YQEZ - BACSU - GREMLIN Contacts

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YQEZ - Uncharacterized protein YqeZ

UniProt:	P54465	Sequences: MLQIKGFRAALLGIFLLSLLGVQLNAKAEKQTVYVIPVEKNVEQGLASFLSRSLQDAKDAHADHIILDINTPGGLVKSAIDMADLITESEIPVTAYVNKRALSAGAYIALQADHIYMAPGGKMGAAAIVDGQGNAADQKAQSLWLAEMEDAAVKNNRDPKYALAMADPDIDAKEVGAPKGDLLTLNADKAIEVGYSEGTADNLSTLVKKLGFEKAQISYAKESFAEKTARWLTNPVIVPILLTIAFLGLTVELFSPGVGLPGTAGLIALLLFFYGHLAAGLAGYETVLLFIAGVILILLEIFLPGGIIGLLGLGAIIASLFLAAGSFTVMAVSLLIASAVSITAFILLTRVLGKRMKFFKKLILNDSTNTESGYVSNQTRTDLMGKVGITFTPLRPSGTVIIDDERLDVVSEGSFTEKDKKVKVIKVEGSRIVVREI	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	437 (410)
Sequences:	960 (804)
Seq/√Len:	39.7

BACSU - YQEZ

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
64_H	94_T	7.035	1.00
400_V	409_V	6.260	1.00
95_A	112_A	5.148	1.00
423_K	435_R	5.147	1.00
82_M	108_I	5.006	1.00
420_K	436_E	3.957	1.00
390_T	416_T	3.936	1.00
50_L	82_M	3.815	1.00
38_V	42_V	3.800	1.00
239_P	319_S	3.765	1.00
149_E	163_L	3.689	1.00
69_I	95_A	3.670	1.00
125_A	171_D	3.569	1.00
402_I	424_V	3.533	1.00
388_G	402_I	3.530	1.00
36_I	53_S	3.407	1.00
192_E	195_Y	3.348	1.00
54_L	65_I	3.238	1.00
178_P	183_L	3.168	1.00
71_T	105_G	3.019	1.00
386_K	403_D	2.755	1.00
33_V	215_A	2.694	1.00
390_T	393_P	2.436	1.00
51_S	85_L	2.432	1.00
203_L	206_L	2.412	1.00
388_G	422_V	2.393	1.00
196_S	199_T	2.385	1.00
52_R	226_E	2.361	1.00
56_D	60_A	2.250	1.00
390_T	422_V	2.232	1.00
66_I	190_A	2.226	1.00
272_F	276_H	2.206	0.99
388_G	424_V	2.202	0.99
391_F	406_R	2.147	0.99
76_V	79_A	2.144	0.99
407_L	432_I	2.140	0.99
129_V	136_A	2.130	0.99
224_F	228_T	2.119	0.99
188_D	192_E	2.115	0.99
389_I	419_D	2.108	0.99
47_A	81_D	2.047	0.99
387_V	423_K	2.046	0.99
76_V	144_W	2.043	0.99
116_Y	198_G	2.008	0.99
110_L	162_A	1.981	0.99
68_D	98_N	1.961	0.99
251_V	254_F	1.957	0.99
390_T	419_D	1.957	0.99
252_E	262_G	1.905	0.98
109_A	123_M	1.899	0.98
393_P	418_K	1.876	0.98
127_A	169_D	1.861	0.98
102_L	143_L	1.828	0.98
106_A	165_M	1.816	0.98
393_P	417_E	1.778	0.97
387_V	421_K	1.760	0.97
417_E	420_K	1.756	0.97
293_G	309_G	1.741	0.97
161_Y	165_M	1.716	0.97
34_Y	62_A	1.700	0.97
390_T	394_L	1.691	0.97
122_K	171_D	1.656	0.96
303_L	308_I	1.620	0.96
292_A	296_L	1.616	0.96
388_G	400_V	1.609	0.95
426_K	433_V	1.606	0.95
223_S	226_E	1.599	0.95
127_A	135_A	1.589	0.95
293_G	297_I	1.586	0.95
94_T	196_S	1.575	0.95
250_T	254_F	1.574	0.95
135_A	138_Q	1.571	0.95
316_I	341_S	1.570	0.95
67_L	93_V	1.554	0.95
164_A	168_P	1.546	0.94
248_G	261_P	1.533	0.94
127_A	182_L	1.524	0.94
410_V	433_V	1.519	0.94
