.244	1.00
358_D	361_N	2.242	1.00
190_D	201_K	2.233	1.00
92_T	95_K	2.218	1.00
93_R	101_Q	2.206	1.00
363_E	554_K	2.188	1.00
446_T	450_K	2.179	1.00
208_K	260_H	2.170	1.00
74_D	78_N	2.161	1.00
71_K	79_A	2.156	1.00
364_V	552_L	2.147	1.00
536_Q	550_P	2.131	1.00
107_K	238_L	2.130	1.00
207_A	249_S	2.109	1.00
335_K	679_E	2.104	1.00
536_Q	547_R	2.052	1.00
445_Q	596_R	2.050	1.00
241_S	258_L	2.033	1.00
418_V	441_P	2.017	1.00
111_D	119_K	1.998	1.00
329_V	354_V	1.995	1.00
93_R	174_E	1.982	1.00
99_Q	102_R	1.946	1.00
365_L	653_I	1.936	1.00
93_R	170_K	1.931	1.00
616_A	642_L	1.926	1.00
99_Q	210_M	1.911	1.00
284_L	287_G	1.909	1.00
327_K	331_K	1.905	1.00
358_D	365_L	1.904	1.00
97_T	201_K	1.879	1.00
110_S	242_V	1.875	1.00
592_A	595_R	1.861	1.00
101_Q	170_K	1.839	1.00
544_G	588_E	1.838	1.00
399_V	488_F	1.831	1.00
409_Q	490_Q	1.820	1.00
387_G	662_T	1.798	1.00
242_V	245_S	1.796	1.00
186_K	195_L	1.795	1.00
406_T	487_Y	1.785	1.00
486_N	490_Q	1.782	1.00
541_I	590_V	1.777	1.00
283_S	286_Q	1.777	1.00
125_K	130_I	1.774	1.00
402_A	537_Y	1.765	1.00
316_D	557_R	1.761	1.00
439_L	452_S	1.760	1.00
212_V	232_E	1.758	1.00
685_F	688_K	1.752	1.00
328_S	683_K	1.749	1.00
678_R	682_D	1.745	1.00
395_M	529_Y	1.744	1.00
446_T	449_E	1.736	1.00
615_A	645_Y	1.720	1.00
460_A	484_F	1.719	1.00
531_P	656_S	1.716	1.00
95_K	203_E	1.711	1.00
534_L	643_V	1.709	1.00
73_Y	318_V	1.707	1.00
434_K	668_Q	1.698	1.00
355_V	531_P	1.697	1.00
107_K	242_V	1.697	1.00
110_S	246_V	1.697	1.00
100_E	210_M	1.689	1.00
325_L	684_Y	1.682	1.00
357_M	535_A	1.680	1.00
115_V	164_L	1.676	1.00
415_L	589_E	1.673	1.00
106_A	248_S	1.667	1.00
464_G	481_F	1.667	1.00
240_R	254_P	1.663	1.00
219_E	222_G	1.656	1.00
449_E	596_R	1.655	1.00
358_D	363_E	1.654	1.00
207_A	257_L	1.652	1.00
281_Y	285_L	1.637	1.00
71_K	316_D	1.636	1.00
241_S	254_P	1.634	1.00
419_F	462_A	1.619	1.00
401_G	541_I	1.611	1.00
75_R	365_L	1.603	1.00
420_K	441_P	1.600	1.00
242_V	246_V	1.585	1.00
355_V	532_L	1.582	1.00
104_K	214_S	1.581	1.00
483_T	486_N	1.553	1.00
415_L	593_G	1.550	1.00
677_G	681_M	1.545	1.00
106_A	246_V	1.544	1.00
104_K	182_I	1.533	1.00
683_K	686_E	1.521	1.00
408_L	593_G	1.517	1.00
613_K	690_K	1.514	1.00
325_L	365_L	1.510	1.00
331_K	335_K	1.506	1.00
354_V	655_I	1.503	1.00
447_A	455_F	1.499	1.00
200_I	204_D	1.484	1.00
228_D	231_R	1.481	1.00
103_L	243_L	1.476	1.00
330_E	368_A	1.472	1.00
105_I	113_I	1.467	1.00
568_V	571_S	1.454	1.00
328_S	332_I	1.450	1.00
596_R	600_K	1.450	1.00
78_N	323_I	1.444	1.00
598_A	614_P	1.442	1.00
244_G	249_S	1.434	1.00
405_L	586_Y	1.433	1.00
194_A	198_Q	1.429	1.00
