YBXG - BACSU - GREMLIN Contacts

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YBXG - Uncharacterized transporter YbxG

UniProt:	P54425	Sequences: MANKELKRGLGARHIQMIALGGTIGVGLFMGSASTISWTGPSVLLAYAICGIFIFFIMRAMGEMLYVEPSTGSFATFGHQYIHPMAGYITAWSNWFQWIIVGMSEIIAVGSYTKYWFPDLPAWIPGIVAMVILGAANLISVKSFGEFEFWFAMIKIVTIILMIIAGIGIIFFGFGNGGDAIGLSNLWSHGGFFAGGFSGFFFALSLVIAAYQGVELIGITAGEAKDPQNTLRNAIQSIIWRILIFYIGAIFVIVTVYPWDELNSLGSPFVSTFSKIGITAAAGIINFVVITAAMSGCNSGIFSAGRMLYTLGVNGQAPKFFKKISRNGVPLYGTIAVLIGLAVGVVLNYIAPPKIFVYVYSASVLPGMIPWFIILISHIGFRKAKGAALDKHPFKMPFAPFTNYLTIAFLLMVLVGMWFNDDTRISLIVGVIFLALVVISYYVFGIGKRTQANLTKSEQAAE	Download Alignment We filter this alignment to remove sites that have many gaps before running GREMLIN. Date: 2015_01
Length:	462 (420)
Sequences:	24594 (15946)
Seq/√Len:	778.1

ECOLI - YIFK PROY ANSP AROP LYSP GABP MMUP PHEP FRLA CYCA ADIC PLAP PUUP POTE YCAM YGJI YJEM GADC YBAT ARCD CADB YJEH TNAB
BACSU - YBXG GABP YTNA YBGF ROCC AAPA HUTM YVBW YDGF ROCE YBEC ASPP YHDG YCGH STET ARCD YFNA YECA YDAO GERAB GERBB YNDE GERKB YFKT
HALSA - Q9HHU7 Q9HQB3 Q9HSL5
SULSO - Q7LXI7 Q97WS3 Q97X49 Q97Z63 Q97ZB5 Q97U05 Q97XM0 Q97WD4 Q97VA6 Q97VA8 Q97U33 Q97VR4 Q97Y76 Q97YX9 Q97YN3 Q97U39

GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:

i	j	Sco	Prob
134_G	338_L	4.365	1.00
320_F	332_Y	4.259	1.00
380_G	384_A	3.337	1.00
51_G	243_L	3.292	1.00
372_F	407_I	3.233	1.00
323_K	332_Y	3.125	1.00
229_N	233_N	3.074	1.00
11_G	225_K	2.833	1.00
224_A	230_T	2.792	1.00
75_A	314_N	2.784	1.00
166_G	252_V	2.671	1.00
91_A	311_L	2.669	1.00
226_D	229_N	2.652	1.00
312_G	322_K	2.632	1.00
16_Q	237_S	2.553	1.00
127_I	342_A	2.532	1.00
325_S	331_L	2.504	1.00
222_G	313_V	2.471	1.00
320_F	323_K	2.462	1.00
63_E	382_R	2.370	1.00
12_A	237_S	2.357	1.00
164_I	168_G	2.356	1.00
223_E	306_R	2.299	1.00
375_L	406_T	2.295	1.00
280_A	284_I	2.288	1.00
79_H	87_G	2.243	1.00
309_Y	313_V	2.227	1.00
335_I	339_I	2.208	1.00
12_A	230_T	2.188	1.00
135_A	139_I	2.172	1.00
134_G	334_T	2.130	1.00
131_V	342_A	2.125	1.00
142_K	146_E	2.101	1.00
15_I	224_A	2.074	1.00
12_A	16_Q	2.065	1.00
404_Y	408_A	2.029	1.00
138_L	331_L	2.027	1.00
439_I	443_V	2.026	1.00
271_S	274_S	1.998	1.00
233_N	237_S	1.997	1.00
16_Q	241_R	1.977	1.00
82_I	380_G	1.969	1.00
126_G	345_V	1.966	1.00
60_A	375_L	1.955	1.00
153_M	157_V	1.951	1.00
95_W	337_V	1.934	1.00
52_I	56_F	1.925	1.00
79_H	84_P	1.921	1.00
315_G	319_K	1.916	1.00
127_I	345_V	1.896	1.00
11_G	14_H	1.894	1.00
258_P	261_E	1.870	1.00
321_F	336_A	1.869	1.00
35_T	43_V	1.857	1.00
325_S	329_V	1.831	1.00
433_F	437_V	1.830	1.00
261_E	275_K	1.824	1.00
137_N	298_N	1.788	1.00
431_V	435_A	1.787	1.00
408_A	412_M	1.784	1.00
82_I	376_I	1.780	1.00
226_D	230_T	1.755	1.00
401_F	405_L	1.750	1.00
271_S	275_K	1.749	1.00
376_I	407_I	1.749	1.00
236_Q	240_W	1.743	1.00
106_I	297_C	1.720	1.00
102_G	341_L	1.719	1.00
14_H	149_F	1.712	1.00
78_G	90_T	1.708	1.00
46_A	203_A	1.692	1.00
90_T	373_I	1.688	1.00
131_V	338_L	1.687	1.00
130_M	341_L	1.679	1.00
42_S	200_F	1.662	1.00
19_A	238_I	1.653	1.00
432_I	436_L	1.650	1.00
157_V	161_L	1.613	1.00
327_N	331_L	1.612	1.00
83_H	86_A	1.602	1.00
10_L	14_H	1.596	1.00
138_L	335_I	1.594	1.00
121_P	124_I	1.590	1.00
53_F	409_F	1.564	1.00
92_W	437_V	1.556	1.00
113_T	125_P	1.553	1.00
56_F	405_L	1.526	1.00
240_W	244_I	1.524	1.00
309_Y	324_I	1.521	1.00
220_T	302_F	1.517	1.00
226_D	233_N	1.511	1.00
380_G	383_K	1.510	1.00
167_I	252_V	1.509	1.00
308_L	333_G	1.498	1.00
50_C	207_V	1.495	1.00
7_K	328_G	1.485	1.00
332_Y	336_A	1.469	1.00
58_M	239_I	1.463	1.00
274_S	282_A	1.462	1.00
139_I	327_N	1.449	1.00
265_L	271_S	1.431	1.00
120_L	124_I	1.431	1.00
158_T	288_V	1.427	1.00
106_I	130_M	1.426	1.00
265_L	268_P	1.421	1.00
78_G	373_I	1.420	1.00
52_I	405_L	1.417	1.00
319_K	323_K	1.417	1.00
304_A	337_V	1.416	1.00
130_M	338_L	1.410	1.00
71_T	222_G	1.410	1.00
156_I	160_I	1.398	1.00
109_V	290_I	1.390	1.00
127_I	131_V	1.389	1.00
376_I	380_G	1.388	1.00
134_G	335_I	1.380	1.00
319_K	322_K	1.372	1.00
227_P	232_R	1.366	1.00
305_G	334_T	1.357	1.00
274_S	279_T	1.351	1.00
244_I	248_G	1.346	1.00
10_L	15_I	1.340	1.00
60_A	403_N	1.337	1.00
30_M	108_A	1.335	1.00
436_L	439_I	1.332	1.00
82_I	86_A	1.331	1.00