304_P	309_G	1.514	0.94
399_T	406_R	1.513	0.94
109_A	115_I	1.511	0.94
401_I	404_D	1.509	0.94
70_N	84_D	1.506	0.94
42_V	46_L	1.498	0.93
36_I	49_F	1.495	0.93
37_P	68_D	1.491	0.93
295_I	299_L	1.474	0.93
265_G	269_L	1.471	0.93
34_Y	60_A	1.441	0.92
70_N	99_K	1.434	0.92
413_G	436_E	1.431	0.92
399_T	408_D	1.429	0.92
238_V	245_A	1.428	0.92
164_A	183_L	1.424	0.91
35_V	66_I	1.411	0.91
83_A	111_Q	1.405	0.91
380_R	427_V	1.391	0.90
389_I	421_K	1.383	0.90
67_L	86_I	1.383	0.90
33_V	64_H	1.376	0.90
83_A	151_A	1.372	0.90
145_L	163_L	1.365	0.90
75_L	78_S	1.363	0.90
310_L	314_G	1.353	0.89
69_I	109_A	1.346	0.89
416_T	422_V	1.342	0.89
103_S	139_K	1.339	0.89
394_L	416_T	1.330	0.88
54_L	85_L	1.327	0.88
410_V	428_E	1.319	0.88
412_E	435_R	1.319	0.88
53_S	220_A	1.317	0.88
32_T	216_Q	1.303	0.87
79_A	83_A	1.296	0.87
68_D	219_Y	1.292	0.87
39_E	70_N	1.286	0.87
37_P	49_F	1.282	0.86
239_P	243_T	1.265	0.86
38_V	50_L	1.258	0.85
149_E	153_V	1.253	0.85
411_S	416_T	1.234	0.84
107_Y	127_A	1.226	0.84
48_S	225_A	1.224	0.84
184_T	199_T	1.212	0.83
236_V	333_S	1.208	0.83
58_K	89_S	1.203	0.83
16_L	61_H	1.201	0.83
263_T	296_L	1.195	0.82
161_Y	170_I	1.195	0.82
38_V	82_M	1.195	0.82
393_P	398_G	1.193	0.82
107_Y	148_M	1.183	0.82
114_H	196_S	1.177	0.81
382_D	404_D	1.174	0.81
106_A	123_M	1.172	0.81
256_P	261_P	1.171	0.81
305_G	308_I	1.163	0.80
249_L	253_L	1.155	0.80
113_D	203_L	1.149	0.80
410_V	431_R	1.146	0.79
50_L	67_L	1.141	0.79
400_V	422_V	1.136	0.79
144_W	148_M	1.136	0.79
394_L	398_G	1.133	0.79
390_T	418_K	1.132	0.79
390_T	411_S	1.127	0.78
58_K	90_E	1.126	0.78
79_A	144_W	1.121	0.78
53_S	65_I	1.120	0.78
243_T	247_L	1.116	0.78
87_T	155_N	1.107	0.77
242_L	276_H	1.104	0.77
80_I	100_R	1.104	0.77
169_D	179_K	1.102	0.77
87_T	111_Q	1.099	0.77
300_E	309_G	1.093	0.76
197_E	213_E	1.083	0.75
392_T	399_T	1.079	0.75
71_T	104_A	1.066	0.74
244_I	250_T	1.065	0.74
44_Q	75_L	1.061	0.74
142_S	184_T	1.060	0.74
228_T	232_L	1.054	0.73
190_A	290_F	1.053	0.73
127_A	141_Q	1.048	0.73
51_S	54_L	1.045	0.73
66_I	191_I	1.042	0.73
163_L	167_D	1.037	0.72
200_A	207_V	1.035	0.72
113_D	155_N	1.033	0.72
24_L	28_A	1.031	0.72
13_G	18_S	1.030	0.72
171_D	177_A	1.029	0.72
52_R	400_V	1.025	0.71
317_I	346_I	1.021	0.71
54_L	90_E	1.017	0.71
76_V	147_E	1.014	0.70
297_I	309_G	1.009	0.70
413_G	435_R	1.008	0.70
244_I	264_A	1.006	0.70
38_V	46_L	1.002	0.70
153_V	159_P	1.000	0.69
141_Q	145_L	0.995	0.69
106_A	126_A	0.994	0.69
248_G	256_P	0.991	0.69
402_I	409_V	0.989	0.69
251_V	296_L	0.989	0.69
71_T	103_S	0.987	0.68
111_Q	151_A	0.986	0.68
52_R	223_S	0.986	0.68
334_L	338_S	0.984	0.68