409_Q	586_Y	1.427	1.00
104_K	217_L	1.418	1.00
141_I	163_Q	1.418	1.00
200_I	203_E	1.417	1.00
100_E	104_K	1.414	1.00
555_E	571_S	1.402	1.00
659_V	676_I	1.401	1.00
181_Q	185_I	1.399	1.00
539_S	654_A	1.389	1.00
422_E	458_K	1.381	1.00
614_P	646_A	1.377	1.00
487_Y	491_F	1.367	1.00
557_R	568_V	1.365	1.00
357_M	654_A	1.362	1.00
205_V	210_M	1.356	1.00
460_A	481_F	1.355	1.00
280_Q	285_L	1.349	1.00
652_E	691_Q	1.348	1.00
180_M	217_L	1.339	1.00
101_Q	113_I	1.337	1.00
230_E	234_P	1.335	1.00
93_R	113_I	1.335	1.00
79_A	82_T	1.325	1.00
354_V	657_V	1.322	1.00
403_T	522_A	1.319	1.00
91_Y	96_S	1.315	1.00
398_A	534_L	1.311	1.00
454_V	458_K	1.306	1.00
251_E	254_P	1.305	1.00
432_G	436_W	1.305	1.00
281_Y	320_T	1.302	1.00
385_A	391_S	1.298	1.00
171_Q	174_E	1.295	1.00
544_G	584_S	1.295	1.00
405_L	582_M	1.292	1.00
331_K	683_K	1.289	1.00
167_I	175_L	1.285	1.00
182_I	189_M	1.283	1.00
549_K	575_E	1.282	1.00
318_V	557_R	1.282	1.00
449_E	600_K	1.281	1.00
409_Q	487_Y	1.279	1.00
284_L	288_Q	1.279	1.00
579_K	584_S	1.272	1.00
255_S	259_D	1.271	1.00
282_E	285_L	1.266	1.00
111_D	114_K	1.263	1.00
241_S	245_S	1.263	1.00
93_R	96_S	1.262	1.00
655_I	680_V	1.262	1.00
206_S	260_H	1.260	1.00
332_I	679_E	1.256	1.00
409_Q	583_K	1.255	1.00
583_K	586_Y	1.247	1.00
252_G	256_N	1.240	1.00
444_I	459_T	1.238	1.00
405_L	541_I	1.237	1.00
96_S	100_E	1.231	1.00
531_P	535_A	1.231	1.00
582_M	587_I	1.223	1.00
229_W	233_Y	1.222	1.00
442_V	455_F	1.220	1.00
408_L	589_E	1.218	1.00
452_S	455_F	1.206	1.00
244_G	258_L	1.205	1.00
150_E	154_I	1.204	1.00
249_S	254_P	1.203	1.00
231_R	234_P	1.201	1.00
280_Q	283_S	1.200	1.00
402_A	488_F	1.197	1.00
184_A	224_D	1.195	1.00
336_K	679_E	1.190	1.00
386_L	389_M	1.184	1.00
329_V	680_V	1.183	1.00
330_E	334_E	1.180	1.00
461_I	519_L	1.177	1.00
405_L	487_Y	1.173	1.00
543_N	548_M	1.171	1.00
443_G	446_T	1.168	1.00
493_L	529_Y	1.163	1.00
419_F	455_F	1.162	1.00
315_K	569_V	1.162	1.00
41_G	45_I	1.161	1.00
126_K	129_W	1.161	1.00
495_V	533_E	1.160	1.00
491_F	540_T	1.159	1.00
560_N	567_A	1.152	1.00
591_Q	594_F	1.148	1.00
595_R	599_T	1.146	1.00
222_G	231_R	1.143	1.00
124_D	127_D	1.141	1.00
540_T	547_R	1.141	1.00
199_Y	204_D	1.137	1.00
414_N	417_T	1.135	1.00
644_A	677_G	1.134	1.00
325_L	366_T	1.134	1.00
598_A	616_A	1.133	1.00
287_G	290_A	1.122	1.00
124_D	128_Y	1.122	1.00
255_S	258_L	1.120	1.00
360_R	652_E	1.119	1.00
237_N	258_L	1.118	1.00
435_S	439_L	1.118	1.00
598_A	642_L	1.115	1.00
125_K	129_W	1.114	1.00
367_M	386_L	1.114	1.00
541_I	645_Y	1.112	1.00
92_T	174_E	1.111	1.00
253_L	256_N	1.109	1.00
639_N	658_V	1.108	1.00