443_V	446_I	1.329	1.00
283_G	287_F	1.327	1.00
42_S	193_F	1.320	1.00
14_H	145_G	1.320	1.00
67_V	392_H	1.316	1.00
58_M	235_I	1.313	1.00
323_K	331_L	1.311	1.00
109_V	129_A	1.310	1.00
230_T	233_N	1.307	1.00
68_E	80_Q	1.305	1.00
13_R	17_M	1.292	1.00
163_I	248_G	1.290	1.00
81_Y	377_S	1.283	1.00
12_A	233_N	1.266	1.00
44_L	251_F	1.263	1.00
435_A	439_I	1.258	1.00
398_F	402_T	1.246	1.00
57_I	375_L	1.238	1.00
59_R	236_Q	1.237	1.00
10_L	145_G	1.236	1.00
308_L	317_A	1.235	1.00
105_E	296_G	1.235	1.00
76_T	80_Q	1.231	1.00
23_T	242_I	1.231	1.00
372_F	411_L	1.228	1.00
430_G	434_L	1.226	1.00
379_I	404_Y	1.221	1.00
133_L	297_C	1.217	1.00
95_W	308_L	1.215	1.00
85_M	444_F	1.210	1.00
179_D	184_S	1.207	1.00
166_G	256_V	1.198	1.00
162_M	166_G	1.198	1.00
259_W	262_L	1.195	1.00
136_A	147_F	1.191	1.00
387_A	391_K	1.184	1.00
437_V	440_S	1.176	1.00
428_I	432_I	1.170	1.00
123_W	127_I	1.168	1.00
36_I	43_V	1.168	1.00
442_Y	446_I	1.165	1.00
15_I	234_A	1.162	1.00
401_F	404_Y	1.157	1.00
412_M	416_G	1.156	1.00
267_S	271_S	1.151	1.00
225_K	230_T	1.147	1.00
61_M	74_F	1.147	1.00
148_E	298_N	1.144	1.00
9_G	225_K	1.143	1.00
88_Y	92_W	1.138	1.00
19_A	217_I	1.133	1.00
78_G	86_A	1.129	1.00
124_I	128_V	1.128	1.00
147_F	151_F	1.126	1.00
18_I	220_T	1.122	1.00
138_L	329_V	1.118	1.00
70_S	76_T	1.118	1.00
75_A	310_T	1.116	1.00
429_V	432_I	1.114	1.00
313_V	322_K	1.105	1.00
161_L	165_A	1.104	1.00
398_F	401_F	1.100	1.00
339_I	343_V	1.100	1.00
20_L	241_R	1.097	1.00
411_L	415_V	1.097	1.00
386_G	392_H	1.092	1.00
146_E	150_W	1.087	1.00
181_I	184_S	1.084	1.00
324_I	328_G	1.082	1.00
432_I	439_I	1.075	1.00
65_L	77_F	1.071	1.00
196_G	199_G	1.069	1.00
63_E	66_Y	1.063	1.00
332_Y	335_I	1.059	1.00
390_D	393_P	1.057	1.00
128_V	132_I	1.054	1.00
407_I	411_L	1.051	1.00
440_S	443_V	1.049	1.00
399_A	403_N	1.044	1.00
400_P	404_Y	1.043	1.00
427_L	430_G	1.042	1.00
378_H	403_N	1.037	1.00
48_A	247_I	1.033	1.00
201_F	412_M	1.022	1.00
131_V	135_A	1.013	1.00
20_L	242_I	1.012	1.00
383_K	400_P	1.007	1.00
113_T	117_F	1.007	1.00
110_G	125_P	1.003	1.00
134_G	138_L	1.002	1.00
168_G	172_F	1.000	1.00
66_Y	393_P	0.999	1.00
440_S	444_F	0.992	1.00
437_V	441_Y	0.992	1.00
110_G	126_G	0.988	1.00
141_V	302_F	0.988	1.00
70_S	80_Q	0.984	1.00
163_I	167_I	0.983	1.00
160_I	164_I	0.977	1.00
221_A	231_L	0.976	1.00
113_T	290_I	0.974	1.00
156_I	245_F	0.973	1.00
67_V	390_D	0.972	1.00
24_I	27_G	0.970	1.00
183_L	186_L	0.969	1.00
215_E	219_I	0.967	1.00
182_G	186_L	0.966	1.00
151_F	295_S	0.963	1.00
375_L	407_I	0.959	1.00
438_V	442_Y	0.957	1.00
163_I	252_V	0.954	1.00
138_L	325_S	0.954	1.00
415_V	419_F	0.954	1.00
301_I	338_L	0.953	1.00
212_Q	367_G	0.952	1.00
372_F	376_I	0.950	1.00
56_F	402_T	0.947	1.00
190_G	194_A	0.944	1.00
17_M	149_F	0.943	1.00
133_L	298_N	0.942	1.00
325_S	328_G	0.934	1.00
132_I	294_M	0.922	1.00
237_S	241_R	0.911	1.00
44_L	254_V	0.906	1.00
104_S	360_Y	0.905	1.00
277_G	281_A	0.904	1.00