129_V	140_A	0.983	0.68
86_I	93_V	0.979	0.68
68_D	203_L	0.978	0.68
35_V	219_Y	0.975	0.67
47_A	85_L	0.973	0.67
97_V	129_V	0.968	0.67
355_R	359_F	0.966	0.67
102_L	182_L	0.962	0.66
158_D	161_Y	0.960	0.66
91_I	346_I	0.952	0.66
19_L	23_Q	0.950	0.65
148_M	162_A	0.945	0.65
289_L	315_A	0.943	0.65
32_T	218_S	0.943	0.65
95_A	109_A	0.938	0.64
258_V	262_G	0.934	0.64
31_Q	215_A	0.927	0.63
177_A	405_E	0.926	0.63
48_S	52_R	0.926	0.63
249_L	269_L	0.926	0.63
237_I	241_L	0.916	0.63
77_K	81_D	0.913	0.62
135_A	244_I	0.911	0.62
350_R	354_K	0.910	0.62
388_G	416_T	0.909	0.62
264_A	268_A	0.909	0.62
161_Y	172_A	0.906	0.62
247_L	250_T	0.905	0.62
425_I	435_R	0.904	0.62
149_E	245_A	0.904	0.62
197_E	212_F	0.900	0.61
145_L	167_D	0.895	0.61
128_I	141_Q	0.895	0.61
69_I	108_I	0.888	0.60
143_L	146_A	0.880	0.59
54_L	93_V	0.879	0.59
185_L	195_Y	0.879	0.59
111_Q	155_N	0.877	0.59
40_K	70_N	0.869	0.58
222_E	230_R	0.869	0.58
106_A	148_M	0.868	0.58
100_R	147_E	0.867	0.58
110_L	148_M	0.865	0.58
32_T	60_A	0.863	0.58
332_V	340_V	0.859	0.58
120_G	171_D	0.858	0.57
116_Y	193_V	0.858	0.57
106_A	172_A	0.857	0.57
382_D	403_D	0.857	0.57
162_A	166_A	0.857	0.57
125_A	139_K	0.857	0.57
294_V	298_L	0.853	0.57
193_V	196_S	0.848	0.57
97_V	318_A	0.847	0.56
325_G	330_M	0.846	0.56
428_E	433_V	0.845	0.56
366_D	381_T	0.844	0.56
19_L	22_V	0.844	0.56
67_L	95_A	0.841	0.56
390_T	398_G	0.839	0.56
239_P	272_F	0.838	0.56
91_I	191_I	0.838	0.56
43_E	230_R	0.837	0.56
102_L	127_A	0.831	0.55
355_R	358_F	0.830	0.55
345_F	349_T	0.830	0.55
94_T	114_H	0.830	0.55
394_L	420_K	0.829	0.55
413_G	429_G	0.828	0.55
263_T	292_A	0.824	0.54
292_A	315_A	0.823	0.54
395_R	408_D	0.823	0.54
237_I	264_A	0.822	0.54
13_G	22_V	0.822	0.54
238_V	265_G	0.821	0.54
336_I	341_S	0.817	0.54
55_Q	85_L	0.815	0.54
41_N	234_N	0.814	0.53
323_A	337_A	0.811	0.53
305_G	310_L	0.811	0.53
92_P	114_H	0.806	0.53
173_K	176_G	0.806	0.53
95_A	302_F	0.803	0.52
13_G	16_L	0.799	0.52
248_G	268_A	0.798	0.52
71_T	139_K	0.797	0.52
129_V	139_K	0.796	0.52
37_P	69_I	0.796	0.52
313_L	418_K	0.796	0.52
106_A	109_A	0.795	0.52
19_L	24_L	0.794	0.52
258_V	261_P	0.793	0.52
120_G	245_A	0.792	0.51
118_A	121_G	0.788	0.51
112_A	184_T	0.787	0.51
276_H	432_I	0.786	0.51
161_Y	182_L	0.785	0.51
267_I	311_L	0.784	0.51
80_I	143_L	0.782	0.51
275_G	279_A	0.781	0.50
90_E	418_K	0.780	0.50
246_F	250_T	0.780	0.50
107_Y	110_L	0.771	0.50
177_A	193_V	0.768	0.49
223_S	314_G	0.766	0.49
318_A	324_A	0.766	0.49
182_L	251_V	0.765	0.49
22_V	432_I	0.765	0.49
240_I	246_F	0.763	0.49
391_F	401_I	0.761	0.49
100_R	122_K	0.759	0.48