99_Q	253_L	1.105	1.00
177_D	189_M	1.104	1.00
355_V	367_M	1.098	1.00
356_M	653_I	1.097	1.00
133_R	142_S	1.095	1.00
208_K	257_L	1.094	1.00
591_Q	615_A	1.094	1.00
241_S	244_G	1.092	1.00
306_K	309_S	1.092	1.00
333_I	368_A	1.083	1.00
359_P	653_I	1.082	1.00
444_I	593_G	1.071	1.00
595_R	613_K	1.071	1.00
398_A	643_V	1.069	1.00
74_D	323_I	1.068	1.00
91_Y	201_K	1.067	1.00
278_E	281_Y	1.067	1.00
491_F	582_M	1.061	1.00
40_L	43_K	1.060	1.00
162_L	166_R	1.058	1.00
256_N	260_H	1.054	1.00
99_Q	207_A	1.049	1.00
233_Y	236_K	1.048	1.00
429_D	457_F	1.048	1.00
456_M	459_T	1.047	1.00
542_A	645_Y	1.043	1.00
162_L	165_K	1.041	1.00
482_D	517_F	1.040	1.00
282_E	286_Q	1.038	1.00
283_S	288_Q	1.035	1.00
588_E	696_T	1.035	1.00
207_A	240_R	1.029	1.00
614_P	677_G	1.028	1.00
653_I	684_Y	1.026	1.00
329_V	368_A	1.024	1.00
413_I	462_A	1.021	1.00
75_R	363_E	1.018	1.00
597_V	603_A	1.016	1.00
118_K	157_D	1.016	1.00
393_Y	639_N	1.015	1.00
279_Y	285_L	1.012	1.00
460_A	522_A	1.012	1.00
151_D	155_S	1.011	1.00
408_L	590_V	1.008	1.00
487_Y	490_Q	1.008	1.00
487_Y	582_M	1.006	1.00
325_L	680_V	1.004	1.00
482_D	486_N	1.004	1.00
547_R	578_N	1.003	1.00
119_K	122_E	0.999	1.00
402_A	491_F	0.997	1.00
448_L	456_M	0.994	1.00
283_S	287_G	0.991	1.00
285_L	289_K	0.987	1.00
96_S	101_Q	0.987	1.00
281_Y	284_L	0.983	1.00
647_P	652_E	0.983	1.00
181_Q	187_R	0.982	1.00
111_D	115_V	0.981	1.00
442_V	447_A	0.980	1.00
655_I	681_M	0.979	1.00
644_A	681_M	0.978	1.00
558_D	566_G	0.978	1.00
367_M	552_L	0.976	1.00
111_D	121_T	0.975	1.00
329_V	366_T	0.973	1.00
208_K	236_K	0.971	1.00
280_Q	286_Q	0.970	1.00
541_I	591_Q	0.969	1.00
485_R	489_S	0.967	1.00
323_I	327_K	0.967	1.00
394_A	621_A	0.965	1.00
542_A	615_A	0.964	1.00
142_S	146_R	0.963	1.00
70_G	317_L	0.963	1.00
100_E	177_D	0.962	1.00
318_V	554_K	0.962	1.00
72_I	80_I	0.960	1.00
357_M	550_P	0.960	1.00
460_A	521_F	0.958	1.00
419_F	444_I	0.957	1.00
413_I	417_T	0.955	1.00
77_F	554_K	0.950	1.00
309_S	313_A	0.950	1.00
333_I	354_V	0.950	1.00
109_L	115_V	0.949	1.00
282_E	287_G	0.949	1.00
105_I	248_S	0.948	1.00
587_I	591_Q	0.947	1.00
73_Y	79_A	0.946	1.00
424_L	458_K	0.945	1.00
553_V	556_V	0.945	1.00
520_D	525_Q	0.943	1.00
140_L	175_L	0.941	1.00
435_S	452_S	0.941	1.00
457_F	523_I	0.936	1.00
359_P	542_A	0.936	1.00
90_T	174_E	0.935	1.00
640_T	673_T	0.934	1.00
144_K	147_Q	0.934	1.00
659_V	673_T	0.933	1.00
252_G	255_S	0.932	1.00
439_L	442_V	0.932	1.00
670_Y	674_N	0.932	1.00
555_E	568_V	0.928	1.00
279_Y	282_E	0.928	1.00
120_V	123_R	0.928	1.00
408_L	586_Y	0.927	1.00
194_A	200_I	0.927	1.00
320_T	363_E	0.927	1.00
129_W	148_Q	0.926	1.00