258_P	275_K	0.900	1.00
155_K	292_A	0.900	1.00
331_L	335_I	0.900	1.00
72_G	75_A	0.899	1.00
79_H	314_N	0.898	1.00
243_L	247_I	0.893	1.00
104_S	209_A	0.890	1.00
372_F	410_L	0.890	1.00
278_I	281_A	0.885	1.00
72_G	76_T	0.883	1.00
436_L	440_S	0.882	1.00
179_D	182_G	0.880	1.00
85_M	89_I	0.879	1.00
9_G	142_K	0.878	1.00
80_Q	385_K	0.877	1.00
45_L	200_F	0.875	1.00
51_G	211_Y	0.874	1.00
256_V	272_T	0.870	1.00
146_E	149_F	0.870	1.00
414_L	417_M	0.866	1.00
12_A	234_A	0.866	1.00
197_F	200_F	0.857	1.00
48_A	52_I	0.856	1.00
109_V	293_A	0.856	1.00
123_W	345_V	0.856	1.00
267_S	270_V	0.852	1.00
125_P	128_V	0.851	1.00
13_R	149_F	0.850	1.00
67_V	393_P	0.848	1.00
167_I	248_G	0.843	1.00
114_K	122_A	0.842	1.00
14_H	146_E	0.842	1.00
186_L	189_H	0.835	1.00
109_V	294_M	0.835	1.00
162_M	273_F	0.835	1.00
130_M	345_V	0.834	1.00
251_F	255_T	0.834	1.00
379_I	403_N	0.834	1.00
193_F	196_G	0.833	1.00
212_Q	371_W	0.833	1.00
107_I	359_V	0.832	1.00
317_A	321_F	0.828	1.00
170_I	255_T	0.827	1.00
279_T	283_G	0.826	1.00
180_A	183_L	0.826	1.00
78_G	377_S	0.823	1.00
338_L	342_A	0.822	1.00
385_K	390_D	0.822	1.00
92_W	317_A	0.821	1.00
263_N	268_P	0.819	1.00
216_L	303_S	0.818	1.00
186_L	190_G	0.817	1.00
55_F	59_R	0.815	1.00
56_F	60_A	0.814	1.00
387_A	392_H	0.812	1.00
321_F	332_Y	0.811	1.00
193_F	200_F	0.810	1.00
110_G	122_A	0.802	1.00
339_I	342_A	0.798	1.00
306_R	309_Y	0.795	1.00
170_I	173_G	0.793	1.00
135_A	138_L	0.791	1.00
133_L	301_I	0.791	1.00
57_I	410_L	0.789	1.00
86_A	373_I	0.787	1.00
101_V	363_S	0.786	1.00
432_I	435_A	0.785	1.00
432_I	437_V	0.785	1.00
412_M	415_V	0.784	1.00
55_F	236_Q	0.782	1.00
378_H	382_R	0.780	1.00
232_R	235_I	0.780	1.00
183_L	255_T	0.778	1.00
168_G	174_F	0.778	1.00
362_A	366_P	0.777	1.00
429_V	439_I	0.776	1.00
397_P	401_F	0.773	1.00
137_N	334_T	0.773	1.00
273_F	276_I	0.771	1.00
391_K	395_K	0.771	1.00
24_I	155_K	0.770	1.00
379_I	383_K	0.769	1.00
94_N	98_W	0.768	1.00
430_G	439_I	0.765	1.00
64_M	378_H	0.763	1.00
59_R	402_T	0.761	1.00
24_I	29_F	0.761	1.00
379_I	400_P	0.761	1.00
138_L	327_N	0.760	1.00
23_T	238_I	0.759	1.00
28_L	249_A	0.757	1.00
163_I	249_A	0.756	1.00
377_S	381_F	0.756	1.00
99_I	340_G	0.755	1.00
427_L	431_V	0.754	1.00
172_F	180_A	0.753	1.00
441_Y	445_G	0.751	1.00
399_A	402_T	0.750	1.00
431_V	434_L	0.748	1.00
71_T	309_Y	0.745	1.00
226_D	232_R	0.743	1.00
64_M	77_F	0.742	1.00
365_L	430_G	0.740	1.00
202_F	206_L	0.738	1.00
330_P	333_G	0.737	1.00
75_A	79_H	0.736	1.00
67_V	386_G	0.735	1.00
82_I	377_S	0.732	1.00
16_Q	234_A	0.730	1.00
428_I	431_V	0.728	1.00
139_I	143_S	0.727	1.00
110_G	113_T	0.723	1.00
35_T	39_T	0.722	1.00
366_P	370_P	0.721	1.00
83_H	445_G	0.719	1.00
190_G	193_F	0.719	1.00
301_I	305_G	0.717	1.00
392_H	395_K	0.717	1.00
180_A	184_S	0.716	1.00
427_L	432_I	0.716	1.00
45_L	48_A	0.713	1.00
56_F	406_T	0.713	1.00
222_G	309_Y	0.712	1.00
326_R	331_L	0.711	1.00
13_R	146_E	0.710	1.00
438_V	441_Y	0.708	1.00