249_L	270_L	0.759	0.48
79_A	107_Y	0.758	0.48
172_A	293_G	0.756	0.48
49_F	240_I	0.755	0.48
150_D	244_I	0.755	0.48
334_L	350_R	0.753	0.48
31_Q	63_D	0.750	0.48
197_E	211_G	0.750	0.48
238_V	276_H	0.750	0.48
259_G	308_I	0.750	0.48
338_S	341_S	0.749	0.48
262_G	279_A	0.748	0.47
83_A	107_Y	0.747	0.47
98_N	407_L	0.744	0.47
172_A	180_G	0.744	0.47
86_I	267_I	0.740	0.47
104_A	139_K	0.738	0.47
15_F	24_L	0.735	0.46
260_L	264_A	0.734	0.46
159_P	383_L	0.734	0.46
79_A	147_E	0.732	0.46
394_L	409_V	0.731	0.46
102_L	147_E	0.729	0.46
100_R	143_L	0.729	0.46
209_K	227_K	0.728	0.46
36_I	273_F	0.725	0.45
181_D	188_D	0.722	0.45
178_P	181_D	0.719	0.45
116_Y	210_L	0.719	0.45
351_V	354_K	0.718	0.45
102_L	286_T	0.718	0.45
286_T	322_L	0.717	0.45
216_Q	317_I	0.716	0.45
224_F	286_T	0.715	0.44
241_L	268_A	0.714	0.44
26_A	348_L	0.713	0.44
103_S	129_V	0.713	0.44
198_G	209_K	0.713	0.44
240_I	244_I	0.712	0.44
249_L	313_L	0.711	0.44
152_A	166_A	0.711	0.44
130_D	134_N	0.709	0.44
23_Q	314_G	0.709	0.44
398_G	409_V	0.708	0.44
97_V	115_I	0.708	0.44
277_L	281_L	0.706	0.44
22_V	27_K	0.704	0.43
132_Q	267_I	0.704	0.43
63_D	216_Q	0.703	0.43
122_K	173_K	0.699	0.43
55_Q	59_D	0.698	0.43
202_N	207_V	0.698	0.43
297_I	344_A	0.698	0.43
229_A	279_A	0.692	0.42
259_G	296_L	0.692	0.42
43_E	123_M	0.691	0.42
219_Y	303_L	0.690	0.42
223_S	361_K	0.689	0.42
130_D	133_G	0.688	0.42
13_G	23_Q	0.687	0.42
54_L	67_L	0.685	0.42
54_L	91_I	0.682	0.42
395_R	413_G	0.681	0.41
44_Q	78_S	0.680	0.41
310_L	411_S	0.680	0.41
79_A	102_L	0.679	0.41
82_M	422_V	0.678	0.41
299_L	302_F	0.676	0.41
107_Y	144_W	0.674	0.41
33_V	66_I	0.673	0.41
35_V	217_I	0.672	0.41
342_I	410_V	0.671	0.41
242_L	265_G	0.670	0.40
346_I	350_R	0.669	0.40
71_T	74_G	0.669	0.40
91_I	422_V	0.668	0.40
245_A	262_G	0.667	0.40
220_A	402_I	0.666	0.40
71_T	125_A	0.666	0.40
252_E	257_G	0.664	0.40
65_I	222_E	0.662	0.40
122_K	255_S	0.661	0.40
294_V	348_L	0.659	0.39
365_N	382_D	0.658	0.39
120_G	127_A	0.657	0.39
106_A	162_A	0.656	0.39
354_K	357_K	0.656	0.39
427_V	431_R	0.654	0.39
40_K	97_V	0.654	0.39
97_V	285_E	0.653	0.39
71_T	129_V	0.653	0.39
319_S	323_A	0.653	0.39
121_G	186_N	0.649	0.39
125_A	184_T	0.649	0.39
141_Q	150_D	0.647	0.38
393_P	416_T	0.647	0.38
381_T	384_M	0.646	0.38
294_V	332_V	0.646	0.38
13_G	237_I	0.646	0.38
96_Y	343_T	0.645	0.38
237_I	260_L	0.644	0.38
313_L	383_L	0.644	0.38
17_L	24_L	0.642	0.38
27_K	216_Q	0.642	0.38
278_A	303_L	0.640	0.38
303_L	310_L	0.639	0.38
72_P	80_I	0.638	0.38
102_L	151_A	0.637	0.38
111_Q	122_K	0.637	0.38
105_G	129_V	0.636	0.37
217_I	227_K	0.635	0.37
389_I	392_T	0.635	0.37