395_M	399_V	0.926	1.00
352_A	676_I	0.926	1.00
30_F	34_T	0.923	1.00
124_D	130_I	0.921	1.00
413_I	459_T	0.921	1.00
403_T	484_F	0.919	1.00
463_V	483_T	0.917	1.00
405_L	491_F	0.917	1.00
420_K	458_K	0.917	1.00
39_E	45_I	0.916	1.00
413_I	444_I	0.915	1.00
385_A	390_T	0.911	1.00
657_V	676_I	0.910	1.00
596_R	599_T	0.910	1.00
609_S	678_R	0.910	1.00
41_G	44_Q	0.910	1.00
42_I	46_V	0.908	1.00
551_Q	572_V	0.908	1.00
280_Q	284_L	0.907	1.00
123_R	138_K	0.907	1.00
584_S	588_E	0.905	1.00
406_T	410_T	0.903	1.00
44_Q	47_Q	0.899	1.00
419_F	459_T	0.899	1.00
407_G	459_T	0.898	1.00
320_T	551_Q	0.897	1.00
612_Y	652_E	0.895	1.00
548_M	576_V	0.894	1.00
355_V	535_A	0.891	1.00
322_D	325_L	0.891	1.00
351_R	387_G	0.890	1.00
101_Q	173_N	0.890	1.00
463_V	484_F	0.887	1.00
454_V	457_F	0.887	1.00
215_E	232_E	0.883	1.00
612_Y	689_S	0.883	1.00
26_F	30_F	0.880	1.00
189_M	213_V	0.879	1.00
230_E	233_Y	0.877	1.00
652_E	688_K	0.877	1.00
640_T	667_N	0.874	1.00
530_T	533_E	0.868	1.00
289_K	293_E	0.865	0.99
421_D	439_L	0.863	0.99
486_N	489_S	0.861	0.99
405_L	590_V	0.856	0.99
104_K	177_D	0.856	0.99
324_D	687_L	0.856	0.99
244_G	255_S	0.856	0.99
102_R	113_I	0.856	0.99
39_E	42_I	0.854	0.99
78_N	324_D	0.854	0.99
357_M	539_S	0.853	0.99
39_E	43_K	0.853	0.99
282_E	288_Q	0.852	0.99
288_Q	291_K	0.851	0.99
97_T	100_E	0.850	0.99
34_T	41_G	0.848	0.99
531_P	641_T	0.846	0.99
285_L	288_Q	0.842	0.99
386_L	390_T	0.842	0.99
438_N	454_V	0.841	0.99
442_V	446_T	0.841	0.99
190_D	194_A	0.840	0.99
43_K	47_Q	0.839	0.99
302_V	305_T	0.837	0.99
23_N	27_L	0.836	0.99
485_R	517_F	0.835	0.99
610_A	613_K	0.835	0.99
613_K	692_D	0.835	0.99
34_T	38_V	0.835	0.99
320_T	554_K	0.833	0.99
280_Q	287_G	0.832	0.99
693_K	696_T	0.831	0.99
24_I	28_A	0.831	0.99
325_L	356_M	0.828	0.99
328_S	331_K	0.828	0.99
600_K	604_A	0.824	0.99
30_F	39_E	0.823	0.99
448_L	593_G	0.822	0.99
657_V	677_G	0.819	0.99
372_I	375_E	0.818	0.99
212_V	215_E	0.816	0.99
184_A	195_L	0.815	0.99
29_A	36_I	0.815	0.99
281_Y	287_G	0.814	0.99
679_E	683_K	0.812	0.99
55_A	58_Q	0.811	0.99
534_L	641_T	0.811	0.99
289_K	292_V	0.810	0.99
93_R	173_N	0.810	0.99
529_Y	534_L	0.809	0.99
103_L	214_S	0.807	0.99
154_I	158_D	0.806	0.99
647_P	693_K	0.806	0.99
395_M	526_Y	0.803	0.99
625_Y	664_I	0.802	0.99
218_D	223_V	0.802	0.99
535_A	643_V	0.801	0.99
124_D	129_W	0.798	0.99
201_K	205_V	0.795	0.99
405_L	587_I	0.794	0.99
284_L	290_A	0.794	0.99
76_N	323_I	0.794	0.99
116_D	120_V	0.792	0.99
107_K	235_Y	0.792	0.99
460_A	519_L	0.787	0.99
277_L	280_Q	0.786	0.99
437_Q	440_G	0.785	0.99
216_H	219_E	0.783	0.99
458_K	462_A	0.783	0.99