119_D	122_A	0.708	1.00
305_G	333_G	0.706	1.00
413_V	417_M	0.706	1.00
25_G	29_F	0.705	1.00
45_L	49_I	0.704	1.00
406_T	410_L	0.703	1.00
133_L	294_M	0.701	1.00
54_I	214_V	0.699	1.00
81_Y	380_G	0.698	1.00
61_M	374_I	0.694	1.00
85_M	438_V	0.694	1.00
31_G	360_Y	0.692	1.00
137_N	302_F	0.692	1.00
439_I	442_Y	0.691	1.00
127_I	346_V	0.691	1.00
141_V	220_T	0.690	1.00
9_G	141_V	0.690	1.00
145_G	298_N	0.689	1.00
143_S	146_E	0.688	1.00
123_W	126_G	0.688	1.00
273_F	278_I	0.687	1.00
100_I	362_A	0.687	1.00
41_P	254_V	0.687	1.00
248_G	252_V	0.686	1.00
437_V	444_F	0.682	1.00
21_G	152_A	0.679	1.00
60_A	406_T	0.679	1.00
430_G	435_A	0.679	1.00
241_R	245_F	0.679	1.00
432_I	443_V	0.677	1.00
308_L	336_A	0.677	1.00
414_L	427_L	0.677	1.00
47_Y	210_A	0.676	1.00
396_M	402_T	0.676	1.00
44_L	48_A	0.675	1.00
433_F	440_S	0.674	1.00
396_M	399_A	0.673	1.00
179_D	183_L	0.672	1.00
32_S	250_I	0.672	1.00
321_F	333_G	0.671	1.00
268_P	273_F	0.669	1.00
145_G	149_F	0.669	1.00
43_V	250_I	0.663	1.00
129_A	297_C	0.663	1.00
58_M	214_V	0.662	1.00
105_E	297_C	0.661	1.00
199_G	202_F	0.660	1.00
237_S	240_W	0.660	1.00
103_M	359_V	0.660	1.00
320_F	336_A	0.660	1.00
249_A	253_I	0.659	1.00
435_A	438_V	0.658	1.00
101_V	104_S	0.654	1.00
186_L	191_G	0.653	1.00
112_Y	289_V	0.652	1.00
312_G	321_F	0.652	1.00
228_Q	393_P	0.651	1.00
97_Q	367_G	0.650	1.00
49_I	204_L	0.649	1.00
9_G	13_R	0.648	1.00
60_A	396_M	0.647	1.00
131_V	134_G	0.647	1.00
81_Y	381_F	0.647	1.00
324_I	327_N	0.647	1.00
382_R	386_G	0.645	1.00
386_G	390_D	0.645	1.00
212_Q	215_E	0.645	1.00
441_Y	444_F	0.645	1.00
430_G	436_L	0.643	1.00
75_A	91_A	0.642	1.00
201_F	416_G	0.641	1.00
75_A	87_G	0.641	1.00
59_R	397_P	0.640	1.00
115_Y	286_N	0.640	1.00
74_F	215_E	0.640	1.00
403_N	407_I	0.639	1.00
13_R	16_Q	0.638	1.00
65_L	231_L	0.638	1.00
390_D	395_K	0.638	1.00
223_E	324_I	0.638	1.00
429_V	433_F	0.636	1.00
116_W	286_N	0.636	1.00
188_S	191_G	0.635	1.00
93_S	370_P	0.634	1.00
106_I	110_G	0.634	1.00
101_V	105_E	0.634	1.00
22_G	299_S	0.632	1.00
434_L	437_V	0.631	1.00
383_K	386_G	0.630	1.00
116_W	287_F	0.629	1.00
154_I	158_T	0.629	1.00
189_H	192_F	0.628	1.00
252_V	255_T	0.626	1.00
440_S	445_G	0.626	1.00
113_T	129_A	0.624	1.00
186_L	192_F	0.623	1.00
191_G	194_A	0.620	1.00
218_G	235_I	0.620	1.00
98_W	300_G	0.620	1.00
231_L	235_I	0.619	1.00
223_E	330_P	0.617	1.00
306_R	324_I	0.617	1.00
25_G	246_Y	0.616	1.00
280_A	283_G	0.616	1.00
140_S	143_S	0.615	1.00
439_I	444_F	0.615	1.00
64_M	81_Y	0.615	1.00
130_M	342_A	0.615	1.00
65_L	218_G	0.614	1.00
103_M	344_G	0.612	1.00
62_G	66_Y	0.612	1.00
74_F	219_I	0.611	1.00
263_N	267_S	0.611	1.00
346_V	349_Y	0.610	1.00
157_V	160_I	0.610	1.00
34_S	357_V	0.610	1.00
44_L	247_I	0.609	1.00
400_P	403_N	0.608	1.00
382_R	399_A	0.605	1.00
292_A	295_S	0.605	1.00
219_I	303_S	0.605	1.00
439_I	445_G	0.605	1.00
154_I	288_V	0.603	1.00
108_A	112_Y	0.603	1.00
24_I	245_F	0.602	1.00
16_Q	19_A	0.601	1.00