318_A	323_A	0.634	0.37
120_G	154_K	0.633	0.37
54_L	58_K	0.633	0.37
46_L	230_R	0.632	0.37
407_L	430_S	0.630	0.37
65_I	90_E	0.629	0.37
110_L	309_G	0.629	0.37
87_T	154_K	0.626	0.37
388_G	396_P	0.625	0.37
26_A	294_V	0.625	0.37
239_P	262_G	0.624	0.36
97_V	250_T	0.624	0.36
25_N	28_A	0.623	0.36
396_P	416_T	0.621	0.36
86_I	298_L	0.620	0.36
68_D	302_F	0.620	0.36
70_N	429_G	0.617	0.36
40_K	234_N	0.614	0.36
165_M	252_E	0.614	0.36
347_L	351_V	0.613	0.36
105_G	108_I	0.613	0.36
12_L	28_A	0.611	0.35
25_N	389_I	0.611	0.35
66_I	96_Y	0.609	0.35
192_E	237_I	0.609	0.35
247_L	344_A	0.608	0.35
12_L	25_N	0.607	0.35
16_L	27_K	0.606	0.35
416_T	436_E	0.606	0.35
240_I	310_L	0.606	0.35
386_K	402_I	0.603	0.35
128_I	166_A	0.603	0.35
80_I	281_L	0.602	0.35
83_A	166_A	0.601	0.35
122_K	143_L	0.600	0.34
83_A	147_E	0.600	0.34
60_A	66_I	0.598	0.34
38_V	108_I	0.598	0.34
121_G	174_E	0.597	0.34
391_F	418_K	0.596	0.34
26_A	301_I	0.596	0.34
61_H	298_L	0.596	0.34
31_Q	361_K	0.595	0.34
129_V	166_A	0.595	0.34
12_L	22_V	0.593	0.34
72_P	100_R	0.593	0.34
22_V	28_A	0.591	0.34
43_E	233_T	0.591	0.34
293_G	302_F	0.591	0.34
218_S	292_A	0.590	0.34
397_S	410_V	0.590	0.34
22_V	217_I	0.589	0.34
392_T	396_P	0.589	0.34
263_T	267_I	0.589	0.34
404_D	423_K	0.588	0.33
96_Y	288_L	0.588	0.33
412_E	433_V	0.587	0.33
175_V	179_K	0.586	0.33
21_G	26_A	0.586	0.33
253_L	333_S	0.586	0.33
222_E	227_K	0.586	0.33
84_D	147_E	0.583	0.33
163_L	176_G	0.582	0.33
78_S	247_L	0.582	0.33
286_T	323_A	0.581	0.33
115_I	157_R	0.580	0.33
165_M	262_G	0.580	0.33
45_G	230_R	0.579	0.33
77_K	120_G	0.579	0.33
38_V	53_S	0.577	0.33
397_S	408_D	0.577	0.33
117_M	121_G	0.575	0.32
164_A	180_G	0.575	0.32
45_G	265_G	0.573	0.32
222_E	300_E	0.572	0.32
291_I	313_L	0.572	0.32
80_I	147_E	0.572	0.32
273_F	323_A	0.571	0.32
228_T	386_K	0.571	0.32
64_H	215_A	0.571	0.32
32_T	62_A	0.570	0.32
32_T	66_I	0.570	0.32
301_I	304_P	0.570	0.32
335_L	339_A	0.569	0.32
266_L	296_L	0.569	0.32
71_T	75_L	0.569	0.32
76_V	100_R	0.568	0.32
109_A	112_A	0.568	0.32
98_N	121_G	0.568	0.32
61_H	214_K	0.568	0.32
14_I	27_K	0.567	0.32
259_G	403_D	0.566	0.32
12_L	55_Q	0.566	0.32
364_L	408_D	0.565	0.32
116_Y	196_S	0.565	0.32
297_I	316_I	0.565	0.32
311_L	315_A	0.564	0.32
39_E	230_R	0.563	0.31
103_S	125_A	0.562	0.31
27_K	221_K	0.561	0.31
156_N	179_K	0.560	0.31
49_F	65_I	0.559	0.31
29_E	296_L	0.558	0.31
95_A	384_M	0.558	0.31
148_M	165_M	0.558	0.31
79_A	148_M	0.558	0.31
43_E	46_L	0.558	0.31
56_D	291_I	0.558	0.31
86_I	95_A	0.555	0.31
182_L	351_V	0.554	0.31
189_K	193_V	0.554	0.31
102_L	144_W	0.553	0.31
20_L	213_E	0.552	0.31