587_I	590_V	0.782	0.99
37_I	44_Q	0.782	0.99
278_E	282_E	0.781	0.99
45_I	48_G	0.781	0.99
401_G	594_F	0.778	0.99
640_T	669_R	0.776	0.99
107_K	218_D	0.776	0.99
485_R	521_F	0.774	0.99
595_R	692_D	0.773	0.99
40_L	44_Q	0.772	0.99
71_K	82_T	0.772	0.99
421_D	440_G	0.772	0.99
336_K	676_I	0.771	0.99
364_V	532_L	0.770	0.99
395_M	525_Q	0.766	0.99
588_E	695_G	0.764	0.99
359_P	539_S	0.761	0.99
483_T	487_Y	0.761	0.99
353_F	531_P	0.759	0.99
89_I	190_D	0.758	0.99
332_I	676_I	0.756	0.99
536_Q	549_K	0.755	0.99
439_L	450_K	0.751	0.99
329_V	356_M	0.749	0.99
646_A	652_E	0.747	0.99
598_A	603_A	0.747	0.99
48_G	52_K	0.746	0.98
582_M	586_Y	0.745	0.98
206_S	210_M	0.742	0.98
249_S	253_L	0.741	0.98
24_I	27_L	0.741	0.98
439_L	446_T	0.739	0.98
538_V	643_V	0.737	0.98
37_I	45_I	0.736	0.98
361_N	551_Q	0.734	0.98
37_I	41_G	0.732	0.98
640_T	672_I	0.732	0.98
145_E	149_V	0.731	0.98
56_N	59_E	0.731	0.98
612_Y	685_F	0.729	0.98
335_K	339_A	0.729	0.98
219_E	223_V	0.729	0.98
579_K	582_M	0.728	0.98
594_F	645_Y	0.728	0.98
286_Q	289_K	0.728	0.98
278_E	283_S	0.727	0.98
43_K	46_V	0.727	0.98
136_E	180_M	0.727	0.98
464_G	483_T	0.727	0.98
680_V	684_Y	0.727	0.98
481_F	517_F	0.726	0.98
28_A	35_W	0.725	0.98
218_D	222_G	0.724	0.98
207_A	210_M	0.723	0.98
105_I	173_N	0.723	0.98
417_T	462_A	0.723	0.98
423_P	438_N	0.722	0.98
399_V	403_T	0.721	0.98
491_F	537_Y	0.719	0.98
277_L	281_Y	0.719	0.98
253_L	257_L	0.719	0.98
89_I	194_A	0.718	0.98
91_Y	190_D	0.718	0.98
494_G	533_E	0.717	0.98
607_L	610_A	0.716	0.98
421_D	438_N	0.714	0.98
23_N	26_F	0.713	0.98
325_L	328_S	0.712	0.98
284_L	552_L	0.712	0.98
31_V	38_V	0.710	0.98
120_V	161_Q	0.710	0.98
355_V	388_A	0.709	0.98
402_A	534_L	0.709	0.98
138_K	156_D	0.708	0.98
137_A	164_L	0.708	0.98
97_T	210_M	0.704	0.98
332_I	683_K	0.703	0.98
273_G	276_Y	0.702	0.98
392_S	528_T	0.701	0.98
36_I	39_E	0.701	0.98
104_K	189_M	0.699	0.98
490_Q	578_N	0.699	0.98
32_I	36_I	0.699	0.98
419_F	458_K	0.695	0.98
605_G	675_E	0.695	0.98
397_S	400_K	0.694	0.98
305_T	308_V	0.694	0.98
586_Y	590_V	0.693	0.98
286_Q	290_A	0.691	0.98
38_V	42_I	0.691	0.98
26_F	44_Q	0.690	0.98
144_K	148_Q	0.690	0.98
541_I	582_M	0.689	0.97
23_N	30_F	0.686	0.97
597_V	616_A	0.686	0.97
639_N	660_P	0.682	0.97
404_V	448_L	0.682	0.97
358_D	652_E	0.682	0.97
324_D	328_S	0.681	0.97
417_T	459_T	0.681	0.97
201_K	210_M	0.680	0.97
324_D	327_K	0.679	0.97
52_K	56_N	0.678	0.97
531_P	643_V	0.675	0.97
404_V	456_M	0.675	0.97
595_R	598_A	0.675	0.97
104_K	180_M	0.674	0.97
546_Y	576_V	0.673	0.97
167_I	171_Q	0.671	0.97
181_Q	186_K	0.670	0.97
353_F	387_G	0.670	0.97
25_L	29_A	0.669	0.97