22_G	300_G	0.599	1.00
406_T	409_F	0.598	1.00
132_I	136_A	0.598	1.00
304_A	308_L	0.598	1.00
224_A	231_L	0.597	1.00
336_A	340_G	0.596	1.00
17_M	152_A	0.595	1.00
138_L	334_T	0.594	1.00
241_R	244_I	0.593	1.00
381_F	392_H	0.591	1.00
26_V	209_A	0.591	1.00
227_P	230_T	0.590	1.00
433_F	436_L	0.590	1.00
38_W	202_F	0.589	1.00
433_F	439_I	0.587	1.00
272_T	276_I	0.585	1.00
93_S	369_I	0.584	1.00
134_G	301_I	0.584	1.00
387_A	390_D	0.584	1.00
210_A	246_Y	0.584	1.00
404_Y	407_I	0.580	1.00
158_T	284_I	0.580	1.00
99_I	337_V	0.580	1.00
105_E	293_A	0.579	1.00
24_I	31_G	0.579	1.00
287_F	291_T	0.579	1.00
20_L	152_A	0.578	1.00
50_C	208_I	0.577	1.00
435_A	442_Y	0.577	1.00
58_M	62_G	0.576	1.00
410_L	413_V	0.575	1.00
144_F	302_F	0.574	1.00
149_F	153_M	0.574	1.00
83_H	87_G	0.571	1.00
152_A	155_K	0.570	1.00
184_S	188_S	0.570	1.00
29_F	159_I	0.564	1.00
19_A	23_T	0.564	1.00
57_I	215_E	0.564	1.00
50_C	211_Y	0.563	1.00
170_I	252_V	0.563	1.00
212_Q	363_S	0.563	1.00
357_V	360_Y	0.563	1.00
241_R	248_G	0.563	1.00
114_K	118_P	0.562	1.00
379_I	407_I	0.562	1.00
415_V	418_W	0.562	1.00
78_G	87_G	0.560	1.00
90_T	370_P	0.560	1.00
30_M	33_A	0.559	1.00
143_S	147_F	0.559	1.00
368_M	410_L	0.559	1.00
8_R	225_K	0.557	1.00
41_P	44_L	0.554	1.00
35_T	207_V	0.554	1.00
105_E	108_A	0.551	1.00
365_L	414_L	0.550	1.00
73_S	218_G	0.550	1.00
268_P	276_I	0.547	1.00
228_Q	391_K	0.547	1.00
398_F	403_N	0.546	1.00
372_F	414_L	0.546	1.00
148_E	295_S	0.546	1.00
308_L	312_G	0.546	1.00
194_A	259_W	0.545	1.00
131_V	335_I	0.543	1.00
193_F	197_F	0.540	1.00
150_W	153_M	0.540	1.00
128_V	131_V	0.538	1.00
394_F	397_P	0.537	1.00
129_A	133_L	0.537	1.00
120_L	125_P	0.535	1.00
44_L	47_Y	0.535	1.00
301_I	334_T	0.534	1.00
103_M	341_L	0.534	1.00
93_S	97_Q	0.532	1.00
42_S	192_F	0.532	1.00
165_A	278_I	0.532	1.00
99_I	344_G	0.531	1.00
38_W	203_A	0.530	1.00
320_F	324_I	0.528	1.00
284_I	288_V	0.528	1.00
141_V	145_G	0.528	1.00
306_R	330_P	0.528	1.00
97_Q	366_P	0.528	1.00
67_V	381_F	0.527	1.00
228_Q	233_N	0.525	1.00
408_A	411_L	0.524	1.00
47_Y	250_I	0.524	1.00
18_I	21_G	0.523	1.00
215_E	371_W	0.522	1.00
35_T	203_A	0.521	1.00
297_C	300_G	0.520	1.00
223_E	309_Y	0.519	1.00
70_S	222_G	0.519	1.00
428_I	433_F	0.518	1.00
224_A	234_A	0.518	1.00
122_A	126_G	0.518	1.00
431_V	436_L	0.517	1.00
47_Y	246_Y	0.516	1.00
367_G	370_P	0.516	1.00
105_E	110_G	0.515	1.00
55_F	239_I	0.514	1.00
427_L	439_I	0.514	1.00
29_F	155_K	0.514	1.00
386_G	393_P	0.513	1.00
396_M	403_N	0.512	1.00
273_F	281_A	0.512	1.00
229_N	232_R	0.512	1.00
11_G	142_K	0.511	1.00
111_S	122_A	0.510	1.00
63_E	67_V	0.510	1.00
15_I	220_T	0.510	1.00
227_P	231_L	0.507	1.00
39_T	46_A	0.506	1.00
109_V	113_T	0.506	1.00
343_V	346_V	0.505	1.00
429_V	436_L	0.505	1.00
257_Y	261_E	0.504	1.00
34_S	37_S	0.503	1.00
129_A	294_M	0.503	1.00
19_A	22_G	0.502	1.00
13_R	153_M	0.501	1.00
116_W	290_I	0.500	1.00
154_I	291_T	0.500	1.00
62_G	235_I	0.500	1.00

Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Prob ≥ 0.7 are listed. For all 3L/2 predictions, click on one of the links below.

Sco = ((raw_sco - min_sco)/(avg_sco - min_sco))/2 + 0.5
Prob = P(contact | Sco, seq80/√len)
seq80 = effective number of sequences, after reducing redundancy to 80% identity

Text file of predictions (all 3L/2 predictions)
Generate restraints for ROSETTA Structure Modeling
Upload PDB model overlay contacts on the model

HHsearch Results:

Legend: GREMLIN results (Prob ≥ 0.7) overlaid on top PDB hits. The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on the top 10 (or top 20 if e-value < 1E-20) HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.

PDB	Chains	Cov	%	HHΔ
3l1lA	2	0.9026	100	0.253	Contact Map
4djkA	2	0.8874	100	0.332	Contact Map
3giaA	1	0.9177	100	0.334	Contact Map
3dh4A	3	0.9242	99	0.85	Contact Map
2xq2A	2	0.9264	99	0.852	Contact Map
2jlnA	1	0.9026	98.8	0.863	Contact Map
4wgvA	2	0.7771	97.8	0.895	Contact Map
4us3A	1	0.8333	97.8	0.895	Contact Map
2a65A	2	0.9264	97.7	0.897	Contact Map
4xp4A	1	0.9286	97.3	0.905	Contact Map

Sequence Conservation (Image Generated using WebLogo v3)

Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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