72_P	103_S	0.551	0.31
388_G	394_L	0.551	0.31
66_I	206_L	0.551	0.31
413_G	433_V	0.550	0.30
263_T	411_S	0.549	0.30
138_Q	179_K	0.549	0.30
40_K	113_D	0.548	0.30
92_P	177_A	0.548	0.30
409_V	432_I	0.547	0.30
37_P	287_V	0.546	0.30
22_V	29_E	0.545	0.30
283_G	363_I	0.544	0.30
398_G	416_T	0.543	0.30
233_T	242_L	0.542	0.30
228_T	278_A	0.542	0.30
217_I	424_V	0.541	0.30
240_I	264_A	0.540	0.30
394_L	422_V	0.540	0.30
125_A	146_A	0.540	0.30
200_A	295_I	0.540	0.30
167_D	424_V	0.539	0.30
263_T	311_L	0.539	0.30
277_L	284_Y	0.538	0.30
243_T	396_P	0.535	0.29
295_I	307_I	0.535	0.29
254_F	296_L	0.534	0.29
42_V	139_K	0.534	0.29
18_S	24_L	0.534	0.29
253_L	259_G	0.533	0.29
258_V	271_L	0.532	0.29
245_A	275_G	0.532	0.29
251_V	261_P	0.532	0.29
253_L	271_L	0.531	0.29
228_T	271_L	0.531	0.29
25_N	56_D	0.531	0.29
302_F	309_G	0.530	0.29
107_Y	162_A	0.529	0.29
229_A	274_Y	0.529	0.29
111_Q	166_A	0.529	0.29
100_R	252_E	0.528	0.29
202_N	217_I	0.526	0.29
246_F	294_V	0.526	0.29
115_I	201_D	0.526	0.29
55_Q	65_I	0.526	0.29
44_Q	319_S	0.525	0.29
14_I	26_A	0.525	0.29
264_A	278_A	0.523	0.28
106_A	154_K	0.522	0.28
212_F	215_A	0.520	0.28
126_A	129_V	0.520	0.28
296_L	300_E	0.520	0.28
49_F	319_S	0.520	0.28
274_Y	315_A	0.520	0.28
87_T	149_E	0.519	0.28
164_A	170_I	0.519	0.28
79_A	151_A	0.519	0.28
153_V	293_G	0.519	0.28
146_A	150_D	0.519	0.28
333_S	336_I	0.518	0.28
290_F	296_L	0.517	0.28
144_W	166_A	0.517	0.28
49_F	53_S	0.517	0.28
161_Y	167_D	0.517	0.28
59_D	221_K	0.517	0.28
63_D	208_K	0.516	0.28
246_F	249_L	0.516	0.28
186_N	190_A	0.516	0.28
252_E	256_P	0.514	0.28
145_L	184_T	0.514	0.28
126_A	248_G	0.513	0.28
106_A	161_Y	0.512	0.28
180_G	195_Y	0.512	0.28
157_R	197_E	0.512	0.28
248_G	269_L	0.511	0.28
127_A	138_Q	0.511	0.28
43_E	107_Y	0.510	0.27
254_F	274_Y	0.508	0.27
173_K	243_T	0.508	0.27
296_L	328_T	0.507	0.27
45_G	226_E	0.506	0.27
297_I	307_I	0.506	0.27
179_K	219_Y	0.506	0.27
53_S	62_A	0.505	0.27
66_I	231_W	0.504	0.27
14_I	19_L	0.504	0.27
41_N	245_A	0.501	0.27
121_G	151_A	0.501	0.27
234_N	354_K	0.500	0.27

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3vivA	2	0.476	100	0.755	Contact Map
4gm2A	3	0.3707	99.9	0.817	Contact Map
2f6iA	5	0.4027	99.9	0.829	Contact Map
3p2lA	4	0.3959	99.9	0.829	Contact Map
4jcqA	5	0.3799	99.8	0.832	Contact Map
1yg6A	4	0.405	99.8	0.832	Contact Map
4u0gA	4	0.4096	99.8	0.833	Contact Map
3qwdA	5	0.405	99.8	0.835	Contact Map
3bf0A	3	0.4645	99.8	0.835	Contact Map
2cbyA	3	0.3593	99.8	0.835	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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