612_Y	690_K	0.668	0.97
33_F	37_I	0.668	0.97
30_F	38_V	0.667	0.97
118_K	123_R	0.667	0.97
238_L	242_V	0.666	0.97
396_G	621_A	0.666	0.97
116_D	161_Q	0.666	0.97
238_L	241_S	0.665	0.97
41_G	47_Q	0.665	0.97
123_R	133_R	0.665	0.97
536_Q	539_S	0.665	0.97
607_L	611_S	0.664	0.97
70_G	73_Y	0.664	0.97
164_L	169_D	0.664	0.97
101_Q	105_I	0.663	0.97
395_M	534_L	0.663	0.97
284_L	291_K	0.661	0.97
279_Y	287_G	0.661	0.97
25_L	36_I	0.661	0.97
547_R	580_V	0.660	0.97
327_K	330_E	0.660	0.97
370_K	387_G	0.660	0.97
132_T	136_E	0.659	0.97
278_E	285_L	0.659	0.97
681_M	685_F	0.658	0.97
157_D	160_Y	0.657	0.97
123_R	157_D	0.656	0.97
283_S	289_K	0.656	0.97
80_I	323_I	0.656	0.97
494_G	497_T	0.655	0.97
52_K	55_A	0.654	0.97
655_I	677_G	0.653	0.97
367_M	388_A	0.653	0.97
403_T	460_A	0.652	0.97
321_I	552_L	0.652	0.97
433_K	438_N	0.651	0.96
77_F	318_V	0.651	0.96
498_G	526_Y	0.649	0.96
212_V	236_K	0.649	0.96
44_Q	48_G	0.648	0.96
392_S	533_E	0.647	0.96
592_A	596_R	0.646	0.96
68_P	90_T	0.646	0.96
413_I	419_F	0.644	0.96
603_A	642_L	0.642	0.96
287_G	291_K	0.642	0.96
173_N	177_D	0.642	0.96
278_E	286_Q	0.642	0.96
146_R	149_V	0.641	0.96
22_L	26_F	0.641	0.96
540_T	580_V	0.640	0.96
26_F	36_I	0.639	0.96
110_S	245_S	0.638	0.96
26_F	29_A	0.637	0.96
449_E	597_V	0.634	0.96
308_V	312_K	0.634	0.96
244_G	247_S	0.631	0.96
164_L	172_L	0.629	0.96
107_K	246_V	0.629	0.96
542_A	654_A	0.628	0.96
279_Y	283_S	0.627	0.96
645_Y	654_A	0.627	0.96
444_I	455_F	0.625	0.96
34_T	45_I	0.624	0.96
406_T	484_F	0.623	0.95
281_Y	286_Q	0.623	0.95
26_F	37_I	0.622	0.95
539_S	548_M	0.622	0.95
32_I	40_L	0.621	0.95
591_Q	693_K	0.621	0.95
338_K	371_Q	0.621	0.95
351_R	375_E	0.620	0.95
640_T	670_Y	0.619	0.95
28_A	32_I	0.619	0.95
425_Y	428_Q	0.618	0.95
599_T	608_A	0.617	0.95
364_V	367_M	0.617	0.95
33_F	40_L	0.617	0.95
96_S	189_M	0.617	0.95
489_S	496_K	0.616	0.95
96_S	99_Q	0.616	0.95
590_V	593_G	0.615	0.95
210_M	217_L	0.614	0.95
72_I	83_N	0.614	0.95
597_V	601_G	0.614	0.95
47_Q	50_D	0.613	0.95
384_Y	388_A	0.612	0.95
214_S	217_L	0.612	0.95
169_D	173_N	0.611	0.95
408_L	415_L	0.610	0.95
350_D	661_W	0.609	0.95
50_D	54_Q	0.608	0.95
27_L	30_F	0.608	0.95
357_M	536_Q	0.608	0.95
356_M	684_Y	0.607	0.95
93_R	97_T	0.607	0.95
433_K	436_W	0.606	0.95
143_S	179_D	0.606	0.95
432_G	438_N	0.605	0.95
392_S	530_T	0.604	0.95
489_S	494_G	0.604	0.95
309_S	315_K	0.603	0.95
535_A	654_A	0.603	0.95
69_R	82_T	0.602	0.95
157_D	161_Q	0.602	0.95
322_D	365_L	0.602	0.95
37_I	40_L	0.602	0.95
597_V	642_L	0.601	0.95
317_L	556_V	0.599	0.94
27_L	36_I	0.598	0.94
193_Y	199_Y	0.598	0.94
653_I	685_F	0.598	0.94
76_N	322_D	0.598	0.94
669_R	674_N	0.596	0.94
212_V	225_V	0.596	0.94
271_R	274_K	0.596	0.94
421_D	452_S	0.596	0.94
22_L	25_L	0.594	0.94
34_T	39_E	0.593	0.94
525_Q	528_T	0.593	0.94
145_E	148_Q	0.593	0.94
534_L	656_S	0.593	0.94
421_D	424_L	0.592	0.94
334_E	338_K	0.592	0.94
688_K	691_Q	0.592	0.94
597_V	602_T	0.592	0.94
31_V	35_W	0.591	0.94
410_T	463_V	0.590	0.94
42_I	45_I	0.590	0.94
538_V	594_F	0.590	0.94
143_S	180_M	0.590	0.94
193_Y	210_M	0.589	0.94
484_F	488_F	0.589	0.94
106_A	243_L	0.589	0.94
218_D	239_L	0.589	0.94
603_A	674_N	0.588	0.94
27_L	33_F	0.587	0.94
373_K	376_N	0.587	0.94
36_I	43_K	0.586	0.94
554_K	571_S	0.586	0.94
107_K	217_L	0.585	0.94
544_G	591_Q	0.584	0.94
686_E	689_S	0.584	0.94
93_R	105_I	0.584	0.94
279_Y	286_Q	0.583	0.94
27_L	31_V	0.582	0.94
277_L	284_L	0.581	0.93
331_K	334_E	0.581	0.93
67_V	86_L	0.580	0.93
285_L	291_K	0.580	0.93
32_I	39_E	0.580	0.93
243_L	248_S	0.580	0.93
451_S	617_K	0.579	0.93
367_M	389_M	0.579	0.93
29_A	32_I	0.578	0.93
518_L	525_Q	0.578	0.93
300_G	303_T	0.578	0.93
58_Q	61_S	0.577	0.93
536_Q	540_T	0.576	0.93
299_K	302_V	0.576	0.93
529_Y	533_E	0.575	0.93
132_T	139_K	0.575	0.93
376_N	384_Y	0.574	0.93
646_A	685_F	0.574	0.93
652_E	685_F	0.573	0.93
279_Y	284_L	0.573	0.93
293_E	299_K	0.572	0.93
39_E	46_V	0.572	0.93
199_Y	206_S	0.572	0.93
401_G	448_L	0.570	0.93
36_I	41_G	0.570	0.93
400_K	453_N	0.570	0.93
42_I	47_Q	0.569	0.93
95_K	190_D	0.569	0.93
182_I	217_L	0.569	0.93
302_V	306_K	0.569	0.93
624_F	640_T	0.568	0.93
156_D	160_Y	0.568	0.93
24_I	42_I	0.567	0.93
276_Y	279_Y	0.567	0.93
266_Y	269_N	0.567	0.93
641_T	658_V	0.566	0.93
642_L	677_G	0.566	0.93
551_Q	554_K	0.566	0.93
645_Y	681_M	0.565	0.93
36_I	44_Q	0.565	0.93
100_E	205_V	0.565	0.93
25_L	34_T	0.564	0.92
337_L	352_A	0.564	0.92
337_L	371_Q	0.564	0.92
207_A	243_L	0.563	0.92
306_K	310_E	0.563	0.92
352_A	659_V	0.563	0.92
193_Y	205_V	0.561	0.92
621_A	639_N	0.561	0.92
37_I	47_Q	0.561	0.92
539_S	543_N	0.560	0.92
213_V	217_L	0.560	0.92
615_A	693_K	0.560	0.92
393_Y	658_V	0.560	0.92
426_I	461_I	0.559	0.92
111_D	164_L	0.559	0.92
487_Y	586_Y	0.559	0.92
38_V	45_I	0.559	0.92
681_M	684_Y	0.559	0.92
279_Y	288_Q	0.558	0.92
26_F	33_F	0.557	0.92
29_A	33_F	0.557	0.92
51_Y	54_Q	0.557	0.92
668_Q	671_S	0.557	0.92
40_L	45_I	0.557	0.92
491_F	580_V	0.557	0.92
208_K	212_V	0.556	0.92
300_G	304_G	0.554	0.92
657_V	673_T	0.554	0.92
456_M	522_A	0.554	0.92
104_K	136_E	0.553	0.92
588_E	591_Q	0.553	0.92
464_G	482_D	0.551	0.92
184_A	226_T	0.550	0.92
408_L	413_I	0.550	0.92
336_K	675_E	0.550	0.92
107_K	214_S	0.549	0.91
674_N	678_R	0.545	0.91
160_Y	164_L	0.544	0.91
301_N	305_T	0.543	0.91
547_R	577_L	0.543	0.91
118_K	161_Q	0.542	0.91
27_L	34_T	0.542	0.91
488_F	493_L	0.542	0.91
30_F	33_F	0.542	0.91
608_A	611_S	0.541	0.91
669_R	673_T	0.541	0.91
603_A	607_L	0.540	0.91
359_P	647_P	0.540	0.91
143_S	146_R	0.540	0.91
532_L	550_P	0.538	0.91
215_E	238_L	0.538	0.91
493_L	537_Y	0.537	0.91
610_A	678_R	0.537	0.91
642_L	674_N	0.536	0.90
591_Q	595_R	0.536	0.90
598_A	607_L	0.536	0.90
586_Y	589_E	0.536	0.90
367_M	532_L	0.536	0.90
393_Y	660_P	0.534	0.90
281_Y	288_Q	0.534	0.90
418_V	443_G	0.533	0.90
100_E	214_S	0.532	0.90
152_K	156_D	0.532	0.90
198_Q	265_G	0.531	0.90
92_T	96_S	0.531	0.90
76_N	324_D	0.531	0.90
189_M	201_K	0.529	0.90
181_Q	184_A	0.529	0.90
27_L	38_V	0.529	0.90
129_W	150_E	0.529	0.90
547_R	550_P	0.529	0.90
137_A	141_I	0.528	0.90
150_E	157_D	0.527	0.90
33_F	36_I	0.527	0.90
88_A	314_G	0.527	0.90
410_T	413_I	0.526	0.90
74_D	80_I	0.525	0.90
190_D	203_E	0.525	0.90
161_Q	165_K	0.525	0.90
351_R	662_T	0.525	0.90
147_Q	152_K	0.524	0.89
147_Q	151_D	0.524	0.89
54_Q	57_K	0.524	0.89
30_F	37_I	0.524	0.89
105_I	119_K	0.522	0.89
155_S	158_D	0.522	0.89
590_V	594_F	0.522	0.89
50_D	53_N	0.520	0.89
30_F	48_G	0.520	0.89
583_K	587_I	0.520	0.89
609_S	612_Y	0.519	0.89
554_K	557_R	0.518	0.89
373_K	384_Y	0.517	0.89
399_V	402_A	0.517	0.89
640_T	659_V	0.516	0.89
326_Q	367_M	0.516	0.89
34_T	37_I	0.515	0.89
38_V	41_G	0.513	0.88
212_V	216_H	0.513	0.88
538_V	654_A	0.513	0.88
311_G	315_K	0.513	0.88
349_L	665_D	0.512	0.88
426_I	519_L	0.512	0.88
277_L	282_E	0.511	0.88
29_A	39_E	0.511	0.88
87_N	191_S	0.510	0.88
233_Y	262_L	0.510	0.88
416_N	445_Q	0.510	0.88
288_Q	292_V	0.509	0.88
218_D	238_L	0.508	0.88
276_Y	280_Q	0.508	0.88
280_Q	288_Q	0.508	0.88
132_T	137_A	0.508	0.88
429_D	519_L	0.505	0.88
532_L	535_A	0.504	0.88
183_L	196_T	0.503	0.88
497_T	533_E	0.503	0.88
272_V	276_Y	0.501	0.87
577_L	580_V	0.501	0.87
39_E	44_Q	0.501	0.87
361_N	548_M	0.500	0.87

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
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HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
4oonA	1	0.5237	100	0.215	Contact Map
3udfA	2	0.6858	100	0.237	Contact Map
2jchA	1	0.5321	100	0.244	Contact Map
3vmaA	1	0.8478	100	0.26	Contact Map
2olvA	1	0.8142	100	0.265	Contact Map
3zg9B	1	0.6243	100	0.406	Contact Map
2wadA	1	0.8226	100	0.423	Contact Map
3vskA	2	0.8561	100	0.454	Contact Map
4ye5A	1	0.7528	100	0.464	Contact Map
3equA	1	0.5936	100	0.481	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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